Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0003384

Physical Location & Seq

Genomic Coordinates Forward (+)

15243446 .. 15246750

Gene Structure 3305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g18170.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGCGCCTTGGAAGTAGGACTCTATTCCACCCCAAACCCCACACCGCCGCCGAACTCGGAGACATCCTCCTGGTGGCCTCCATCACCAAGACTCTCTCCCAGTCCGGCACCCGCAACCTCCCTCAGCCCCTCCCTCTCACCGAGCCTCTCCTCCTCCAAATCCTCCGCACCCAATCCCTCCACCCTTCCAAAAAACTCGACTTCTTCAAATGGTGCTCCCTCACCCACTCCATCCCACCCTCCCCACGCGCCTTCTCCCACGTCCTCCACACCGCCTGCCGCGCCGGGTTTCTCGCCGAAATCCCCGAGCTACTCACCATCATGAGGAGGGATTCTCTAGCCGTGGATTCCGGGACCTTCAAGTCCCTCCTGGACGCATTCATAAGGGAAGGTAAGTTCGACATGGCGATTGAGATTTTGGATACAATGCAAGAAGTAAATGCTGAGTTGAATGCTGATATGTACAACTCGGTGTTGGTTGCTTTGGTTCGGAAGGGTCAGTTGCGTTTGGCTATGTCGATCTTGGTTAGGCTTTTAGAAGGAGGGTCTTGTGACCAGGTACCCAGTTGCATTGCCTGCAATGAGTTGCTGGTGGGTCTTAGGAAGGGTGACATGAGGGTGGAGTTTAAGCAAGTGTATGATAAGCTTAGGGGGAATGAGTGGTTTGAGATGGATACTTGGGGGTATAATATATGTATTCATGCATTTGGGTGTTGGGGTGATTTGGGTACTAGTTTGAGTTTGTTTAAGGAGATGAAGGACTTGAATTCGGACTCGGTTTTTCCTGATTTGTCTACTTATAATAGCCTCATTCATGTGCTGTGCTTGGTTGGGAAGGTGGATGATGCAATTACTGTGTGGGAGGAGTTGAAGTGCTCTGGTCATGAGCCGGATGCCATTACGTATCGGATTCTTATTCAGGGGTGTTGTAAGTGTTATAGAATAGAGGAAGCTACTAGGATTTTTAGTGAGATGCAGAACAATGGGTACAATCCGGATACTGTTGTTTATAATTCTTTGATAGATGGGTTGTTCAAGGCAAGGAAAGTTAATGAAGGCTGTCAGATGTTTGAGAGGATGATTCAGTATGGGGTGAGAGCCTCGACATGGACGTATAATATTCTGATTGATGGGTTGTTTAGGAATGCAAGGGCCGAGGCTGCTTACACCCTATTTTGTGACTTGAAGAAGAAGGGTCAGTTTGTGGATGGTGTTACTTACAGCATTGTTGTTCTGCAACTTTGTAGGGAGGGTCTACTTGAGGAGGCTCTAGGATTGGCAGAAGAAATGGAAATGCGAGGCTTTACTGTTGATTTGGTTACTATATCAACACTCATAATTAGTCTGTATAAGCATAGTCGATGGGATTGGACTGACAAGCTCATGAAGCGTATTAGGGATGGTAATCTGCTGCCTAGTGTTCTGAAATGGAAAGTCGATATGGAAGCTACATTGAAATCCCCGCAAAAAAATAAAAAGGACCATACACCACTTTTCCCAAGTAATGGTGACTTCAGTGACGTTTTGAGTCTCATAAGCTCTGTTGCCTCGACGATGGATGGAGGCTTTGAGACAGATGATGCTGGAGTTAAAGATGATAAGAATTCGTCTACACCTATTGATCAGTGGTCATCATCTCCTCATATGGATCAGCTGGCCAATCAAATCACGTCCACTGACCAGTCTTCTCAGCAGTTTTCACTGTCTAGAGGGCAACGAGTTCAAGCCAAAGGGGATGACACTTTTGATATTGATATGGTAAATACTTTCTTGTCCCTATTTTTGGCCAAGGGGAAGCTGAGCATGGCTTGCAAATTGTTTGAGATTTTCAGTGATACAGGTGCAAACCCTGTGAGCTACACTTATAATTCCATCTTGAGTTCGTTTGTCAAGAAGGGCTACTTCAATGAAGCATGGGGTGTACTCAGTGAAATGGGAGAAAAAGTTTGCCCCACAGATATAGCAACATACAATATGATAATTCAAGGCTTGGGGAAGATGGGAAGAGCTGATCTAGCCAGTAGTGTTCTGGATAAGCTAATGAAGCAGGGTGGTTACCTTGATGTAGTCATGTACAACACCTTGATTAATGCTTTGGGGAAGGCTAACCGGATTGACGAAGTAAACAAGCTATTTAAGCAGATGAAGAGTAGTGGAATAAATCCTGATGTTGTCACCTTCAATACACTCATTGAAGTTCATAGTAAAGCAGGTCGTCTGAAAGACGCGTATAAGTTTCTGAAAATGATGCTGGACTCAGGCTGCATACCAAACCATGTCACTGACACCACTTTGGATTTTCTGGGGAAGGAGATTGAAAAATCAAGGTACCAAAAGGCATCATTTGTACGAAATAAGGATGACTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

790

Amino Acids

88.47

Weight (kDa)

6.12

Isoelectric Point (pI)

30.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	87 - 175	9.5e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	253 - 309	6.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	260 - 290	6.4e-09	PPR repeat
PPR_2	PF13041	262 - 311	3.3e-16	PPR repeat family
PPR_1	PF12854	294 - 326	1.1e-09	PPR repeat
PPR	PF01535	300 - 329	3.3e-06	PPR repeat
PPR_2	PF13041	304 - 335	8.7e-06	PPR repeat family
PPR_3	PF13812	320 - 377	4.6e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	328 - 360	8.8e-09	PPR repeat
PPR_2	PF13041	332 - 380	3.4e-14	PPR repeat family
PPR	PF01535	335 - 365	4.2e-06	PPR repeat
PPR_2	PF13041	369 - 416	7.2e-11	PPR repeat family
PPR_2	PF13041	618 - 666	1.1e-11	PPR repeat family
PPR_3	PF13812	675 - 734	1.5e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	687 - 716	5e-07	PPR repeat
PPR_2	PF13041	688 - 731	1.8e-15	PPR repeat family
PPR	PF01535	690 - 720	3e-08	PPR repeat
PPR_3	PF13812	710 - 761	1.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	719 - 750	5.1e-10	PPR repeat
PPR_2	PF13041	722 - 765	9.8e-12	PPR repeat family
PPR	PF01535	725 - 755	3.1e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003384)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01570
fragaria_vesca	FvH4_7g18170
malus_domestica	MD01G1095900.v1.1 MD01G1096200.v1.1 MD01G1096300.v1.1 MD01G1097600.v1.1 MD01G1131700.v1.1
prunus_persica	Prupe.2G203600_v2.0.a1
pyrus_communis	pycom01g11790 pycom01g11820 pycom01g11830 pycom01g11890 pycom01g11900 pycom01g11920 pycom01g11930 pycom01g12020 pycom01g12110 pycom01g12190 pycom01g12290 pycom01g12360 pycom01g12370 pycom01g12440 pycom01g12450 pycom01g12460 pycom01g12490
