Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0001898

Physical Location & Seq

Genomic Coordinates Forward (+)

27643863 .. 27650352

Gene Structure 6490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1230600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGACTCTCCACTCCATAGTCATACAGAAGCTGCTCAGCACCAACGCCCATTTGGGCCGCCGTGTCGCCGCCCACCACTTCAAGCAGTTCACCTACGGAACCCGCAATGGCATGGCCATCATCGACTCCGACCGCACCCTCATCTGCCTCCGCAGCGCCGCCGAGTTCATCGCCGCCCTCGCCCAGCAGAAGGCCCGCTTCATGTTCGTCAACACCAACTCCCTCTGGGACGAAATCATCGAGCAGATGACGAAGAGGATTGGGTGCTACAGCCCCTCCATGAACATGCTCTGGCGCACTGGCGGCTTCCTCACGAACAGCCACAGTCCCAAGAAGTTCAGGTCTCGCCATAAGAAGATTTGCTTCGGCCCCACCCAGCCCCCGGATTGCCTTGTGGTTTTTGACACGGATCGAAAATCTTCGGTGATTCTCGAGGCTGATAGGTTGCAGATTCCAATTGTTTCGCTTGTCGATTCGGCAATGCCATTGGAGTACTATAAGAAGATCACCTATCCGATTCCCGCCAATGACTCGGTTCAGTTCGTGTACTTGGTGTGCAATTTGATTACCAAGACGTTTCTTCTCCAGCAGAAGAGAAATGGTGCTGTTGCAGCGGACGAGGGGACGAGGGAGAAAGTGGAGAGTATAGAGGAGAGTAAGACTACCAACAAGGCTGAGTTGCTTGTGCTTCCTTACAACTTGTTACCCATTTCTCCTGGTGTTGAAGAAACTGAGGAGCTCTTAGACAAGCTTGTTGTGCTCAAGTTCAATGGAGCTTTGGGTACAAATATGGGATTCGATGGCCCCAAGTCTGCTATTGAAATCCGTGATGGGTTGACATCTTTGGACTTAATTGTTAAGCAAATTGAGACTCTCCGTTCTAAGTACAGATGCAGTGTTCCTTTGCTCCTGATGAACACACCAACGACACATGAAGATACCGTCAAGGTCTTGGAGAAATATTCCATTTCAAACATTGATATCCATTCTCTTAAACAGACCGAACAACCACAGCTGAAGTCACATGGAGTAGGACGGGGTGGTGAAGATGAACTGTATCCTTCTGGACATGGAGCATTGTTCCTTTCCCTTGTCAAAAGTGGAACTCTTGATGTCCTATTATCACAGGGTAAGGAGTATATCCTTCTGGTTAACTCAGACAACGTGGCTGCTACAATTGACCCAAAAATTTTAAACCATTTGATTGAAAACAAAATTGAATATTGTATGGAGGTCACACCTACCTCTTATGATTCAGATTTTAGCAACATTGGCTCACGCCTACAGAAGTTTGAGCTTGCGGAAATAGCTCAGAACTTTGTTAAACATTCAATGGACAAATTCAAACTTCTTGATACTGGCAGCTTGTGGGTCAATTTGAAAGCCGTTAAAAGGCTTTTGGATACAGATGCAATAAAGATAGAAGACATCTCTGTTTCAAAGGGAACGGAGAGTGATCAAGTTCCTTTGCAAGAAACGGCAGCTGGTTCAGCAATACGGTTCTTTGATCGTGCTATTGGTGTCAATGTTCCCCATTCTCGATCCCTTTCAATCAATAAAACATCAGACCTACTCCTTTTAAAGTCAGATATCTTCATCTGCGATGGAGGAGTTCTAGTTCGGAATATAGCTAGAACAAATCCCGAAGATCCTGTTATTGAATTAGGACCTGAATTCGAAAAGGTCAGTGACCTCCTGAGCCGATTTAAGTCCATACCCGATATTATGGACCTGGATAGATTGAAGGTGACTGGTGACGTATGGTTTGGAGCTGGTATAACTCTCAAGGGGAAAGTAACTATTGTTGCAAAACCCGGGATGAAATTGGAAATTCCTGACGGAGTGGTAATAGAGAATAAGGACATCAACGACCCTTCAGACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000313 GO:0000314 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005761 GO:0005763 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015935 GO:0019538 GO:0031974 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:0098798 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00040 ko00052 ko00500 ko00520 ko01100 ko01130 ko03010 map00040 map00052 map00500 map00520 map01100 map01130 map03010

