Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000993

Physical Location & Seq

Genomic Coordinates Reverse (-)

24955540 .. 24961601

Gene Structure 6062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1140200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGAGGAAGTGGATAGCTCTCGAGGTTTCCTCAAAGACGTTAAGCGCCTCGTTCTCAAGGTTGGGACTGCCGTTGTGACTCGAAACGACGGAAGAATTGCTCTTGGAAGATTAGGCGCGCTTTGTGAGCAGCTTAAGGAGTTGAACTCTCAAGGATATGAGATTATATTGGTGTCATCTGGTGCTGTGGGCCTCGGCCGTCAGCGGCTCAGATACCGGAAATTAGTTAACAGCAGCTTTGCTGATCTCCAGAAACCACAAGTTGAACTTGACGGGAAGGCGTGTGCAGCTGTTGGACAGAACTGTCTGATGGCTCTCTACGATACGTTGTTTAGTCAGTTGGATGTGTCGTCAGCTCAGCTTCTTGTAACAGATAGCGATTTTAGGGATAGAGATTTTAGAAAGCAACTAGGTGAAACTATGAAATCGTTGTTATCTCTGAGGGTTATTCCTATATTTAATGAAAACGACGCAGTCAGTACGAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGATAATGACAGTTTGGCAGCTCTACTGGCTTTGGAGCTAAAGGCTGATCTTCTTATTCTTTTGAGTGACGTTGATGGTCTATACAGCGGGCCTCCAAGTGACCCCCGTTCGAAGCTTATCCATACATACGTAAAGGAGAAGCATCAGACTGAAATTACTTTTGGAGACAAATCTAGAGTGGGAAGAGGGGGTATGACTGCTAAAGTAAAAGCTGCTGTCAATGCAGCTTATGCTGGCATCCCTGTTGTTATTACAAGTGGGTTTGCTGCTGGAAACATCTCTAAAGTCCTTCAAGGGCAACGTATTGGTACCCTCTTTCACCAAGATGCTAATTTATGGACACCAGTTAAAGAAATTGATGCAAGAGGGATGGCAGTTGCAGCCAGGGAAAGTTCCAGAAGGCTTCAGGCCATGACTTCAGAAGACAGGAAAAAAATTCTTCTGGATGTAGCTGATGCCCTTGAAGCAAATGTAAAATTGATCAACATTGAAAATGAAGCTGATGTTTCTGCGGCACAACGAGCAGGATATGAAAAATCATTGATATCTCGGCTGGCTCTGAAGCCTGGGAAGATTACAAGCCTTGCAAAGTCTATTCGTGTGCTTGCAAACATGGAAGATCCAATTGGTCGTGTTTTGAAAAAAACTGAGCTTGCAGATGGTCTTGTCTTGGAGAAAACATCAAGCCCACTGGGTGTTCTCCTGATTGTATTTGAGTCTCGTCCTGAAGCGCTAGTACAGATAGCTTCATTAGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAGGGGGGAAAGGAGGCTAAGAGATCAAATGCAATTTTGCACAAGATTATCACCGAAGCCATCCCAGAGAGTGTTGGTGGAAAACTAATTGGACTTGTGACTTCAAGAGAAGAGATTCCAGATTTGCTTAAGCATGATGACATGATTGATCTTGTGATCCCAAGAGGCAGCAATAAACTGGTTTCTCAAGTCAAGAATTCGACCAAGATTCCAGTTCTCGGTCATGCTGATGGAATATGCCATGTGTATATTGATAAGTCTGCTAATATGGATATGGCAAAGAGAATTGTTTTGGATGCAAAAATAGATTATCCAGCAGCGTGTAATGCAATGGAAACACTTCTAGTCCATAATGATTTGAAGAGTACAGCCGCATTTAATGATCTTGTTGTTGAGCTTCGCACTGCAGGTGTTACTTTATATGGTGGACCAAGAGCAAGCGTCTTGCTCAGGATTCCTGAGGCACATTCGTTCCACCATGAGTACAGTTCAATGGCTTGCACTGTTGAGTTTGTTGACGATGTGCATGCAGCAATTGATCATATACATGAACATGGAAGTGCACACACTGATTGCGTCATTGCAGAAGACCAAGAAGCTGTGGATGCGTTTTTAGGTAAAGTTGACAGTGCTGCTGTTTTCCACAATGCAAGCCCAAGATTCTGCGATGGGGCTCGATTTGGACTTGGTGCAGAGGTCGGGATAAGCACAAGTCGAATTCATGCTCGGGGTCCGGTAGGAGTCGAAGGACTGTTAACAACTCGATGGATTCTGAGAGGACATGGACAAATTGTGGACGGTGATAAGGGGGTTACTTACACCCACAAGGACCTCCCAATTGAGCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004350 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006082 GO:0006520 GO:0006560 GO:0006561 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009555 GO:0009628 GO:0009651 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0016020 GO:0016053 GO:0016491 GO:0016620 GO:0016903 GO:0017084 GO:0018130 GO:0019752 GO:0022414 GO:0022622 GO:0030054 GO:0032501 GO:0032502 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0048229 GO:0048316 GO:0048364 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055044 GO:0055114 GO:0061458 GO:0071704 GO:0099402 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 ko01110 ko01230 map00330 map01100 map01110 map01230

