Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0003384

Physical Location & Seq

Genomic Coordinates Forward (+)

13207519 .. 13211703

Gene Structure 4185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g12440.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2985 bp

ATGCCGATTGTCCACCAAAACTGTTGCTACAATGTTAGCAACGGTTTCAAGAATAAATCGCTAGATTCGTACCGAACCCCTCTTTTCGATTTTTTCTTTTTAAACAACAAACTATCGAACTCATATTTTTCAAAATATATTTTTTCATGCAAAATCTATTATCGTACATATTTAAACACTTCAGTACGTAGCTACCGATTGTCCACCAAAACTGTCGCTAGAATGTTAGCAACATATTTGTTTTTTGCTTATATTTGTTTTAGTTCTCTTACCATAACAACAGACTATCGAACTCATATTCTTCAAAATATATTTTTTCATACAAAATCAATCATCAAAAGGATACGATCAGTACCTAACTACCGATTGTCCACCAGAACTGTTGCTAGCGTGTTAGCAACCTTTTTGTTTTTTGCTTATGTTTTTTTTAGTTCTCTTAACATAACAACAAACTATCGAACTCATATTCTTCAAACTATATTTTTTCATGCAAAATCTATTATCGAACAGAAATGGATACGATCACAACAGCTTCAAGAAAGAATCGCTAGGTTCGTACCGAACCCCTCTTTTCAATGTTTTCTTTTTAGCTTTTTAGTTTTTGTTTTTTCGAACTCATATTCTTCAAAATATATTTTTTCATACAAAATCTATCATCGTACATATTTAAACACTTGTAATCAACGATTCCAAATAAATAAACGAAACAGAAAAGGATCTCGATCAGTACCTACCTACCGATTGTCCGCCAGAACTGTCGCTAGCATGTTAGCAGCAGTTTTTATTTTTCTTTTTAACTTTTTAGTTTTTGTTTTTTACTTATGTTTATTCTTTAAAATATATTTTTTCATGCAAAATCTATTATCGAAACAGAAAAGGGTACGATCTGTACTTAGCTACCGATTGTCCACCAAAACTGTCGGTAGAATGTTAGCAACATTTTTTTTTTTTGCTTATATTCGTTTTAGTTCTCTTACCATAACAACAGACTATCGAACTCATATTCTTCAAAATATAATTTTTCATGCAAAATCTATTATCAAAAGGGTACGATCAGTACTTAGCTACCGATTGTCCACCAGAACTGTCGCTAGAATGTTAGCAACAGTCATGGGAACGAAACACTCGCTTCGTACCGAACCCCTCTTTTTCGCTTTTTACGATCGAACTCATATTCTTCAAAATATATTTTTTTTCATGCAAAATCTATTATCAAATGAACAGAAAAGGATACGATCAGTACTTTGCAGCCGATTGTCCACAAAAACTGTCGCTAGTGTGTTAGCAACAGATCTTCCCCTTTCAAAACCGAACATGAAAGTTTCCTCGCATCTAGCTCTAGTAGTTACACCAAATAAAGATATATCGTTTTTTGTGTTTTTCATGGTTAAATCTAATGATCCGAACTCTTATCGAGTACAAATTTACTTGTTTAGAATAGAGAAAGTCGGAAATAGGGAAGAGAAAGAAGGGATAATTAGTGTAACATATCCATTCCATATACATTCCATTGAAGTAAACTCCATATCGTGCAATTTGCAATCATCAACTACCTACACGTATGTACTAATTAAATTTAGATGTTTATTGGAGGAACCAAACCTACTAAGACATATGAGTTTACAGCTCAGCACACAATCAACCCTTTACGTACCATTGAAGCATTTCACTAAACCCTTGACATGTGGTCCTAACTCATCTTCGTACCGTTCCTCACCGTTGGAGTCAGCTTTACTTACAAAGAATGAGTATCATTCTTATTCACGTGCTAATACTCACAAGATTGATAAACCGCATAAGATTGAATATTTTCTCCATTGGGATGTTCCTTGTTTGGGTTGGGTTAAGCTTAATGTTGACGGTTGCAAGAAGGGAAATAATAATTCTATTGGAGCATGTGGTGTTTTAAGAGATTTTGATGGTAAATGTATTTCTAGGTTTTGCGCCAATTTGGGCACATTTTGGATTCCTAAAGTACTGGTGGAATCAGACTCTACAGTTATAGTTCAATTTGTGTTGCAGTTGCTGGCAATAATCATCCTTTTGGTCCCCTTATTTTGGCCTATCGAGAATTGCGTTCAAGACCTTGGCAATGCAAACTTCGACATATCTACAAAGAAAAGAACTTTGTTTTTTATTTTGATACTCCTCCTTCTAGTTCAGTTAGTTTCATCTGTAAAGATCGACTTGGAATGTTCCGATCTAGATTTAATATTGAGTAGATTTGCTTGGACTCTTGCTTTTACAAACATCTCTGGGATTATATTACGTGATGTGGGAGGAGAGGCCCAAACAACAATCCGGGCCTGGCTAACAACAGGAAAAGGAGTGTCCAACCAAGTTTTCTGCATCTTATCTCAGTTAATCTGTATGTTTTTGGAAATGCAATGCGCCATGGAAGGCCTTTCCTGGTCAAAGACCACCGCCACCACGGCGCTTCCCAGCTGGGAGACATACTCCTGGTGGCCGCCATCACCAAGACCCTCTCAAACTCCAGCACCCGCAACCTCCCGGACCCCCACACTCTCCCGCTCTACGAGCCCCTCCGCGCCCAGTCCCTCCACCCCTCCAAAAAACTCGACTTCTTCAAATGGTGCTCTCTCACGCATAACATCAAACACTCGGTGCGCACCTACTCCCACATCCTCCGCACCGCCTCCCGCTCTGGATTCCTCCACGAGGTCCCTCAATTGCTTCACTCACGGCGTCGTGGTCGATTCCCAGACCTTCAAAGCCCTGCTCGACGCGTTTATCCGGTCCAGTAAGTTCGATTATGCGCTTGAAATTTTGGATTTTATGGAAGATGTTGGTGCTGGGTTGAACTCCGATATGTATAACTCGGTTCTTGTTGCTCTGTTTAGGAAAAACCAGGCGGGTTTGGCCATGGCCATTTTGCTTAAGCTTCTGGAGGGAGTGGATTCTTCCCAGGTGCGAATTCGATTGCCTGCAATGAGTTACTGGTTACTCTTAGAAAATCTGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

995

Amino Acids

113.9

Weight (kDa)

9.82

Isoelectric Point (pI)

45.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003384)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01570
fragaria_vesca	FvH4_7g18170
malus_domestica	MD01G1095900.v1.1 MD01G1096200.v1.1 MD01G1096300.v1.1 MD01G1097600.v1.1 MD01G1131700.v1.1
prunus_persica	Prupe.2G203600_v2.0.a1
pyrus_communis	pycom01g11790 pycom01g11820 pycom01g11830 pycom01g11890 pycom01g11900 pycom01g11920 pycom01g11930 pycom01g12020 pycom01g12110 pycom01g12190 pycom01g12290 pycom01g12360 pycom01g12370 pycom01g12440 pycom01g12450 pycom01g12460 pycom01g12490
rosa_chinensis	RchiOBHm_Chr1g0361811
rosa_laevigata	RLG00000027702