Pfam Domains

Protein Families

Ribosomal_S2 UDPGP

Protein Analysis

629

Amino Acids

69.85

Weight (kDa)

6.27

Isoelectric Point (pI)

39.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_S2	PF00318	11 - 113	2.8e-15	Ribosomal protein S2
Ribosomal_S2	PF00318	126 - 192	2.8e-10	Ribosomal protein S2
UDPGP	PF01704	212 - 596	4e-108	UTP--glucose-1-phosphate uridylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03600
fragaria_vesca	FvH4_7g08140
malus_domestica	MD02G1230600.v1.1
prunus_persica	Prupe.2G107500_v2.0.a1
pyrus_communis	pycom02g19970 pycom07g06540
rosa_chinensis	RchiOBHm_Chr1g0341081 RchiOBHm_Chr1g0363821 RchiOBHm_Chr1g0383121 RchiOBHm_Chr2g0085551 RchiOBHm_Chr3g0481141 RchiOBHm_Chr5g0027611 RchiOBHm_Chr5g0054321 RchiOBHm_Chr6g0246101
rosa_laevigata	RLG00000003952 RLG00000006546 RLG00000013359 RLG00000020654 RLG00000029063
rosa_multiflora	Rmu_sc0000533.1_g000047 Rmu_sc0000821.1_g000002 Rmu_sc0001211.1_g000068 Rmu_sc0002200.1_g000002 Rmu_sc0004332.1_g000001 Rmu_sc0004577.1_g000014 Rmu_sc0008563.1_g000010 Rmu_sc0012351.1_g000004 Rmu_ssc0000190.1_g000008
rosa_roxburghii	Rroxscaffold_1G00011600 Rroxscaffold_4G00311710
rosa_rugosa	Rorug01G0160000.1 Rorug05G0092000
rosa_samantha	Rh1AG174300 Rh1BG142600 Rh1BG221400 Rh1CG162100 Rh1CG365900 Rh1DG174200 Rh1DG248400 Rh1DG383600 Rh3AG240800 Rh5AG444100 Rh5DG194400
rosa_wichuraiana	Rw1G014550 Rw4G015450 Rw5G024540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	3 cut(s)	417, 1536, 1643
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	4 cut(s)	1188, 1340, 1673, 1830
AcuI	CTGAAG	2 cut(s)	1037, 1860
AfaI	GTAC	4 cut(s)	494, 548, 784, 887
AfiI	CCNNNNNNNGG	3 cut(s)	190, 382, 1392
AjnI	CCWGG	2 cut(s)	715, 1731
AloI	GAACNNNNNNTCC	2 cut(s)	1602, 1634
Alw21I	GWGCWC	2 cut(s)	741, 762
Alw26I	GTCTC	2 cut(s)	348, 863
AlwI	GGATC	3 cut(s)	417, 1536, 1643
AlwNI	CAGNNNCTG	1 cut(s)	31
Ama87I	CYCGRG	2 cut(s)	431, 1814
AoxI	GGCC	5 cut(s)	55, 114, 192, 367, 802
ApeKI	GCWGC	6 cut(s)	31, 153, 611, 1169, 1362, 1481
ApoI	RAATTY	4 cut(s)	1188, 1340, 1673, 1830
ArsI	GACNNNNNNTTYG	2 cut(s)	1748, 1780
Asp700I	GAANNNNTTC	1 cut(s)	418
AspLEI	GCGC	2 cut(s)	158, 297
AspS9I	GGNCC	6 cut(s)	55, 193, 368, 803, 1667, 1729
AsuC2I	CCSGG	3 cut(s)	383, 1815, 1816
AsuHPI	GGTGA	6 cut(s)	82, 436, 499, 1055, 1759, 1766
AsuII	TTCGAA	1 cut(s)	1677
AvaI	CYCGRG	2 cut(s)	431, 1814
AvaII	GGWCC	2 cut(s)	1667, 1729
BalI	TGGCCA	1 cut(s)	116
BanII	GRGCYC	1 cut(s)	741
BbsI	GAAGAC	1 cut(s)	1431
Bbv12I	GWGCWC	2 cut(s)	741, 762
BbvI	GCAGC	6 cut(s)	18, 165, 623, 1156, 1374, 1493
BccI	CCATC	4 cut(s)	125, 794, 824, 1598
BceAI	ACGGC	3 cut(s)	45, 1370, 1494
BciT130I	CCWGG	2 cut(s)	717, 1733
BciVI	GTATCC	2 cut(s)	1068, 1396
BclI	TGATCA	1 cut(s)	1456
BcnI	CCSGG	3 cut(s)	383, 1815, 1816
BcoDI	GTCTC	2 cut(s)	348, 863
BfaI	CTAG	2 cut(s)	1616, 1632
BfmI	CTRYAG	2 cut(s)	268, 1283
BfoI	RGCGCY	1 cut(s)	159
BfuI	GTATCC	2 cut(s)	1068, 1396
BlpI	GCTNAGC	1 cut(s)	35
BmcAI	AGTACT	1 cut(s)	494
Bme1390I	CCNGG	5 cut(s)	383, 717, 1733, 1815, 1816
Bme18I	GGWCC	2 cut(s)	1667, 1729
BmeT110I	CYCGRG	2 cut(s)	431, 1814
BmgT120I	GGNCC	6 cut(s)	55, 193, 368, 803, 1667, 1729
BmiI	GGNNCC	3 cut(s)	100, 370, 805
BmrFI	CCNGG	5 cut(s)	383, 717, 1733, 1815, 1816
BmsI	GCATC	2 cut(s)	881, 1399
BpiI	GAAGAC	1 cut(s)	1431
BpmI	CTGGAG	1 cut(s)	569
Bpu10I	CCTNAGC	1 cut(s)	1697
Bpu1102I	GCTNAGC	1 cut(s)	35
Bpu14I	TTCGAA	1 cut(s)	1677
BpuEI	CTTGAG	2 cut(s)	746, 1769
BpuMI	CCSGG	3 cut(s)	383, 1815, 1816
BsaI	GGTCTC	1 cut(s)	348
BsaJI	CCNNGG	2 cut(s)	381, 1814
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 260, 290, 1602, 1632
Bsc4I	CCNNNNNNNGG	3 cut(s)	190, 382, 1392
Bse1I	ACTGG	3 cut(s)	304, 1363, 1756
Bse3DI	GCAATG	2 cut(s)	112, 486
BseBI	CCWGG	2 cut(s)	717, 1733
BseDI	CCNNGG	2 cut(s)	381, 1814
BseGI	GGATG	1 cut(s)	1824
BseLI	CCNNNNNNNGG	3 cut(s)	190, 382, 1392
BseMI	GCAATG	2 cut(s)	112, 486
BseMII	CTCAG	6 cut(s)	49, 666, 723, 1170, 1325, 1688
BseNI	ACTGG	3 cut(s)	304, 1363, 1756
BseRI	GAGGAG	3 cut(s)	665, 749, 1623
BseXI	GCAGC	6 cut(s)	18, 165, 623, 1156, 1374, 1493
BseYI	CCCAGC	2 cut(s)	183, 375
Bsh1285I	CGRYCG	1 cut(s)	133
BshFI	GGCC	5 cut(s)	57, 116, 194, 369, 804
BsiEI	CGRYCG	1 cut(s)	133
BsiHKAI	GWGCWC	2 cut(s)	741, 762
BsiHKCI	CYCGRG	2 cut(s)	431, 1814
