Protein pleiotropic regulatory locus
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14090 AT5G14090 |
| fragaria_vesca | FvH4_4g23460 FvH4_6g53810 |
| malus_domestica | MD09G1008500.v1.1 MD13G1122400.v1.1 MD16G1122900.v1.1 MD17G1002300.v1.1 |
| prunus_persica | Prupe.1G222800_v2.0.a1 Prupe.1G222800_v2.0.a1 Prupe.3G308500_v2.0.a1 Prupe.3G308500_v2.0.a1 |
| pyrus_communis | pycom111g00680 pycom16g10510 |
| rosa_chinensis | RchiOBHm_Chr4g0429831 |
| rosa_laevigata | RLG00000007040 RLG00000022367 |
| rosa_multiflora | Rmu_co8344809.1_g000001 Rmu_sc0006762.1_g000005 Rmu_sc0012106.1_g000002 Rmu_sc0018638.1_g000001 Rmu_sc0018801.1_g000006 Rmu_sc0037594.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00076940 Rroxscaffold_5G00371590 |
| rosa_rugosa | Rorug02G0588700 Rorug02G0588800 Rorug04G0238500 Rorug04G0238500 Rorug04G0238500 |
| rosa_samantha | Rh2AG668000 Rh2BG679500 Rh2CG642300 Rh2DG693000 Rh4AG294700 Rh4BG301100 Rh4CG316300 Rh4DG298000 |
| rosa_wichuraiana | Rw2G054760 Rw4G025500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 1003, 1774 |
| Acc36I | ACCTGC | 2 cut(s) | 608, 1563 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2035, 2107 |
| AccI | GTMKAC | 1 cut(s) | 1868 |
| AccII | CGCG | 2 cut(s) | 193, 366 |
| AccIII | TCCGGA | 1 cut(s) | 693 |
| AciI | CCGC | 5 cut(s) | 341, 945, 1637, 1972, 2146 |
| AclI | AACGTT | 1 cut(s) | 568 |
| AclWI | GGATC | 4 cut(s) | 685, 698, 736, 852 |
| AcsI | RAATTY | 5 cut(s) | 197, 1541, 1558, 2060, 2307 |
| AcuI | CTGAAG | 3 cut(s) | 419, 1089, 1867 |
| AcvI | CACGTG | 1 cut(s) | 1709 |
| AcyI | GRCGYC | 3 cut(s) | 1000, 1348, 1771 |
| AdeI | CACNNNGTG | 1 cut(s) | 2035 |
| AfaI | GTAC | 7 cut(s) | 274, 325, 1031, 1549, 1613, 1705, 2073 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 161, 431, 617, 1630, 1679, 2035, 2107 |
| AflII | CTTAAG | 1 cut(s) | 1645 |
| AflIII | ACRYGT | 2 cut(s) | 1706, 1708 |
| AgeI | ACCGGT | 1 cut(s) | 1258 |
| AhlI | ACTAGT | 1 cut(s) | 320 |
| AjnI | CCWGG | 3 cut(s) | 1389, 1414, 2249 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 999, 1031, 1683, 1715 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 219, 251 |
| AluBI | AGCT | 7 cut(s) | 12, 39, 721, 800, 1370, 1652, 2046 |
| AluI | AGCT | 7 cut(s) | 12, 39, 721, 800, 1370, 1652, 2046 |
| Alw21I | GWGCWC | 1 cut(s) | 1485 |
| Alw26I | GTCTC | 3 cut(s) | 38, 811, 885 |
| Alw44I | GTGCAC | 1 cut(s) | 1481 |