rosa_chinensis	RchiOBHm_Chr1g0361811
rosa_laevigata	RLG00000027702
rosa_multiflora	Rmu_co8192272.1_g000001 Rmu_ssc0000124.1_g000020
rosa_roxburghii	Rroxscaffold_4G00294690 Rroxscaffold_5G00338610
rosa_rugosa	Rorug01G0291500
rosa_samantha	Rh1AG302000 Rh1BG265000 Rh1DG294900
rosa_wichuraiana	Rw1G026760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	801, 1011, 1866
AasI	GACNNNNNNGTC	1 cut(s)	361
Acc36I	ACCTGC	1 cut(s)	2201
Acc65I	GGTACC	2 cut(s)	559, 2328
AccB1I	GGYRCC	3 cut(s)	107, 559, 2328
AccB7I	CCANNNNNTGG	1 cut(s)	1505
AccI	GTMKAC	3 cut(s)	794, 1255, 1610
AccII	CGCG	3 cut(s)	249, 282, 2228
AccIII	TCCGGA	1 cut(s)	994
AciI	CCGC	7 cut(s)	45, 48, 112, 166, 273, 280, 1463
AclWI	GGATC	1 cut(s)	1656
AcoI	YGGCCR	2 cut(s)	1656, 1785
AcsI	RAATTY	2 cut(s)	766, 1603
AcuI	CTGAAG	1 cut(s)	1498
AfaI	GTAC	8 cut(s)	464, 561, 730, 989, 1923, 2075, 2330, 2349
AfiI	CCNNNNNNNGG	5 cut(s)	73, 324, 1107, 1505, 1783
AflIII	ACRYGT	1 cut(s)	2226
AhlI	ACTAGT	1 cut(s)	731
AjiI	CACGTC	2 cut(s)	262, 1671
AjnI	CCWGG	3 cut(s)	69, 369, 555
AloI	GAACNNNNNNTCC	2 cut(s)	380, 412
Alw21I	GWGCWC	2 cut(s)	218, 878
Alw26I	GTCTC	3 cut(s)	54, 1535, 1565
AlwI	GGATC	1 cut(s)	1656
Ama87I	CYCGRG	1 cut(s)	305
Aor13HI	TCCGGA	1 cut(s)	994
AoxI	GGCC	4 cut(s)	75, 1152, 1656, 1785
ApeKI	GCWGC	3 cut(s)	1160, 1411, 2262
ApoI	RAATTY	2 cut(s)	766, 1603
AseI	ATTAAT	1 cut(s)	2088
Asp718I	GGTACC	2 cut(s)	559, 2328
AspLEI	GCGC	3 cut(s)	6, 251, 284
AspS9I	GGNCC	3 cut(s)	354, 1152, 1480
AsuC2I	CCSGG	2 cut(s)	286, 352
AsuHPI	GGTGA	9 cut(s)	76, 130, 214, 307, 620, 731, 1105, 1520, 2167
AvaI	CYCGRG	1 cut(s)	305
AvaII	GGWCC	2 cut(s)	354, 1480
BaeI	ACNNNNGTAYC	2 cut(s)	990, 1023
BalI	TGGCCA	2 cut(s)	1658, 1787
BanI	GGYRCC	3 cut(s)	107, 559, 2328
BbsI	GAAGAC	1 cut(s)	1677
Bbv12I	GWGCWC	2 cut(s)	218, 878
BbvCI	CCTCAGC	1 cut(s)	123
BbvI	GCAGC	3 cut(s)	1147, 1398, 2249
BceAI	ACGGC	1 cut(s)	326
BciT130I	CCWGG	3 cut(s)	71, 371, 557
BciVI	GTATCC	3 cut(s)	415, 667, 991
BclI	TGATCA	1 cut(s)	1621
BcnI	CCSGG	2 cut(s)	286, 352
BcoDI	GTCTC	3 cut(s)	54, 1535, 1565
BcuI	ACTAGT	1 cut(s)	731
BfaI	CTAG	7 cut(s)	338, 732, 957, 1271, 1416, 1707, 2015
