Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0003384

Physical Location & Seq

Genomic Coordinates Forward (+)

13076603 .. 13079803

Gene Structure 3201 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g12290.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGGGTACTCCTAAACGGTTATCCATAACCGTAACTGTCAAATTTAAATGGCCCTATCCCCACCTACATCATAATCCCACCCACCATAAAAAAAGGTTAAAAATTAAATTATTTAAATTTTTTAGAAGAATAGATATTAGAGTGCTCAGAAACCCAGCTAAGCCTTCACTAGTTGCCAAGATATTTCTTTCCGATTTCTTGAACTCCTTTCCTTCGCCCTCTGTTGCGTCTTACTCCAGAACCTATATTGATCCCTGCCCACAACCACCCCTCCTCCTCTTCTCTGTCAGTCTCCCTTCTTTACTCTTTGACCACCCCCATGTCAAAGAACACAAAATACAAACACAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAAGCAACAACCTCAGGAAGCTCACAAAATCAAATCCAAACAACCTAAATATCTTCCACACATGATGACACCTAAACCTACAACGAATACGCAGCCACACAATTCATTCTTACGACAACAAACACCAAATCTGCATCTACACCACTCAAAAAAATCCCACACCATAATCAAATGCACTGTACTAAACCAAAAATTAAAACCTACCTCAAAGGTTTTGTTGGTTAAATTTAAGAGTCACTATGAAGGATGCAGAGATAAGACAGTGAGTAAAATTGATACAAATCATTTTTTTTCCATTGGTCTTTATATGTCATTGTACATGAGGATAAAATTAGTACTTAATTTTTTATTAAAGGGAAGGAGAAGCCCAAACAACAATTTGAGCCTGACTAACAACGAGAAAAGGAGTATCCAACCAAGTCTAAGCCCAACTTTAAGTAAAACCTGTCAAACAGTTAATATGAGAAGAATAATCTTCTTTTTTATTCTCTTCCCCTTCTTCTCTTTTCTCTTACATATTTTATTTTGTATTATTATCTTTATAAAAAATCAACATAAAATGTTGATGTGGTTAAACTTAGATTCCTCCTCCCAGTTAATACAGTTTCTGCATCTGCTTCTCGGTTGTGAACTCAAAATCTCAGAATCTGTGTGTTTTTGGAAATGCAATGCGCCATGGAAGGCCTTTCCTGGTCAAAGACCACCACCACCACGGCGCCTCCCAGCTGGGAGACATACTCCTGGTGGCCGCCATCACCAAGACCCTCTCAACCTCCGGCACCTGCAACCTCCCGGACCCCCACACCCTTCCGCTCTCCAAGCCCATCCTCTTCCAAATCCTCCGCGCCCAGGCCCTCCACCCCTCCAAAAAACTCGACTTCTTCAATGTTGCTCTCTCACGCATAACATCAAACACTCGGCGCGCACCTACTCCCACATCCTCCGCACCGCCTCCCGCTCGGGATTCCTCCACGAGGTCCCTCAACTGCTTCACTCCATGAAGGAGGACGGCATCGTGGTCGATTCCCAGACCTTCAAAACCCTGCTCGACGCGTTTATTATCCGGTCCGGTAAGTTCGATTACGCGCTTGAAATTTTGGAAATTATGCAAGATGTTGGTGCTGGGTTGAACACCGATATGTATAACTCGGTTCTTGTTGCTCTGGTTAGGAAATACCAGGTGGGTTTGGCCATGGCCATTTTGTTTGAGCTTCTGGGGGGAGGGGATTCGACCCAGGTGCTCTGCTTGGTGGGGAAGGTGAATGATGCACTTACTGTATGGGAGGAATTGAAGGGCTCCGGCCATGAGCCGGACGCAATTACCTATAGAATTCTTATTCAGGTGTGTTGTAAGTGTTATCGAATAGACGATGCCACTAAGATTTTTAGTGAAATGCAGCTCAATGGATATATCCCAGATACTATTGTTTATAATTCTCTACTAGATGGGTTATTCAAGGCTAGGAAGGTTAATGATGGCTGCAAATTATTAGAGAAAATTGTTCAGAATGGGGTGAGAGCCTCGATGTGGATGTATAATATTCTCAGGGACGGTTTGTTCAGGAATGGATGGGCAGAGGCTGCGTACACACTATTTTATATAGCATTATGGTTTTGCAACTTTATACGGACGGTCTGCTGGAGGAAGCGCGAGGATTGGTGGAAAAAAATGGAAAGGAGAGGCTTTACTGTTGATTTAATTACTGTATCGTCACTTGTGATTGGGCTGTATAAAGAAGGTCGGTGGGATTGGACGCACAAGCTCATGAAATACATTAGAGATGGTAACCTAGTGCCGAGTGTTCTTAAATGGAAGGTTGATATGGAGGCTTCACTGAAAAATCCGCAGAGAAATAGAAAGGATTATGCACCATTATGGTCTGCTGAATCAACAATGGATGCAGACCTAGATTCAGAGGCTACCAGGGCTAAAGAAGATGGTAAGAATTTGTCCACCGATACGGATCGGTGGTCATCATCTCCACATATGGATGAATTGGCTAATCAACTTAAGTCCACCGACCACGCCTCGCAGCTGTTTTCAGTGTCCAGGGGGCTAAGAGTTCAAGCAAAAGGGGAAAGCACTTTTGATATTGACATGGTTAGTACTTTTTTTTTCCTTATTCTTGGCCAAGGGAAAGATGAGCATAGCATGCAAATTACTTATAATTCCATGATGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

853

Amino Acids

98.21

Weight (kDa)

9.84

Isoelectric Point (pI)

44.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003384)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01570
fragaria_vesca	FvH4_7g18170
malus_domestica	MD01G1095900.v1.1 MD01G1096200.v1.1 MD01G1096300.v1.1 MD01G1097600.v1.1 MD01G1131700.v1.1
prunus_persica	Prupe.2G203600_v2.0.a1
pyrus_communis	pycom01g11790 pycom01g11820 pycom01g11830 pycom01g11890 pycom01g11900 pycom01g11920 pycom01g11930 pycom01g12020 pycom01g12110 pycom01g12190 pycom01g12290 pycom01g12360 pycom01g12370 pycom01g12440 pycom01g12450 pycom01g12460 pycom01g12490
rosa_chinensis	RchiOBHm_Chr1g0361811
rosa_laevigata	RLG00000027702
rosa_multiflora	Rmu_co8192272.1_g000001 Rmu_ssc0000124.1_g000020
rosa_roxburghii	Rroxscaffold_4G00294690 Rroxscaffold_5G00338610
rosa_rugosa	Rorug01G0291500
rosa_samantha	Rh1AG302000 Rh1BG265000 Rh1DG294900
rosa_wichuraiana	Rw1G026760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	917, 1806, 2541
AarI	CACCTGC	1 cut(s)	1164
Acc36I	ACCTGC	1 cut(s)	1164
AccB1I	GGYRCC	2 cut(s)	1089, 1152
AccBSI	CCGCTC	2 cut(s)	1187, 1332
AccII	CGCG	5 cut(s)	1219, 1297, 1427, 1460, 2025
AciI	CCGC	7 cut(s)	1123, 1185, 1217, 1318, 1323, 1330, 2219
AclWI	GGATC	2 cut(s)	245, 2346
AcoI	YGGCCR	5 cut(s)	1120, 1563, 1569, 1675, 2503
AcsI	RAATTY	6 cut(s)	41, 116, 599, 1467, 1704, 2320
AcyI	GRCGYC	1 cut(s)	1090
AfaI	GTAC	6 cut(s)	7, 555, 692, 711, 1961, 2482
AfiI	CCNNNNNNNGG	4 cut(s)	1223, 1348, 1684, 1902
AflII	CTTAAG	1 cut(s)	2384
AflIII	ACRYGT	1 cut(s)	1425