rosa_multiflora	Rmu_co8192272.1_g000001 Rmu_ssc0000124.1_g000020
rosa_roxburghii	Rroxscaffold_4G00294690 Rroxscaffold_5G00338610
rosa_rugosa	Rorug01G0291500
rosa_samantha	Rh1AG302000 Rh1BG265000 Rh1DG294900
rosa_wichuraiana	Rw1G026760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2629
AccBSI	CCGCTC	2 cut(s)	2532, 2663
AccII	CGCG	2 cut(s)	2549, 2747
AclWI	GGATC	2 cut(s)	724, 1394
AcoI	YGGCCR	3 cut(s)	2465, 2880, 2886
AcsI	RAATTY	4 cut(s)	1422, 1574, 2784, 2934
AcuI	CTGAAG	1 cut(s)	165
AcvI	CACGTG	1 cut(s)	1766
AcyI	GRCGYC	1 cut(s)	2706
AdeI	CACNNNGTG	1 cut(s)	2625
AfiI	CCNNNNNNNGG	3 cut(s)	1835, 2058, 2679
AflII	CTTAAG	1 cut(s)	2897
AflIII	ACRYGT	3 cut(s)	1557, 1682, 2745
AhdI	GACNNNNNGTC	1 cut(s)	1686
AjnI	CCWGG	5 cut(s)	2306, 2408, 2459, 2868, 2925
AjuI	GAANNNNNNNTTGG	2 cut(s)	2327, 2359
Alw21I	GWGCWC	1 cut(s)	2599
Alw26I	GTCTC	1 cut(s)	2444
AlwI	GGATC	2 cut(s)	724, 1394
AlwNI	CAGNNNCTG	1 cut(s)	2026
AoxI	GGCC	7 cut(s)	2060, 2286, 2304, 2401, 2465, 2880, 2886
ApeKI	GCWGC	2 cut(s)	773, 1248
ApoI	RAATTY	4 cut(s)	1422, 1574, 2784, 2934
Asp700I	GAANNNNTTC	2 cut(s)	1664, 1809
AspLEI	GCGC	6 cut(s)	1946, 2393, 2437, 2551, 2630, 2779
AspS9I	GGNCC	7 cut(s)	1688, 2047, 2287, 2304, 2514, 2682, 2757
AsuC2I	CCSGG	2 cut(s)	2303, 2512
AsuHPI	GGTGA	2 cut(s)	1707, 2466
AsuII	TTCGAA	1 cut(s)	611
AsuNHI	GCTAGC	2 cut(s)	386, 761
AvaII	GGWCC	5 cut(s)	1688, 2047, 2514, 2682, 2757
BaeGI	GKGCMC	1 cut(s)	1958
BalI	TGGCCA	2 cut(s)	2882, 2888
BanII	GRGCYC	1 cut(s)	2543
BauI	CACGAG	1 cut(s)	2677
BbrPI	CACGTG	1 cut(s)	1766
Bbv12I	GWGCWC	1 cut(s)	2599
BbvI	GCAGC	2 cut(s)	785, 1260
BccI	CCATC	2 cut(s)	1913, 2479
BceAI	ACGGC	2 cut(s)	2448, 2719
BciT130I	CCWGG	5 cut(s)	2308, 2410, 2461, 2870, 2927
BciVI	GTATCC	3 cut(s)	336, 510, 1224
BcnI	CCSGG	2 cut(s)	2303, 2512
BcoDI	GTCTC	1 cut(s)	2444
BfmI	CTRYAG	1 cut(s)	1995
BfoI	RGCGCY	1 cut(s)	2438
BfrI	CTTAAG	1 cut(s)	2897
BfuI	GTATCC	3 cut(s)	336, 510, 1224
BglI	GCCNNNNNGGC	1 cut(s)	2432
BglII	AGATCT	1 cut(s)	1291
BisI	GCNGC	3 cut(s)	774, 1249, 2468