| AlwI | GGATC | 4 cut(s) | 685, 698, 736, 852 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 47, 281 |
| Aor13HI | TCCGGA | 1 cut(s) | 693 |
| AoxI | GGCC | 1 cut(s) | 497 |
| ApaLI | GTGCAC | 1 cut(s) | 1481 |
| ApeKI | GCWGC | 2 cut(s) | 215, 454 |
| ApoI | RAATTY | 5 cut(s) | 197, 1541, 1558, 2060, 2307 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1992, 2024 |
| AsiGI | ACCGGT | 1 cut(s) | 1258 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 439, 768, 1880 |
| AspLEI | GCGC | 2 cut(s) | 193, 1623 |
| AspS9I | GGNCC | 2 cut(s) | 422, 1633 |
| AsuHPI | GGTGA | 3 cut(s) | 1181, 2000, 2002 |
| AsuII | TTCGAA | 2 cut(s) | 238, 2064 |
| AvaII | GGWCC | 2 cut(s) | 422, 1633 |
| BaeGI | GKGCMC | 2 cut(s) | 1279, 1485 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1695, 1728 |
| BamHI | GGATCC | 1 cut(s) | 690 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1852, 1884 |
| BbrPI | CACGTG | 1 cut(s) | 1709 |
| Bbv12I | GWGCWC | 1 cut(s) | 1485 |
| BbvI | GCAGC | 2 cut(s) | 227, 466 |
| BceAI | ACGGC | 2 cut(s) | 486, 1566 |
| BciT130I | CCWGG | 3 cut(s) | 1391, 1416, 2251 |
| BciVI | GTATCC | 1 cut(s) | 2032 |
| BclI | TGATCA | 1 cut(s) | 1372 |
| BcoDI | GTCTC | 3 cut(s) | 38, 811, 885 |
| BcuI | ACTAGT | 1 cut(s) | 320 |
| BfaI | CTAG | 4 cut(s) | 321, 623, 1146, 1925 |
| BfmI | CTRYAG | 4 cut(s) | 426, 615, 1570, 1915 |
| BfoI | RGCGCY | 1 cut(s) | 1624 |
| BfrI | CTTAAG | 1 cut(s) | 1645 |
| BfuAI | ACCTGC | 2 cut(s) | 608, 1563 |
| BfuI | GTATCC | 1 cut(s) | 2032 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 549 |
| BisI | GCNGC | 4 cut(s) | 216, 342, 455, 2146 |
| BlsI | GCNGC | 4 cut(s) | 217, 343, 456, 2147 |
| Bme1390I | CCNGG | 3 cut(s) | 1391, 1416, 2251 |
| Bme18I | GGWCC | 2 cut(s) | 422, 1633 |
| BmgT120I | GGNCC | 2 cut(s) | 422, 1633 |
| BmiI | GGNNCC | 5 cut(s) | 692, 1218, 1420, 1634, 1635 |
| BmrFI | CCNGG | 3 cut(s) | 1391, 1416, 2251 |
| BmsI | GCATC | 5 cut(s) | 90, 1162, 1477, 1524, 1677 |
| BpmI | CTGGAG | 1 cut(s) | 2170 |
| Bpu14I | TTCGAA | 2 cut(s) | 238, 2064 |
| BpuEI | CTTGAG | 4 cut(s) | 742, 896, 2190, 2303 |
| BsaAI | YACGTR | 1 cut(s) | 1709 |
| BsaHI | GRCGYC | 3 cut(s) | 1000, 1348, 1771 |
| BsaJI | CCNNGG | 1 cut(s) | 303 |
| BsaWI | WCCGGW | 2 cut(s) | 693, 1258 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 161, 431, 617, 1630, 1679, 2035, 2107 |
| Bse118I | RCCGGY | 1 cut(s) | 1258 |
| Bse1I | ACTGG | 1 cut(s) | 1841 |
| Bse3DI | GCAATG | 2 cut(s) | 114, 1344 |
| BseAI | TCCGGA | 1 cut(s) | 693 |