AgsI	TTSAA	8 cut(s)	202, 1259, 1411, 1466, 1504, 1666, 1831, 2441
AhlI	ACTAGT	1 cut(s)	169
AjnI	CCWGG	7 cut(s)	1063, 1114, 1222, 1551, 1608, 2297, 2423
AloI	GAACNNNNNNTCC	2 cut(s)	1916, 1948
AluBI	AGCT	7 cut(s)	158, 395, 1100, 1585, 1774, 2137, 2410
AluI	AGCT	7 cut(s)	158, 395, 1100, 1585, 1774, 2137, 2410
Alw21I	GWGCWC	2 cut(s)	147, 1617
Alw26I	GTCTC	2 cut(s)	296, 1099
AlwI	GGATC	2 cut(s)	245, 2346
AlwNI	CAGNNNCTG	3 cut(s)	982, 1022, 1955
Ama87I	CYCGRG	1 cut(s)	1333
AoxI	GGCC	8 cut(s)	50, 1056, 1120, 1225, 1563, 1569, 1675, 2503
ApeKI	GCWGC	5 cut(s)	466, 1771, 1854, 1955, 2407
ApoI	RAATTY	6 cut(s)	41, 116, 599, 1467, 1704, 2320
AspLEI	GCGC	7 cut(s)	1048, 1092, 1221, 1297, 1299, 1462, 2025
AspS9I	GGNCC	5 cut(s)	51, 1169, 1226, 1351, 1440
AsuC2I	CCSGG	1 cut(s)	1167
AsuHPI	GGTGA	3 cut(s)	1121, 1645, 1900
AvaI	CYCGRG	1 cut(s)	1333
AvaII	GGWCC	3 cut(s)	1169, 1351, 1440
AxyI	CCTNAGG	1 cut(s)	387
BaeI	ACNNNNGTAYC	2 cut(s)	1785, 1818
BalI	TGGCCA	3 cut(s)	1565, 1571, 2505
BanI	GGYRCC	2 cut(s)	1089, 1152
BanII	GRGCYC	1 cut(s)	1673
BauI	CACGAG	1 cut(s)	1346
Bbv12I	GWGCWC	2 cut(s)	147, 1617
BbvI	GCAGC	5 cut(s)	478, 1783, 1841, 1942, 2419
BccI	CCATC	7 cut(s)	1134, 1206, 1814, 1844, 1938, 2150, 2306
BceAI	ACGGC	2 cut(s)	1103, 1399
BcgI	CGANNNNNNTGC	4 cut(s)	1375, 1409, 1594, 1628
BciT130I	CCWGG	7 cut(s)	1065, 1116, 1224, 1553, 1610, 2299, 2425
BciVI	GTATCC	1 cut(s)	794
BcnI	CCSGG	1 cut(s)	1167
BcoDI	GTCTC	2 cut(s)	296, 1099
BcuI	ACTAGT	1 cut(s)	169
BfaI	CTAG	5 cut(s)	170, 1817, 1836, 2165, 2282
BfmI	CTRYAG	1 cut(s)	1699
BfoI	RGCGCY	1 cut(s)	1093
BfrI	CTTAAG	1 cut(s)	2384
BfuAI	ACCTGC	1 cut(s)	1164
BfuI	GTATCC	1 cut(s)	794
BisI	GCNGC	6 cut(s)	467, 1123, 1772, 1855, 1956, 2408
BlpI	GCTNAGC	1 cut(s)	159
BlsI	GCNGC	6 cut(s)	468, 1124, 1773, 1856, 1957, 2409
BmcAI	AGTACT	2 cut(s)	711, 2482
Bme1390I	CCNGG	8 cut(s)	1065, 1116, 1167, 1224, 1553, 1610, 2299, 2425
Bme18I	GGWCC	3 cut(s)	1169, 1351, 1440
BmeT110I	CYCGRG	1 cut(s)	1333
BmgT120I	GGNCC	5 cut(s)	51, 1169, 1226, 1351, 1440
BmiI	GGNNCC	5 cut(s)	1091, 1154, 1171, 1353, 1672
BmrFI	CCNGG	8 cut(s)	1065, 1116, 1167, 1224, 1553, 1610, 2299, 2425
BmrI	ACTGGG	1 cut(s)	961
BmsI	GCATC	7 cut(s)	517, 611, 994, 1395, 1630, 1735, 2263
