Rmu_sc0012351.1_g000004

UTP--glucose-1-phosphate uridylyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012351.1
Physical Location & Seq
Reverse (-)
24326 .. 25693
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012351.1_g000004.1.cds

Sequence Viewer

Length: 819 bp
atggtccttacgatgaagtcaactattataagttttgttaggaaatggacgtggcatcgtcctgatatcatcctgatggttcagttaagaataagtaggcggacgacagggagcaacggaggactgccggagaagaccaaagataggcacgcgacggtagagatcaagacgtcgtcacctggatctaaagccatcgtcgcgtatcacggtcaaatcttttgcgccggtttgaattggtaccagtcaccggaggcgccattgctatcgaggatgcggagcttgccggcgagtttggggaaggggttggtcggatctgacggcaatctcgaacggcagactcgatatgaggccaccgtcgccggagttttccacatgtggaccaattacgacattcaattttggtcaccgtctccctccatgaacactctctggcgcaccggcagcttcctcaccaatagtcacagccctaagaagttcaggtctcgtcggaagaagatcgtcttcggaccgactcagccgccggactgcctcttggttttcgactccgagaggaagtcatcggtgattctcgaggcgcataggttgcaggttccgattgtttcgcttgtggactcggacatgcctatcgagtactacaacaagatcacgtatccgattccgtgtaattcctcggtgcaatttgtgtacctgttctgcaatttgatcaccaagacgttcatgcttcagcaaaagaaaagcggcaccgattctgccgaaattgagactaggtgtgttggtgtttttggtgcgcaccaggtgtttgatgttttgattgagtga

Protein Analysis

272

Amino Acids

30.81

Weight (kDa)

9.61

Isoelectric Point (pI)