BlpI	GCTNAGC	1 cut(s)	1628
BlsI	GCNGC	3 cut(s)	775, 1250, 2469
BmcAI	AGTACT	3 cut(s)	1059, 1242, 1977
Bme1390I	CCNGG	7 cut(s)	2303, 2308, 2410, 2461, 2512, 2870, 2927
Bme18I	GGWCC	5 cut(s)	1688, 2047, 2514, 2682, 2757
BmeRI	GACNNNNNGTC	1 cut(s)	1686
BmgT120I	GGNCC	7 cut(s)	1688, 2047, 2287, 2304, 2514, 2682, 2757
BmiI	GGNNCC	4 cut(s)	1596, 2049, 2516, 2684
BmrFI	CCNGG	7 cut(s)	2303, 2308, 2410, 2461, 2512, 2870, 2927
BmrI	ACTGGG	1 cut(s)	2547
BmsI	GCATC	2 cut(s)	1339, 2358
BmtI	GCTAGC	2 cut(s)	390, 765
BmuI	ACTGGG	1 cut(s)	2547
BplI	GAGNNNNNCTC	2 cut(s)	2441, 2473
BpmI	CTGGAG	2 cut(s)	2478, 2927
Bpu1102I	GCTNAGC	1 cut(s)	1628
Bpu14I	TTCGAA	1 cut(s)	611
BpuMI	CCSGG	2 cut(s)	2303, 2512
BsaAI	YACGTR	5 cut(s)	188, 1560, 1651, 1766, 2270
BsaBI	GATNNNNATC	1 cut(s)	721
BsaHI	GRCGYC	1 cut(s)	2706
BsaJI	CCNNGG	5 cut(s)	2086, 2394, 2430, 2883, 2925
BsaWI	WCCGGW	1 cut(s)	2754
Bsc4I	CCNNNNNNNGG	3 cut(s)	1835, 2058, 2679
Bse1I	ACTGG	4 cut(s)	1983, 2553, 2760, 2963
Bse3DI	GCAATG	3 cut(s)	2098, 2393, 2955
Bse8I	GATNNNNATC	1 cut(s)	721
BseBI	CCWGG	5 cut(s)	2308, 2410, 2461, 2870, 2927
BseDI	CCNNGG	5 cut(s)	2086, 2394, 2430, 2883, 2925
BseGI	GGATG	3 cut(s)	1828, 2037, 2642
BseJI	GATNNNNATC	1 cut(s)	721
BseLI	CCNNNNNNNGG	3 cut(s)	1835, 2058, 2679
BseMI	GCAATG	3 cut(s)	2098, 2393, 2955
BseMII	CTCAG	2 cut(s)	1642, 2372
BseNI	ACTGG	4 cut(s)	1983, 2553, 2760, 2963
BseRI	GAGGAG	2 cut(s)	2138, 2295
BseSI	GKGCMC	1 cut(s)	1958
BseXI	GCAGC	2 cut(s)	785, 1260
BseYI	CCCAGC	3 cut(s)	2441, 2445, 2813
Bsh1236I	CGCG	2 cut(s)	2549, 2747
Bsh1285I	CGRYCG	1 cut(s)	1165
BshFI	GGCC	7 cut(s)	2062, 2288, 2306, 2403, 2467, 2882, 2888
BsiEI	CGRYCG	1 cut(s)	1165
BsiHKAI	GWGCWC	1 cut(s)	2599
BsiSI	CCGG	3 cut(s)	2302, 2512, 2755
BslFI	GGGAC	3 cut(s)	2033, 2541, 2668
BslI	CCNNNNNNNGG	3 cut(s)	1835, 2058, 2679
BsmAI	GTCTC	1 cut(s)	2444
BsmFI	GGGAC	3 cut(s)	2033, 2541, 2668
BsnI	GGCC	7 cut(s)	2062, 2288, 2306, 2403, 2467, 2882, 2888
Bsp119I	TTCGAA	1 cut(s)	611
Bsp1286I	GDGCHC	3 cut(s)	1958, 2543, 2599
Bsp1720I	GCTNAGC	1 cut(s)	1628
