Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000993

Physical Location & Seq

Genomic Coordinates Reverse (-)

28197703 .. 28203658

Gene Structure 5956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1204500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGAGGAAGTGGATCATTCTCGAGCTTTCCTCAAAGACGTTAAGCGCCTCGTTATCAAGGTCGGGACTGCCGTTGTGACTCGAAACGACGGAAGAATTGCTCTTGGAAGATTAGGCGCACTTTGTGAGCAGCTGAAGGAGTTGAACTCTCAAGGATATGAGATTATATTGGTGTCATCTGGTGCTGTGGGCCTCGGCAGACAGCGGCTCAGATACCGGAAATTAGTTAACAGCAGCTTTGCTGATCTCCAGAAACCACAAGTTGAACTTGATGGGAAGGCGTGTGCAGCTGTTGGACAGAACTGTCTGATGGCTCTCTACGATACCTTGTTTAGTCAGTTGGATGTATCATCAGCTCAACTTCTTGTAACAGACAGCGATTTTAGGGATAGAGATTTCAGAAGGCAACTCGGTGAAACTATGAAATCGTTGTTATCTCTGAAGGTTATTCCTATATTTAATGAAAACGACGCAGTCAGTACAAGGAGAGCTCCATACGAGGATTCTTCTGGTATATTTTGGGATAATGACAGTTTGGCAGCTCTACTGGCTTTGGAGCTAAAGGCTGATCTTCTTATTCTTTTGAGTGATGTGGATGGTCTATATAGTGGGCCTCCAAGTGACCAACGTTCAAAGCTTATCCATACATACATAAAGGAGAAGCATCAGACTGAAATTACTTTTGGAGACAAATCTAGAGTGGGAAGAGGGGGTATGACTGCTAAAGTAAAAGCTGCTGTCAATGCAGCTTATGCTGGCATCCCTGTTGTTATCACCAGTGGGTTTGCTGCTGGAAACATCTTCAAAGTTCTTCAAGGGCAACGTATTGGTACCCTCTTTCATCAAGATGCACACTTATGGGCACCAGTTAAAGAAATTGATGCAAGAGGGATGGCAGTTGCAGCCAGGGAAAGTTCCAGACGGCTTCAGGCCATGACTTCAGAAGAAAGGAAAAAAATTCTTCTGGATGTAGCTGATGCCCTTGAAACAAATGAAAAATTGATCAACGTTGAAAATGAAGCTGATGTTTCAGAGGCACAACGAGCGGGATATGAAAAATCACTTATAGCTCGGCTGGCTTTGAAGCCTGGGAAGATTACAAGTCTTGCAAAGTCAGTACGTGTGCTTGCAAACATGGAAGATCCAATTGGTCGTGTTTTGAAAAAAACCGAGCTTGCAGATGGTCTTGTCTTGGAGAAAACATCAAGCCCACTGGGTGTTCTTCTGATTGTATTTGAGTCTCGTCCTGAAGCGCTAGTACAGATAGCTTCATTAGCAATCCGAAGTGGGAATGGACTTCTCTTGAAGGGGGGAAAGGAGGCTAAGAGATCAAATGCAATTTTGCACAAGATTATCACCGAAGCCATCCCAGAGAGTGTTAGTGGAAGACTAATTGGGCTTGTGACTTCAAGAGAAGAGATTCCAGATTTGCTTAAGCATGATGACGTGATTGATCTTGTGATCCCAAGAGGCAGCAATAAACTGGTTTCTCAAGTCAAGAATTCGACCAAGATTCCAGTTCTCGGTCATGCCGATGGAATATGCCATGTGTATATTGATAAGTCTGCTAATATGGATATGGCAAAGAGAATTGTTTTGGATGCAAAAATAGATTATCCAGCAGCGTGTAATGCAATGGAGACACTACTTGTCCATAACGATTTGAAGAGTACAACTGCGTTTAATGATCTTGTTGTTGAGCTTTGCATTGCTGGTGTTACTTTATATGGTGGACCAAGGGCAAGTGCCTTGCTCGGGATTCCAGAGGCGCATTCATTCCATCATGAGTACAGTTCAATGGCTTGCACTGTTGAGTTTGTTGACGATGTGCATGCAGCAATTGGTCATATACATGAACACGGAAGTGCACATACCGATTGCATCATTGCAGAAGACCAAGAAGTTGTGGATGCGTTTTTAGGTCAAGTCGACAGTGCTGCTGTTTTCCACAATGCAAGCCCAAGATTCTGCGATGGTGCTCGATTTGGACTTGGTGCAGAGGTTGGGATAAGCACAAGTCGAATTCACGCTCGGGGTCCGGTAGGAGTAGAAGGATTGTTAACAACTCGATGGATTCTGCGAGGAAATGGACAGATTGTGGACGGTGATAAGGAGATTACTTACACACACAAGGGCCTCCCAATTGAGCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004350 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006082 GO:0006520 GO:0006560 GO:0006561 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009555 GO:0009628 GO:0009651 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0016020 GO:0016053 GO:0016491 GO:0016620 GO:0016903 GO:0017084 GO:0018130 GO:0019752 GO:0022414 GO:0022622 GO:0030054 GO:0032501 GO:0032502 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0048229 GO:0048316 GO:0048364 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055044 GO:0055114 GO:0061458 GO:0071704 GO:0099402 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 ko01110 ko01230 map00330 map01100 map01110 map01230