Pfam Domains

Protein Families

AA_kinase Aldedh

Protein Analysis

718

Amino Acids

77.62

Weight (kDa)

6.72

Isoelectric Point (pI)

33.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	15 - 260	6.9e-40	Amino acid kinase family
Aldedh	PF00171	294 - 557	2e-06	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39800 AT2G39800 AT2G39800 AT2G39800 AT3G55610 AT3G55610
fragaria_vesca	FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_7g23420 FvH4_7g23420 FvH4_7g23420 FvH4_7g23430
malus_domestica	MD00G1141100.v1.1 MD01G1140200.v1.1 MD04G1136200.v1.1 MD07G1204500.v1.1 MD12G1150700.v1.1
prunus_persica	Prupe.2G240800_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1
pyrus_communis	pycom01g16070 pycom04g12400 pycom07g19110 pycom12g14450
rosa_chinensis	RchiOBHm_Chr1g0368541 RchiOBHm_Chr1g0368561 RchiOBHm_Chr3g0465091
rosa_laevigata	RLG00000024656 RLG00000027203 RLG00000027204
rosa_multiflora	Rmu_co8458369.1_g000001 Rmu_co8474891.1_g000001 Rmu_sc0003386.1_g000013 Rmu_sc0011394.1_g000007
rosa_roxburghii	Rroxscaffold_4G00288440 Rroxscaffold_4G00288450 Rroxscaffold_6G00415250
rosa_rugosa	Rorug01G0342800 Rorug01G0342900 Rorug03G0075300 Rorug03G0075400
rosa_samantha	Rh1AG350100 Rh1AG350200 Rh1BG313300 Rh1BG313400 Rh1CG328000 Rh1CG328100 Rh1DG344700 Rh1DG344800 Rh3BG139000 Rh3CG141100 Rh3CG149400 Rh3DG140200
rosa_wichuraiana	Rw3G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1703
AasI	GACNNNNNNGTC	1 cut(s)	303
Acc36I	ACCTGC	1 cut(s)	1703
Acc65I	GGTACC	1 cut(s)	830
AccB1I	GGYRCC	1 cut(s)	830
AccII	CGCG	1 cut(s)	119
AciI	CCGC	4 cut(s)	205, 609, 1034, 1677
AclWI	GGATC	2 cut(s)	1136, 1456
AcoI	YGGCCR	1 cut(s)	196
AcsI	RAATTY	3 cut(s)	957, 1501, 2022
AcuI	CTGAAG	4 cut(s)	911, 924, 1103, 1269
AdeI	CACNNNGTG	1 cut(s)	1217
AfaI	GTAC	5 cut(s)	481, 832, 1260, 1672, 1790
AfeI	AGCGCT	1 cut(s)	1254
AfiI	CCNNNNNNNGG	1 cut(s)	1523
AflII	CTTAAG	2 cut(s)	134, 1433
AjnI	CCWGG	2 cut(s)	905, 1087
AjuI	GAANNNNNNNTTGG	4 cut(s)	666, 698, 1131, 1163
Alw21I	GWGCWC	1 cut(s)	1870
Alw26I	GTCTC	2 cut(s)	681, 1245
Alw44I	GTGCAC	1 cut(s)	1866
AlwI	GGATC	2 cut(s)	1136, 1456
Ama87I	CYCGRG	2 cut(s)	21, 2031
Aor51HI	AGCGCT	1 cut(s)	1254
AoxI	GGCC	4 cut(s)	190, 196, 611, 930
ApaLI	GTGCAC	1 cut(s)	1866