BsiSI	CCGG	2 cut(s)	383, 1815
BslFI	GGGAC	3 cut(s)	242, 312, 637
BslI	CCNNNNNNNGG	3 cut(s)	190, 382, 1392
BsmAI	GTCTC	2 cut(s)	348, 863
BsmFI	GGGAC	3 cut(s)	242, 312, 637
BsnI	GGCC	5 cut(s)	57, 116, 194, 369, 804
Bso31I	GGTCTC	1 cut(s)	348
BsoBI	CYCGRG	2 cut(s)	431, 1814
Bsp119I	TTCGAA	1 cut(s)	1677
Bsp1286I	GDGCHC	2 cut(s)	741, 762
Bsp143I	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
Bsp1720I	GCTNAGC	1 cut(s)	35
BspANI	GGCC	5 cut(s)	57, 116, 194, 369, 804
BspCNI	CTCAG	6 cut(s)	48, 667, 724, 1169, 1324, 1689
BspLI	GGNNCC	3 cut(s)	100, 370, 805
BspPI	GGATC	3 cut(s)	417, 1536, 1643
BspT104I	TTCGAA	1 cut(s)	1677
BspTNI	GGTCTC	1 cut(s)	348
BsrDI	GCAATG	2 cut(s)	112, 486
BsrI	ACTGG	3 cut(s)	304, 1363, 1756
BssECI	CCNNGG	2 cut(s)	381, 1814
BssMI	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
Bst2UI	CCWGG	2 cut(s)	717, 1733
Bst4CI	ACNGT	4 cut(s)	326, 943, 1056, 1500
Bst6I	CTCTTC	2 cut(s)	248, 587
BstBI	TTCGAA	1 cut(s)	1677
BstC8I	GCNNGC	2 cut(s)	196, 1299
BstDEI	CTNAG	8 cut(s)	35, 675, 732, 742, 882, 1156, 1311, 1697
BstF5I	GGATG	1 cut(s)	1824
BstH2I	RGCGCY	1 cut(s)	159
BstHHI	GCGC	2 cut(s)	158, 297
BstKTI	GATC	6 cut(s)	412, 507, 1459, 1510, 1544, 1651
BstMAI	GTCTC	2 cut(s)	348, 863
BstMBI	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
BstMCI	CGRYCG	1 cut(s)	133
BstMWI	GCNNNNNNNGC	8 cut(s)	153, 179, 303, 611, 757, 1272, 1307, 1490
BstNI	CCWGG	2 cut(s)	717, 1733
BstNSI	RCATGY	1 cut(s)	289
BstSCI	CCNGG	5 cut(s)	381, 715, 1731, 1813, 1814
BstSFI	CTRYAG	2 cut(s)	268, 1283
BstV1I	GCAGC	6 cut(s)	18, 165, 623, 1156, 1374, 1493
BstV2I	GAAGAC	1 cut(s)	1431
BstX2I	RGATCY	1 cut(s)	1648
BstYI	RGATCY	1 cut(s)	1648
BsuI	GTATCC	2 cut(s)	1068, 1396
BsuRI	GGCC	5 cut(s)	57, 116, 194, 369, 804
BtgZI	GCGATG	2 cut(s)	154, 1617
BtsCI	GGATG	1 cut(s)	1824
BtsI	GCAGTG	1 cut(s)	901
BtsIMutI	CAGTG	3 cut(s)	297, 901, 1693
Cac8I	GCNNGC	2 cut(s)	196, 1299
CaiI	CAGNNNCTG	1 cut(s)	31
CfoI	GCGC	2 cut(s)	158, 297
Cfr13I	GGNCC	6 cut(s)	55, 193, 368, 803, 1667, 1729
Cfr9I	CCCGGG	1 cut(s)	1814
Csp6I	GTAC	4 cut(s)	493, 547, 783, 886
CviAII	CATG	7 cut(s)	112, 202, 280, 286, 932, 1025, 1070
