Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0000993

Physical Location & Seq

Genomic Coordinates Reverse (-)

15765488 .. 15771200

Gene Structure 5713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g16070.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGAGGAAGTGGATAGCTCTCGAGGTTTCCTCAAAGACGTTAAGCGCCTCGTTCTCAAGGTTGGGACTGCTGTTGTGACTCGAAACGACGGAAGAATAGCTCTTGGAAGATTAGGCGCGCTTTGTGAGCAGCTTAAGGAGTTGAACTCTCAAGGATATGAGATTATACTGGTGTCATCTGGTGCTGTGGGCCTCGGCCGTCAGCGGCTCAGATACCGGAAATTAGTTAACAGCAGGTATGTTTTCTTATTGAAACCACAAGTTGAACTTGATGGGAAGGCGTGTGCAGCTGTTGGACAGAACTGTCTGATGGCTCTCTACGATACGTTGTTTAGTCAGTTGGACGTGTCGTCAGCTCAGCTTCTTGTAACAGATAACGATTTTAGGGATAGAGATTTTAGAAAGCAACTAGGTGAAACTATGAAATCGTTGTTATCTCTGAAGGTTGTTCCTATATTTAATGAAAACGACGCAGTCAGTACGAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGATAATGACAGTTTGGCAGCTCTGCTGGCTTTGGAGCTAAAGGCTGATCTTCTTATTCTTTTGAGTGACGTTGATGGTCTATACAGCGGGCCTCCAAGTGACCCCCGTTCGAAGCTTATCCATACATACGTAAAGGAGAAGCATCAGACTGAAATTACTTTCGGAGACAAATCTAGAGTGGGAAGAGGGGGTATGACTGCTAAAGTAAAAGCTGCTGTTAATGCAGCTTATGCTGGCATCCCTGTTGTTATCACAAGTGGGTTTGCTGCTGGAAACATCTCTAAAGTCCTTCAAGGGCAACGTATTGGTACCCTCTTTCACCAAGATGCTCATTTATGGGCACCAGTTAAAGAAATTGATGCAAGAGGGATGGCAGTTGCAGCCAGGGAGAGTTCCAGAAGGCTTCAGGCCATGACTTCAGAAGACAGGAAAAAAATTCTTCTGGATGTAGCTGATGCCCTTGAAGCAAATGTAAAATTGATCAACATTGAAAATGAAGCTGATGTTTCTGAGGCACAACAAGCAGGATATGAAAAATCATTGATATCTCGGCTGGCTCTGAAGCCTGGGAAGATTACAAGCCTTGCAAAGTCTATTCGTGTGCTTGCAAACATGGAAGATCTAAAGAGAACGAGAGTGAAACAATTGGTCCTTGCAGATGGTCTTGTCTTGGAGAAAACATCAAGCCCATTGGGTGTTCTCCTGATTGTATTTGAGTCTCGTCCTGAAGCGCTAGTACAGATAGCTTCGTTAGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAGGGGGGAAAGGAGGCTAAGAGATCAAATGCAATTTTGCACAAGATTATCACCGAAGCCATCCCAGAGAGTGTTGGTGGAAAACTAATTGGACTTGTGACTTCAAGAGAAGAGATTCCGGACTTGCTTAAGCATGATGACGTGATTGATCGATCAACGATTGTGATCCCAAGAGGCAGCAATAAACTGGTTTCTCAAGTCAAGAATTCGACCAAGATTCCAGTTCTCGGTCATGCTGATGGAATATGCCATGTGTATATTGATAAGTCTGCTAATATGGATATGGCAAAGAGAATTGTTTTGGATGCAAAAGTGGATTATCCAGCAGCGTGTAATGCAATGGAAACACTTCTGGTCCATAATGATTTGAAAAGTACAGCCGCATTTAATGATCTTGTTGTTGAGCTTCGCACTGCAGGTGTTACTTTATATGGCGGACCAAGGGCAAGCGTCTTGCTCAGGATTCCTGAGGCACATTCGTTCCACCATGAGTACAGTTCAATGGCTTGCACTGTTGAGTTTGTTGACGATGTGCATGCAGCAATTGATCATATACATGAACATGGAAGTGCACACACTGATTGCATCATTGCAGAAGACCAAGAAGTTGTGGATGCGTTTTTAGGTAAAGTTGACAGTGCTGCTGTTTTCCACAATGCAAGCCCAAGATTCTGCGATGGGGCTCGATTTGGACTTGGTGCAGAGGTCGGGATAAGCACAAGTCGAATTCATGCTCGGGGTCCGGTAGGAGTTGAAGGACTGTTAACAACTCGGTGGATTCTGAGAGGAAATGGACAAATTGTGGACGGTGATAAGGGGGTTACTTACACCCACAAGGACCTCCCAATTGAGCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004350 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006082 GO:0006520 GO:0006560 GO:0006561 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009555 GO:0009628 GO:0009651 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0016020 GO:0016053 GO:0016491 GO:0016620 GO:0016903 GO:0017084 GO:0018130 GO:0019752 GO:0022414 GO:0022622 GO:0030054 GO:0032501 GO:0032502 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0048229 GO:0048316 GO:0048364 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055044 GO:0055114 GO:0061458 GO:0071704 GO:0099402 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 ko01110 ko01230 map00330 map01100 map01110 map01230