BfuAI	ACCTGC	1 cut(s)	2201
BfuI	GTATCC	3 cut(s)	415, 667, 991
BisI	GCNGC	5 cut(s)	48, 280, 1161, 1412, 2263
BlpI	GCTNAGC	1 cut(s)	1799
BlsI	GCNGC	5 cut(s)	49, 281, 1162, 1413, 2264
Bme1390I	CCNGG	5 cut(s)	71, 286, 352, 371, 557
Bme18I	GGWCC	2 cut(s)	354, 1480
BmeT110I	CYCGRG	1 cut(s)	305
BmgBI	CACGTC	2 cut(s)	262, 1671
BmgT120I	GGNCC	3 cut(s)	354, 1152, 1480
BmiI	GGNNCC	4 cut(s)	109, 355, 561, 2330
BmrFI	CCNGG	5 cut(s)	71, 286, 352, 371, 557
BmrI	ACTGGG	2 cut(s)	94, 558
BmsI	GCATC	6 cut(s)	835, 883, 963, 1570, 2238, 2348
BmuI	ACTGGG	2 cut(s)	94, 558
BpiI	GAAGAC	1 cut(s)	1677
BplI	GAGNNNNNCTC	4 cut(s)	51, 83, 319, 351
BpmI	CTGGAG	1 cut(s)	1605
Bpu10I	CCTNAGC	2 cut(s)	123, 647
Bpu1102I	GCTNAGC	1 cut(s)	1799
BpuEI	CTTGAG	2 cut(s)	1280, 1897
BpuMI	CCSGG	2 cut(s)	286, 352
BsaAI	YACGTR	1 cut(s)	903
BsaBI	GATNNNNATC	1 cut(s)	1404
BsaJI	CCNNGG	4 cut(s)	7, 342, 1155, 1788
BsaWI	WCCGGW	2 cut(s)	994, 2109
BsaXI	ACNNNNNCTCC	4 cut(s)	857, 887, 1929, 1959
Bsc4I	CCNNNNNNNGG	5 cut(s)	73, 324, 1107, 1505, 1783
Bse1I	ACTGG	4 cut(s)	100, 564, 1681, 2019
Bse3DI	GCAATG	2 cut(s)	570, 586
Bse8I	GATNNNNATC	1 cut(s)	1404
BseAI	TCCGGA	1 cut(s)	994
BseBI	CCWGG	3 cut(s)	71, 371, 557
BseDI	CCNNGG	4 cut(s)	7, 342, 1155, 1788
BseJI	GATNNNNATC	1 cut(s)	1404
BseLI	CCNNNNNNNGG	5 cut(s)	73, 324, 1107, 1505, 1783
BseMI	GCAATG	2 cut(s)	570, 586
BseMII	CTCAG	6 cut(s)	137, 435, 1703, 1790, 1939, 2271
BseNI	ACTGG	4 cut(s)	100, 564, 1681, 2019
BseRI	GAGGAG	6 cut(s)	140, 143, 340, 878, 1277, 1629
BseXI	GCAGC	3 cut(s)	1147, 1398, 2249
Bsh1236I	CGCG	3 cut(s)	249, 282, 2228
BshFI	GGCC	4 cut(s)	77, 1154, 1658, 1787
BshNI	GGYRCC	3 cut(s)	107, 559, 2328
BsiHKAI	GWGCWC	2 cut(s)	218, 878
BsiHKCI	CYCGRG	1 cut(s)	305
BsiSI	CCGG	6 cut(s)	105, 285, 351, 890, 995, 2110
BslFI	GGGAC	3 cut(s)	349, 367, 1759
BslI	CCNNNNNNNGG	5 cut(s)	73, 324, 1107, 1505, 1783
BsmAI	GTCTC	3 cut(s)	54, 1535, 1565
BsmFI	GGGAC	3 cut(s)	349, 367, 1759
BsmI	GAATGC	3 cut(s)	377, 457, 1150
BsnI	GGCC	4 cut(s)	77, 1154, 1658, 1787
BsoBI	CYCGRG	1 cut(s)	305
Bsp1286I	GDGCHC	2 cut(s)	218, 878
Bsp13I	TCCGGA	1 cut(s)	994
Bsp1407I	TGTACA	2 cut(s)	462, 2073
Bsp143I	GATC	4 cut(s)	519, 1621, 1648, 2011
Bsp1720I	GCTNAGC	1 cut(s)	1799