ApoI	RAATTY	3 cut(s)	957, 1501, 2022
Asp700I	GAANNNNTTC	2 cut(s)	1419, 1644
Asp718I	GGTACC	1 cut(s)	830
AspLEI	GCGC	4 cut(s)	48, 119, 121, 1255
AspS9I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
AsuHPI	GGTGA	4 cut(s)	425, 833, 1348, 2117
AsuII	TTCGAA	1 cut(s)	632
AvaI	CYCGRG	2 cut(s)	21, 2031
AvaII	GGWCC	3 cut(s)	1733, 2036, 2134
AxyI	CCTNAGG	1 cut(s)	1764
BaeGI	GKGCMC	1 cut(s)	1870
BanI	GGYRCC	1 cut(s)	830
BanII	GRGCYC	2 cut(s)	1981, 2151
BarI	GAAGNNNNNNTAC	2 cut(s)	1242, 1274
BbsI	GAAGAC	2 cut(s)	951, 1899
Bbv12I	GWGCWC	1 cut(s)	1870
BccI	CCATC	8 cut(s)	304, 590, 886, 1175, 1373, 1529, 1967, 2064
BceAI	ACGGC	2 cut(s)	56, 183
BcgI	CGANNNNNNTGC	2 cut(s)	1814, 1848
BciT130I	CCWGG	2 cut(s)	907, 1089
BclI	TGATCA	2 cut(s)	1002, 1843
BcoDI	GTCTC	2 cut(s)	681, 1245
BfaI	CTAG	4 cut(s)	410, 696, 1256, 1649
BfmI	CTRYAG	1 cut(s)	1710
BfoI	RGCGCY	2 cut(s)	49, 1256
BfrI	CTTAAG	2 cut(s)	134, 1433
BfuAI	ACCTGC	1 cut(s)	1703
BlpI	GCTNAGC	1 cut(s)	357
Bme1390I	CCNGG	2 cut(s)	907, 1089
Bme18I	GGWCC	3 cut(s)	1733, 2036, 2134
BmeT110I	CYCGRG	2 cut(s)	21, 2031
BmgT120I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
BmiI	GGNNCC	2 cut(s)	832, 2037
BmrFI	CCNGG	2 cut(s)	907, 1089
BmrI	ACTGGG	1 cut(s)	1223
BmsI	GCATC	7 cut(s)	673, 768, 838, 871, 967, 1591, 1900
BmuI	ACTGGG	1 cut(s)	1223
BpiI	GAAGAC	2 cut(s)	951, 1899
BplI	GAGNNNNNCTC	6 cut(s)	15, 47, 131, 163, 475, 507
BpmI	CTGGAG	1 cut(s)	233
Bpu10I	CCTNAGC	1 cut(s)	1754
Bpu1102I	GCTNAGC	1 cut(s)	357
Bpu14I	TTCGAA	1 cut(s)	632
BpuEI	CTTGAG	3 cut(s)	41, 135, 1476
BsaAI	YACGTR	1 cut(s)	652
BsaJI	CCNNGG	3 cut(s)	193, 906, 1088
BsaWI	WCCGGW	2 cut(s)	216, 2038
Bsc4I	CCNNNNNNNGG	1 cut(s)	1523
Bse1I	ACTGG	5 cut(s)	552, 866, 1218, 1488, 1517
Bse21I	CCTNAGG	1 cut(s)	1764
Bse3DI	GCAATG	2 cut(s)	1641, 1884
BseBI	CCWGG	2 cut(s)	907, 1089
BseDI	CCNNGG	3 cut(s)	193, 906, 1088
BseGI	GGATG	7 cut(s)	349, 759, 897, 973, 1365, 1606, 1915
BseLI	CCNNNNNNNGG	1 cut(s)	1523
BseMI	GCAATG	2 cut(s)	1641, 1884
BseMII	CTCAG	7 cut(s)	223, 371, 431, 1161, 1755, 1768, 2069
BseNI	ACTGG	5 cut(s)	552, 866, 1218, 1488, 1517
BsePI	GCGCGC	1 cut(s)	117
BseSI	GKGCMC	1 cut(s)	1870
BseX3I	CGGCCG	1 cut(s)	196
BsgI	GTGCAG	2 cut(s)	306, 2016
Bsh1236I	CGCG	1 cut(s)	119
Bsh1285I	CGRYCG	1 cut(s)	199