Bsp19I	CCATGG	2 cut(s)	2394, 2883
BspANI	GGCC	7 cut(s)	2062, 2288, 2306, 2403, 2467, 2882, 2888
BspCNI	CTCAG	2 cut(s)	1641, 2371
BspFNI	CGCG	2 cut(s)	2549, 2747
BspLI	GGNNCC	4 cut(s)	1596, 2049, 2516, 2684
BspOI	GCTAGC	2 cut(s)	390, 765
BspPI	GGATC	2 cut(s)	724, 1394
BspT104I	TTCGAA	1 cut(s)	611
BspTI	CTTAAG	1 cut(s)	2897
BsrBI	CCGCTC	2 cut(s)	2532, 2663
BsrDI	GCAATG	3 cut(s)	2098, 2393, 2955
BsrI	ACTGG	4 cut(s)	1983, 2553, 2760, 2963
BssECI	CCNNGG	5 cut(s)	2086, 2394, 2430, 2883, 2925
BssNI	GRCGYC	1 cut(s)	2706
BssSI	CACGAG	1 cut(s)	2677
BssT1I	CCWWGG	3 cut(s)	2086, 2394, 2883
Bst2BI	CACGAG	1 cut(s)	2677
Bst2UI	CCWGG	5 cut(s)	2308, 2410, 2461, 2870, 2927
Bst6I	CTCTTC	1 cut(s)	1455
BstACI	GRCGYC	1 cut(s)	2706
BstAFI	CTTAAG	1 cut(s)	2897
BstBAI	YACGTR	5 cut(s)	188, 1560, 1651, 1766, 2270
BstBI	TTCGAA	1 cut(s)	611
BstC8I	GCNNGC	4 cut(s)	388, 763, 2028, 2946
BstDEI	CTNAG	6 cut(s)	893, 1061, 1607, 1628, 2358, 2968
BstDSI	CCRYGG	3 cut(s)	2394, 2430, 2883
BstENI	CCTNNNNNAGG	1 cut(s)	2677
BstF5I	GGATG	3 cut(s)	1828, 2037, 2642
BstFNI	CGCG	2 cut(s)	2549, 2747
BstH2I	RGCGCY	1 cut(s)	2438
BstHHI	GCGC	6 cut(s)	1946, 2393, 2437, 2551, 2630, 2779
BstMAI	GTCTC	1 cut(s)	2444
BstMCI	CGRYCG	1 cut(s)	1165
BstMWI	GCNNNNNNNGC	3 cut(s)	2432, 2538, 2879
BstNI	CCWGG	5 cut(s)	2308, 2410, 2461, 2870, 2927
BstNSI	RCATGY	3 cut(s)	769, 1686, 1899
BstSCI	CCNGG	7 cut(s)	2301, 2306, 2408, 2459, 2510, 2868, 2925
BstSFI	CTRYAG	1 cut(s)	1995
BstSLI	GKGCMC	1 cut(s)	1958
BstSNI	TACGTA	2 cut(s)	188, 1651
BstUI	CGCG	2 cut(s)	2549, 2747
BstV1I	GCAGC	2 cut(s)	785, 1260
BstX2I	RGATCY	2 cut(s)	716, 1291
BstYI	RGATCY	2 cut(s)	716, 1291
BsuI	GTATCC	3 cut(s)	336, 510, 1224
BsuRI	GGCC	7 cut(s)	2062, 2288, 2306, 2403, 2467, 2882, 2888
BtgI	CCRYGG	3 cut(s)	2394, 2430, 2883
BtsCI	GGATG	3 cut(s)	1828, 2037, 2642
Cac8I	GCNNGC	4 cut(s)	388, 763, 2028, 2946
CaiI	CAGNNNCTG	1 cut(s)	2026
CfoI	GCGC	6 cut(s)	1946, 2393, 2437, 2551, 2630, 2779
Cfr13I	GGNCC	7 cut(s)	1688, 2047, 2287, 2304, 2514, 2682, 2757