| BseBI | CCWGG | 3 cut(s) | 1391, 1416, 2251 |
| BseDI | CCNNGG | 1 cut(s) | 303 |
| BseGI | GGATG | 5 cut(s) | 535, 592, 797, 958, 1668 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 161, 431, 617, 1630, 1679, 2035, 2107 |
| BseMI | GCAATG | 2 cut(s) | 114, 1344 |
| BseMII | CTCAG | 3 cut(s) | 54, 1175, 1463 |
| BseNI | ACTGG | 1 cut(s) | 1841 |
| BseRI | GAGGAG | 3 cut(s) | 947, 950, 1556 |
| BseSI | GKGCMC | 2 cut(s) | 1279, 1485 |
| BseXI | GCAGC | 2 cut(s) | 227, 466 |
| BseYI | CCCAGC | 1 cut(s) | 2267 |
| Bsh1236I | CGCG | 2 cut(s) | 193, 366 |
| BshFI | GGCC | 1 cut(s) | 499 |
| BshTI | ACCGGT | 1 cut(s) | 1258 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1485 |
| BsiSI | CCGG | 2 cut(s) | 694, 1259 |
| BslFI | GGGAC | 1 cut(s) | 1619 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 161, 431, 617, 1630, 1679, 2035, 2107 |
| BsmAI | GTCTC | 3 cut(s) | 38, 811, 885 |
| BsmFI | GGGAC | 1 cut(s) | 1619 |
| BsmI | GAATGC | 3 cut(s) | 71, 1720, 1822 |
| BsnI | GGCC | 1 cut(s) | 499 |
| Bsp119I | TTCGAA | 2 cut(s) | 238, 2064 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1279, 1485 |
| Bsp13I | TCCGGA | 1 cut(s) | 693 |
| Bsp143I | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| BspACI | CCGC | 5 cut(s) | 341, 945, 1637, 1972, 2146 |
| BspANI | GGCC | 1 cut(s) | 499 |
| BspCNI | CTCAG | 3 cut(s) | 53, 1174, 1464 |
| BspEI | TCCGGA | 1 cut(s) | 693 |
| BspFNI | CGCG | 2 cut(s) | 193, 366 |
| BspHI | TCATGA | 1 cut(s) | 412 |
| BspLI | GGNNCC | 5 cut(s) | 692, 1218, 1420, 1634, 1635 |
| BspMAI | CTGCAG | 2 cut(s) | 619, 1574 |
| BspMI | ACCTGC | 2 cut(s) | 608, 1563 |
| BspPI | GGATC | 4 cut(s) | 685, 698, 736, 852 |
| BspT104I | TTCGAA | 2 cut(s) | 238, 2064 |
| BspTI | CTTAAG | 1 cut(s) | 1645 |
| BsrDI | GCAATG | 2 cut(s) | 114, 1344 |
| BsrFI | RCCGGY | 1 cut(s) | 1258 |
| BsrI | ACTGG | 1 cut(s) | 1841 |
| BssAI | RCCGGY | 1 cut(s) | 1258 |
| BssECI | CCNNGG | 1 cut(s) | 303 |
| BssMI | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| BssNAI | GTATAC | 1 cut(s) | 1869 |
| BssNI | GRCGYC | 3 cut(s) | 1000, 1348, 1771 |
| BssT1I | CCWWGG | 1 cut(s) | 303 |
| Bst1107I | GTATAC | 1 cut(s) | 1869 |
| Bst2UI | CCWGG | 3 cut(s) | 1391, 1416, 2251 |
| Bst4CI | ACNGT | 6 cut(s) | 156, 277, 1036, 1487, 1805, 2008 |
| BstACI | GRCGYC | 3 cut(s) | 1000, 1348, 1771 |
| BstAFI | CTTAAG | 1 cut(s) | 1645 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 188, 1261 |