Pfam Domains

Protein Families

AA_kinase Aldedh

Protein Analysis

718

Amino Acids

77.78

Weight (kDa)

6.34

Isoelectric Point (pI)

32.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	15 - 260	2.1e-40	Amino acid kinase family
Aldedh	PF00171	294 - 557	5.3e-07	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39800 AT2G39800 AT2G39800 AT2G39800 AT3G55610 AT3G55610
fragaria_vesca	FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_7g23420 FvH4_7g23420 FvH4_7g23420 FvH4_7g23430
malus_domestica	MD00G1141100.v1.1 MD01G1140200.v1.1 MD04G1136200.v1.1 MD07G1204500.v1.1 MD12G1150700.v1.1
prunus_persica	Prupe.2G240800_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1
pyrus_communis	pycom01g16070 pycom04g12400 pycom07g19110 pycom12g14450
rosa_chinensis	RchiOBHm_Chr1g0368541 RchiOBHm_Chr1g0368561 RchiOBHm_Chr3g0465091
rosa_laevigata	RLG00000024656 RLG00000027203 RLG00000027204
rosa_multiflora	Rmu_co8458369.1_g000001 Rmu_co8474891.1_g000001 Rmu_sc0003386.1_g000013 Rmu_sc0011394.1_g000007
rosa_roxburghii	Rroxscaffold_4G00288440 Rroxscaffold_4G00288450 Rroxscaffold_6G00415250
rosa_rugosa	Rorug01G0342800 Rorug01G0342900 Rorug03G0075300 Rorug03G0075400
rosa_samantha	Rh1AG350100 Rh1AG350200 Rh1BG313300 Rh1BG313400 Rh1CG328000 Rh1CG328100 Rh1DG344700 Rh1DG344800 Rh3BG139000 Rh3CG141100 Rh3CG149400 Rh3DG140200
rosa_wichuraiana	Rw3G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	303
Acc65I	GGTACC	1 cut(s)	830
AccB1I	GGYRCC	2 cut(s)	830, 862
AccBSI	CCGCTC	1 cut(s)	1046
AccI	GTMKAC	1 cut(s)	1929
AciI	CCGC	2 cut(s)	205, 1046
AclI	AACGTT	2 cut(s)	628, 1008
AclWI	GGATC	3 cut(s)	21, 1136, 1456
AcsI	RAATTY	3 cut(s)	957, 1501, 2022
AcuI	CTGAAG	5 cut(s)	155, 461, 911, 924, 1269
AdeI	CACNNNGTG	2 cut(s)	125, 1217
AfaI	GTAC	6 cut(s)	481, 832, 1119, 1260, 1672, 1790
AfeI	AGCGCT	1 cut(s)	1254
AfiI	CCNNNNNNNGG	2 cut(s)	1523, 1755
AflII	CTTAAG	1 cut(s)	1433
AflIII	ACRYGT	1 cut(s)	1120
AjiI	CACGTC	1 cut(s)	1447
AjnI	CCWGG	2 cut(s)	905, 1087
AjuI	GAANNNNNNNTTGG	4 cut(s)	666, 698, 1131, 1163
AleI	CACNNNNGTG	1 cut(s)	1863
Alw21I	GWGCWC	3 cut(s)	493, 1870, 1981
Alw26I	GTCTC	3 cut(s)	681, 1245, 1634
Alw44I	GTGCAC	1 cut(s)	1866
AlwI	GGATC	3 cut(s)	21, 1136, 1456
Ama87I	CYCGRG	3 cut(s)	21, 1754, 2031