Pfam Domains

Protein Families

AA_kinase Aldedh

Protein Analysis

721

Amino Acids

78.18

Weight (kDa)

7.32

Isoelectric Point (pI)

33.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39800 AT2G39800 AT2G39800 AT2G39800 AT3G55610 AT3G55610
fragaria_vesca	FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_7g23420 FvH4_7g23420 FvH4_7g23420 FvH4_7g23430
malus_domestica	MD00G1141100.v1.1 MD01G1140200.v1.1 MD04G1136200.v1.1 MD07G1204500.v1.1 MD12G1150700.v1.1
prunus_persica	Prupe.2G240800_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1
pyrus_communis	pycom01g16070 pycom04g12400 pycom07g19110 pycom12g14450
rosa_chinensis	RchiOBHm_Chr1g0368541 RchiOBHm_Chr1g0368561 RchiOBHm_Chr3g0465091
rosa_laevigata	RLG00000024656 RLG00000027203 RLG00000027204
rosa_multiflora	Rmu_co8458369.1_g000001 Rmu_co8474891.1_g000001 Rmu_sc0003386.1_g000013 Rmu_sc0011394.1_g000007
rosa_roxburghii	Rroxscaffold_4G00288440 Rroxscaffold_4G00288450 Rroxscaffold_6G00415250
rosa_rugosa	Rorug01G0342800 Rorug01G0342900 Rorug03G0075300 Rorug03G0075400
rosa_samantha	Rh1AG350100 Rh1AG350200 Rh1BG313300 Rh1BG313400 Rh1CG328000 Rh1CG328100 Rh1DG344700 Rh1DG344800 Rh3BG139000 Rh3CG141100 Rh3CG149400 Rh3DG140200
rosa_wichuraiana	Rw3G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1712
AasI	GACNNNNNNGTC	1 cut(s)	303
Acc36I	ACCTGC	2 cut(s)	225, 1712
Acc65I	GGTACC	1 cut(s)	830
AccB1I	GGYRCC	2 cut(s)	830, 862
AccII	CGCG	1 cut(s)	119
AccIII	TCCGGA	1 cut(s)	1423
AciI	CCGC	4 cut(s)	205, 609, 1686, 1740
AclWI	GGATC	1 cut(s)	1465
AcoI	YGGCCR	1 cut(s)	196
AcsI	RAATTY	3 cut(s)	957, 1510, 2031
AcuI	CTGAAG	5 cut(s)	461, 911, 924, 1103, 1269
AfaI	GTAC	5 cut(s)	481, 832, 1260, 1681, 1799
AfeI	AGCGCT	1 cut(s)	1254
AfiI	CCNNNNNNNGG	1 cut(s)	1532
AflII	CTTAAG	2 cut(s)	134, 1433
AflIII	ACRYGT	1 cut(s)	345
AhdI	GACNNNNNGTC	1 cut(s)	349
AjiI	CACGTC	2 cut(s)	346, 1447
AjnI	CCWGG	2 cut(s)	905, 1087
Alw21I	GWGCWC	1 cut(s)	1879
Alw26I	GTCTC	2 cut(s)	681, 1245
Alw44I	GTGCAC	1 cut(s)	1875
AlwI	GGATC	1 cut(s)	1465