50.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 29
AatII GACGTC 1 cut(s) 173
Acc16I TGCGCA 1 cut(s) 789
Acc36I ACCTGC 1 cut(s) 577
Acc65I GGTACC 1 cut(s) 237
AccB1I GGYRCC 3 cut(s) 237, 253, 740
AccII CGCG 2 cut(s) 152, 200
AciI CCGC 4 cut(s) 100, 274, 518, 738
AclWI GGATC 2 cut(s) 190, 319
AcuI CTGAAG 1 cut(s) 707
AcyI GRCGYC 2 cut(s) 170, 254
AdeI CACNNNGTG 1 cut(s) 796
AfaI GTAC 3 cut(s) 239, 632, 686
AfiI CCNNNNNNNGG 2 cut(s) 144, 247
AflIII ACRYGT 1 cut(s) 372
AgsI TTSAA 2 cut(s) 232, 395
AjiI CACGTC 1 cut(s) 51
AjnI CCWGG 2 cut(s) 178, 792
AluBI AGCT 2 cut(s) 279, 444
AluI AGCT 2 cut(s) 279, 444
Alw26I GTCTC 3 cut(s) 414, 486, 755
AlwI GGATC 2 cut(s) 190, 319
Ama87I CYCGRG 1 cut(s) 569
AoxI GGCC 1 cut(s) 348
ApeKI GCWGC 1 cut(s) 441
Asp718I GGTACC 1 cut(s) 237
AspLEI GCGC 5 cut(s) 224, 256, 435, 577, 790
AspS9I GGNCC 3 cut(s) 4, 378, 506
AsuHPI GGTGA 6 cut(s) 168, 237, 396, 442, 574, 697
AvaI CYCGRG 1 cut(s) 569
AvaII GGWCC 3 cut(s) 4, 378, 506
BanI GGYRCC 3 cut(s) 237, 253, 740
BbsI GAAGAC 2 cut(s) 140, 493
BbvI GCAGC 1 cut(s) 453
BccI CCATC 2 cut(s) 70, 200
BceAI ACGGC 2 cut(s) 334, 347
BciT130I CCWGG 2 cut(s) 180, 794
BciVI GTATCC 1 cut(s) 660
BclI TGATCA 1 cut(s) 702
BcoDI GTCTC 3 cut(s) 414, 486, 755
BfaI CTAG 1 cut(s) 765
BfoI RGCGCY 1 cut(s) 257
BfuAI ACCTGC 1 cut(s) 577
BfuI GTATCC 1 cut(s) 660
BisI GCNGC 3 cut(s) 442, 518, 739
BlsI GCNGC 3 cut(s) 443, 519, 740
BmcAI AGTACT 1 cut(s) 632
Bme1390I CCNGG 2 cut(s) 180, 794
Bme18I GGWCC 3 cut(s) 4, 378, 506
BmeT110I CYCGRG 1 cut(s) 569
BmgBI CACGTC 1 cut(s) 51
BmgT120I GGNCC 3 cut(s) 4, 378, 506
BmiI GGNNCC 4 cut(s) 239, 255, 591, 742
BmrFI CCNGG 2 cut(s) 180, 794
BmsI GCATC 2 cut(s) 64, 261
BpiI GAAGAC 2 cut(s) 140, 493
BsaAI YACGTR 1 cut(s) 648
BsaHI GRCGYC 2 cut(s) 170, 254
BsaI GGTCTC 1 cut(s) 486
BsaJI CCNNGG 1 cut(s) 669
BsaWI WCCGGW 1 cut(s) 247
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 247
Bse118I RCCGGY 3 cut(s) 224, 283, 437
Bse1I ACTGG 1 cut(s) 241
Bse3DI GCAATG 1 cut(s) 257
BseBI CCWGG 2 cut(s) 180, 794
BseDI CCNNGG 1 cut(s) 669
BseGI GGATG 2 cut(s) 69, 276
BseLI CCNNNNNNNGG 2 cut(s) 144, 247
BseMI GCAATG 1 cut(s) 257
BseMII CTCAG 1 cut(s) 527
BseNI ACTGG 1 cut(s) 241
BseXI GCAGC 1 cut(s) 453
Bsh1236I CGCG 2 cut(s) 152, 200
BshFI GGCC 1 cut(s) 350
BshNI GGYRCC 3 cut(s) 237, 253, 740
BsiHKCI CYCGRG 1 cut(s) 569
BsiSI CCGG 7 cut(s) 128, 225, 248, 284, 360, 438, 521
BslI CCNNNNNNNGG 2 cut(s) 144, 247
BsmAI GTCTC 3 cut(s) 414, 486, 755