Aor51HI	AGCGCT	1 cut(s)	1254
AoxI	GGCC	4 cut(s)	190, 611, 930, 2134
ApaLI	GTGCAC	1 cut(s)	1866
ApoI	RAATTY	3 cut(s)	957, 1501, 2022
Asp700I	GAANNNNTTC	1 cut(s)	1419
Asp718I	GGTACC	1 cut(s)	830
AspLEI	GCGC	4 cut(s)	48, 119, 1255, 1771
AspS9I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
AsuHPI	GGTGA	4 cut(s)	425, 766, 1348, 2117
AvaI	CYCGRG	3 cut(s)	21, 1754, 2031
AvaII	GGWCC	2 cut(s)	1733, 2036
BaeGI	GKGCMC	2 cut(s)	865, 1870
BanI	GGYRCC	2 cut(s)	830, 862
BanII	GRGCYC	2 cut(s)	493, 2151
BarI	GAAGNNNNNNTAC	4 cut(s)	1242, 1274, 1855, 1887
BbsI	GAAGAC	2 cut(s)	1393, 1899
Bbv12I	GWGCWC	3 cut(s)	493, 1870, 1981
BceAI	ACGGC	2 cut(s)	56, 938
BcgI	CGANNNNNNTGC	4 cut(s)	1814, 1848, 1919, 1953
BciT130I	CCWGG	2 cut(s)	907, 1089
BclI	TGATCA	1 cut(s)	1002
BcoDI	GTCTC	3 cut(s)	681, 1245, 1634
BfaI	CTAG	2 cut(s)	696, 1256
BfoI	RGCGCY	2 cut(s)	49, 1256
BfrI	CTTAAG	1 cut(s)	1433
Bme1390I	CCNGG	2 cut(s)	907, 1089
Bme18I	GGWCC	2 cut(s)	1733, 2036
BmeT110I	CYCGRG	3 cut(s)	21, 1754, 2031
BmgBI	CACGTC	1 cut(s)	1447
BmgT120I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
BmiI	GGNNCC	3 cut(s)	832, 864, 2037
BmrFI	CCNGG	2 cut(s)	907, 1089
BmrI	ACTGGG	1 cut(s)	1223
BmsI	GCATC	8 cut(s)	673, 768, 838, 871, 967, 1591, 1890, 1900
BmuI	ACTGGG	1 cut(s)	1223
BpiI	GAAGAC	2 cut(s)	1393, 1899
BplI	GAGNNNNNCTC	4 cut(s)	15, 47, 131, 163
BpmI	CTGGAG	1 cut(s)	233
BpuEI	CTTGAG	2 cut(s)	135, 1476
BsaAI	YACGTR	1 cut(s)	1121
BsaJI	CCNNGG	4 cut(s)	193, 906, 1088, 1736
BsaWI	WCCGGW	2 cut(s)	216, 2038
Bsc4I	CCNNNNNNNGG	2 cut(s)	1523, 1755
Bse1I	ACTGG	6 cut(s)	552, 777, 866, 1218, 1488, 1517
Bse3DI	GCAATG	3 cut(s)	1641, 1707, 1884
BseBI	CCWGG	2 cut(s)	907, 1089
BseDI	CCNNGG	4 cut(s)	193, 906, 1088, 1736
BseGI	GGATG	8 cut(s)	349, 601, 759, 897, 973, 1365, 1606, 1915
BseLI	CCNNNNNNNGG	2 cut(s)	1523, 1755
BseMI	GCAATG	3 cut(s)	1641, 1707, 1884
BseMII	CTCAG	1 cut(s)	223
BseNI	ACTGG	6 cut(s)	552, 777, 866, 1218, 1488, 1517
BseSI	GKGCMC	2 cut(s)	865, 1870
BsgI	GTGCAG	2 cut(s)	306, 2016
BshFI	GGCC	4 cut(s)	192, 613, 932, 2136
BshNI	GGYRCC	2 cut(s)	830, 862
BsiHKAI	GWGCWC	3 cut(s)	493, 1870, 1981
BsiHKCI	CYCGRG	3 cut(s)	21, 1754, 2031
BsiSI	CCGG	2 cut(s)	217, 2039
BslFI	GGGAC	1 cut(s)	79
BslI	CCNNNNNNNGG	2 cut(s)	1523, 1755
