Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0000993

Physical Location & Seq

Genomic Coordinates Reverse (-)

23064286 .. 23069942

Gene Structure 5657 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1150700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGACTCTGTGGATCCTACGAGAGCTTTTATCAAGAATGTCAAGCGTATCGTTGTTAAGGTCGGAACAGCTGTGGTCACTCGGGGTGATGGAAGATTAGCATTGGGCAGACTAGGTGCTCTCTGTGAGCAGCTTAAAGATATAAATTCCCAGGGGTATGAAGTTATTTTGGTGACTTCAGGAGCTGTTGGTCTTGGCCGGCAGAGGCTAAGATACCGGAGATTGGCAAATAGCAGCTTTGCTGATCTCCAAAATCCACAAAATGATTTTGATGGGAAGGCTTGTGCAGCTCTTGATGTGACTTCTTCGCAACTTCTTGTGACGGATAGCGTTTTTAGGGATGAAGCTTTCAGAAAGCAACTTTCTGAAACCGTGAAGTCGCTGTTAAAACTGAGGGTGATTCCAATCTTCAATGAAAATGACGCTGTTAGTACTAGGAAAGCTCCATACGAGGATTCTTCTGGCATATTTTGGGACAATGACAGTTTGGCCGGTCTATTGGCTCTGGAACTAAAAGCTGACCTTCTGGTTTTGTTAAGCGATGTAGAGGGCCTCTATAGCGGTCCTCCTACGGACCCAAAATCAAAGTTAATCCATACTTACGTGAAAGAGAAACATCAGGGAGAAATAACATTTGGCGATAAGTCAAGGGTGGGCAGAGGTGGTATGACTGCTAAAGTCAATGCTGCTGTGTGTGCAGCTTATGGTGGAATCCCTGTTGTTATCACTAGTGGCTATGACACAGACAACATAAAGAAAGTGCTTCGTGGAGACCGAATAGGCACTGTATTTCATCAAGATGCACATTTGTGGACTGTAGTTAAGGAAGAAGGTGCACGTGACATGGCCGTTGCAGCGCAGGAAGCATCTAGACAGTTCCGAGCTCTAGGATCTCAAGAGAGGAGGAAAATTTTGCTCGACGTAGCTGATGCCTTGGAGGCAAATGAAGGTGAAATTATAGCTGCGAATGAAGCTGATGTTGCTACTGCCCAGGAGGTTGGATATGAGAAGGCCCTAATATCGCGTTTAGCCCTAAAGCCTGGGAAGATTTCTGCTCTTGCAAAGTCTGTACGTAAACTGGCTGACATGGAAGAGCCCATTGGCCGTGTTCTAAAGAAGACCGAGCTTGCAGAAGGGCTTGTCTTGGAGAAACTGTCATGTCCTTTGGGTGTTCTCTTAGTTGTGTTTGAGTCTCGACCGGATGCCCTTGTTCAGATAGCTGCGTTAGCAATTCAAAGTCGGAATGGTCTTCTGCTTAAAGGTGGGAAAGAAGCCAAGCGATCAAATGCAATCTTGCACAAGGTCATCACCTCAGCAATCCCAGAACCTGTTGGTGGCAAACTTATCGGACTTGTGAATACACGAGACGAGATTCCTGACCTACTCAAGCTCGATGATGTGATCGATCTTGTCATCCCTAGAGGCAGCAATAAGCTTGTTTCTAAAATTAAGGAGTCAACTAAGATACCTGTTCTTGGTCATGCCGATGGGATTTGTCACGTTTATGTTGACAAGTCCGCTAATCTGGATATGGCAAAGCGAATTGTTCTGGATGCAAAAGTAGACTACCCTGCTGCCTGCAATGCGATGGAAACACTTCTTGTACACAAGGATCTGTTGAGCGATGGCGGGTTTAAGCAGATAATTTCAGAACTCAAAGATTCAGGTGTTAGCTTATATGGTGGACCTAGGGCAGCAACTGCGTTACACCTTCCAGAGACAGACTCATTCCATTACGAGTACAGTTCATTGGCTTGCTCAGTTGAAATTGTTGATGATGTGAACGCTGCAATTGACCACATTCATGAACATGGAAGTGCTCACACTGATTGCATCGTCACTGAAGATGGTCAAGTTGCTGAAGTTTTCCTAACTCAAGTCGACAGCGCTGCAGTCTTTCATAACGTGAGTACAAGGTTTTGTGATGGAGCGCGCTTTGGACTGGGTGCAGAAGTCGGGATAAGTACGAGCAGGATTCATGCTCGAGGTCCTGTAGGAGTTGAAGGATTGCTAACAACAAGATGGATTCTGAGAGGGAACGGGCAGATTGTAGACGCGGATAGAGGAGTCGAGTACACCCACAAGGACCTGCTTAGTTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004350 GO:0008150 GO:0008152 GO:0016491 GO:0016620 GO:0016903 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 ko01110 ko01230 map00330 map01100 map01110 map01230