BmuI	ACTGGG	1 cut(s)	961
BplI	GAGNNNNNCTC	2 cut(s)	1096, 1128
BpmI	CTGGAG	2 cut(s)	220, 2035
Bpu1102I	GCTNAGC	1 cut(s)	159
BpuMI	CCSGG	1 cut(s)	1167
BsaBI	GATNNNNATC	2 cut(s)	654, 2337
BsaHI	GRCGYC	1 cut(s)	1090
BsaJI	CCNNGG	8 cut(s)	1049, 1085, 1222, 1566, 1608, 2298, 2424, 2506
BsaWI	WCCGGW	2 cut(s)	1437, 1442
BsaXI	ACNNNNNCTCC	6 cut(s)	255, 258, 285, 288, 1077, 1107
Bsc4I	CCNNNNNNNGG	4 cut(s)	1223, 1348, 1684, 1902
Bse1I	ACTGG	1 cut(s)	967
Bse21I	CCTNAGG	1 cut(s)	387
Bse3DI	GCAATG	1 cut(s)	1048
Bse8I	GATNNNNATC	2 cut(s)	654, 2337
BseBI	CCWGG	7 cut(s)	1065, 1116, 1224, 1553, 1610, 2299, 2425
BseDI	CCNNGG	8 cut(s)	1049, 1085, 1222, 1566, 1608, 2298, 2424, 2506
BseGI	GGATG	7 cut(s)	626, 1198, 1311, 1911, 1949, 2278, 2371
BseJI	GATNNNNATC	2 cut(s)	654, 2337
BseLI	CCNNNNNNNGG	4 cut(s)	1223, 1348, 1684, 1902
BseMI	GCAATG	1 cut(s)	1048
BseMII	CTCAG	4 cut(s)	160, 401, 1029, 1933
BseNI	ACTGG	1 cut(s)	967
BsePI	GCGCGC	1 cut(s)	1295
BseRI	GAGGAG	3 cut(s)	263, 266, 952
BseXI	GCAGC	5 cut(s)	478, 1783, 1841, 1942, 2419
BseYI	CCCAGC	4 cut(s)	154, 1096, 1100, 1496
Bsh1236I	CGCG	5 cut(s)	1219, 1297, 1427, 1460, 2025
BshFI	GGCC	8 cut(s)	52, 1058, 1122, 1227, 1565, 1571, 1677, 2505
BshNI	GGYRCC	2 cut(s)	1089, 1152
BsiHKAI	GWGCWC	2 cut(s)	147, 1617
BsiHKCI	CYCGRG	1 cut(s)	1333
BsiSI	CCGG	6 cut(s)	1150, 1167, 1438, 1443, 1674, 1685
BslFI	GGGAC	2 cut(s)	1337, 1937
BslI	CCNNNNNNNGG	4 cut(s)	1223, 1348, 1684, 1902
BsmAI	GTCTC	2 cut(s)	296, 1099
BsmFI	GGGAC	2 cut(s)	1337, 1937
BsnI	GGCC	8 cut(s)	52, 1058, 1122, 1227, 1565, 1571, 1677, 2505
BsoBI	CYCGRG	1 cut(s)	1333
Bsp1286I	GDGCHC	3 cut(s)	147, 1617, 1673
Bsp1407I	TGTACA	1 cut(s)	690
Bsp143I	GATC	2 cut(s)	250, 2338
Bsp1720I	GCTNAGC	1 cut(s)	159
Bsp19I	CCATGG	2 cut(s)	1049, 1566
BspACI	CCGC	7 cut(s)	1123, 1185, 1217, 1318, 1323, 1330, 2219
BspANI	GGCC	8 cut(s)	52, 1058, 1122, 1227, 1565, 1571, 1677, 2505
BspCNI	CTCAG	4 cut(s)	159, 400, 1028, 1932
BspFNI	CGCG	5 cut(s)	1219, 1297, 1427, 1460, 2025
BspHI	TCATGA	1 cut(s)	2139
BspLI	GGNNCC	5 cut(s)	1091, 1154, 1171, 1353, 1672
BspMI	ACCTGC	1 cut(s)	1164
BspPI	GGATC	2 cut(s)	245, 2346
BspT107I	GGYRCC	2 cut(s)	1089, 1152
BspTI	CTTAAG	1 cut(s)	2384
BsrBI	CCGCTC	2 cut(s)	1187, 1332
BsrDI	GCAATG	1 cut(s)	1048