BsmAI	GTCTC	3 cut(s)	681, 1245, 1634
BsmFI	GGGAC	1 cut(s)	79
BsmI	GAATGC	1 cut(s)	1771
BsnI	GGCC	4 cut(s)	192, 613, 932, 2136
BsoBI	CYCGRG	3 cut(s)	21, 1754, 2031
Bsp1286I	GDGCHC	5 cut(s)	493, 865, 1870, 1981, 2151
Bsp143I	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
BspACI	CCGC	2 cut(s)	205, 1046
BspANI	GGCC	4 cut(s)	192, 613, 932, 2136
BspCNI	CTCAG	1 cut(s)	222
BspHI	TCATGA	1 cut(s)	1783
BspLI	GGNNCC	3 cut(s)	832, 864, 2037
BspPI	GGATC	3 cut(s)	21, 1136, 1456
BspT107I	GGYRCC	2 cut(s)	830, 862
BspTI	CTTAAG	1 cut(s)	1433
BsrBI	CCGCTC	1 cut(s)	1046
BsrDI	GCAATG	3 cut(s)	1641, 1707, 1884
BsrI	ACTGG	6 cut(s)	552, 777, 866, 1218, 1488, 1517
BssECI	CCNNGG	4 cut(s)	193, 906, 1088, 1736
BssMI	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
BssT1I	CCWWGG	1 cut(s)	1736
Bst2UI	CCWGG	2 cut(s)	907, 1089
Bst4CI	ACNGT	6 cut(s)	305, 533, 1793, 1810, 1934, 2105
Bst6I	CTCTTC	3 cut(s)	700, 1410, 1661
BstAFI	CTTAAG	1 cut(s)	1433
BstAPI	GCANNNNNTGC	1 cut(s)	752
BstBAI	YACGTR	1 cut(s)	1121
BstC8I	GCNNGC	7 cut(s)	757, 1077, 1128, 1176, 1804, 1833, 1957
BstDEI	CTNAG	2 cut(s)	209, 1323
BstF5I	GGATG	8 cut(s)	349, 601, 759, 897, 973, 1365, 1606, 1915
BstH2I	RGCGCY	2 cut(s)	49, 1256
BstHHI	GCGC	4 cut(s)	48, 119, 1255, 1771
BstKTI	GATC	9 cut(s)	16, 247, 571, 1005, 1144, 1331, 1456, 1464, 1690
BstMAI	GTCTC	3 cut(s)	681, 1245, 1634
BstMBI	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
BstMWI	GCNNNNNNNGC	9 cut(s)	287, 548, 743, 752, 902, 1043, 1076, 1274, 1631
BstNI	CCWGG	2 cut(s)	907, 1089
BstNSI	RCATGY	1 cut(s)	1835
BstSCI	CCNGG	2 cut(s)	905, 1087
BstSLI	GKGCMC	2 cut(s)	865, 1870
BstV2I	GAAGAC	2 cut(s)	1393, 1899
BstX2I	RGATCY	1 cut(s)	1141
BstYI	RGATCY	1 cut(s)	1141
BsuRI	GGCC	4 cut(s)	192, 613, 932, 2136
BtgZI	GCGATG	1 cut(s)	1986
BtrI	CACGTC	1 cut(s)	1447
BtsCI	GGATG	8 cut(s)	349, 601, 759, 897, 973, 1365, 1606, 1915
BtsIMutI	CAGTG	4 cut(s)	784, 1211, 1806, 1939
Cac8I	GCNNGC	7 cut(s)	757, 1077, 1128, 1176, 1804, 1833, 1957
CciI	TCATGA	1 cut(s)	1783
CfoI	GCGC	4 cut(s)	48, 119, 1255, 1771
Cfr13I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
CseI	GACGC	1 cut(s)	479
Csp6I	GTAC	6 cut(s)	480, 831, 1118, 1259, 1671, 1789
CviAII	CATG	8 cut(s)	934, 1135, 1439, 1529, 1547, 1784, 1832, 1853