BsmBI CGTCTC 1 cut(s) 414
BsnI GGCC 1 cut(s) 350
Bso31I GGTCTC 1 cut(s) 486
BsoBI CYCGRG 1 cut(s) 569
Bsp143I GATC 6 cut(s) 162, 182, 311, 495, 642, 702
BspACI CCGC 4 cut(s) 100, 274, 518, 738
BspANI GGCC 1 cut(s) 350
BspCNI CTCAG 1 cut(s) 526
BspFNI CGCG 2 cut(s) 152, 200
BspLI GGNNCC 4 cut(s) 239, 255, 591, 742
BspMI ACCTGC 1 cut(s) 577
BspPI GGATC 2 cut(s) 190, 319
BspT107I GGYRCC 3 cut(s) 237, 253, 740
BspTNI GGTCTC 1 cut(s) 486
BsrDI GCAATG 1 cut(s) 257
BsrFI RCCGGY 3 cut(s) 224, 283, 437
BsrI ACTGG 1 cut(s) 241
BssAI RCCGGY 3 cut(s) 224, 283, 437
BssECI CCNNGG 1 cut(s) 669
BssMI GATC 6 cut(s) 162, 182, 311, 495, 642, 702
BssNI GRCGYC 2 cut(s) 170, 254
Bst2UI CCWGG 2 cut(s) 180, 794
Bst4CI ACNGT 4 cut(s) 157, 209, 355, 408
BstACI GRCGYC 2 cut(s) 170, 254
BstAPI GCANNNNNTGC 1 cut(s) 583
BstBAI YACGTR 1 cut(s) 648
BstC8I GCNNGC 3 cut(s) 150, 281, 285
BstDEI CTNAG 2 cut(s) 468, 513
BstEII GGTNACC 1 cut(s) 402
BstF5I GGATG 2 cut(s) 69, 276
BstFNI CGCG 2 cut(s) 152, 200
BstH2I RGCGCY 1 cut(s) 257
BstHHI GCGC 5 cut(s) 224, 256, 435, 577, 790
BstKTI GATC 6 cut(s) 165, 185, 314, 498, 645, 705
BstMAI GTCTC 3 cut(s) 414, 486, 755
BstMBI GATC 6 cut(s) 162, 182, 311, 495, 642, 702
BstMWI GCNNNNNNNGC 5 cut(s) 197, 280, 356, 441, 583
BstNI CCWGG 2 cut(s) 180, 794
BstNSI RCATGY 2 cut(s) 376, 622
BstPI GGTNACC 1 cut(s) 402
BstSCI CCNGG 2 cut(s) 178, 792
BstUI CGCG 2 cut(s) 152, 200
BstV1I GCAGC 1 cut(s) 453
BstV2I GAAGAC 2 cut(s) 140, 493
BstX2I RGATCY 2 cut(s) 182, 311
BstYI RGATCY 2 cut(s) 182, 311
BsuI GTATCC 1 cut(s) 660
BsuRI GGCC 1 cut(s) 350
BtrI CACGTC 1 cut(s) 51
BtsCI GGATG 2 cut(s) 69, 276
BveI ACCTGC 1 cut(s) 577
Cac8I GCNNGC 3 cut(s) 150, 281, 285
CfoI GCGC 5 cut(s) 224, 256, 435, 577, 790
Cfr10I RCCGGY 3 cut(s) 224, 283, 437
Cfr13I GGNCC 3 cut(s) 4, 378, 506
CpoI CGGWCCG 1 cut(s) 506
CsiI ACCWGGT 1 cut(s) 792
Csp6I GTAC 3 cut(s) 238, 631, 685
CspI CGGWCCG 1 cut(s) 506
CviAII CATG 4 cut(s) 373, 418, 619, 718
CviJI RGCY 6 cut(s) 191, 279, 350, 444, 465, 517
CviKI_1 RGCY 6 cut(s) 191, 279, 350, 444, 465, 517
CviQI GTAC 3 cut(s) 238, 631, 685
DdeI CTNAG 2 cut(s) 468, 513
DinI GGCGCC 1 cut(s) 255
DpnI GATC 6 cut(s) 164, 184, 313, 497, 644, 704
DpnII GATC 6 cut(s) 162, 182, 311, 495, 642, 702
DraIII CACNNNGTG 1 cut(s) 796
EciI GGCGGA 1 cut(s) 115
Eco31I GGTCTC 1 cut(s) 486
Eco32I GATATC 1 cut(s) 67
Eco47I GGWCC 3 cut(s) 4, 378, 506
Eco57I CTGAAG 1 cut(s) 707
Eco88I CYCGRG 1 cut(s) 569