| BstBAI | YACGTR | 1 cut(s) | 1709 |
| BstBI | TTCGAA | 2 cut(s) | 238, 2064 |
| BstC8I | GCNNGC | 3 cut(s) | 105, 947, 1666 |
| BstDEI | CTNAG | 6 cut(s) | 40, 54, 89, 1161, 1331, 1472 |
| BstF5I | GGATG | 5 cut(s) | 535, 592, 797, 958, 1668 |
| BstFNI | CGCG | 2 cut(s) | 193, 366 |
| BstH2I | RGCGCY | 1 cut(s) | 1624 |
| BstHHI | GCGC | 2 cut(s) | 193, 1623 |
| BstKTI | GATC | 5 cut(s) | 418, 693, 731, 847, 1375 |
| BstMAI | GTCTC | 3 cut(s) | 38, 811, 885 |
| BstMBI | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 188, 549, 644, 1261, 1283 |
| BstNI | CCWGG | 3 cut(s) | 1391, 1416, 2251 |
| BstNSI | RCATGY | 1 cut(s) | 2087 |
| BstSCI | CCNGG | 3 cut(s) | 1389, 1414, 2249 |
| BstSFI | CTRYAG | 4 cut(s) | 426, 615, 1570, 1915 |
| BstSLI | GKGCMC | 2 cut(s) | 1279, 1485 |
| BstUI | CGCG | 2 cut(s) | 193, 366 |
| BstV1I | GCAGC | 2 cut(s) | 227, 466 |
| BstX2I | RGATCY | 1 cut(s) | 690 |
| BstYI | RGATCY | 1 cut(s) | 690 |
| BstZ17I | GTATAC | 1 cut(s) | 1869 |
| BsuI | GTATCC | 1 cut(s) | 2032 |
| BsuRI | GGCC | 1 cut(s) | 499 |
| BtsCI | GGATG | 5 cut(s) | 535, 592, 797, 958, 1668 |
| BtsI | GCAGTG | 1 cut(s) | 602 |
| BtsIMutI | CAGTG | 5 cut(s) | 344, 602, 1032, 1529, 1871 |
| BveI | ACCTGC | 2 cut(s) | 608, 1563 |
| Cac8I | GCNNGC | 3 cut(s) | 105, 947, 1666 |
| CaiI | CAGNNNCTG | 2 cut(s) | 47, 281 |
| CciI | TCATGA | 1 cut(s) | 412 |
| CfoI | GCGC | 2 cut(s) | 193, 1623 |
| Cfr10I | RCCGGY | 1 cut(s) | 1258 |
| Cfr13I | GGNCC | 2 cut(s) | 422, 1633 |
| CseI | GACGC | 2 cut(s) | 372, 1337 |
| Csp6I | GTAC | 7 cut(s) | 273, 324, 1030, 1548, 1612, 1704, 2072 |
| CspAI | ACCGGT | 1 cut(s) | 1258 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1216, 1251 |
| CviQI | GTAC | 7 cut(s) | 273, 324, 1030, 1548, 1612, 1704, 2072 |
| DdeI | CTNAG | 6 cut(s) | 40, 54, 89, 1161, 1331, 1472 |
| DpnI | GATC | 5 cut(s) | 417, 692, 730, 846, 1374 |
| DpnII | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| DraI | TTTAAA | 1 cut(s) | 232 |
| DraIII | CACNNNGTG | 1 cut(s) | 2035 |
| Eco130I | CCWWGG | 1 cut(s) | 303 |
| Eco32I | GATATC | 1 cut(s) | 1954 |
| Eco47I | GGWCC | 2 cut(s) | 422, 1633 |
| Eco57I | CTGAAG | 3 cut(s) | 419, 1089, 1867 |
| Eco72I | CACGTG | 1 cut(s) | 1709 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1633 |
| EcoRI | GAATTC | 3 cut(s) | 197, 1558, 2060 |
| EcoRII | CCWGG | 3 cut(s) | 1389, 1414, 2249 |
| EcoRV | GATATC | 1 cut(s) | 1954 |
| EcoT14I | CCWWGG | 1 cut(s) | 303 |