Ama87I	CYCGRG	2 cut(s)	21, 2040
Aor13HI	TCCGGA	1 cut(s)	1423
Aor51HI	AGCGCT	1 cut(s)	1254
AoxI	GGCC	4 cut(s)	190, 196, 611, 930
ApaLI	GTGCAC	1 cut(s)	1875
ApoI	RAATTY	3 cut(s)	957, 1510, 2031
Asp700I	GAANNNNTTC	2 cut(s)	1419, 1653
Asp718I	GGTACC	1 cut(s)	830
AspLEI	GCGC	4 cut(s)	48, 119, 121, 1255
AspS9I	GGNCC	7 cut(s)	190, 611, 1171, 1660, 1742, 2045, 2143
AsuHPI	GGTGA	4 cut(s)	425, 833, 1348, 2126
AsuII	TTCGAA	1 cut(s)	632
AvaI	CYCGRG	2 cut(s)	21, 2040
AvaII	GGWCC	5 cut(s)	1171, 1660, 1742, 2045, 2143
AxyI	CCTNAGG	1 cut(s)	1773
BaeGI	GKGCMC	2 cut(s)	865, 1879
BanI	GGYRCC	2 cut(s)	830, 862
BanII	GRGCYC	2 cut(s)	1990, 2160
BarI	GAAGNNNNNNTAC	2 cut(s)	1242, 1274
BbsI	GAAGAC	2 cut(s)	951, 1908
Bbv12I	GWGCWC	1 cut(s)	1879
BccI	CCATC	8 cut(s)	266, 304, 590, 886, 1175, 1373, 1538, 1976
BceAI	ACGGC	1 cut(s)	183
BcgI	CGANNNNNNTGC	2 cut(s)	1823, 1857
BciT130I	CCWGG	2 cut(s)	907, 1089
BclI	TGATCA	2 cut(s)	1002, 1852
BcoDI	GTCTC	2 cut(s)	681, 1245
BfaI	CTAG	3 cut(s)	410, 696, 1256
BfmI	CTRYAG	1 cut(s)	1719
BfoI	RGCGCY	2 cut(s)	49, 1256
BfrI	CTTAAG	2 cut(s)	134, 1433
BfuAI	ACCTGC	2 cut(s)	225, 1712
BglII	AGATCT	1 cut(s)	1141
BlpI	GCTNAGC	1 cut(s)	357
Bme1390I	CCNGG	2 cut(s)	907, 1089
Bme18I	GGWCC	5 cut(s)	1171, 1660, 1742, 2045, 2143
BmeRI	GACNNNNNGTC	1 cut(s)	349
BmeT110I	CYCGRG	2 cut(s)	21, 2040
BmgBI	CACGTC	2 cut(s)	346, 1447
BmgT120I	GGNCC	7 cut(s)	190, 611, 1171, 1660, 1742, 2045, 2143
BmiI	GGNNCC	3 cut(s)	832, 864, 2046
BmrFI	CCNGG	2 cut(s)	907, 1089
BmsI	GCATC	8 cut(s)	673, 768, 838, 871, 967, 1600, 1899, 1909
BpiI	GAAGAC	2 cut(s)	951, 1908
BplI	GAGNNNNNCTC	6 cut(s)	15, 47, 131, 163, 475, 507
Bpu10I	CCTNAGC	1 cut(s)	1763
Bpu1102I	GCTNAGC	1 cut(s)	357
Bpu14I	TTCGAA	1 cut(s)	632
BpuEI	CTTGAG	3 cut(s)	41, 135, 1485
Bsa29I	ATCGAT	1 cut(s)	1456
BsaAI	YACGTR	1 cut(s)	652
BsaBI	GATNNNNATC	1 cut(s)	1469
BsaJI	CCNNGG	4 cut(s)	193, 906, 1088, 1745
BsaWI	WCCGGW	3 cut(s)	216, 1423, 2047
Bsc4I	CCNNNNNNNGG	1 cut(s)	1532
Bse1I	ACTGG	4 cut(s)	174, 866, 1497, 1526