CviQI	GTAC	4 cut(s)	493, 547, 783, 886
DdeI	CTNAG	8 cut(s)	35, 675, 732, 742, 882, 1156, 1311, 1697
DpnI	GATC	6 cut(s)	411, 506, 1458, 1509, 1543, 1650
DpnII	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
DraI	TTTAAA	2 cut(s)	1194, 1581
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	2 cut(s)	248, 587
EarI	CTCTTC	2 cut(s)	248, 587
Ecl136II	GAGCTC	1 cut(s)	739
Eco24I	GRGCYC	1 cut(s)	741
Eco31I	GGTCTC	1 cut(s)	348
Eco32I	GATATC	2 cut(s)	982, 1591
Eco47I	GGWCC	2 cut(s)	1667, 1729
Eco53kI	GAGCTC	1 cut(s)	739
Eco57I	CTGAAG	2 cut(s)	1037, 1860
Eco88I	CYCGRG	2 cut(s)	431, 1814
EcoICRI	GAGCTC	1 cut(s)	739
EcoO109I	RGGNCCY	1 cut(s)	1667
EcoRI	GAATTC	1 cut(s)	1673
EcoRII	CCWGG	2 cut(s)	715, 1731
EcoRV	GATATC	2 cut(s)	982, 1591
EcoT38I	GRGCYC	1 cut(s)	741
FaeI	CATG	7 cut(s)	115, 205, 283, 289, 935, 1028, 1073
FalI	AAGNNNNNCTT	4 cut(s)	182, 214, 347, 379
FaqI	GGGAC	3 cut(s)	242, 312, 637
FatI	CATG	7 cut(s)	111, 201, 279, 285, 931, 1024, 1069
FauI	CCCGC	3 cut(s)	110, 203, 529
FbaI	TGATCA	1 cut(s)	1456
FokI	GGATG	1 cut(s)	1831
FriOI	GRGCYC	1 cut(s)	741
FspBI	CTAG	2 cut(s)	1616, 1632
GlaI	GCGC	2 cut(s)	157, 296
GsaI	CCCAGC	2 cut(s)	187, 379
GsuI	CTGGAG	1 cut(s)	569
HaeII	RGCGCY	1 cut(s)	159
HaeIII	GGCC	5 cut(s)	57, 116, 194, 369, 804
HapII	CCGG	2 cut(s)	383, 1815
HhaI	GCGC	2 cut(s)	158, 297
Hin1II	CATG	7 cut(s)	115, 205, 283, 289, 935, 1028, 1073
Hin6I	GCGC	2 cut(s)	156, 295
HinP1I	GCGC	2 cut(s)	156, 295
HincII	GTYRAC	3 cut(s)	211, 837, 1153
HindII	GTYRAC	3 cut(s)	211, 837, 1153
HindIII	AAGCTT	1 cut(s)	749
HpaI	GTTAAC	1 cut(s)	1153
HpaII	CCGG	2 cut(s)	383, 1815
HphI	GGTGA	6 cut(s)	82, 436, 499, 1055, 1759, 1766
Hpy166II	GTNNAC	5 cut(s)	90, 211, 547, 837, 1153
Hpy188I	TCNGA	9 cut(s)	130, 516, 1159, 1258, 1314, 1567, 1588, 1623, 1879
Hpy8I	GTNNAC	5 cut(s)	90, 211, 547, 837, 1153
HpyAV	CCTTC	5 cut(s)	184, 1071, 1154, 1738, 1884
HpyCH4III	ACNGT	4 cut(s)	326, 943, 1056, 1500
HpyCH4IV	ACGT	3 cut(s)	575, 1164, 1758
HpyCH4V	TGCA	7 cut(s)	448, 558, 611, 894, 1412, 1471, 1808
HpyF10VI	GCNNNNNNNGC	8 cut(s)	153, 179, 303, 611, 757, 1272, 1307, 1490