| EcoT22I | ATGCAT | 4 cut(s) | 82, 667, 1517, 1822 |
| ErhI | CCWWGG | 1 cut(s) | 303 |
| FaqI | GGGAC | 1 cut(s) | 1619 |
| FauI | CCCGC | 2 cut(s) | 938, 1644 |
| FauNDI | CATATG | 1 cut(s) | 667 |
| FbaI | TGATCA | 1 cut(s) | 1372 |
| FblI | GTMKAC | 1 cut(s) | 1868 |
| Fnu4HI | GCNGC | 4 cut(s) | 216, 342, 455, 2146 |
| FokI | GGATG | 5 cut(s) | 542, 599, 804, 965, 1655 |
| Fsp4HI | GCNGC | 4 cut(s) | 216, 342, 455, 2146 |
| FspBI | CTAG | 4 cut(s) | 321, 623, 1146, 1925 |
| GlaI | GCGC | 2 cut(s) | 192, 1622 |
| GluI | GCNGC | 4 cut(s) | 216, 342, 455, 2146 |
| GsaI | CCCAGC | 1 cut(s) | 2271 |
| GsuI | CTGGAG | 1 cut(s) | 2170 |
| HaeII | RGCGCY | 1 cut(s) | 1624 |
| HaeIII | GGCC | 1 cut(s) | 499 |
| HapII | CCGG | 2 cut(s) | 694, 1259 |
| HgaI | GACGC | 2 cut(s) | 372, 1337 |
| HhaI | GCGC | 2 cut(s) | 193, 1623 |
| Hin1I | GRCGYC | 3 cut(s) | 1000, 1348, 1771 |
| Hin6I | GCGC | 2 cut(s) | 191, 1621 |
| HinP1I | GCGC | 2 cut(s) | 191, 1621 |
| HincII | GTYRAC | 2 cut(s) | 73, 970 |
| HindII | GTYRAC | 2 cut(s) | 73, 970 |
| HindIII | AAGCTT | 1 cut(s) | 719 |
| HpaI | GTTAAC | 1 cut(s) | 73 |
| HpaII | CCGG | 2 cut(s) | 694, 1259 |
| HphI | GGTGA | 3 cut(s) | 1181, 2000, 2002 |
| Hpy166II | GTNNAC | 8 cut(s) | 73, 326, 970, 1032, 1483, 1706, 1869, 2072 |
| Hpy188I | TCNGA | 8 cut(s) | 43, 288, 318, 1297, 1473, 1537, 1896, 2188 |
| Hpy8I | GTNNAC | 8 cut(s) | 73, 326, 970, 1032, 1483, 1706, 1869, 2072 |
| Hpy99I | CGWCG | 5 cut(s) | 747, 1005, 1353, 1773, 1776 |
| HpyAV | CCTTC | 7 cut(s) | 128, 758, 825, 1579, 1854, 2060, 2312 |
| HpyCH4III | ACNGT | 6 cut(s) | 156, 277, 1036, 1487, 1805, 2008 |
| HpyCH4IV | ACGT | 5 cut(s) | 568, 745, 1000, 1708, 1771 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 188, 549, 644, 1261, 1283 |
| HpyF3I | CTNAG | 6 cut(s) | 40, 54, 89, 1161, 1331, 1472 |
| HpySE526I | ACGT | 5 cut(s) | 568, 745, 1000, 1708, 1771 |
| Hsp92I | GRCGYC | 3 cut(s) | 1000, 1348, 1771 |
| HspAI | GCGC | 2 cut(s) | 191, 1621 |
| KflI | GGGWCCC | 1 cut(s) | 1633 |
| Kpn2I | TCCGGA | 1 cut(s) | 693 |
| Ksp22I | TGATCA | 1 cut(s) | 1372 |
| KspAI | GTTAAC | 1 cut(s) | 73 |
| Kzo9I | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| LmnI | GCTCC | 3 cut(s) | 17, 305, 797 |
| Lsp1109I | GCAGC | 2 cut(s) | 227, 466 |
| LweI | GCATC | 5 cut(s) | 90, 1162, 1477, 1524, 1677 |
| MaeI | CTAG | 4 cut(s) | 321, 623, 1146, 1925 |
| MaeII | ACGT | 5 cut(s) | 568, 745, 1000, 1708, 1771 |
| MaeIII | GTNAC | 1 cut(s) | 2008 |