Bse21I	CCTNAGG	1 cut(s)	1773
Bse3DI	GCAATG	2 cut(s)	1650, 1893
Bse8I	GATNNNNATC	1 cut(s)	1469
BseAI	TCCGGA	1 cut(s)	1423
BseBI	CCWGG	2 cut(s)	907, 1089
BseCI	ATCGAT	1 cut(s)	1456
BseDI	CCNNGG	4 cut(s)	193, 906, 1088, 1745
BseGI	GGATG	6 cut(s)	759, 897, 973, 1365, 1615, 1924
BseJI	GATNNNNATC	1 cut(s)	1469
BseLI	CCNNNNNNNGG	1 cut(s)	1532
BseMI	GCAATG	2 cut(s)	1650, 1893
BseMII	CTCAG	6 cut(s)	223, 371, 1023, 1764, 1777, 2078
BseNI	ACTGG	4 cut(s)	174, 866, 1497, 1526
BsePI	GCGCGC	1 cut(s)	117
BseSI	GKGCMC	2 cut(s)	865, 1879
BseX3I	CGGCCG	1 cut(s)	196
BsgI	GTGCAG	2 cut(s)	306, 2025
Bsh1236I	CGCG	1 cut(s)	119
Bsh1285I	CGRYCG	1 cut(s)	199
BshFI	GGCC	4 cut(s)	192, 198, 613, 932
BshNI	GGYRCC	2 cut(s)	830, 862
BshVI	ATCGAT	1 cut(s)	1456
BsiEI	CGRYCG	1 cut(s)	199
BsiHKAI	GWGCWC	1 cut(s)	1879
BsiHKCI	CYCGRG	2 cut(s)	21, 2040
BsiSI	CCGG	3 cut(s)	217, 1424, 2048
BslFI	GGGAC	1 cut(s)	79
BslI	CCNNNNNNNGG	1 cut(s)	1532
BsmAI	GTCTC	2 cut(s)	681, 1245
BsmFI	GGGAC	1 cut(s)	79
BsnI	GGCC	4 cut(s)	192, 198, 613, 932
BsoBI	CYCGRG	2 cut(s)	21, 2040
Bsp119I	TTCGAA	1 cut(s)	632
Bsp1286I	GDGCHC	4 cut(s)	865, 1879, 1990, 2160
Bsp13I	TCCGGA	1 cut(s)	1423
Bsp143I	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
Bsp1720I	GCTNAGC	1 cut(s)	357
BspACI	CCGC	4 cut(s)	205, 609, 1686, 1740
BspANI	GGCC	4 cut(s)	192, 198, 613, 932
BspCNI	CTCAG	6 cut(s)	222, 370, 1024, 1765, 1776, 2079
BspDI	ATCGAT	1 cut(s)	1456
BspEI	TCCGGA	1 cut(s)	1423
BspFNI	CGCG	1 cut(s)	119
BspLI	GGNNCC	3 cut(s)	832, 864, 2046
BspMAI	CTGCAG	1 cut(s)	1723
BspMI	ACCTGC	2 cut(s)	225, 1712
BspPI	GGATC	1 cut(s)	1465
BspT104I	TTCGAA	1 cut(s)	632
BspT107I	GGYRCC	2 cut(s)	830, 862
BspTI	CTTAAG	2 cut(s)	134, 1433
BsrDI	GCAATG	2 cut(s)	1650, 1893
BsrI	ACTGG	4 cut(s)	174, 866, 1497, 1526
BssECI	CCNNGG	4 cut(s)	193, 906, 1088, 1745
BssHII	GCGCGC	1 cut(s)	117
BssMI	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
BssT1I	CCWWGG	1 cut(s)	1745
Bst2UI	CCWGG	2 cut(s)	907, 1089
Bst4CI	ACNGT	7 cut(s)	305, 533, 1802, 1819, 1943, 2067, 2114