CviQI	GTAC	6 cut(s)	480, 831, 1118, 1259, 1671, 1789
DdeI	CTNAG	2 cut(s)	209, 1323
DpnI	GATC	9 cut(s)	15, 246, 570, 1004, 1143, 1330, 1455, 1463, 1689
DpnII	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
DraIII	CACNNNGTG	2 cut(s)	125, 1217
DrdI	GACNNNNNNGTC	1 cut(s)	303
DseDI	GACNNNNNNGTC	1 cut(s)	303
Eam1104I	CTCTTC	3 cut(s)	700, 1410, 1661
EarI	CTCTTC	3 cut(s)	700, 1410, 1661
Ecl136II	GAGCTC	1 cut(s)	491
Eco130I	CCWWGG	1 cut(s)	1736
Eco24I	GRGCYC	2 cut(s)	493, 2151
Eco47I	GGWCC	2 cut(s)	1733, 2036
Eco47III	AGCGCT	1 cut(s)	1254
Eco53kI	GAGCTC	1 cut(s)	491
Eco57I	CTGAAG	5 cut(s)	155, 461, 911, 924, 1269
Eco88I	CYCGRG	3 cut(s)	21, 1754, 2031
EcoICRI	GAGCTC	1 cut(s)	491
EcoO109I	RGGNCCY	1 cut(s)	2134
EcoRI	GAATTC	2 cut(s)	1501, 2022
EcoRII	CCWGG	2 cut(s)	905, 1087
EcoT14I	CCWWGG	1 cut(s)	1736
EcoT38I	GRGCYC	2 cut(s)	493, 2151
ErhI	CCWWGG	1 cut(s)	1736
FaeI	CATG	8 cut(s)	937, 1138, 1442, 1532, 1550, 1787, 1835, 1856
FalI	AAGNNNNNCTT	2 cut(s)	252, 284
FaqI	GGGAC	1 cut(s)	79
FatI	CATG	8 cut(s)	933, 1134, 1438, 1528, 1546, 1783, 1831, 1852
FauI	CCCGC	1 cut(s)	1039
FbaI	TGATCA	1 cut(s)	1002
FblI	GTMKAC	1 cut(s)	1929
FokI	GGATG	8 cut(s)	356, 608, 746, 904, 980, 1352, 1613, 1922
FriOI	GRGCYC	2 cut(s)	493, 2151
FspBI	CTAG	2 cut(s)	696, 1256
GlaI	GCGC	4 cut(s)	47, 118, 1254, 1770
GsuI	CTGGAG	1 cut(s)	233
HaeII	RGCGCY	2 cut(s)	49, 1256
HaeIII	GGCC	4 cut(s)	192, 613, 932, 2136
HapII	CCGG	2 cut(s)	217, 2039
HgaI	GACGC	1 cut(s)	479
HhaI	GCGC	4 cut(s)	48, 119, 1255, 1771
Hin1II	CATG	8 cut(s)	937, 1138, 1442, 1532, 1550, 1787, 1835, 1856
Hin6I	GCGC	4 cut(s)	46, 117, 1253, 1769
HinP1I	GCGC	4 cut(s)	46, 117, 1253, 1769
HincII	GTYRAC	4 cut(s)	229, 1822, 1930, 2061
HindII	GTYRAC	4 cut(s)	229, 1822, 1930, 2061
HindIII	AAGCTT	1 cut(s)	635
HinfI	GANTC	8 cut(s)	79, 503, 1238, 1420, 1513, 1759, 1965, 2074
HpaI	GTTAAC	2 cut(s)	229, 2061
HpaII	CCGG	2 cut(s)	217, 2039
HphI	GGTGA	4 cut(s)	425, 766, 1348, 2117
Hpy166II	GTNNAC	7 cut(s)	229, 1733, 1822, 1868, 1930, 2061, 2101
Hpy188I	TCNGA	9 cut(s)	212, 309, 401, 441, 669, 943, 1033, 1227, 1283
Hpy8I	GTNNAC	7 cut(s)	229, 1733, 1822, 1868, 1930, 2061, 2101
Hpy99I	CGWCG	2 cut(s)	92, 473
HpyAV	CCTTC	6 cut(s)	130, 271, 396, 436, 1300, 2045