BshFI	GGCC	4 cut(s)	192, 198, 613, 932
BshNI	GGYRCC	1 cut(s)	830
BsiEI	CGRYCG	1 cut(s)	199
BsiHKAI	GWGCWC	1 cut(s)	1870
BsiHKCI	CYCGRG	2 cut(s)	21, 2031
BsiSI	CCGG	2 cut(s)	217, 2039
BslFI	GGGAC	1 cut(s)	79
BslI	CCNNNNNNNGG	1 cut(s)	1523
BsmAI	GTCTC	2 cut(s)	681, 1245
BsmFI	GGGAC	1 cut(s)	79
BsnI	GGCC	4 cut(s)	192, 198, 613, 932
BsoBI	CYCGRG	2 cut(s)	21, 2031
Bsp119I	TTCGAA	1 cut(s)	632
Bsp1286I	GDGCHC	3 cut(s)	1870, 1981, 2151
Bsp143I	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
Bsp1720I	GCTNAGC	1 cut(s)	357
BspACI	CCGC	4 cut(s)	205, 609, 1034, 1677
BspANI	GGCC	4 cut(s)	192, 198, 613, 932
BspCNI	CTCAG	7 cut(s)	222, 370, 432, 1162, 1756, 1767, 2070
BspFNI	CGCG	1 cut(s)	119
BspLI	GGNNCC	2 cut(s)	832, 2037
BspMAI	CTGCAG	1 cut(s)	1714
BspMI	ACCTGC	1 cut(s)	1703
BspPI	GGATC	2 cut(s)	1136, 1456
BspT104I	TTCGAA	1 cut(s)	632
BspT107I	GGYRCC	1 cut(s)	830
BspTI	CTTAAG	2 cut(s)	134, 1433
BsrDI	GCAATG	2 cut(s)	1641, 1884
BsrI	ACTGG	5 cut(s)	552, 866, 1218, 1488, 1517
BssECI	CCNNGG	3 cut(s)	193, 906, 1088
BssHII	GCGCGC	1 cut(s)	117
BssMI	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
Bst2UI	CCWGG	2 cut(s)	907, 1089
Bst4CI	ACNGT	7 cut(s)	305, 533, 1793, 1810, 1934, 2058, 2105
Bst6I	CTCTTC	3 cut(s)	700, 1410, 1661
BstAFI	CTTAAG	2 cut(s)	134, 1433
BstAPI	GCANNNNNTGC	1 cut(s)	752
BstBAI	YACGTR	1 cut(s)	652
BstBI	TTCGAA	1 cut(s)	632
BstDEI	CTNAG	8 cut(s)	209, 357, 440, 1170, 1323, 1754, 1764, 2078
BstF5I	GGATG	7 cut(s)	349, 759, 897, 973, 1365, 1606, 1915
BstFNI	CGCG	1 cut(s)	119
BstH2I	RGCGCY	2 cut(s)	49, 1256
BstHHI	GCGC	4 cut(s)	48, 119, 121, 1255
BstKTI	GATC	9 cut(s)	247, 571, 1005, 1144, 1331, 1456, 1464, 1690, 1846
BstMAI	GTCTC	2 cut(s)	681, 1245
BstMBI	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
BstMCI	CGRYCG	1 cut(s)	199
BstNI	CCWGG	2 cut(s)	907, 1089
BstNSI	RCATGY	1 cut(s)	1835
BstSCI	CCNGG	2 cut(s)	905, 1087
BstSFI	CTRYAG	1 cut(s)	1710
BstSLI	GKGCMC	1 cut(s)	1870
BstSNI	TACGTA	1 cut(s)	652
BstUI	CGCG	1 cut(s)	119
BstV2I	GAAGAC	2 cut(s)	951, 1899
BstX2I	RGATCY	1 cut(s)	1141
BstYI	RGATCY	1 cut(s)	1141
BstZI	CGGCCG	1 cut(s)	196
Bsu36I	CCTNAGG	1 cut(s)	1764
BsuRI	GGCC	4 cut(s)	192, 198, 613, 932
BtgZI	GCGATG	1 cut(s)	1986
BtsCI	GGATG	7 cut(s)	349, 759, 897, 973, 1365, 1606, 1915