Pfam Domains

Protein Families

AA_kinase Aldedh

Protein Analysis

701

Amino Acids

75.51

Weight (kDa)

6.14

Isoelectric Point (pI)

28.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	15 - 244	2.6e-29	Amino acid kinase family
Aldedh	PF00171	276 - 540	3.5e-07	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39800 AT2G39800 AT2G39800 AT2G39800 AT3G55610 AT3G55610
fragaria_vesca	FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_6g12980 FvH4_7g23420 FvH4_7g23420 FvH4_7g23420 FvH4_7g23430
malus_domestica	MD00G1141100.v1.1 MD01G1140200.v1.1 MD04G1136200.v1.1 MD07G1204500.v1.1 MD12G1150700.v1.1
prunus_persica	Prupe.2G240800_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1 Prupe.6G262300_v2.0.a1
pyrus_communis	pycom01g16070 pycom04g12400 pycom07g19110 pycom12g14450
rosa_chinensis	RchiOBHm_Chr1g0368541 RchiOBHm_Chr1g0368561 RchiOBHm_Chr3g0465091
rosa_laevigata	RLG00000024656 RLG00000027203 RLG00000027204
rosa_multiflora	Rmu_co8458369.1_g000001 Rmu_co8474891.1_g000001 Rmu_sc0003386.1_g000013 Rmu_sc0011394.1_g000007
rosa_roxburghii	Rroxscaffold_4G00288440 Rroxscaffold_4G00288450 Rroxscaffold_6G00415250
rosa_rugosa	Rorug01G0342800 Rorug01G0342900 Rorug03G0075300 Rorug03G0075400
rosa_samantha	Rh1AG350100 Rh1AG350200 Rh1BG313300 Rh1BG313400 Rh1CG328000 Rh1CG328100 Rh1DG344700 Rh1DG344800 Rh3BG139000 Rh3CG141100 Rh3CG149400 Rh3DG140200
rosa_wichuraiana	Rw3G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2097
AccI	GTMKAC	3 cut(s)	1563, 1881, 2052
AccII	CGCG	3 cut(s)	1024, 1933, 2057
AciI	CCGC	4 cut(s)	561, 1518, 1629, 2057
AclWI	GGATC	4 cut(s)	8, 21, 898, 1620
AcoI	YGGCCR	4 cut(s)	196, 489, 846, 1102
AcsI	RAATTY	2 cut(s)	145, 909
AcuI	CTGAAG	3 cut(s)	162, 1863, 1881
AcvI	CACGTG	1 cut(s)	839
AfaI	GTAC	7 cut(s)	433, 1071, 1605, 1742, 1912, 1966, 2075
AfeI	AGCGCT	1 cut(s)	1888
AfiI	CCNNNNNNNGG	3 cut(s)	223, 1334, 1475
AgsI	TTSAA	4 cut(s)	412, 1235, 1766, 2003
AhlI	ACTAGT	1 cut(s)	728
AjnI	CCWGG	3 cut(s)	150, 990, 1039
AjuI	GAANNNNNNNTTGG	4 cut(s)	618, 650, 1083, 1115
AleI	CACNNNNGTG	1 cut(s)	808
Alw21I	GWGCWC	4 cut(s)	121, 838, 886, 1822
Alw26I	GTCTC	4 cut(s)	765, 1197, 1359, 1712
Alw44I	GTGCAC	1 cut(s)	834