BsrGI	TGTACA	1 cut(s)	690
BsrI	ACTGG	1 cut(s)	967
BssECI	CCNNGG	8 cut(s)	1049, 1085, 1222, 1566, 1608, 2298, 2424, 2506
BssHII	GCGCGC	1 cut(s)	1295
BssMI	GATC	2 cut(s)	250, 2338
BssNI	GRCGYC	1 cut(s)	1090
BssSI	CACGAG	1 cut(s)	1346
BssT1I	CCWWGG	3 cut(s)	1049, 1566, 2506
Bst2BI	CACGAG	1 cut(s)	1346
Bst2UI	CCWGG	7 cut(s)	1065, 1116, 1224, 1553, 1610, 2299, 2425
Bst6I	CTCTTC	3 cut(s)	284, 869, 1209
BstACI	GRCGYC	1 cut(s)	1090
BstAFI	CTTAAG	1 cut(s)	2384
BstAPI	GCANNNNNTGC	2 cut(s)	1955, 2527
BstAUI	TGTACA	1 cut(s)	690
BstC8I	GCNNGC	2 cut(s)	1297, 2528
BstDEI	CTNAG	9 cut(s)	146, 159, 387, 797, 952, 1015, 1752, 1919, 2432
BstDSI	CCRYGG	3 cut(s)	1049, 1085, 1566
BstEII	GGTNACC	1 cut(s)	2159
BstENI	CCTNNNNNAGG	1 cut(s)	1346
BstF5I	GGATG	7 cut(s)	626, 1198, 1311, 1911, 1949, 2278, 2371
BstFNI	CGCG	5 cut(s)	1219, 1297, 1427, 1460, 2025
BstH2I	RGCGCY	1 cut(s)	1093
BstHHI	GCGC	7 cut(s)	1048, 1092, 1221, 1297, 1299, 1462, 2025
BstKTI	GATC	2 cut(s)	253, 2341
BstMAI	GTCTC	2 cut(s)	296, 1099
BstMBI	GATC	2 cut(s)	250, 2338
BstMWI	GCNNNNNNNGC	4 cut(s)	1193, 1955, 2300, 2527
BstNI	CCWGG	7 cut(s)	1065, 1116, 1224, 1553, 1610, 2299, 2425
BstNSI	RCATGY	1 cut(s)	2530
BstPI	GGTNACC	1 cut(s)	2159
BstSCI	CCNGG	8 cut(s)	1063, 1114, 1165, 1222, 1551, 1608, 2297, 2423
BstSFI	CTRYAG	1 cut(s)	1699
BstUI	CGCG	5 cut(s)	1219, 1297, 1427, 1460, 2025
BstV1I	GCAGC	5 cut(s)	478, 1783, 1841, 1942, 2419
Bsu36I	CCTNAGG	1 cut(s)	387
BsuI	GTATCC	1 cut(s)	794
BsuRI	GGCC	8 cut(s)	52, 1058, 1122, 1227, 1565, 1571, 1677, 2505
BtgI	CCRYGG	3 cut(s)	1049, 1085, 1566
BtsCI	GGATG	7 cut(s)	626, 1198, 1311, 1911, 1949, 2278, 2371
BtsIMutI	CAGTG	4 cut(s)	549, 642, 2207, 2424
BveI	ACCTGC	1 cut(s)	1164
Cac8I	GCNNGC	2 cut(s)	1297, 2528
CaiI	CAGNNNCTG	3 cut(s)	982, 1022, 1955
CciI	TCATGA	1 cut(s)	2139
CfoI	GCGC	7 cut(s)	1048, 1092, 1221, 1297, 1299, 1462, 2025
Cfr13I	GGNCC	5 cut(s)	51, 1169, 1226, 1351, 1440
CpoI	CGGWCCG	1 cut(s)	1440
CseI	GACGC	4 cut(s)	216, 1433, 1697, 2137
CsiI	ACCWGGT	1 cut(s)	1551
Csp6I	GTAC	6 cut(s)	6, 554, 691, 710, 1960, 2481
CspI	CGGWCCG	1 cut(s)	1440
CviQI	GTAC	6 cut(s)	6, 554, 691, 710, 1960, 2481
DdeI	CTNAG	9 cut(s)	146, 159, 387, 797, 952, 1015, 1752, 1919, 2432
DinI	GGCGCC	1 cut(s)	1091