Eco91I GGTNACC 1 cut(s) 402
EcoO65I GGTNACC 1 cut(s) 402
EcoRII CCWGG 2 cut(s) 178, 792
EcoRV GATATC 1 cut(s) 67
EgeI GGCGCC 1 cut(s) 255
EheI GGCGCC 1 cut(s) 255
Esp3I CGTCTC 1 cut(s) 414
FaeI CATG 4 cut(s) 376, 421, 622, 721
FaiI YATR 7 cut(s) 29, 345, 374, 419, 579, 620, 719
FalI AAGNNNNNCTT 2 cut(s) 485, 517
FatI CATG 4 cut(s) 372, 417, 618, 717
FbaI TGATCA 1 cut(s) 702
Fnu4HI GCNGC 3 cut(s) 442, 518, 739
FokI GGATG 2 cut(s) 56, 283
Fsp4HI GCNGC 3 cut(s) 442, 518, 739
FspAI RTGCGCAY 1 cut(s) 789
FspBI CTAG 1 cut(s) 765
FspI TGCGCA 1 cut(s) 789
GlaI GCGC 5 cut(s) 223, 255, 434, 576, 789
GluI GCNGC 3 cut(s) 442, 518, 739
HaeII RGCGCY 1 cut(s) 257
HaeIII GGCC 1 cut(s) 350
HapII CCGG 7 cut(s) 128, 225, 248, 284, 360, 438, 521
HhaI GCGC 5 cut(s) 224, 256, 435, 577, 790
Hin1I GRCGYC 2 cut(s) 170, 254
Hin1II CATG 4 cut(s) 376, 421, 622, 721
Hin6I GCGC 5 cut(s) 222, 254, 433, 575, 788
HinP1I GCGC 5 cut(s) 222, 254, 433, 575, 788
HincII GTYRAC 1 cut(s) 21
HindII GTYRAC 1 cut(s) 21
HinfI GANTC 7 cut(s) 337, 511, 542, 565, 611, 655, 746
HpaII CCGG 7 cut(s) 128, 225, 248, 284, 360, 438, 521
HphI GGTGA 6 cut(s) 168, 237, 396, 442, 574, 697
Hpy166II GTNNAC 4 cut(s) 21, 378, 610, 685
Hpy188I TCNGA 8 cut(s) 311, 316, 489, 506, 547, 594, 616, 654
Hpy188III TCNNGA 5 cut(s) 62, 73, 166, 326, 569
Hpy8I GTNNAC 4 cut(s) 21, 378, 610, 685
Hpy99I CGWCG 5 cut(s) 157, 175, 200, 359, 489
HpyAV CCTTC 1 cut(s) 292
HpyCH4III ACNGT 4 cut(s) 157, 209, 355, 408
HpyCH4IV ACGT 4 cut(s) 50, 170, 647, 713
HpyCH4V TGCA 3 cut(s) 586, 676, 696
HpyF10VI GCNNNNNNNGC 5 cut(s) 197, 280, 356, 441, 583
HpyF3I CTNAG 2 cut(s) 468, 513
HpySE526I ACGT 4 cut(s) 50, 170, 647, 713
Hsp92I GRCGYC 2 cut(s) 170, 254
Hsp92II CATG 4 cut(s) 376, 421, 622, 721
HspAI GCGC 5 cut(s) 222, 254, 433, 575, 788
KasI GGCGCC 1 cut(s) 253
KpnI GGTACC 1 cut(s) 241
KroI GCCGGC 1 cut(s) 283
KroNI GCCGGC 1 cut(s) 285
Ksp22I TGATCA 1 cut(s) 702
Kzo9I GATC 6 cut(s) 162, 182, 311, 495, 642, 702
LmnI GCTCC 2 cut(s) 111, 276
Lsp1109I GCAGC 1 cut(s) 453
LweI GCATC 2 cut(s) 64, 261
MabI ACCWGGT 1 cut(s) 792
MaeI CTAG 1 cut(s) 765
MaeII ACGT 4 cut(s) 50, 170, 647, 713
MaeIII GTNAC 4 cut(s) 174, 243, 402, 458
MalI GATC 6 cut(s) 164, 184, 313, 497, 644, 704
MboI GATC 6 cut(s) 162, 182, 311, 495, 642, 702
MboII GAAGA 4 cut(s) 145, 493, 502, 505
MflI RGATCY 2 cut(s) 182, 311
MluCI AATT 7 cut(s) 232, 382, 395, 664, 677, 697, 756
Mly113I GGCGCC 1 cut(s) 254
MlyI GAGTC 4 cut(s) 331, 505, 536, 605