HpyCH4III	ACNGT	6 cut(s)	305, 533, 1793, 1810, 1934, 2105
HpyCH4IV	ACGT	6 cut(s)	39, 628, 823, 1008, 1120, 1446
HpyF10VI	GCNNNNNNNGC	9 cut(s)	287, 548, 743, 752, 902, 1043, 1076, 1274, 1631
HpyF3I	CTNAG	2 cut(s)	209, 1323
HpySE526I	ACGT	6 cut(s)	39, 628, 823, 1008, 1120, 1446
Hsp92II	CATG	8 cut(s)	937, 1138, 1442, 1532, 1550, 1787, 1835, 1856
HspAI	GCGC	4 cut(s)	46, 117, 1253, 1769
KpnI	GGTACC	1 cut(s)	834
Ksp22I	TGATCA	1 cut(s)	1002
KspAI	GTTAAC	2 cut(s)	229, 2061
Kzo9I	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
LmnI	GCTCC	2 cut(s)	496, 556
LweI	GCATC	8 cut(s)	673, 768, 838, 871, 967, 1591, 1890, 1900
MaeI	CTAG	2 cut(s)	696, 1256
MaeII	ACGT	6 cut(s)	39, 628, 823, 1008, 1120, 1446
MaeIII	GTNAC	5 cut(s)	76, 367, 620, 1402, 1717
MalI	GATC	9 cut(s)	15, 246, 570, 1004, 1143, 1330, 1455, 1463, 1689
MbiI	CCGCTC	1 cut(s)	1046
MboI	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
MfeI	CAATTG	3 cut(s)	1146, 1839, 2142
MflI	RGATCY	1 cut(s)	1141
MhlI	GDGCHC	5 cut(s)	493, 865, 1870, 1981, 2151
MlyI	GAGTC	2 cut(s)	73, 1247
MmeI	TCCRAC	2 cut(s)	274, 321
MroXI	GAANNNNTTC	1 cut(s)	1419
MseI	TTAA	7 cut(s)	42, 228, 459, 870, 1434, 1683, 2060
MslI	CAYNNNNRTG	5 cut(s)	846, 856, 1533, 1851, 1863
MspA1I	CMGCKG	3 cut(s)	133, 205, 290
MspCI	CTTAAG	1 cut(s)	1433
MspI	CCGG	2 cut(s)	217, 2039
MspR9I	CCNGG	2 cut(s)	907, 1089
MunI	CAATTG	3 cut(s)	1146, 1839, 2142
Mva1269I	GAATGC	1 cut(s)	1771
MvaI	CCWGG	2 cut(s)	907, 1089
MwoI	GCNNNNNNNGC	9 cut(s)	287, 548, 743, 752, 902, 1043, 1076, 1274, 1631
NdeII	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
NlaIII	CATG	8 cut(s)	937, 1138, 1442, 1532, 1550, 1787, 1835, 1856
NlaIV	GGNNCC	3 cut(s)	832, 864, 2037
NmeAIII	GCCGAG	2 cut(s)	174, 1051
NmuCI	GTSAC	3 cut(s)	76, 620, 1402
NspI	RCATGY	1 cut(s)	1835
OliI	CACNNNNGTG	1 cut(s)	1863
PaeI	GCATGC	1 cut(s)	1835
PaeR7I	CTCGAG	1 cut(s)	21
PagI	TCATGA	1 cut(s)	1783
PcsI	WCGNNNNNNNCGW	2 cut(s)	69, 1530
PctI	GAATGC	1 cut(s)	1771
PdmI	GAANNNNTTC	1 cut(s)	1419
PfeI	GAWTC	6 cut(s)	503, 1420, 1513, 1759, 1965, 2074
PflFI	GACNNNGTC	1 cut(s)	473
PleI	GAGTC	2 cut(s)	73, 1246
PpsI	GAGTC	2 cut(s)	73, 1246
Ppu21I	YACGTR	1 cut(s)	1121
Psp124BI	GAGCTC	1 cut(s)	493
Psp1406I	AACGTT	2 cut(s)	628, 1008
Psp6I	CCWGG	2 cut(s)	905, 1087