CseI	GACGC	2 cut(s)	2695, 2753
DdeI	CTNAG	6 cut(s)	893, 1061, 1607, 1628, 2358, 2968
DraI	TTTAAA	4 cut(s)	102, 174, 669, 835
DraIII	CACNNNGTG	1 cut(s)	2625
DriI	GACNNNNNGTC	1 cut(s)	1686
EaeI	YGGCCR	3 cut(s)	2465, 2880, 2886
Eam1104I	CTCTTC	1 cut(s)	1455
Eam1105I	GACNNNNNGTC	1 cut(s)	1686
EarI	CTCTTC	1 cut(s)	1455
EciI	GGCGGA	1 cut(s)	736
Eco105I	TACGTA	2 cut(s)	188, 1651
Eco130I	CCWWGG	3 cut(s)	2086, 2394, 2883
Eco147I	AGGCCT	1 cut(s)	2403
Eco24I	GRGCYC	1 cut(s)	2543
Eco47I	GGWCC	5 cut(s)	1688, 2047, 2514, 2682, 2757
Eco57I	CTGAAG	1 cut(s)	165
Eco72I	CACGTG	1 cut(s)	1766
EcoNI	CCTNNNNNAGG	1 cut(s)	2677
EcoO109I	RGGNCCY	1 cut(s)	2682
EcoRI	GAATTC	1 cut(s)	2934
EcoRII	CCWGG	5 cut(s)	2306, 2408, 2459, 2868, 2925
EcoT14I	CCWWGG	3 cut(s)	2086, 2394, 2883
EcoT38I	GRGCYC	1 cut(s)	2543
ErhI	CCWWGG	3 cut(s)	2086, 2394, 2883
FalI	AAGNNNNNCTT	2 cut(s)	2171, 2203
FaqI	GGGAC	3 cut(s)	2033, 2541, 2668
FauI	CCCGC	4 cut(s)	2509, 2537, 2668, 2866
FauNDI	CATATG	1 cut(s)	1614
Fnu4HI	GCNGC	3 cut(s)	774, 1249, 2468
FokI	GGATG	3 cut(s)	1835, 2024, 2629
FriOI	GRGCYC	1 cut(s)	2543
Fsp4HI	GCNGC	3 cut(s)	774, 1249, 2468
FspAI	RTGCGCAY	1 cut(s)	2629
FspI	TGCGCA	1 cut(s)	2629
GlaI	GCGC	6 cut(s)	1945, 2392, 2436, 2550, 2629, 2778
GluI	GCNGC	3 cut(s)	774, 1249, 2468
GsaI	CCCAGC	3 cut(s)	2445, 2449, 2817
GsuI	CTGGAG	2 cut(s)	2478, 2927
HaeII	RGCGCY	1 cut(s)	2438
HaeIII	GGCC	7 cut(s)	2062, 2288, 2306, 2403, 2467, 2882, 2888
HapII	CCGG	3 cut(s)	2302, 2512, 2755
HgaI	GACGC	2 cut(s)	2695, 2753
HhaI	GCGC	6 cut(s)	1946, 2393, 2437, 2551, 2630, 2779
Hin1I	GRCGYC	1 cut(s)	2706
Hin6I	GCGC	6 cut(s)	1944, 2391, 2435, 2549, 2628, 2777
HinP1I	GCGC	6 cut(s)	1944, 2391, 2435, 2549, 2628, 2777
HincII	GTYRAC	1 cut(s)	1858
HindII	GTYRAC	1 cut(s)	1858
HindIII	AAGCTT	2 cut(s)	1847, 2900
HpaII	CCGG	3 cut(s)	2302, 2512, 2755
HphI	GGTGA	2 cut(s)	1707, 2466
Hpy166II	GTNNAC	9 cut(s)	13, 204, 372, 909, 1077, 1260, 1519, 1622, 1858
Hpy188I	TCNGA	6 cut(s)	1404, 1451, 1990, 2200, 2827, 2979
Hpy188III	TCNNGA	8 cut(s)	49, 536, 720, 2068, 2081, 2204, 2666, 2906