DpnI	GATC	2 cut(s)	252, 2340
DpnII	GATC	2 cut(s)	250, 2338
DraI	TTTAAA	2 cut(s)	46, 115
EaeI	YGGCCR	5 cut(s)	1120, 1563, 1569, 1675, 2503
Eam1104I	CTCTTC	3 cut(s)	284, 869, 1209
EarI	CTCTTC	3 cut(s)	284, 869, 1209
Eco130I	CCWWGG	3 cut(s)	1049, 1566, 2506
Eco147I	AGGCCT	1 cut(s)	1058
Eco24I	GRGCYC	1 cut(s)	1673
Eco47I	GGWCC	3 cut(s)	1169, 1351, 1440
Eco81I	CCTNAGG	1 cut(s)	387
Eco88I	CYCGRG	1 cut(s)	1333
Eco91I	GGTNACC	1 cut(s)	2159
EcoNI	CCTNNNNNAGG	1 cut(s)	1346
EcoO109I	RGGNCCY	2 cut(s)	1226, 1351
EcoO65I	GGTNACC	1 cut(s)	2159
EcoRI	GAATTC	1 cut(s)	1704
EcoRII	CCWGG	7 cut(s)	1063, 1114, 1222, 1551, 1608, 2297, 2423
EcoT14I	CCWWGG	3 cut(s)	1049, 1566, 2506
EcoT38I	GRGCYC	1 cut(s)	1673
EgeI	GGCGCC	1 cut(s)	1091
EheI	GGCGCC	1 cut(s)	1091
ErhI	CCWWGG	3 cut(s)	1049, 1566, 2506
FalI	AAGNNNNNCTT	2 cut(s)	790, 822
FaqI	GGGAC	2 cut(s)	1337, 1937
FauI	CCCGC	1 cut(s)	1337
FauNDI	CATATG	1 cut(s)	2361
Fnu4HI	GCNGC	6 cut(s)	467, 1123, 1772, 1855, 1956, 2408
FokI	GGATG	7 cut(s)	633, 1185, 1298, 1918, 1956, 2285, 2378
FriOI	GRGCYC	1 cut(s)	1673
Fsp4HI	GCNGC	6 cut(s)	467, 1123, 1772, 1855, 1956, 2408
FspBI	CTAG	5 cut(s)	170, 1817, 1836, 2165, 2282
GlaI	GCGC	7 cut(s)	1047, 1091, 1220, 1296, 1298, 1461, 2024
GluI	GCNGC	6 cut(s)	467, 1123, 1772, 1855, 1956, 2408
GsaI	CCCAGC	4 cut(s)	158, 1100, 1104, 1500
GsuI	CTGGAG	2 cut(s)	220, 2035
HaeII	RGCGCY	1 cut(s)	1093
HaeIII	GGCC	8 cut(s)	52, 1058, 1122, 1227, 1565, 1571, 1677, 2505
HapII	CCGG	6 cut(s)	1150, 1167, 1438, 1443, 1674, 1685
HgaI	GACGC	4 cut(s)	216, 1433, 1697, 2137
HhaI	GCGC	7 cut(s)	1048, 1092, 1221, 1297, 1299, 1462, 2025
Hin1I	GRCGYC	1 cut(s)	1090
Hin6I	GCGC	7 cut(s)	1046, 1090, 1219, 1295, 1297, 1460, 2023
HinP1I	GCGC	7 cut(s)	1046, 1090, 1219, 1295, 1297, 1460, 2023
HinfI	GANTC	8 cut(s)	607, 956, 1019, 1338, 1397, 1601, 2261, 2285
HpaII	CCGG	6 cut(s)	1150, 1167, 1438, 1443, 1674, 1685
HphI	GGTGA	3 cut(s)	1121, 1645, 1900
Hpy166II	GTNNAC	4 cut(s)	1004, 1962, 2328, 2391
Hpy188I	TCNGA	5 cut(s)	149, 193, 1018, 1881, 2290
Hpy188III	TCNNGA	6 cut(s)	199, 237, 389, 1335, 1936, 2140
Hpy8I	GTNNAC	4 cut(s)	1004, 1962, 2328, 2391
Hpy99I	CGWCG	1 cut(s)	1427
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1193, 1955, 2300, 2527