BspACI	CCGC	7 cut(s)	45, 48, 112, 166, 273, 280, 1463
BspANI	GGCC	4 cut(s)	77, 1154, 1658, 1787
BspCNI	CTCAG	6 cut(s)	136, 436, 1702, 1791, 1938, 2270
BspEI	TCCGGA	1 cut(s)	994
BspFNI	CGCG	3 cut(s)	249, 282, 2228
BspHI	TCATGA	3 cut(s)	321, 883, 1383
BspLI	GGNNCC	4 cut(s)	109, 355, 561, 2330
BspMI	ACCTGC	1 cut(s)	2201
BspPI	GGATC	1 cut(s)	1656
BspQI	GCTCTTC	1 cut(s)	1999
BspT107I	GGYRCC	3 cut(s)	107, 559, 2328
BsrDI	GCAATG	2 cut(s)	570, 586
BsrGI	TGTACA	2 cut(s)	462, 2073
BsrI	ACTGG	4 cut(s)	100, 564, 1681, 2019
BssECI	CCNNGG	4 cut(s)	7, 342, 1155, 1788
BssMI	GATC	4 cut(s)	519, 1621, 1648, 2011
BssT1I	CCWWGG	2 cut(s)	7, 1788
Bst2UI	CCWGG	3 cut(s)	71, 371, 557
Bst4CI	ACNGT	4 cut(s)	856, 1003, 1309, 1704
Bst6I	CTCTTC	2 cut(s)	1999, 2141
BstAPI	GCANNNNNTGC	2 cut(s)	576, 1809
BstAUI	TGTACA	2 cut(s)	462, 2073
BstBAI	YACGTR	1 cut(s)	903
BstC8I	GCNNGC	4 cut(s)	277, 577, 1656, 1810
BstDEI	CTNAG	8 cut(s)	123, 444, 599, 647, 1689, 1799, 1925, 2257
BstDSI	CCRYGG	1 cut(s)	342
BstEII	GGTNACC	1 cut(s)	2054
BstFNI	CGCG	3 cut(s)	249, 282, 2228
BstHHI	GCGC	3 cut(s)	6, 251, 284
BstKTI	GATC	4 cut(s)	522, 1624, 1651, 2014
BstMAI	GTCTC	3 cut(s)	54, 1535, 1565
BstMBI	GATC	4 cut(s)	519, 1621, 1648, 2011
BstMWI	GCNNNNNNNGC	8 cut(s)	281, 576, 1160, 1387, 1809, 2015, 2044, 2137
BstNI	CCWGG	3 cut(s)	71, 371, 557
BstPI	GGTNACC	1 cut(s)	2054
BstSCI	CCNGG	5 cut(s)	69, 284, 350, 369, 555
BstSNI	TACGTA	1 cut(s)	903
BstUI	CGCG	3 cut(s)	249, 282, 2228
BstV1I	GCAGC	3 cut(s)	1147, 1398, 2249
BstV2I	GAAGAC	1 cut(s)	1677
BsuI	GTATCC	3 cut(s)	415, 667, 991
BsuRI	GGCC	4 cut(s)	77, 1154, 1658, 1787
BtgI	CCRYGG	1 cut(s)	342
BtrI	CACGTC	2 cut(s)	262, 1671
BtsIMutI	CAGTG	7 cut(s)	1522, 1631, 1674, 1700, 1837, 1933, 2280
BveI	ACCTGC	1 cut(s)	2201
Cac8I	GCNNGC	4 cut(s)	277, 577, 1656, 1810
CciI	TCATGA	3 cut(s)	321, 883, 1383
CfoI	GCGC	3 cut(s)	6, 251, 284
Cfr13I	GGNCC	3 cut(s)	354, 1152, 1480
CseI	GACGC	2 cut(s)	383, 2234
CsiI	ACCWGGT	1 cut(s)	555
Csp6I	GTAC	8 cut(s)	463, 560, 729, 988, 1922, 2074, 2329, 2348
CviQI	GTAC	8 cut(s)	463, 560, 729, 988, 1922, 2074, 2329, 2348
DdeI	CTNAG	8 cut(s)	123, 444, 599, 647, 1689, 1799, 1925, 2257
DpnI	GATC	4 cut(s)	521, 1623, 1650, 2013