AlwI	GGATC	4 cut(s)	8, 21, 898, 1620
AlwNI	CAGNNNCTG	3 cut(s)	185, 1328, 1700
Ama87I	CYCGRG	2 cut(s)	81, 1983
Aor51HI	AGCGCT	1 cut(s)	1888
AoxI	GGCC	6 cut(s)	196, 489, 550, 846, 1011, 1102
ApaLI	GTGCAC	1 cut(s)	834
ApoI	RAATTY	2 cut(s)	145, 909
Asp700I	GAANNNNTTC	1 cut(s)	1596
AspA2I	CCTAGG	1 cut(s)	1688
AspLEI	GCGC	4 cut(s)	859, 1889, 1933, 1935
AspS9I	GGNCC	7 cut(s)	550, 563, 574, 1012, 1685, 1988, 2086
AsuHPI	GGTGA	5 cut(s)	98, 184, 409, 962, 1300
AvaI	CYCGRG	2 cut(s)	81, 1983
AvaII	GGWCC	5 cut(s)	563, 574, 1685, 1988, 2086
AvrII	CCTAGG	1 cut(s)	1688
BaeGI	GKGCMC	1 cut(s)	838
BamHI	GGATCC	1 cut(s)	13
BanII	GRGCYC	2 cut(s)	886, 1098
BauI	CACGAG	1 cut(s)	1362
BbrPI	CACGTG	1 cut(s)	839
BbsI	GAAGAC	2 cut(s)	1124, 1241
Bbv12I	GWGCWC	4 cut(s)	121, 838, 886, 1822
BbvCI	CCTCAGC	1 cut(s)	1312
BccI	CCATC	8 cut(s)	83, 266, 1481, 1582, 1619, 1841, 1919, 2016
BceAI	ACGGC	2 cut(s)	833, 1089
BcgI	CGANNNNNNTGC	4 cut(s)	1327, 1361, 1871, 1905
BciT130I	CCWGG	3 cut(s)	152, 992, 1041
BcoDI	GTCTC	4 cut(s)	765, 1197, 1359, 1712
BcuI	ACTAGT	1 cut(s)	728
BfaI	CTAG	7 cut(s)	113, 435, 729, 870, 887, 1419, 1689
BfmI	CTRYAG	4 cut(s)	556, 816, 1890, 1992
BfoI	RGCGCY	1 cut(s)	1890
BfuAI	ACCTGC	1 cut(s)	2097
BglI	GCCNNNNNGGC	1 cut(s)	938
BlnI	CCTAGG	1 cut(s)	1688
BmcAI	AGTACT	1 cut(s)	433
Bme1390I	CCNGG	3 cut(s)	152, 992, 1041
Bme18I	GGWCC	5 cut(s)	563, 574, 1685, 1988, 2086
BmeT110I	CYCGRG	2 cut(s)	81, 1983
BmgT120I	GGNCC	7 cut(s)	550, 563, 574, 1012, 1685, 1988, 2086
BmiI	GGNNCC	2 cut(s)	15, 576
BmrFI	CCNGG	3 cut(s)	152, 992, 1041
BmrI	ACTGGG	1 cut(s)	1952
BmsI	GCATC	6 cut(s)	790, 875, 919, 1192, 1543, 1842
BmuI	ACTGGG	1 cut(s)	1952
BpiI	GAAGAC	2 cut(s)	1124, 1241
BplI	GAGNNNNNCTC	2 cut(s)	1709, 1741
Bpu10I	CCTNAGC	1 cut(s)	1312
BpuEI	CTTGAG	3 cut(s)	879, 1370, 1860
Bsa29I	ATCGAT	1 cut(s)	1404
BsaAI	YACGTR	3 cut(s)	604, 839, 1073
BsaBI	GATNNNNATC	1 cut(s)	404
BsaI	GGTCTC	1 cut(s)	765
BsaJI	CCNNGG	6 cut(s)	150, 151, 933, 990, 1040, 1688
BsaWI	WCCGGW	2 cut(s)	216, 1198
BsaXI	ACNNNNNCTCC	2 cut(s)	1139, 1169
Bsc4I	CCNNNNNNNGG	3 cut(s)	223, 1334, 1475
Bse118I	RCCGGY	2 cut(s)	198, 491
Bse1I	ACTGG	2 cut(s)	1083, 1947
Bse3DI	GCAATG	1 cut(s)	1588
Bse8I	GATNNNNATC	1 cut(s)	404