| MalI | GATC | 5 cut(s) | 417, 692, 730, 846, 1374 |
| MboI | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| MfeI | CAATTG | 1 cut(s) | 704 |
| MflI | RGATCY | 1 cut(s) | 690 |
| MhlI | GDGCHC | 2 cut(s) | 1279, 1485 |
| MlyI | GAGTC | 2 cut(s) | 149, 887 |
| MmeI | TCCRAC | 2 cut(s) | 769, 2049 |
| Mph1103I | ATGCAT | 4 cut(s) | 82, 667, 1517, 1822 |
| MroI | TCCGGA | 1 cut(s) | 693 |
| MroXI | GAANNNNTTC | 3 cut(s) | 439, 768, 1880 |
| MseI | TTAA | 8 cut(s) | 72, 231, 813, 1646, 1800, 1932, 2214, 2327 |
| MslI | CAYNNNNRTG | 4 cut(s) | 411, 666, 867, 1406 |
| MspA1I | CMGCKG | 1 cut(s) | 2148 |
| MspCI | CTTAAG | 1 cut(s) | 1645 |
| MspI | CCGG | 2 cut(s) | 694, 1259 |
| MspR9I | CCNGG | 3 cut(s) | 1391, 1416, 2251 |
| MunI | CAATTG | 1 cut(s) | 704 |
| Mva1269I | GAATGC | 3 cut(s) | 71, 1720, 1822 |
| MvaI | CCWGG | 3 cut(s) | 1391, 1416, 2251 |
| MvnI | CGCG | 2 cut(s) | 193, 366 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 188, 549, 644, 1261, 1283 |
| NdeI | CATATG | 1 cut(s) | 667 |
| NdeII | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| NlaIV | GGNNCC | 5 cut(s) | 692, 1218, 1420, 1634, 1635 |
| NmuCI | GTSAC | 1 cut(s) | 2008 |
| NsiI | ATGCAT | 4 cut(s) | 82, 667, 1517, 1822 |
| NspI | RCATGY | 1 cut(s) | 2087 |
| NspV | TTCGAA | 2 cut(s) | 238, 2064 |
| PagI | TCATGA | 1 cut(s) | 412 |
| PctI | GAATGC | 3 cut(s) | 71, 1720, 1822 |
| PdmI | GAANNNNTTC | 3 cut(s) | 439, 768, 1880 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2035, 2107 |
| PfoI | TCCNGGA | 2 cut(s) | 1389, 1414 |
| PinAI | ACCGGT | 1 cut(s) | 1258 |
| PkrI | GCNGC | 4 cut(s) | 217, 343, 456, 2147 |
| PleI | GAGTC | 2 cut(s) | 148, 886 |
| PmaCI | CACGTG | 1 cut(s) | 1709 |
| PmlI | CACGTG | 1 cut(s) | 1709 |
| PpsI | GAGTC | 2 cut(s) | 148, 886 |
| Ppu21I | YACGTR | 1 cut(s) | 1709 |
| PpuMI | RGGWCCY | 1 cut(s) | 1633 |
| Psp1406I | AACGTT | 1 cut(s) | 568 |
| Psp5II | RGGWCCY | 1 cut(s) | 1633 |
| Psp6I | CCWGG | 3 cut(s) | 1389, 1414, 2249 |
| PspCI | CACGTG | 1 cut(s) | 1709 |
| PspFI | CCCAGC | 1 cut(s) | 2267 |
| PspGI | CCWGG | 3 cut(s) | 1389, 1414, 2249 |
| PspN4I | GGNNCC | 5 cut(s) | 692, 1218, 1420, 1634, 1635 |
| PspPI | GGNCC | 2 cut(s) | 422, 1633 |
| PspPPI | RGGWCCY | 1 cut(s) | 1633 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 256, 288 |
| PstI | CTGCAG | 2 cut(s) | 619, 1574 |
| PstNI | CAGNNNCTG | 2 cut(s) | 47, 281 |
| PsuI | RGATCY | 1 cut(s) | 690 |
| RsaI | GTAC | 7 cut(s) | 274, 325, 1031, 1549, 1613, 1705, 2073 |