DpnII	GATC	4 cut(s)	519, 1621, 1648, 2011
DrdI	GACNNNNNNGTC	1 cut(s)	361
DseDI	GACNNNNNNGTC	1 cut(s)	361
EaeI	YGGCCR	2 cut(s)	1656, 1785
Eam1104I	CTCTTC	2 cut(s)	1999, 2141
EarI	CTCTTC	2 cut(s)	1999, 2141
Eco105I	TACGTA	1 cut(s)	903
Eco130I	CCWWGG	2 cut(s)	7, 1788
Eco47I	GGWCC	2 cut(s)	354, 1480
Eco57I	CTGAAG	1 cut(s)	1498
Eco88I	CYCGRG	1 cut(s)	305
Eco91I	GGTNACC	1 cut(s)	2054
EcoO109I	RGGNCCY	1 cut(s)	354
EcoO65I	GGTNACC	1 cut(s)	2054
EcoRI	GAATTC	2 cut(s)	766, 1603
EcoRII	CCWGG	3 cut(s)	69, 369, 555
EcoT14I	CCWWGG	2 cut(s)	7, 1788
EcoT22I	ATGCAT	1 cut(s)	706
ErhI	CCWWGG	2 cut(s)	7, 1788
FalI	AAGNNNNNCTT	2 cut(s)	1886, 1918
FaqI	GGGAC	3 cut(s)	349, 367, 1759
FauI	CCCGC	2 cut(s)	119, 1470
FauNDI	CATATG	1 cut(s)	1644
FbaI	TGATCA	1 cut(s)	1621
FblI	GTMKAC	3 cut(s)	794, 1255, 1610
Fnu4HI	GCNGC	5 cut(s)	48, 280, 1161, 1412, 2263
FokI	GGATG	9 cut(s)	50, 218, 854, 905, 1090, 1220, 1412, 1571, 1748
Fsp4HI	GCNGC	5 cut(s)	48, 280, 1161, 1412, 2263
FspBI	CTAG	7 cut(s)	338, 732, 957, 1271, 1416, 1707, 2015
GlaI	GCGC	3 cut(s)	5, 250, 283
GluI	GCNGC	5 cut(s)	48, 280, 1161, 1412, 2263
GsuI	CTGGAG	1 cut(s)	1605
HaeIII	GGCC	4 cut(s)	77, 1154, 1658, 1787
HapII	CCGG	6 cut(s)	105, 285, 351, 890, 995, 2110
HgaI	GACGC	2 cut(s)	383, 2234
HhaI	GCGC	3 cut(s)	6, 251, 284
Hin6I	GCGC	3 cut(s)	4, 249, 282
HinP1I	GCGC	3 cut(s)	4, 249, 282
HindIII	AAGCTT	1 cut(s)	644
HpaII	CCGG	6 cut(s)	105, 285, 351, 890, 995, 2110
HphI	GGTGA	9 cut(s)	76, 130, 214, 307, 620, 731, 1105, 1520, 2167
Hpy166II	GTNNAC	6 cut(s)	795, 1256, 1611, 1674, 1922, 2125
Hpy188I	TCNGA	9 cut(s)	59, 492, 772, 909, 1065, 1125, 1425, 2220, 2241
Hpy8I	GTNNAC	6 cut(s)	795, 1256, 1611, 1674, 1922, 2125
Hpy99I	CGWCG	1 cut(s)	1555
HpyCH4III	ACNGT	4 cut(s)	856, 1003, 1309, 1704
HpyCH4IV	ACGT	5 cut(s)	261, 902, 1112, 1521, 1670
HpyF10VI	GCNNNNNNNGC	8 cut(s)	281, 576, 1160, 1387, 1809, 2015, 2044, 2137
HpyF3I	CTNAG	8 cut(s)	123, 444, 599, 647, 1689, 1799, 1925, 2257
HpySE526I	ACGT	5 cut(s)	261, 902, 1112, 1521, 1670
HspAI	GCGC	3 cut(s)	4, 249, 282
Kpn2I	TCCGGA	1 cut(s)	994
KpnI	GGTACC	2 cut(s)	563, 2332
Ksp22I	TGATCA	1 cut(s)	1621
Kzo9I	GATC	4 cut(s)	519, 1621, 1648, 2011
LguI	GCTCTTC	1 cut(s)	1999
LmnI	GCTCC	1 cut(s)	221