BseBI	CCWGG	3 cut(s)	152, 992, 1041
BseCI	ATCGAT	1 cut(s)	1404
BseDI	CCNNGG	6 cut(s)	150, 151, 933, 990, 1040, 1688
BseGI	GGATG	4 cut(s)	346, 1207, 1413, 1558
BseJI	GATNNNNATC	1 cut(s)	404
BseLI	CCNNNNNNNGG	3 cut(s)	223, 1334, 1475
BseMI	GCAATG	1 cut(s)	1588
BseMII	CTCAG	4 cut(s)	383, 1326, 1773, 2021
BseNI	ACTGG	2 cut(s)	1083, 1947
BsePI	GCGCGC	1 cut(s)	1931
BseRI	GAGGAG	2 cut(s)	916, 2079
BseSI	GKGCMC	1 cut(s)	838
BsgI	GTGCAG	3 cut(s)	306, 717, 1968
Bsh1236I	CGCG	3 cut(s)	1024, 1933, 2057
Bsh1285I	CGRYCG	1 cut(s)	1199
BshFI	GGCC	6 cut(s)	198, 491, 552, 848, 1013, 1104
BshVI	ATCGAT	1 cut(s)	1404
BsiEI	CGRYCG	1 cut(s)	1199
BsiHKAI	GWGCWC	4 cut(s)	121, 838, 886, 1822
BsiHKCI	CYCGRG	2 cut(s)	81, 1983
BsiSI	CCGG	4 cut(s)	199, 217, 492, 1199
BslFI	GGGAC	1 cut(s)	488
BslI	CCNNNNNNNGG	3 cut(s)	223, 1334, 1475
BsmAI	GTCTC	4 cut(s)	765, 1197, 1359, 1712
BsmBI	CGTCTC	1 cut(s)	1359
BsmFI	GGGAC	1 cut(s)	488
BsnI	GGCC	6 cut(s)	198, 491, 552, 848, 1013, 1104
Bso31I	GGTCTC	1 cut(s)	765
BsoBI	CYCGRG	2 cut(s)	81, 1983
Bsp1286I	GDGCHC	5 cut(s)	121, 838, 886, 1098, 1822
Bsp1407I	TGTACA	1 cut(s)	1603
Bsp143I	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
BspACI	CCGC	4 cut(s)	561, 1518, 1629, 2057
BspANI	GGCC	6 cut(s)	198, 491, 552, 848, 1013, 1104
BspCNI	CTCAG	4 cut(s)	384, 1325, 1772, 2022
BspDI	ATCGAT	1 cut(s)	1404
BspFNI	CGCG	3 cut(s)	1024, 1933, 2057
BspHI	TCATGA	1 cut(s)	1804
BspLI	GGNNCC	2 cut(s)	15, 576
BspMAI	CTGCAG	1 cut(s)	1894
BspMI	ACCTGC	1 cut(s)	2097
BspPI	GGATC	4 cut(s)	8, 21, 898, 1620
BspQI	GCTCTTC	1 cut(s)	1086
BspTNI	GGTCTC	1 cut(s)	765
BsrDI	GCAATG	1 cut(s)	1588
BsrFI	RCCGGY	2 cut(s)	198, 491
BsrGI	TGTACA	1 cut(s)	1603
BsrI	ACTGG	2 cut(s)	1083, 1947
BssAI	RCCGGY	2 cut(s)	198, 491
BssECI	CCNNGG	6 cut(s)	150, 151, 933, 990, 1040, 1688
BssHII	GCGCGC	1 cut(s)	1931
BssMI	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
BssSI	CACGAG	1 cut(s)	1362
BssT1I	CCWWGG	2 cut(s)	933, 1688
Bst2BI	CACGAG	1 cut(s)	1362
Bst2UI	CCWGG	3 cut(s)	152, 992, 1041
Bst4CI	ACNGT	7 cut(s)	373, 485, 787, 817, 876, 1155, 1745
Bst6I	CTCTTC	1 cut(s)	1086
BstAPI	GCANNNNNTGC	1 cut(s)	1700
BstAUI	TGTACA	1 cut(s)	1603
BstBAI	YACGTR	3 cut(s)	604, 839, 1073