| RsaNI | GTAC | 7 cut(s) | 273, 324, 1030, 1548, 1612, 1704, 2072 |
| RseI | CAYNNNNRTG | 4 cut(s) | 411, 666, 867, 1406 |
| SaqAI | TTAA | 8 cut(s) | 72, 231, 813, 1646, 1800, 1932, 2214, 2327 |
| SatI | GCNGC | 4 cut(s) | 216, 342, 455, 2146 |
| Sau3AI | GATC | 5 cut(s) | 415, 690, 728, 844, 1372 |
| Sau96I | GGNCC | 2 cut(s) | 422, 1633 |
| SchI | GAGTC | 2 cut(s) | 149, 887 |
| ScrFI | CCNGG | 3 cut(s) | 1391, 1416, 2251 |
| SduI | GDGCHC | 2 cut(s) | 1279, 1485 |
| SfaNI | GCATC | 5 cut(s) | 90, 1162, 1477, 1524, 1677 |
| SfcI | CTRYAG | 4 cut(s) | 426, 615, 1570, 1915 |
| SfuI | TTCGAA | 2 cut(s) | 238, 2064 |
| SinI | GGWCC | 2 cut(s) | 422, 1633 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 411, 666, 867, 1406 |
| SmlI | CTYRAG | 5 cut(s) | 757, 875, 1645, 2205, 2282 |
| SmoI | CTYRAG | 5 cut(s) | 757, 875, 1645, 2205, 2282 |
| SpeI | ACTAGT | 1 cut(s) | 320 |
| SsiI | CCGC | 5 cut(s) | 341, 945, 1637, 1972, 2146 |
| SspI | AATATT | 1 cut(s) | 2106 |
| SspMI | CTAG | 4 cut(s) | 321, 623, 1146, 1925 |
| StyD4I | CCNGG | 3 cut(s) | 1389, 1414, 2249 |
| StyI | CCWWGG | 1 cut(s) | 303 |
| TaaI | ACNGT | 6 cut(s) | 156, 277, 1036, 1487, 1805, 2008 |
| TaiI | ACGT | 5 cut(s) | 571, 748, 1003, 1711, 1774 |
| TaqI | TCGA | 6 cut(s) | 143, 238, 883, 1003, 2064, 2222 |
| TaqII | GACCGA | 1 cut(s) | 246 |
| TatI | WGTACW | 2 cut(s) | 323, 2071 |
| TauI | GCSGC | 2 cut(s) | 344, 2148 |
| Tru1I | TTAA | 8 cut(s) | 72, 231, 813, 1646, 1800, 1932, 2214, 2327 |
| Tru9I | TTAA | 8 cut(s) | 72, 231, 813, 1646, 1800, 1932, 2214, 2327 |
| TscAI | CASTG | 5 cut(s) | 351, 602, 1039, 1529, 1878 |
| TseFI | GTSAC | 1 cut(s) | 2008 |
| TseI | GCWGC | 2 cut(s) | 215, 454 |
| Tsp45I | GTSAC | 1 cut(s) | 2008 |
| TspGWI | ACGGA | 2 cut(s) | 343, 1521 |
| TspRI | CASTG | 5 cut(s) | 351, 602, 1039, 1529, 1878 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2035, 2107 |
| Vha464I | CTTAAG | 1 cut(s) | 1645 |
| VneI | GTGCAC | 1 cut(s) | 1481 |
| VpaK11BI | GGWCC | 2 cut(s) | 422, 1633 |
| XapI | RAATTY | 5 cut(s) | 197, 1541, 1558, 2060, 2307 |
| XbaI | TCTAGA | 1 cut(s) | 1145 |
| XceI | RCATGY | 1 cut(s) | 2087 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2032 |
| XmiI | GTMKAC | 1 cut(s) | 1868 |
| XmnI | GAANNNNTTC | 3 cut(s) | 439, 768, 1880 |
| XspI | CTAG | 4 cut(s) | 321, 623, 1146, 1925 |
| ZraI | GACGTC | 2 cut(s) | 1001, 1772 |
| Zsp2I | ATGCAT | 4 cut(s) | 82, 667, 1517, 1822 |