Hpy8I	GTNNAC	9 cut(s)	13, 204, 372, 909, 1077, 1260, 1519, 1622, 1858
Hpy99I	CGWCG	2 cut(s)	2711, 2747
HpyAV	CCTTC	5 cut(s)	1463, 1864, 2162, 2393, 2737
HpyCH4IV	ACGT	5 cut(s)	187, 1559, 1650, 1765, 2269
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2432, 2538, 2879
HpyF3I	CTNAG	6 cut(s)	893, 1061, 1607, 1628, 2358, 2968
HpySE526I	ACGT	5 cut(s)	187, 1559, 1650, 1765, 2269
Hsp92I	GRCGYC	1 cut(s)	2706
HspAI	GCGC	6 cut(s)	1944, 2391, 2435, 2549, 2628, 2777
LmnI	GCTCC	1 cut(s)	1892
Lsp1109I	GCAGC	2 cut(s)	785, 1260
LweI	GCATC	2 cut(s)	1339, 2358
MaeII	ACGT	5 cut(s)	187, 1559, 1650, 1765, 2269
MaeIII	GTNAC	4 cut(s)	1345, 1483, 2954, 2961
MbiI	CCGCTC	2 cut(s)	2532, 2663
MfeI	CAATTG	1 cut(s)	2689
MflI	RGATCY	2 cut(s)	716, 1291
MhlI	GDGCHC	3 cut(s)	1958, 2543, 2599
MlsI	TGGCCA	2 cut(s)	2882, 2888
MluI	ACGCGT	1 cut(s)	2745
MluNI	TGGCCA	2 cut(s)	2882, 2888
MlyI	GAGTC	3 cut(s)	1733, 1985, 2227
MmeI	TCCRAC	3 cut(s)	1429, 1701, 2358
Mox20I	TGGCCA	2 cut(s)	2882, 2888
MroXI	GAANNNNTTC	2 cut(s)	1664, 1809
MscI	TGGCCA	2 cut(s)	2882, 2888
MslI	CAYNNNNRTG	1 cut(s)	1821
Msp20I	TGGCCA	2 cut(s)	2882, 2888
MspA1I	CMGCKG	1 cut(s)	2445
MspCI	CTTAAG	1 cut(s)	2897
MspI	CCGG	3 cut(s)	2302, 2512, 2755
MspR9I	CCNGG	7 cut(s)	2303, 2308, 2410, 2461, 2512, 2870, 2927
MunI	CAATTG	1 cut(s)	2689
MvaI	CCWGG	5 cut(s)	2308, 2410, 2461, 2870, 2927
MvnI	CGCG	2 cut(s)	2549, 2747
MwoI	GCNNNNNNNGC	3 cut(s)	2432, 2538, 2879
NciI	CCSGG	2 cut(s)	2303, 2512
NcoI	CCATGG	2 cut(s)	2394, 2883
NdeI	CATATG	1 cut(s)	1614
NheI	GCTAGC	2 cut(s)	386, 761
NlaIV	GGNNCC	4 cut(s)	1596, 2049, 2516, 2684
NsbI	TGCGCA	1 cut(s)	2629
NspI	RCATGY	3 cut(s)	769, 1686, 1899
NspV	TTCGAA	1 cut(s)	611
PceI	AGGCCT	1 cut(s)	2403
PciI	ACATGT	1 cut(s)	1682
PcsI	WCGNNNNNNNCGW	5 cut(s)	65, 193, 552, 1158, 2073
PdmI	GAANNNNTTC	2 cut(s)	1664, 1809
PfeI	GAWTC	8 cut(s)	65, 543, 687, 1966, 1985, 2669, 2717, 2918
PfoI	TCCNGGA	1 cut(s)	2510
PkrI	GCNGC	3 cut(s)	775, 1250, 2469
Ple19I	CGATCG	1 cut(s)	1165
PleI	GAGTC	3 cut(s)	1732, 1985, 2227