HpyF3I	CTNAG	8 cut(s)	35, 675, 732, 742, 882, 1156, 1311, 1697
HpySE526I	ACGT	3 cut(s)	575, 1164, 1758
Hsp92II	CATG	7 cut(s)	115, 205, 283, 289, 935, 1028, 1073
HspAI	GCGC	2 cut(s)	156, 295
Ksp22I	TGATCA	1 cut(s)	1456
KspAI	GTTAAC	1 cut(s)	1153
Kzo9I	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
LmnI	GCTCC	5 cut(s)	736, 773, 912, 1073, 1769
Lsp1109I	GCAGC	6 cut(s)	18, 165, 623, 1156, 1374, 1493
LweI	GCATC	2 cut(s)	881, 1399
MaeI	CTAG	2 cut(s)	1616, 1632
MaeII	ACGT	3 cut(s)	575, 1164, 1758
MaeIII	GTNAC	7 cut(s)	702, 1020, 1234, 1688, 1747, 1754, 1795
MalI	GATC	6 cut(s)	411, 506, 1458, 1509, 1543, 1650
MboI	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
MfeI	CAATTG	2 cut(s)	456, 1176
MflI	RGATCY	1 cut(s)	1648
MhlI	GDGCHC	2 cut(s)	741, 762
MlsI	TGGCCA	1 cut(s)	116
MluNI	TGGCCA	1 cut(s)	116
MlyI	GAGTC	3 cut(s)	119, 524, 865
MmeI	TCCRAC	1 cut(s)	153
Mox20I	TGGCCA	1 cut(s)	116
MroXI	GAANNNNTTC	1 cut(s)	418
MscI	TGGCCA	1 cut(s)	116
MseI	TTAA	9 cut(s)	851, 858, 993, 1152, 1193, 1323, 1389, 1580, 1707
MslI	CAYNNNNRTG	1 cut(s)	284
Msp20I	TGGCCA	1 cut(s)	116
MspA1I	CMGCKG	3 cut(s)	614, 1015, 1484
MspI	CCGG	2 cut(s)	383, 1815
MspR9I	CCNGG	5 cut(s)	383, 717, 1733, 1815, 1816
MunI	CAATTG	2 cut(s)	456, 1176
MvaI	CCWGG	2 cut(s)	717, 1733
MwoI	GCNNNNNNNGC	8 cut(s)	153, 179, 303, 611, 757, 1272, 1307, 1490
NciI	CCSGG	3 cut(s)	383, 1815, 1816
NdeII	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
NlaIII	CATG	7 cut(s)	115, 205, 283, 289, 935, 1028, 1073
NlaIV	GGNNCC	3 cut(s)	100, 370, 805
NmeAIII	GCCGAG	1 cut(s)	187
NmuCI	GTSAC	5 cut(s)	1020, 1234, 1688, 1747, 1754
NspI	RCATGY	1 cut(s)	289
NspV	TTCGAA	1 cut(s)	1677
PaeR7I	CTCGAG	1 cut(s)	431
PcsI	WCGNNNNNNNCGW	1 cut(s)	237
PdmI	GAANNNNTTC	1 cut(s)	418
PfeI	GAWTC	6 cut(s)	427, 451, 473, 517, 795, 1253
PleI	GAGTC	3 cut(s)	119, 524, 865
PpsI	GAGTC	3 cut(s)	119, 524, 865
PpuMI	RGGWCCY	1 cut(s)	1667
Psp124BI	GAGCTC	1 cut(s)	741
Psp5II	RGGWCCY	1 cut(s)	1667
Psp6I	CCWGG	2 cut(s)	715, 1731
PspFI	CCCAGC	2 cut(s)	183, 375
PspGI	CCWGG	2 cut(s)	715, 1731
PspN4I	GGNNCC	3 cut(s)	100, 370, 805
PspPI	GGNCC	6 cut(s)	55, 193, 368, 803, 1667, 1729
PspPPI	RGGWCCY	1 cut(s)	1667