Bst6I	CTCTTC	2 cut(s)	700, 1410
BstAFI	CTTAAG	2 cut(s)	134, 1433
BstAPI	GCANNNNNTGC	1 cut(s)	752
BstBAI	YACGTR	1 cut(s)	652
BstBI	TTCGAA	1 cut(s)	632
BstDEI	CTNAG	7 cut(s)	209, 357, 1032, 1323, 1763, 1773, 2087
BstF5I	GGATG	6 cut(s)	759, 897, 973, 1365, 1615, 1924
BstFNI	CGCG	1 cut(s)	119
BstH2I	RGCGCY	2 cut(s)	49, 1256
BstHHI	GCGC	4 cut(s)	48, 119, 121, 1255
BstKTI	GATC	9 cut(s)	571, 1005, 1144, 1331, 1456, 1460, 1473, 1699, 1855
BstMAI	GTCTC	2 cut(s)	681, 1245
BstMBI	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
BstMCI	CGRYCG	1 cut(s)	199
BstNI	CCWGG	2 cut(s)	907, 1089
BstNSI	RCATGY	1 cut(s)	1844
BstSCI	CCNGG	2 cut(s)	905, 1087
BstSFI	CTRYAG	1 cut(s)	1719
BstSLI	GKGCMC	2 cut(s)	865, 1879
BstSNI	TACGTA	1 cut(s)	652
BstUI	CGCG	1 cut(s)	119
BstV2I	GAAGAC	2 cut(s)	951, 1908
BstX2I	RGATCY	1 cut(s)	1141
BstYI	RGATCY	1 cut(s)	1141
BstZI	CGGCCG	1 cut(s)	196
Bsu15I	ATCGAT	1 cut(s)	1456
Bsu36I	CCTNAGG	1 cut(s)	1773
BsuRI	GGCC	4 cut(s)	192, 198, 613, 932
BsuTUI	ATCGAT	1 cut(s)	1456
BtgZI	GCGATG	1 cut(s)	1995
BtrI	CACGTC	2 cut(s)	346, 1447
BtsCI	GGATG	6 cut(s)	759, 897, 973, 1365, 1615, 1924
BtsI	GCAGTG	1 cut(s)	1716
BtsIMutI	CAGTG	4 cut(s)	1716, 1815, 1881, 1948
BveI	ACCTGC	2 cut(s)	225, 1712
CfoI	GCGC	4 cut(s)	48, 119, 121, 1255
Cfr13I	GGNCC	7 cut(s)	190, 611, 1171, 1660, 1742, 2045, 2143
ClaI	ATCGAT	1 cut(s)	1456
CseI	GACGC	2 cut(s)	479, 1744
Csp6I	GTAC	5 cut(s)	480, 831, 1259, 1680, 1798
CviQI	GTAC	5 cut(s)	480, 831, 1259, 1680, 1798
DdeI	CTNAG	7 cut(s)	209, 357, 1032, 1323, 1763, 1773, 2087
DpnI	GATC	9 cut(s)	570, 1004, 1143, 1330, 1455, 1459, 1472, 1698, 1854
DpnII	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
DrdI	GACNNNNNNGTC	1 cut(s)	303
DriI	GACNNNNNGTC	1 cut(s)	349
DseDI	GACNNNNNNGTC	1 cut(s)	303
EaeI	YGGCCR	1 cut(s)	196
EagI	CGGCCG	1 cut(s)	196
Eam1104I	CTCTTC	2 cut(s)	700, 1410
Eam1105I	GACNNNNNGTC	1 cut(s)	349
EarI	CTCTTC	2 cut(s)	700, 1410
EciI	GGCGGA	1 cut(s)	1755
EclXI	CGGCCG	1 cut(s)	196
Eco105I	TACGTA	1 cut(s)	652