BstC8I	GCNNGC	5 cut(s)	200, 1128, 1579, 1756, 1933
BstDEI	CTNAG	8 cut(s)	209, 392, 1177, 1312, 1461, 1759, 2030, 2093
BstF5I	GGATG	4 cut(s)	346, 1207, 1413, 1558
BstFNI	CGCG	3 cut(s)	1024, 1933, 2057
BstH2I	RGCGCY	1 cut(s)	1890
BstHHI	GCGC	4 cut(s)	859, 1889, 1933, 1935
BstKTI	GATC	7 cut(s)	16, 247, 893, 1283, 1404, 1408, 1615
BstMAI	GTCTC	4 cut(s)	765, 1197, 1359, 1712
BstMBI	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
BstMCI	CGRYCG	1 cut(s)	1199
BstNI	CCWGG	3 cut(s)	152, 992, 1041
BstSCI	CCNGG	3 cut(s)	150, 990, 1039
BstSFI	CTRYAG	4 cut(s)	556, 816, 1890, 1992
BstSLI	GKGCMC	1 cut(s)	838
BstSNI	TACGTA	1 cut(s)	1073
BstUI	CGCG	3 cut(s)	1024, 1933, 2057
BstV2I	GAAGAC	2 cut(s)	1124, 1241
BstX2I	RGATCY	3 cut(s)	13, 890, 1612
BstXI	CCANNNNNNTGG	1 cut(s)	998
BstYI	RGATCY	3 cut(s)	13, 890, 1612
Bsu15I	ATCGAT	1 cut(s)	1404
BsuRI	GGCC	6 cut(s)	198, 491, 552, 848, 1013, 1104
BsuTUI	ATCGAT	1 cut(s)	1404
BtgZI	GCGATG	3 cut(s)	555, 1601, 1638
BtsCI	GGATG	4 cut(s)	346, 1207, 1413, 1558
BtsIMutI	CAGTG	3 cut(s)	783, 1824, 1839
BveI	ACCTGC	1 cut(s)	2097
Cac8I	GCNNGC	5 cut(s)	200, 1128, 1579, 1756, 1933
CaiI	CAGNNNCTG	3 cut(s)	185, 1328, 1700
CciI	TCATGA	1 cut(s)	1804
CfoI	GCGC	4 cut(s)	859, 1889, 1933, 1935
Cfr10I	RCCGGY	2 cut(s)	198, 491
Cfr13I	GGNCC	7 cut(s)	550, 563, 574, 1012, 1685, 1988, 2086
ClaI	ATCGAT	1 cut(s)	1404
CseI	GACGC	2 cut(s)	431, 2063
Csp6I	GTAC	7 cut(s)	432, 1070, 1604, 1741, 1911, 1965, 2074
CviAII	CATG	7 cut(s)	844, 1087, 1158, 1481, 1805, 1811, 1979
CviQI	GTAC	7 cut(s)	432, 1070, 1604, 1741, 1911, 1965, 2074
DdeI	CTNAG	8 cut(s)	209, 392, 1177, 1312, 1461, 1759, 2030, 2093
DpnI	GATC	7 cut(s)	15, 246, 892, 1282, 1403, 1407, 1614
DpnII	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
EaeI	YGGCCR	4 cut(s)	196, 489, 846, 1102
Eam1104I	CTCTTC	1 cut(s)	1086
EarI	CTCTTC	1 cut(s)	1086
Ecl136II	GAGCTC	1 cut(s)	884
Eco105I	TACGTA	1 cut(s)	1073
Eco130I	CCWWGG	2 cut(s)	933, 1688
Eco24I	GRGCYC	2 cut(s)	886, 1098
Eco31I	GGTCTC	1 cut(s)	765
Eco47I	GGWCC	5 cut(s)	563, 574, 1685, 1988, 2086
Eco47III	AGCGCT	1 cut(s)	1888
Eco53kI	GAGCTC	1 cut(s)	884
Eco57I	CTGAAG	3 cut(s)	162, 1863, 1881
Eco72I	CACGTG	1 cut(s)	839