Lsp1109I	GCAGC	3 cut(s)	1147, 1398, 2249
LweI	GCATC	6 cut(s)	835, 883, 963, 1570, 2238, 2348
MabI	ACCWGGT	1 cut(s)	555
MaeI	CTAG	7 cut(s)	338, 732, 957, 1271, 1416, 1707, 2015
MaeII	ACGT	5 cut(s)	261, 902, 1112, 1521, 1670
MalI	GATC	4 cut(s)	521, 1623, 1650, 2013
MboI	GATC	4 cut(s)	519, 1621, 1648, 2011
MboII	GAAGA	8 cut(s)	196, 1198, 1201, 1295, 1677, 2008, 2016, 2158
MhlI	GDGCHC	2 cut(s)	218, 878
MlsI	TGGCCA	2 cut(s)	1658, 1787
MluCI	AATT	8 cut(s)	766, 849, 1012, 1338, 1603, 1814, 1867, 1980
MluI	ACGCGT	1 cut(s)	2226
MluNI	TGGCCA	2 cut(s)	1658, 1787
MlyI	GAGTC	6 cut(s)	13, 85, 767, 1537, 2249, 2357
Mox20I	TGGCCA	2 cut(s)	1658, 1787
Mph1103I	ATGCAT	1 cut(s)	706
MroI	TCCGGA	1 cut(s)	994
MscI	TGGCCA	2 cut(s)	1658, 1787
MseI	TTAA	6 cut(s)	627, 747, 1050, 1590, 2088, 2136
MslI	CAYNNNNRTG	4 cut(s)	320, 617, 709, 815
Msp20I	TGGCCA	2 cut(s)	1658, 1787
MspA1I	CMGCKG	1 cut(s)	1654
MspI	CCGG	6 cut(s)	105, 285, 351, 890, 995, 2110
MspR9I	CCNGG	5 cut(s)	71, 286, 352, 371, 557
Mva1269I	GAATGC	3 cut(s)	377, 457, 1150
MvaI	CCWGG	3 cut(s)	71, 371, 557
MvnI	CGCG	3 cut(s)	249, 282, 2228
MwoI	GCNNNNNNNGC	8 cut(s)	281, 576, 1160, 1387, 1809, 2015, 2044, 2137
NciI	CCSGG	2 cut(s)	286, 352
NdeI	CATATG	1 cut(s)	1644
NdeII	GATC	4 cut(s)	519, 1621, 1648, 2011
NlaIV	GGNNCC	4 cut(s)	109, 355, 561, 2330
NmeAIII	GCCGAG	1 cut(s)	1180
NmuCI	GTSAC	7 cut(s)	551, 608, 1178, 1508, 1517, 2173, 2278
NsiI	ATGCAT	1 cut(s)	706
PagI	TCATGA	3 cut(s)	321, 883, 1383
PciSI	GCTCTTC	1 cut(s)	1999
PcsI	WCGNNNNNNNCGW	1 cut(s)	1109
PctI	GAATGC	3 cut(s)	377, 457, 1150
PfeI	GAWTC	4 cut(s)	332, 347, 910, 1081
PflMI	CCANNNNNTGG	1 cut(s)	1505
PfoI	TCCNGGA	2 cut(s)	350, 369
PkrI	GCNGC	5 cut(s)	49, 281, 1162, 1413, 2264
PleI	GAGTC	6 cut(s)	13, 85, 767, 1536, 2249, 2357
PpsI	GAGTC	6 cut(s)	13, 85, 767, 1536, 2249, 2357
Ppu21I	YACGTR	1 cut(s)	903
PpuMI	RGGWCCY	1 cut(s)	354
PshBI	ATTAAT	1 cut(s)	2088
PsiI	TTATAA	3 cut(s)	801, 1011, 1866
Psp5II	RGGWCCY	1 cut(s)	354
Psp6I	CCWGG	3 cut(s)	69, 369, 555
PspEI	GGTNACC	1 cut(s)	2054
PspGI	CCWGG	3 cut(s)	69, 369, 555
PspN4I	GGNNCC	4 cut(s)	109, 355, 561, 2330
PspPI	GGNCC	3 cut(s)	354, 1152, 1480
PspPPI	RGGWCCY	1 cut(s)	354
PsrI	GAACNNNNNNTAC	2 cut(s)	971, 1003