Eco130I	CCWWGG	1 cut(s)	1745
Eco24I	GRGCYC	2 cut(s)	1990, 2160
Eco32I	GATATC	1 cut(s)	1068
Eco47I	GGWCC	5 cut(s)	1171, 1660, 1742, 2045, 2143
Eco47III	AGCGCT	1 cut(s)	1254
Eco52I	CGGCCG	1 cut(s)	196
Eco57I	CTGAAG	5 cut(s)	461, 911, 924, 1103, 1269
Eco81I	CCTNAGG	1 cut(s)	1773
Eco88I	CYCGRG	2 cut(s)	21, 2040
EcoO109I	RGGNCCY	1 cut(s)	2143
EcoRI	GAATTC	2 cut(s)	1510, 2031
EcoRII	CCWGG	2 cut(s)	905, 1087
EcoRV	GATATC	1 cut(s)	1068
EcoT14I	CCWWGG	1 cut(s)	1745
EcoT38I	GRGCYC	2 cut(s)	1990, 2160
ErhI	CCWWGG	1 cut(s)	1745
FalI	AAGNNNNNCTT	2 cut(s)	252, 284
FaqI	GGGAC	1 cut(s)	79
FauI	CCCGC	1 cut(s)	602
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	2 cut(s)	1002, 1852
FokI	GGATG	6 cut(s)	746, 904, 980, 1352, 1622, 1931
FriOI	GRGCYC	2 cut(s)	1990, 2160
FspBI	CTAG	3 cut(s)	410, 696, 1256
GlaI	GCGC	4 cut(s)	47, 118, 120, 1254
HaeII	RGCGCY	2 cut(s)	49, 1256
HaeIII	GGCC	4 cut(s)	192, 198, 613, 932
HapII	CCGG	3 cut(s)	217, 1424, 2048
HgaI	GACGC	2 cut(s)	479, 1744
HhaI	GCGC	4 cut(s)	48, 119, 121, 1255
Hin6I	GCGC	4 cut(s)	46, 117, 119, 1253
HinP1I	GCGC	4 cut(s)	46, 117, 119, 1253
HincII	GTYRAC	4 cut(s)	229, 1831, 1939, 2070
HindII	GTYRAC	4 cut(s)	229, 1831, 1939, 2070
HindIII	AAGCTT	1 cut(s)	635
HinfI	GANTC	8 cut(s)	79, 503, 1238, 1420, 1522, 1768, 1974, 2083
HpaI	GTTAAC	2 cut(s)	229, 2070
HpaII	CCGG	3 cut(s)	217, 1424, 2048
HphI	GGTGA	4 cut(s)	425, 833, 1348, 2126
Hpy166II	GTNNAC	6 cut(s)	229, 1831, 1877, 1939, 2070, 2110
Hpy8I	GTNNAC	6 cut(s)	229, 1831, 1877, 1939, 2070, 2110
Hpy99I	CGWCG	2 cut(s)	92, 473
HpyAV	CCTTC	6 cut(s)	271, 436, 821, 915, 1300, 2054
HpyCH4III	ACNGT	7 cut(s)	305, 533, 1802, 1819, 1943, 2067, 2114
HpyCH4IV	ACGT	7 cut(s)	39, 326, 345, 591, 651, 823, 1446
HpyF3I	CTNAG	7 cut(s)	209, 357, 1032, 1323, 1763, 1773, 2087
HpySE526I	ACGT	7 cut(s)	39, 326, 345, 591, 651, 823, 1446
HspAI	GCGC	4 cut(s)	46, 117, 119, 1253
Kpn2I	TCCGGA	1 cut(s)	1423
KpnI	GGTACC	1 cut(s)	834
Ksp22I	TGATCA	2 cut(s)	1002, 1852
KspAI	GTTAAC	2 cut(s)	229, 2070