Eco88I	CYCGRG	2 cut(s)	81, 1983
EcoICRI	GAGCTC	1 cut(s)	884
EcoO109I	RGGNCCY	4 cut(s)	550, 1012, 1988, 2086
EcoRII	CCWGG	3 cut(s)	150, 990, 1039
EcoT14I	CCWWGG	2 cut(s)	933, 1688
EcoT38I	GRGCYC	2 cut(s)	886, 1098
ErhI	CCWWGG	2 cut(s)	933, 1688
Esp3I	CGTCTC	1 cut(s)	1359
FaeI	CATG	7 cut(s)	847, 1090, 1161, 1484, 1808, 1814, 1982
FalI	AAGNNNNNCTT	2 cut(s)	507, 539
FaqI	GGGAC	1 cut(s)	488
FatI	CATG	7 cut(s)	843, 1086, 1157, 1480, 1804, 1810, 1978
FauI	CCCGC	1 cut(s)	1622
FblI	GTMKAC	3 cut(s)	1563, 1881, 2052
FokI	GGATG	4 cut(s)	353, 1214, 1400, 1565
FriOI	GRGCYC	2 cut(s)	886, 1098
FspBI	CTAG	7 cut(s)	113, 435, 729, 870, 887, 1419, 1689
GlaI	GCGC	4 cut(s)	858, 1888, 1932, 1934
HaeII	RGCGCY	1 cut(s)	1890
HaeIII	GGCC	6 cut(s)	198, 491, 552, 848, 1013, 1104
HapII	CCGG	4 cut(s)	199, 217, 492, 1199
HgaI	GACGC	2 cut(s)	431, 2063
HhaI	GCGC	4 cut(s)	859, 1889, 1933, 1935
Hin1II	CATG	7 cut(s)	847, 1090, 1161, 1484, 1808, 1814, 1982
Hin6I	GCGC	4 cut(s)	857, 1887, 1931, 1933
HinP1I	GCGC	4 cut(s)	857, 1887, 1931, 1933
HincII	GTYRAC	3 cut(s)	1458, 1510, 1882
HindII	GTYRAC	3 cut(s)	1458, 1510, 1882
HindIII	AAGCTT	2 cut(s)	345, 1433
HpaII	CCGG	4 cut(s)	199, 217, 492, 1199
HphI	GGTGA	5 cut(s)	98, 184, 409, 962, 1300
Hpy188I	TCNGA	9 cut(s)	65, 353, 367, 881, 1215, 1242, 1349, 1651, 2031
Hpy99I	CGWCG	1 cut(s)	923
HpyAV	CCTTC	8 cut(s)	271, 533, 824, 941, 1003, 1127, 1721, 1997
HpyCH4III	ACNGT	7 cut(s)	373, 485, 787, 817, 876, 1155, 1745
HpyCH4IV	ACGT	6 cut(s)	603, 838, 921, 1072, 1500, 1905
HpyF3I	CTNAG	8 cut(s)	209, 392, 1177, 1312, 1461, 1759, 2030, 2093
HpySE526I	ACGT	6 cut(s)	603, 838, 921, 1072, 1500, 1905
Hsp92II	CATG	7 cut(s)	847, 1090, 1161, 1484, 1808, 1814, 1982
HspAI	GCGC	4 cut(s)	857, 1887, 1931, 1933
KroI	GCCGGC	1 cut(s)	198
KroNI	GCCGGC	1 cut(s)	200
Kzo9I	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
LguI	GCTCTTC	1 cut(s)	1086
LmnI	GCTCC	3 cut(s)	182, 448, 1928
LweI	GCATC	6 cut(s)	790, 875, 919, 1192, 1543, 1842
MaeI	CTAG	7 cut(s)	113, 435, 729, 870, 887, 1419, 1689
MaeII	ACGT	6 cut(s)	603, 838, 921, 1072, 1500, 1905
MaeIII	GTNAC	8 cut(s)	76, 172, 298, 319, 839, 1496, 1704, 1837
MalI	GATC	7 cut(s)	15, 246, 892, 1282, 1403, 1407, 1614