PvuII	CAGCTG	1 cut(s)	1654
RsaI	GTAC	8 cut(s)	464, 561, 730, 989, 1923, 2075, 2330, 2349
RsaNI	GTAC	8 cut(s)	463, 560, 729, 988, 1922, 2074, 2329, 2348
RseI	CAYNNNNRTG	4 cut(s)	320, 617, 709, 815
SapI	GCTCTTC	1 cut(s)	1999
SaqAI	TTAA	6 cut(s)	627, 747, 1050, 1590, 2088, 2136
SatI	GCNGC	5 cut(s)	48, 280, 1161, 1412, 2263
Sau3AI	GATC	4 cut(s)	519, 1621, 1648, 2011
Sau96I	GGNCC	3 cut(s)	354, 1152, 1480
SchI	GAGTC	6 cut(s)	13, 85, 767, 1537, 2249, 2357
ScrFI	CCNGG	5 cut(s)	71, 286, 352, 371, 557
SduI	GDGCHC	2 cut(s)	218, 878
SexAI	ACCWGGT	1 cut(s)	555
SfaNI	GCATC	6 cut(s)	835, 883, 963, 1570, 2238, 2348
SinI	GGWCC	2 cut(s)	354, 1480
SmiMI	CAYNNNNRTG	4 cut(s)	320, 617, 709, 815
SmlI	CTYRAG	2 cut(s)	1259, 1876
SmoI	CTYRAG	2 cut(s)	1259, 1876
SnaBI	TACGTA	1 cut(s)	903
SpeI	ACTAGT	1 cut(s)	731
Sse9I	AATT	8 cut(s)	766, 849, 1012, 1338, 1603, 1814, 1867, 1980
SsiI	CCGC	7 cut(s)	45, 48, 112, 166, 273, 280, 1463
SspI	AATATT	1 cut(s)	1120
SspMI	CTAG	7 cut(s)	338, 732, 957, 1271, 1416, 1707, 2015
StyD4I	CCNGG	5 cut(s)	69, 284, 350, 369, 555
StyI	CCWWGG	2 cut(s)	7, 1788
TaaI	ACNGT	4 cut(s)	856, 1003, 1309, 1704
TaiI	ACGT	5 cut(s)	264, 905, 1115, 1524, 1673
TaqI	TCGA	7 cut(s)	198, 399, 518, 1103, 1360, 1437, 1550
TasI	AATT	8 cut(s)	766, 849, 1012, 1338, 1603, 1814, 1867, 1980
TatI	WGTACW	3 cut(s)	462, 1921, 2073
TauI	GCSGC	2 cut(s)	50, 282
TfiI	GAWTC	4 cut(s)	332, 347, 910, 1081
Tru1I	TTAA	6 cut(s)	627, 747, 1050, 1590, 2088, 2136
Tru9I	TTAA	6 cut(s)	627, 747, 1050, 1590, 2088, 2136
TscAI	CASTG	7 cut(s)	1522, 1631, 1681, 1707, 1837, 1933, 2287
TseFI	GTSAC	7 cut(s)	551, 608, 1178, 1508, 1517, 2173, 2278
TseI	GCWGC	3 cut(s)	1160, 1411, 2262
Tsp45I	GTSAC	7 cut(s)	551, 608, 1178, 1508, 1517, 2173, 2278
TspRI	CASTG	7 cut(s)	1522, 1631, 1681, 1707, 1837, 1933, 2287
Van91I	CCANNNNNTGG	1 cut(s)	1505
VpaK11BI	GGWCC	2 cut(s)	354, 1480
VspI	ATTAAT	1 cut(s)	2088
XapI	RAATTY	2 cut(s)	766, 1603
XbaI	TCTAGA	1 cut(s)	1706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2026
XmiI	GTMKAC	3 cut(s)	794, 1255, 1610
XspI	CTAG	7 cut(s)	338, 732, 957, 1271, 1416, 1707, 2015
Zsp2I	ATGCAT	1 cut(s)	706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.