BtsI	GCAGTG	1 cut(s)	1707
BtsIMutI	CAGTG	5 cut(s)	1211, 1707, 1806, 1872, 1939
BveI	ACCTGC	1 cut(s)	1703
CfoI	GCGC	4 cut(s)	48, 119, 121, 1255
Cfr13I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
CseI	GACGC	3 cut(s)	479, 1735, 1870
Csp6I	GTAC	5 cut(s)	480, 831, 1259, 1671, 1789
CviQI	GTAC	5 cut(s)	480, 831, 1259, 1671, 1789
DdeI	CTNAG	8 cut(s)	209, 357, 440, 1170, 1323, 1754, 1764, 2078
DpnI	GATC	9 cut(s)	246, 570, 1004, 1143, 1330, 1455, 1463, 1689, 1845
DpnII	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
DraIII	CACNNNGTG	1 cut(s)	1217
DrdI	GACNNNNNNGTC	1 cut(s)	303
DseDI	GACNNNNNNGTC	1 cut(s)	303
EaeI	YGGCCR	1 cut(s)	196
EagI	CGGCCG	1 cut(s)	196
Eam1104I	CTCTTC	3 cut(s)	700, 1410, 1661
EarI	CTCTTC	3 cut(s)	700, 1410, 1661
EclXI	CGGCCG	1 cut(s)	196
Eco105I	TACGTA	1 cut(s)	652
Eco24I	GRGCYC	2 cut(s)	1981, 2151
Eco32I	GATATC	1 cut(s)	1068
Eco47I	GGWCC	3 cut(s)	1733, 2036, 2134
Eco47III	AGCGCT	1 cut(s)	1254
Eco52I	CGGCCG	1 cut(s)	196
Eco57I	CTGAAG	4 cut(s)	911, 924, 1103, 1269
Eco81I	CCTNAGG	1 cut(s)	1764
Eco88I	CYCGRG	2 cut(s)	21, 2031
EcoO109I	RGGNCCY	1 cut(s)	2134
EcoRI	GAATTC	2 cut(s)	1501, 2022
EcoRII	CCWGG	2 cut(s)	905, 1087
EcoRV	GATATC	1 cut(s)	1068
EcoT38I	GRGCYC	2 cut(s)	1981, 2151
FalI	AAGNNNNNCTT	2 cut(s)	252, 284
FaqI	GGGAC	1 cut(s)	79
FauI	CCCGC	1 cut(s)	602
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	2 cut(s)	1002, 1843
FokI	GGATG	7 cut(s)	356, 746, 904, 980, 1352, 1613, 1922
FriOI	GRGCYC	2 cut(s)	1981, 2151
FspBI	CTAG	4 cut(s)	410, 696, 1256, 1649
GlaI	GCGC	4 cut(s)	47, 118, 120, 1254
GsuI	CTGGAG	1 cut(s)	233
HaeII	RGCGCY	2 cut(s)	49, 1256
HaeIII	GGCC	4 cut(s)	192, 198, 613, 932
HapII	CCGG	2 cut(s)	217, 2039
HgaI	GACGC	3 cut(s)	479, 1735, 1870
HhaI	GCGC	4 cut(s)	48, 119, 121, 1255
Hin6I	GCGC	4 cut(s)	46, 117, 119, 1253
HinP1I	GCGC	4 cut(s)	46, 117, 119, 1253
HincII	GTYRAC	4 cut(s)	229, 1822, 1930, 2061
HindII	GTYRAC	4 cut(s)	229, 1822, 1930, 2061
HindIII	AAGCTT	1 cut(s)	635
HinfI	GANTC	9 cut(s)	79, 503, 1238, 1420, 1513, 1759, 1965, 2046, 2074
HpaI	GTTAAC	2 cut(s)	229, 2061
HpaII	CCGG	2 cut(s)	217, 2039
HphI	GGTGA	4 cut(s)	425, 833, 1348, 2117
Hpy166II	GTNNAC	7 cut(s)	229, 1733, 1822, 1868, 1930, 2061, 2101