MboI	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
MfeI	CAATTG	1 cut(s)	1791
MflI	RGATCY	3 cut(s)	13, 890, 1612
MhlI	GDGCHC	5 cut(s)	121, 838, 886, 1098, 1822
MluCI	AATT	9 cut(s)	145, 909, 954, 1230, 1446, 1542, 1644, 1767, 1791
MlyI	GAGTC	4 cut(s)	1199, 1463, 1718, 2076
MmeI	TCCRAC	3 cut(s)	43, 979, 1220
MroNI	GCCGGC	1 cut(s)	198
MroXI	GAANNNNTTC	1 cut(s)	1596
MseI	TTAA	9 cut(s)	57, 135, 386, 536, 590, 822, 1257, 1449, 1635
MslI	CAYNNNNRTG	7 cut(s)	798, 808, 1485, 1503, 1803, 1809, 1815
MspA1I	CMGCKG	1 cut(s)	71
MspI	CCGG	4 cut(s)	199, 217, 492, 1199
MspR9I	CCNGG	3 cut(s)	152, 992, 1041
MunI	CAATTG	1 cut(s)	1791
MvaI	CCWGG	3 cut(s)	152, 992, 1041
MvnI	CGCG	3 cut(s)	1024, 1933, 2057
NaeI	GCCGGC	1 cut(s)	200
NdeII	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
NgoMIV	GCCGGC	1 cut(s)	198
NlaIII	CATG	7 cut(s)	847, 1090, 1161, 1484, 1808, 1814, 1982
NlaIV	GGNNCC	2 cut(s)	15, 576
NmuCI	GTSAC	7 cut(s)	76, 172, 298, 319, 839, 1496, 1837
OliI	CACNNNNGTG	1 cut(s)	808
PaeR7I	CTCGAG	1 cut(s)	1983
PagI	TCATGA	1 cut(s)	1804
PasI	CCCWGGG	1 cut(s)	151
PauI	GCGCGC	1 cut(s)	1931
PciSI	GCTCTTC	1 cut(s)	1086
PcsI	WCGNNNNNNNCGW	1 cut(s)	772
PdiI	GCCGGC	1 cut(s)	200
PdmI	GAANNNNTTC	1 cut(s)	1596
PfeI	GAWTC	7 cut(s)	400, 455, 711, 1372, 1661, 1975, 2026
PleI	GAGTC	4 cut(s)	1198, 1462, 1718, 2075
PmaCI	CACGTG	1 cut(s)	839
PmlI	CACGTG	1 cut(s)	839
PpsI	GAGTC	4 cut(s)	1198, 1462, 1718, 2075
Ppu21I	YACGTR	3 cut(s)	604, 839, 1073
PpuMI	RGGWCCY	2 cut(s)	1988, 2086
Psp124BI	GAGCTC	1 cut(s)	886
Psp5II	RGGWCCY	2 cut(s)	1988, 2086
Psp6I	CCWGG	3 cut(s)	150, 990, 1039
PspCI	CACGTG	1 cut(s)	839
PspGI	CCWGG	3 cut(s)	150, 990, 1039
PspN4I	GGNNCC	2 cut(s)	15, 576
PspPI	GGNCC	7 cut(s)	550, 563, 574, 1012, 1685, 1988, 2086
PspPPI	RGGWCCY	2 cut(s)	1988, 2086
PspXI	VCTCGAGB	1 cut(s)	1983
PstI	CTGCAG	1 cut(s)	1894
PstNI	CAGNNNCTG	3 cut(s)	185, 1328, 1700
PsuI	RGATCY	3 cut(s)	13, 890, 1612
PteI	GCGCGC	1 cut(s)	1931
PvuII	CAGCTG	1 cut(s)	71
RsaI	GTAC	7 cut(s)	433, 1071, 1605, 1742, 1912, 1966, 2075
RsaNI	GTAC	7 cut(s)	432, 1070, 1604, 1741, 1911, 1965, 2074
RseI	CAYNNNNRTG	7 cut(s)	798, 808, 1485, 1503, 1803, 1809, 1815
SacI	GAGCTC	1 cut(s)	886