PstNI	CAGNNNCTG	1 cut(s)	31
PsuI	RGATCY	1 cut(s)	1648
PvuII	CAGCTG	2 cut(s)	1015, 1484
RsaI	GTAC	4 cut(s)	494, 548, 784, 887
RsaNI	GTAC	4 cut(s)	493, 547, 783, 886
RseI	CAYNNNNRTG	1 cut(s)	284
SacI	GAGCTC	1 cut(s)	741
SaqAI	TTAA	9 cut(s)	851, 858, 993, 1152, 1193, 1323, 1389, 1580, 1707
Sau3AI	GATC	6 cut(s)	409, 504, 1456, 1507, 1541, 1648
Sau96I	GGNCC	6 cut(s)	55, 193, 368, 803, 1667, 1729
ScaI	AGTACT	1 cut(s)	494
SchI	GAGTC	3 cut(s)	119, 524, 865
ScrFI	CCNGG	5 cut(s)	383, 717, 1733, 1815, 1816
SduI	GDGCHC	2 cut(s)	741, 762
SfaNI	GCATC	2 cut(s)	881, 1399
SfcI	CTRYAG	2 cut(s)	268, 1283
Sfr274I	CTCGAG	1 cut(s)	431
SfuI	TTCGAA	1 cut(s)	1677
SinI	GGWCC	2 cut(s)	1667, 1729
SlaI	CTCGAG	1 cut(s)	431
SmaI	CCCGGG	1 cut(s)	1816
SmiMI	CAYNNNNRTG	1 cut(s)	284
SmlI	CTYRAG	3 cut(s)	431, 761, 1784
SmoI	CTYRAG	3 cut(s)	431, 761, 1784
SspI	AATATT	2 cut(s)	962, 1223
SspMI	CTAG	2 cut(s)	1616, 1632
SstI	GAGCTC	1 cut(s)	741
StyD4I	CCNGG	5 cut(s)	381, 715, 1731, 1813, 1814
TaaI	ACNGT	4 cut(s)	326, 943, 1056, 1500
TaiI	ACGT	3 cut(s)	578, 1167, 1761
TaqI	TCGA	8 cut(s)	123, 240, 412, 432, 471, 798, 1540, 1677
TaqII	GACCGA	1 cut(s)	1016
TatI	WGTACW	3 cut(s)	492, 546, 885
TauI	GCSGC	5 cut(s)	60, 71, 161, 176, 306
TfiI	GAWTC	6 cut(s)	427, 451, 473, 517, 795, 1253
Tru1I	TTAA	9 cut(s)	851, 858, 993, 1152, 1193, 1323, 1389, 1580, 1707
Tru9I	TTAA	9 cut(s)	851, 858, 993, 1152, 1193, 1323, 1389, 1580, 1707
TscAI	CASTG	3 cut(s)	304, 901, 1693
TseFI	GTSAC	5 cut(s)	1020, 1234, 1688, 1747, 1754
TseI	GCWGC	6 cut(s)	31, 153, 611, 1169, 1362, 1481
Tsp45I	GTSAC	5 cut(s)	1020, 1234, 1688, 1747, 1754
TspDTI	ATGAA	8 cut(s)	157, 190, 296, 929, 948, 1065, 1585, 1835
TspGWI	ACGGA	6 cut(s)	111, 422, 815, 866, 1463, 1854
TspMI	CCCGGG	1 cut(s)	1814
TspRI	CASTG	3 cut(s)	304, 901, 1693
VpaK11BI	GGWCC	2 cut(s)	1667, 1729
XapI	RAATTY	4 cut(s)	1188, 1340, 1673, 1830
XceI	RCATGY	1 cut(s)	289
XcmI	CCANNNNNNNNNTGG	1 cut(s)	49
XhoI	CTCGAG	1 cut(s)	431
XmaI	CCCGGG	1 cut(s)	1814
XmnI	GAANNNNTTC	1 cut(s)	418
XspI	CTAG	2 cut(s)	1616, 1632
ZrmI	AGTACT	1 cut(s)	494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.