Hpy188I	TCNGA	8 cut(s)	212, 309, 441, 669, 943, 1083, 1283, 2079
Hpy8I	GTNNAC	7 cut(s)	229, 1733, 1822, 1868, 1930, 2061, 2101
Hpy99I	CGWCG	2 cut(s)	92, 473
HpyAV	CCTTC	5 cut(s)	271, 821, 915, 1300, 2045
HpyCH4III	ACNGT	7 cut(s)	305, 533, 1793, 1810, 1934, 2058, 2105
HpyCH4IV	ACGT	5 cut(s)	39, 326, 591, 651, 823
HpyF3I	CTNAG	8 cut(s)	209, 357, 440, 1170, 1323, 1754, 1764, 2078
HpySE526I	ACGT	5 cut(s)	39, 326, 591, 651, 823
HspAI	GCGC	4 cut(s)	46, 117, 119, 1253
KpnI	GGTACC	1 cut(s)	834
Ksp22I	TGATCA	2 cut(s)	1002, 1843
KspAI	GTTAAC	2 cut(s)	229, 2061
Kzo9I	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
LmnI	GCTCC	2 cut(s)	496, 556
LweI	GCATC	7 cut(s)	673, 768, 838, 871, 967, 1591, 1900
MaeI	CTAG	4 cut(s)	410, 696, 1256, 1649
MaeII	ACGT	5 cut(s)	39, 326, 591, 651, 823
MaeIII	GTNAC	7 cut(s)	76, 367, 587, 620, 1402, 1717, 2116
MalI	GATC	9 cut(s)	246, 570, 1004, 1143, 1330, 1455, 1463, 1689, 1845
MboI	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
MfeI	CAATTG	3 cut(s)	1146, 1839, 2142
MflI	RGATCY	1 cut(s)	1141
MhlI	GDGCHC	3 cut(s)	1870, 1981, 2151
MlyI	GAGTC	3 cut(s)	73, 1247, 2055
MmeI	TCCRAC	2 cut(s)	274, 321
MroXI	GAANNNNTTC	2 cut(s)	1419, 1644
MseI	TTAA	8 cut(s)	42, 135, 228, 459, 870, 1434, 1683, 2060
MslI	CAYNNNNRTG	5 cut(s)	846, 1533, 1851, 1857, 1863
MspA1I	CMGCKG	3 cut(s)	205, 290, 609
MspCI	CTTAAG	2 cut(s)	134, 1433
MspI	CCGG	2 cut(s)	217, 2039
MspR9I	CCNGG	2 cut(s)	907, 1089
MunI	CAATTG	3 cut(s)	1146, 1839, 2142
MvaI	CCWGG	2 cut(s)	907, 1089
MvnI	CGCG	1 cut(s)	119
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
NlaIV	GGNNCC	2 cut(s)	832, 2037
NmeAIII	GCCGAG	2 cut(s)	174, 1051
NmuCI	GTSAC	4 cut(s)	76, 587, 620, 1402
NspI	RCATGY	1 cut(s)	1835
NspV	TTCGAA	1 cut(s)	632
PaeI	GCATGC	1 cut(s)	1835
PaeR7I	CTCGAG	1 cut(s)	21
PaqCI	CACCTGC	1 cut(s)	1703
PauI	GCGCGC	1 cut(s)	117
PdmI	GAANNNNTTC	2 cut(s)	1419, 1644
PfeI	GAWTC	6 cut(s)	503, 1420, 1513, 1759, 1965, 2074
PflFI	GACNNNGTC	1 cut(s)	473
PleI	GAGTC	3 cut(s)	73, 1246, 2054
PpsI	GAGTC	3 cut(s)	73, 1246, 2054
Ppu21I	YACGTR	1 cut(s)	652
PpuMI	RGGWCCY	1 cut(s)	2134
Psp5II	RGGWCCY	1 cut(s)	2134
Psp6I	CCWGG	2 cut(s)	905, 1087
PspGI	CCWGG	2 cut(s)	905, 1087
PspN4I	GGNNCC	2 cut(s)	832, 2037
PspPI	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