SalI	GTCGAC	1 cut(s)	1880
SapI	GCTCTTC	1 cut(s)	1086
SaqAI	TTAA	9 cut(s)	57, 135, 386, 536, 590, 822, 1257, 1449, 1635
Sau3AI	GATC	7 cut(s)	13, 244, 890, 1280, 1401, 1405, 1612
Sau96I	GGNCC	7 cut(s)	550, 563, 574, 1012, 1685, 1988, 2086
ScaI	AGTACT	1 cut(s)	433
SchI	GAGTC	4 cut(s)	1199, 1463, 1718, 2076
ScrFI	CCNGG	3 cut(s)	152, 992, 1041
SduI	GDGCHC	5 cut(s)	121, 838, 886, 1098, 1822
SfaNI	GCATC	6 cut(s)	790, 875, 919, 1192, 1543, 1842
SfcI	CTRYAG	4 cut(s)	556, 816, 1890, 1992
Sfr274I	CTCGAG	1 cut(s)	1983
SinI	GGWCC	5 cut(s)	563, 574, 1685, 1988, 2086
SlaI	CTCGAG	1 cut(s)	1983
SmiMI	CAYNNNNRTG	7 cut(s)	798, 808, 1485, 1503, 1803, 1809, 1815
SmlI	CTYRAG	4 cut(s)	894, 1385, 1875, 1983
SmoI	CTYRAG	4 cut(s)	894, 1385, 1875, 1983
SnaBI	TACGTA	1 cut(s)	1073
SpeI	ACTAGT	1 cut(s)	728
Sse9I	AATT	9 cut(s)	145, 909, 954, 1230, 1446, 1542, 1644, 1767, 1791
SsiI	CCGC	4 cut(s)	561, 1518, 1629, 2057
SspMI	CTAG	7 cut(s)	113, 435, 729, 870, 887, 1419, 1689
SstI	GAGCTC	1 cut(s)	886
StyD4I	CCNGG	3 cut(s)	150, 990, 1039
StyI	CCWWGG	2 cut(s)	933, 1688
TaaI	ACNGT	7 cut(s)	373, 485, 787, 817, 876, 1155, 1745
TaiI	ACGT	6 cut(s)	606, 841, 924, 1075, 1503, 1908
TaqI	TCGA	7 cut(s)	918, 1195, 1392, 1404, 1881, 1984, 2070
TaqII	GACCGA	2 cut(s)	789, 1136
TasI	AATT	9 cut(s)	145, 909, 954, 1230, 1446, 1542, 1644, 1767, 1791
TatI	WGTACW	5 cut(s)	431, 1603, 1740, 1910, 2073
TfiI	GAWTC	7 cut(s)	400, 455, 711, 1372, 1661, 1975, 2026
Tru1I	TTAA	9 cut(s)	57, 135, 386, 536, 590, 822, 1257, 1449, 1635
Tru9I	TTAA	9 cut(s)	57, 135, 386, 536, 590, 822, 1257, 1449, 1635
TscAI	CASTG	3 cut(s)	790, 1831, 1846
TseFI	GTSAC	7 cut(s)	76, 172, 298, 319, 839, 1496, 1837
Tsp45I	GTSAC	7 cut(s)	76, 172, 298, 319, 839, 1496, 1837
TspGWI	ACGGA	2 cut(s)	338, 587
TspRI	CASTG	3 cut(s)	790, 1831, 1846
VneI	GTGCAC	1 cut(s)	834
VpaK11BI	GGWCC	5 cut(s)	563, 574, 1685, 1988, 2086
XapI	RAATTY	2 cut(s)	145, 909
XbaI	TCTAGA	1 cut(s)	869
XhoI	CTCGAG	1 cut(s)	1983
XmaJI	CCTAGG	1 cut(s)	1688
XmiI	GTMKAC	3 cut(s)	1563, 1881, 2052
XmnI	GAANNNNTTC	1 cut(s)	1596
XspI	CTAG	7 cut(s)	113, 435, 729, 870, 887, 1419, 1689
ZrmI	AGTACT	1 cut(s)	433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.