PspGI	CCWGG	2 cut(s)	905, 1087
PspN4I	GGNNCC	3 cut(s)	832, 864, 2037
PspPI	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
PsuI	RGATCY	1 cut(s)	1141
PsyI	GACNNNGTC	1 cut(s)	473
PvuII	CAGCTG	2 cut(s)	133, 290
RsaI	GTAC	6 cut(s)	481, 832, 1119, 1260, 1672, 1790
RsaNI	GTAC	6 cut(s)	480, 831, 1118, 1259, 1671, 1789
RseI	CAYNNNNRTG	5 cut(s)	846, 856, 1533, 1851, 1863
SacI	GAGCTC	1 cut(s)	493
SalI	GTCGAC	1 cut(s)	1928
SaqAI	TTAA	7 cut(s)	42, 228, 459, 870, 1434, 1683, 2060
Sau3AI	GATC	9 cut(s)	13, 244, 568, 1002, 1141, 1328, 1453, 1461, 1687
Sau96I	GGNCC	5 cut(s)	190, 611, 1733, 2036, 2134
SchI	GAGTC	2 cut(s)	73, 1247
ScrFI	CCNGG	2 cut(s)	907, 1089
SduI	GDGCHC	5 cut(s)	493, 865, 1870, 1981, 2151
SfaNI	GCATC	8 cut(s)	673, 768, 838, 871, 967, 1591, 1890, 1900
Sfr274I	CTCGAG	1 cut(s)	21
SinI	GGWCC	2 cut(s)	1733, 2036
SlaI	CTCGAG	1 cut(s)	21
SmiMI	CAYNNNNRTG	5 cut(s)	846, 856, 1533, 1851, 1863
SmlI	CTYRAG	4 cut(s)	21, 150, 1433, 1491
SmoI	CTYRAG	4 cut(s)	21, 150, 1433, 1491
SphI	GCATGC	1 cut(s)	1835
SsiI	CCGC	2 cut(s)	205, 1046
SspMI	CTAG	2 cut(s)	696, 1256
SstI	GAGCTC	1 cut(s)	493
StyD4I	CCNGG	2 cut(s)	905, 1087
StyI	CCWWGG	1 cut(s)	1736
TaaI	ACNGT	6 cut(s)	305, 533, 1793, 1810, 1934, 2105
TaiI	ACGT	6 cut(s)	42, 631, 826, 1011, 1123, 1449
TaqI	TCGA	7 cut(s)	22, 82, 1505, 1929, 1981, 2020, 2068
TaqII	GACCGA	1 cut(s)	1514
TatI	WGTACW	4 cut(s)	479, 1258, 1670, 1788
TauI	GCSGC	1 cut(s)	208
TfiI	GAWTC	6 cut(s)	503, 1420, 1513, 1759, 1965, 2074
Tru1I	TTAA	7 cut(s)	42, 228, 459, 870, 1434, 1683, 2060
Tru9I	TTAA	7 cut(s)	42, 228, 459, 870, 1434, 1683, 2060
TscAI	CASTG	4 cut(s)	784, 1218, 1813, 1939
TseFI	GTSAC	3 cut(s)	76, 620, 1402
Tsp45I	GTSAC	3 cut(s)	76, 620, 1402
TspDTI	ATGAA	9 cut(s)	437, 477, 830, 1008, 1032, 1068, 1260, 1764, 1869
TspGWI	ACGGA	2 cut(s)	105, 1875
TspRI	CASTG	4 cut(s)	784, 1218, 1813, 1939
Tth111I	GACNNNGTC	1 cut(s)	473
Vha464I	CTTAAG	1 cut(s)	1433
VneI	GTGCAC	1 cut(s)	1866
VpaK11BI	GGWCC	2 cut(s)	1733, 2036
XapI	RAATTY	3 cut(s)	957, 1501, 2022
XbaI	TCTAGA	1 cut(s)	695
XceI	RCATGY	1 cut(s)	1835
XhoI	CTCGAG	1 cut(s)	21
XmiI	GTMKAC	1 cut(s)	1929
XmnI	GAANNNNTTC	1 cut(s)	1419
XspI	CTAG	2 cut(s)	696, 1256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.