PspPPI	RGGWCCY	1 cut(s)	2134
PstI	CTGCAG	1 cut(s)	1714
PsuI	RGATCY	1 cut(s)	1141
PsyI	GACNNNGTC	1 cut(s)	473
PteI	GCGCGC	1 cut(s)	117
PvuII	CAGCTG	1 cut(s)	290
RsaI	GTAC	5 cut(s)	481, 832, 1260, 1672, 1790
RsaNI	GTAC	5 cut(s)	480, 831, 1259, 1671, 1789
RseI	CAYNNNNRTG	5 cut(s)	846, 1533, 1851, 1857, 1863
SaqAI	TTAA	8 cut(s)	42, 135, 228, 459, 870, 1434, 1683, 2060
Sau3AI	GATC	9 cut(s)	244, 568, 1002, 1141, 1328, 1453, 1461, 1687, 1843
Sau96I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
SchI	GAGTC	3 cut(s)	73, 1247, 2055
ScrFI	CCNGG	2 cut(s)	907, 1089
SduI	GDGCHC	3 cut(s)	1870, 1981, 2151
SfaNI	GCATC	7 cut(s)	673, 768, 838, 871, 967, 1591, 1900
SfcI	CTRYAG	1 cut(s)	1710
Sfr274I	CTCGAG	1 cut(s)	21
SfuI	TTCGAA	1 cut(s)	632
SinI	GGWCC	3 cut(s)	1733, 2036, 2134
SlaI	CTCGAG	1 cut(s)	21
SmiMI	CAYNNNNRTG	5 cut(s)	846, 1533, 1851, 1857, 1863
SmlI	CTYRAG	6 cut(s)	21, 56, 134, 150, 1433, 1491
SmoI	CTYRAG	6 cut(s)	21, 56, 134, 150, 1433, 1491
SnaBI	TACGTA	1 cut(s)	652
SphI	GCATGC	1 cut(s)	1835
SsiI	CCGC	4 cut(s)	205, 609, 1034, 1677
SspMI	CTAG	4 cut(s)	410, 696, 1256, 1649
StyD4I	CCNGG	2 cut(s)	905, 1087
TaaI	ACNGT	7 cut(s)	305, 533, 1793, 1810, 1934, 2058, 2105
TaiI	ACGT	5 cut(s)	42, 329, 594, 654, 826
TaqI	TCGA	8 cut(s)	22, 82, 632, 1505, 1981, 2020, 2049, 2068
TaqII	GACCGA	1 cut(s)	1514
TatI	WGTACW	3 cut(s)	1258, 1670, 1788
TauI	GCSGC	3 cut(s)	208, 1037, 1679
TfiI	GAWTC	6 cut(s)	503, 1420, 1513, 1759, 1965, 2074
Tru1I	TTAA	8 cut(s)	42, 135, 228, 459, 870, 1434, 1683, 2060
Tru9I	TTAA	8 cut(s)	42, 135, 228, 459, 870, 1434, 1683, 2060
TscAI	CASTG	5 cut(s)	1218, 1714, 1813, 1879, 1939
TseFI	GTSAC	4 cut(s)	76, 587, 620, 1402
Tsp45I	GTSAC	4 cut(s)	76, 587, 620, 1402
TspDTI	ATGAA	7 cut(s)	437, 477, 1032, 1068, 1260, 1869, 2015
TspGWI	ACGGA	1 cut(s)	105
TspRI	CASTG	5 cut(s)	1218, 1714, 1813, 1879, 1939
Tth111I	GACNNNGTC	1 cut(s)	473
Vha464I	CTTAAG	2 cut(s)	134, 1433
VneI	GTGCAC	1 cut(s)	1866
VpaK11BI	GGWCC	3 cut(s)	1733, 2036, 2134
XapI	RAATTY	3 cut(s)	957, 1501, 2022
XbaI	TCTAGA	1 cut(s)	695
XceI	RCATGY	1 cut(s)	1835
XhoI	CTCGAG	1 cut(s)	21
XmnI	GAANNNNTTC	2 cut(s)	1419, 1644
XspI	CTAG	4 cut(s)	410, 696, 1256, 1649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.