Kzo9I	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
LmnI	GCTCC	2 cut(s)	496, 556
LweI	GCATC	8 cut(s)	673, 768, 838, 871, 967, 1600, 1899, 1909
MaeI	CTAG	3 cut(s)	410, 696, 1256
MaeII	ACGT	7 cut(s)	39, 326, 345, 591, 651, 823, 1446
MaeIII	GTNAC	7 cut(s)	76, 367, 587, 620, 1402, 1726, 2125
MalI	GATC	9 cut(s)	570, 1004, 1143, 1330, 1455, 1459, 1472, 1698, 1854
MboI	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
MfeI	CAATTG	3 cut(s)	1166, 1848, 2151
MflI	RGATCY	1 cut(s)	1141
MhlI	GDGCHC	4 cut(s)	865, 1879, 1990, 2160
MlyI	GAGTC	2 cut(s)	73, 1247
MmeI	TCCRAC	2 cut(s)	274, 321
MroI	TCCGGA	1 cut(s)	1423
MroXI	GAANNNNTTC	2 cut(s)	1419, 1653
MseI	TTAA	9 cut(s)	42, 135, 228, 459, 741, 870, 1434, 1692, 2069
MslI	CAYNNNNRTG	5 cut(s)	846, 1542, 1860, 1866, 1872
MspA1I	CMGCKG	3 cut(s)	205, 290, 609
MspCI	CTTAAG	2 cut(s)	134, 1433
MspI	CCGG	3 cut(s)	217, 1424, 2048
MspR9I	CCNGG	2 cut(s)	907, 1089
MunI	CAATTG	3 cut(s)	1166, 1848, 2151
MvaI	CCWGG	2 cut(s)	907, 1089
MvnI	CGCG	1 cut(s)	119
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
NlaIV	GGNNCC	3 cut(s)	832, 864, 2046
NmeAIII	GCCGAG	2 cut(s)	174, 1051
NmuCI	GTSAC	4 cut(s)	76, 587, 620, 1402
NspI	RCATGY	1 cut(s)	1844
NspV	TTCGAA	1 cut(s)	632
PaeI	GCATGC	1 cut(s)	1844
PaeR7I	CTCGAG	1 cut(s)	21
PaqCI	CACCTGC	1 cut(s)	1712
PauI	GCGCGC	1 cut(s)	117
PdmI	GAANNNNTTC	2 cut(s)	1419, 1653
PfeI	GAWTC	6 cut(s)	503, 1420, 1522, 1768, 1974, 2083
PflFI	GACNNNGTC	1 cut(s)	473
PleI	GAGTC	2 cut(s)	73, 1246
PpsI	GAGTC	2 cut(s)	73, 1246
Ppu21I	YACGTR	1 cut(s)	652
PpuMI	RGGWCCY	1 cut(s)	2143
Psp5II	RGGWCCY	1 cut(s)	2143
Psp6I	CCWGG	2 cut(s)	905, 1087
PspGI	CCWGG	2 cut(s)	905, 1087
PspN4I	GGNNCC	3 cut(s)	832, 864, 2046
PspPI	GGNCC	7 cut(s)	190, 611, 1171, 1660, 1742, 2045, 2143
PspPPI	RGGWCCY	1 cut(s)	2143
PstI	CTGCAG	1 cut(s)	1723
PsuI	RGATCY	1 cut(s)	1141
PsyI	GACNNNGTC	1 cut(s)	473
PteI	GCGCGC	1 cut(s)	117
PvuII	CAGCTG	1 cut(s)	290
RsaI	GTAC	5 cut(s)	481, 832, 1260, 1681, 1799
RsaNI	GTAC	5 cut(s)	480, 831, 1259, 1680, 1798