PmaCI	CACGTG	1 cut(s)	1766
PmlI	CACGTG	1 cut(s)	1766
PpsI	GAGTC	3 cut(s)	1732, 1985, 2227
Ppu21I	YACGTR	5 cut(s)	188, 1560, 1651, 1766, 2270
PpuMI	RGGWCCY	1 cut(s)	2682
PscI	ACATGT	1 cut(s)	1682
Psp5II	RGGWCCY	1 cut(s)	2682
Psp6I	CCWGG	5 cut(s)	2306, 2408, 2459, 2868, 2925
PspCI	CACGTG	1 cut(s)	1766
PspFI	CCCAGC	3 cut(s)	2441, 2445, 2813
PspGI	CCWGG	5 cut(s)	2306, 2408, 2459, 2868, 2925
PspN4I	GGNNCC	4 cut(s)	1596, 2049, 2516, 2684
PspPI	GGNCC	7 cut(s)	1688, 2047, 2287, 2304, 2514, 2682, 2757
PspPPI	RGGWCCY	1 cut(s)	2682
PsrI	GAACNNNNNNTAC	2 cut(s)	1587, 1619
PstNI	CAGNNNCTG	1 cut(s)	2026
PsuI	RGATCY	2 cut(s)	716, 1291
PvuI	CGATCG	1 cut(s)	1165
PvuII	CAGCTG	1 cut(s)	2445
RseI	CAYNNNNRTG	1 cut(s)	1821
SatI	GCNGC	3 cut(s)	774, 1249, 2468
Sau96I	GGNCC	7 cut(s)	1688, 2047, 2287, 2304, 2514, 2682, 2757
ScaI	AGTACT	3 cut(s)	1059, 1242, 1977
SchI	GAGTC	3 cut(s)	1733, 1985, 2227
ScrFI	CCNGG	7 cut(s)	2303, 2308, 2410, 2461, 2512, 2870, 2927
SduI	GDGCHC	3 cut(s)	1958, 2543, 2599
SfaNI	GCATC	2 cut(s)	1339, 2358
SfcI	CTRYAG	1 cut(s)	1995
SfuI	TTCGAA	1 cut(s)	611
SinI	GGWCC	5 cut(s)	1688, 2047, 2514, 2682, 2757
SmiMI	CAYNNNNRTG	1 cut(s)	1821
SmlI	CTYRAG	1 cut(s)	2897
SmoI	CTYRAG	1 cut(s)	2897
SnaBI	TACGTA	2 cut(s)	188, 1651
SseBI	AGGCCT	1 cut(s)	2403
SspI	AATATT	2 cut(s)	1808, 2214
StuI	AGGCCT	1 cut(s)	2403
StyD4I	CCNGG	7 cut(s)	2301, 2306, 2408, 2459, 2510, 2868, 2925
StyI	CCWWGG	3 cut(s)	2086, 2394, 2883
TaiI	ACGT	5 cut(s)	190, 1562, 1653, 1768, 2272
TatI	WGTACW	6 cut(s)	889, 1057, 1240, 1417, 1564, 1975
TauI	GCSGC	1 cut(s)	2470
TfiI	GAWTC	8 cut(s)	65, 543, 687, 1966, 1985, 2669, 2717, 2918
TseI	GCWGC	2 cut(s)	773, 1248
Vha464I	CTTAAG	1 cut(s)	2897
VpaK11BI	GGWCC	5 cut(s)	1688, 2047, 2514, 2682, 2757
XagI	CCTNNNNNAGG	1 cut(s)	2677
XapI	RAATTY	4 cut(s)	1422, 1574, 2784, 2934
XbaI	TCTAGA	1 cut(s)	2203
XceI	RCATGY	3 cut(s)	769, 1686, 1899
XmnI	GAANNNNTTC	2 cut(s)	1664, 1809
ZrmI	AGTACT	3 cut(s)	1059, 1242, 1977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.