HpyF3I	CTNAG	9 cut(s)	146, 159, 387, 797, 952, 1015, 1752, 1919, 2432
Hsp92I	GRCGYC	1 cut(s)	1090
HspAI	GCGC	7 cut(s)	1046, 1090, 1219, 1295, 1297, 1460, 2023
KasI	GGCGCC	1 cut(s)	1089
Kzo9I	GATC	2 cut(s)	250, 2338
LmnI	GCTCC	1 cut(s)	1676
Lsp1109I	GCAGC	5 cut(s)	478, 1783, 1841, 1942, 2419
LweI	GCATC	7 cut(s)	517, 611, 994, 1395, 1630, 1735, 2263
MabI	ACCWGGT	1 cut(s)	1551
MaeI	CTAG	5 cut(s)	170, 1817, 1836, 2165, 2282
MaeIII	GTNAC	4 cut(s)	31, 608, 2085, 2159
MalI	GATC	2 cut(s)	252, 2340
MbiI	CCGCTC	2 cut(s)	1187, 1332
MboI	GATC	2 cut(s)	250, 2338
MhlI	GDGCHC	3 cut(s)	147, 1617, 1673
MlsI	TGGCCA	3 cut(s)	1565, 1571, 2505
MluI	ACGCGT	1 cut(s)	1425
MluNI	TGGCCA	3 cut(s)	1565, 1571, 2505
Mly113I	GGCGCC	1 cut(s)	1090
MlyI	GAGTC	1 cut(s)	616
MmeI	TCCRAC	1 cut(s)	811
Mox20I	TGGCCA	3 cut(s)	1565, 1571, 2505
MscI	TGGCCA	3 cut(s)	1565, 1571, 2505
MslI	CAYNNNNRTG	4 cut(s)	318, 1511, 2248, 2364
Msp20I	TGGCCA	3 cut(s)	1565, 1571, 2505
MspA1I	CMGCKG	2 cut(s)	1100, 2410
MspCI	CTTAAG	1 cut(s)	2384
MspI	CCGG	6 cut(s)	1150, 1167, 1438, 1443, 1674, 1685
MspR9I	CCNGG	8 cut(s)	1065, 1116, 1167, 1224, 1553, 1610, 2299, 2425
MvaI	CCWGG	7 cut(s)	1065, 1116, 1224, 1553, 1610, 2299, 2425
MvnI	CGCG	5 cut(s)	1219, 1297, 1427, 1460, 2025
MwoI	GCNNNNNNNGC	4 cut(s)	1193, 1955, 2300, 2527
NarI	GGCGCC	1 cut(s)	1090
NciI	CCSGG	1 cut(s)	1167
NcoI	CCATGG	2 cut(s)	1049, 1566
NdeI	CATATG	1 cut(s)	2361
NdeII	GATC	2 cut(s)	250, 2338
NlaIV	GGNNCC	5 cut(s)	1091, 1154, 1171, 1353, 1672
NmeAIII	GCCGAG	2 cut(s)	1271, 2196
NmuCI	GTSAC	2 cut(s)	608, 2085
NspI	RCATGY	1 cut(s)	2530
PaeI	GCATGC	1 cut(s)	2530
PagI	TCATGA	1 cut(s)	2139
PaqCI	CACCTGC	1 cut(s)	1164
PauI	GCGCGC	1 cut(s)	1295
PceI	AGGCCT	1 cut(s)	1058
PfeI	GAWTC	7 cut(s)	956, 1019, 1338, 1397, 1601, 2261, 2285
PfoI	TCCNGGA	1 cut(s)	1165
PkrI	GCNGC	6 cut(s)	468, 1124, 1773, 1856, 1957, 2409
PleI	GAGTC	1 cut(s)	615
PluTI	GGCGCC	1 cut(s)	1093
PpsI	GAGTC	1 cut(s)	615
PpuMI	RGGWCCY	1 cut(s)	1351
PsiI	TTATAA	3 cut(s)	917, 1806, 2541
Psp5II	RGGWCCY	1 cut(s)	1351
Psp6I	CCWGG	7 cut(s)	1063, 1114, 1222, 1551, 1608, 2297, 2423
PspEI	GGTNACC	1 cut(s)	2159
PspFI	CCCAGC	4 cut(s)	154, 1096, 1100, 1496
PspGI	CCWGG	7 cut(s)	1063, 1114, 1222, 1551, 1608, 2297, 2423
PspN4I	GGNNCC	5 cut(s)	1091, 1154, 1171, 1353, 1672