RseI	CAYNNNNRTG	5 cut(s)	846, 1542, 1860, 1866, 1872
SaqAI	TTAA	9 cut(s)	42, 135, 228, 459, 741, 870, 1434, 1692, 2069
Sau3AI	GATC	9 cut(s)	568, 1002, 1141, 1328, 1453, 1457, 1470, 1696, 1852
Sau96I	GGNCC	7 cut(s)	190, 611, 1171, 1660, 1742, 2045, 2143
SchI	GAGTC	2 cut(s)	73, 1247
ScrFI	CCNGG	2 cut(s)	907, 1089
SduI	GDGCHC	4 cut(s)	865, 1879, 1990, 2160
SfaNI	GCATC	8 cut(s)	673, 768, 838, 871, 967, 1600, 1899, 1909
SfcI	CTRYAG	1 cut(s)	1719
Sfr274I	CTCGAG	1 cut(s)	21
SfuI	TTCGAA	1 cut(s)	632
SinI	GGWCC	5 cut(s)	1171, 1660, 1742, 2045, 2143
SlaI	CTCGAG	1 cut(s)	21
SmiMI	CAYNNNNRTG	5 cut(s)	846, 1542, 1860, 1866, 1872
SmlI	CTYRAG	6 cut(s)	21, 56, 134, 150, 1433, 1500
SmoI	CTYRAG	6 cut(s)	21, 56, 134, 150, 1433, 1500
SnaBI	TACGTA	1 cut(s)	652
SphI	GCATGC	1 cut(s)	1844
SsiI	CCGC	4 cut(s)	205, 609, 1686, 1740
SspMI	CTAG	3 cut(s)	410, 696, 1256
StyD4I	CCNGG	2 cut(s)	905, 1087
StyI	CCWWGG	1 cut(s)	1745
TaaI	ACNGT	7 cut(s)	305, 533, 1802, 1819, 1943, 2067, 2114
TaiI	ACGT	7 cut(s)	42, 329, 348, 594, 654, 826, 1449
TaqI	TCGA	7 cut(s)	22, 82, 632, 1456, 1514, 1990, 2029
TaqII	GACCGA	1 cut(s)	1523
TatI	WGTACW	3 cut(s)	1258, 1679, 1797
TauI	GCSGC	2 cut(s)	208, 1688
TfiI	GAWTC	6 cut(s)	503, 1420, 1522, 1768, 1974, 2083
Tru1I	TTAA	9 cut(s)	42, 135, 228, 459, 741, 870, 1434, 1692, 2069
Tru9I	TTAA	9 cut(s)	42, 135, 228, 459, 741, 870, 1434, 1692, 2069
TscAI	CASTG	4 cut(s)	1723, 1822, 1888, 1948
TseFI	GTSAC	4 cut(s)	76, 587, 620, 1402
Tsp45I	GTSAC	4 cut(s)	76, 587, 620, 1402
TspDTI	ATGAA	6 cut(s)	437, 477, 1032, 1068, 1878, 2024
TspGWI	ACGGA	1 cut(s)	105
TspRI	CASTG	4 cut(s)	1723, 1822, 1888, 1948
Tth111I	GACNNNGTC	1 cut(s)	473
Vha464I	CTTAAG	2 cut(s)	134, 1433
VneI	GTGCAC	1 cut(s)	1875
VpaK11BI	GGWCC	5 cut(s)	1171, 1660, 1742, 2045, 2143
XapI	RAATTY	3 cut(s)	957, 1510, 2031
XbaI	TCTAGA	1 cut(s)	695
XceI	RCATGY	1 cut(s)	1844
XhoI	CTCGAG	1 cut(s)	21
XmnI	GAANNNNTTC	2 cut(s)	1419, 1653
XspI	CTAG	3 cut(s)	410, 696, 1256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.