PspPI	GGNCC	5 cut(s)	51, 1169, 1226, 1351, 1440
PspPPI	RGGWCCY	1 cut(s)	1351
PsrI	GAACNNNNNNTAC	2 cut(s)	321, 353
PstNI	CAGNNNCTG	3 cut(s)	982, 1022, 1955
PteI	GCGCGC	1 cut(s)	1295
PvuII	CAGCTG	2 cut(s)	1100, 2410
RsaI	GTAC	6 cut(s)	7, 555, 692, 711, 1961, 2482
RsaNI	GTAC	6 cut(s)	6, 554, 691, 710, 1960, 2481
RseI	CAYNNNNRTG	4 cut(s)	318, 1511, 2248, 2364
Rsr2I	CGGWCCG	1 cut(s)	1440
RsrII	CGGWCCG	1 cut(s)	1440
SatI	GCNGC	6 cut(s)	467, 1123, 1772, 1855, 1956, 2408
Sau3AI	GATC	2 cut(s)	250, 2338
Sau96I	GGNCC	5 cut(s)	51, 1169, 1226, 1351, 1440
ScaI	AGTACT	2 cut(s)	711, 2482
SchI	GAGTC	1 cut(s)	616
ScrFI	CCNGG	8 cut(s)	1065, 1116, 1167, 1224, 1553, 1610, 2299, 2425
SduI	GDGCHC	3 cut(s)	147, 1617, 1673
SexAI	ACCWGGT	1 cut(s)	1551
SfaNI	GCATC	7 cut(s)	517, 611, 994, 1395, 1630, 1735, 2263
SfcI	CTRYAG	1 cut(s)	1699
SfoI	GGCGCC	1 cut(s)	1091
SinI	GGWCC	3 cut(s)	1169, 1351, 1440
SmiI	ATTTAAAT	2 cut(s)	46, 115
SmiMI	CAYNNNNRTG	4 cut(s)	318, 1511, 2248, 2364
SmlI	CTYRAG	1 cut(s)	2384
SmoI	CTYRAG	1 cut(s)	2384
SpeI	ACTAGT	1 cut(s)	169
SphI	GCATGC	1 cut(s)	2530
SseBI	AGGCCT	1 cut(s)	1058
SsiI	CCGC	7 cut(s)	1123, 1185, 1217, 1318, 1323, 1330, 2219
SspDI	GGCGCC	1 cut(s)	1089
SspI	AATATT	1 cut(s)	1915
SspMI	CTAG	5 cut(s)	170, 1817, 1836, 2165, 2282
StuI	AGGCCT	1 cut(s)	1058
StyD4I	CCNGG	8 cut(s)	1063, 1114, 1165, 1222, 1551, 1608, 2297, 2423
StyI	CCWWGG	3 cut(s)	1049, 1566, 2506
SwaI	ATTTAAAT	2 cut(s)	46, 115
TaqI	TCGA	7 cut(s)	1249, 1395, 1422, 1452, 1604, 1735, 1898
TatI	WGTACW	4 cut(s)	553, 690, 709, 2480
TauI	GCSGC	1 cut(s)	1125
TfiI	GAWTC	7 cut(s)	956, 1019, 1338, 1397, 1601, 2261, 2285
TscAI	CASTG	4 cut(s)	556, 642, 2214, 2424
TseFI	GTSAC	2 cut(s)	608, 2085
TseI	GCWGC	5 cut(s)	466, 1771, 1854, 1955, 2407
Tsp45I	GTSAC	2 cut(s)	608, 2085
TspDTI	ATGAA	5 cut(s)	468, 630, 1388, 2156, 2382
TspGWI	ACGGA	2 cut(s)	2017, 2351
TspRI	CASTG	4 cut(s)	556, 642, 2214, 2424
Vha464I	CTTAAG	1 cut(s)	2384
VpaK11BI	GGWCC	3 cut(s)	1169, 1351, 1440
XagI	CCTNNNNNAGG	1 cut(s)	1346
XapI	RAATTY	6 cut(s)	41, 116, 599, 1467, 1704, 2320
XceI	RCATGY	1 cut(s)	2530
XspI	CTAG	5 cut(s)	170, 1817, 1836, 2165, 2282
ZrmI	AGTACT	2 cut(s)	711, 2482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.