MmeI TCCRAC 2 cut(s) 289, 467
MroNI GCCGGC 1 cut(s) 283
MseI TTAA 1 cut(s) 86
MslI CAYNNNNRTG 1 cut(s) 74
MspI CCGG 7 cut(s) 128, 225, 248, 284, 360, 438, 521
MspR9I CCNGG 2 cut(s) 180, 794
MvaI CCWGG 2 cut(s) 180, 794
MvnI CGCG 2 cut(s) 152, 200
MwoI GCNNNNNNNGC 5 cut(s) 197, 280, 356, 441, 583
NaeI GCCGGC 1 cut(s) 285
NarI GGCGCC 1 cut(s) 254
NdeII GATC 6 cut(s) 162, 182, 311, 495, 642, 702
NgoMIV GCCGGC 1 cut(s) 283
NlaIII CATG 4 cut(s) 376, 421, 622, 721
NlaIV GGNNCC 4 cut(s) 239, 255, 591, 742
NmuCI GTSAC 4 cut(s) 174, 243, 402, 458
NsbI TGCGCA 1 cut(s) 789
NspI RCATGY 2 cut(s) 376, 622
PaeR7I CTCGAG 1 cut(s) 569
PciI ACATGT 1 cut(s) 372
PcsI WCGNNNNNNNCGW 2 cut(s) 324, 337
PdiI GCCGGC 1 cut(s) 285
PfeI GAWTC 3 cut(s) 565, 655, 746
PflFI GACNNNGTC 1 cut(s) 172
PkrI GCNGC 3 cut(s) 443, 519, 740
PleI GAGTC 4 cut(s) 331, 505, 536, 605
PluTI GGCGCC 1 cut(s) 257
PpsI GAGTC 4 cut(s) 331, 505, 536, 605
Ppu21I YACGTR 1 cut(s) 648
PscI ACATGT 1 cut(s) 372
PsiI TTATAA 1 cut(s) 29
Psp6I CCWGG 2 cut(s) 178, 792
PspEI GGTNACC 1 cut(s) 402
PspGI CCWGG 2 cut(s) 178, 792
PspN4I GGNNCC 4 cut(s) 239, 255, 591, 742
PspPI GGNCC 3 cut(s) 4, 378, 506
PsuI RGATCY 2 cut(s) 182, 311
PsyI GACNNNGTC 1 cut(s) 172
RsaI GTAC 3 cut(s) 239, 632, 686
RsaNI GTAC 3 cut(s) 238, 631, 685
RseI CAYNNNNRTG 1 cut(s) 74
Rsr2I CGGWCCG 1 cut(s) 506
RsrII CGGWCCG 1 cut(s) 506
SaqAI TTAA 1 cut(s) 86
SatI GCNGC 3 cut(s) 442, 518, 739
Sau3AI GATC 6 cut(s) 162, 182, 311, 495, 642, 702
Sau96I GGNCC 3 cut(s) 4, 378, 506
ScaI AGTACT 1 cut(s) 632
SchI GAGTC 4 cut(s) 331, 505, 536, 605
ScrFI CCNGG 2 cut(s) 180, 794
SexAI ACCWGGT 1 cut(s) 792
SfaNI GCATC 2 cut(s) 64, 261
SfoI GGCGCC 1 cut(s) 255
Sfr274I CTCGAG 1 cut(s) 569
SinI GGWCC 3 cut(s) 4, 378, 506
SlaI CTCGAG 1 cut(s) 569
SmiMI CAYNNNNRTG 1 cut(s) 74
SmlI CTYRAG 1 cut(s) 569
SmoI CTYRAG 1 cut(s) 569
Sse9I AATT 7 cut(s) 232, 382, 395, 664, 677, 697, 756
SsiI CCGC 4 cut(s) 100, 274, 518, 738
SspDI GGCGCC 1 cut(s) 253
SspMI CTAG 1 cut(s) 765
StyD4I CCNGG 2 cut(s) 178, 792
TaaI ACNGT 4 cut(s) 157, 209, 355, 408
TaiI ACGT 4 cut(s) 53, 173, 650, 716
TaqI TCGA 6 cut(s) 266, 327, 340, 540, 570, 627
TaqII GACCGA 1 cut(s) 523
TasI AATT 7 cut(s) 232, 382, 395, 664, 677, 697, 756
TatI WGTACW 1 cut(s) 630
TauI GCSGC 2 cut(s) 520, 741
TfiI GAWTC 3 cut(s) 565, 655, 746
Tru1I TTAA 1 cut(s) 86
Tru9I TTAA 1 cut(s) 86
TseFI GTSAC 4 cut(s) 174, 243, 402, 458
TseI GCWGC 1 cut(s) 441
Tsp45I GTSAC 4 cut(s) 174, 243, 402, 458
TspDTI ATGAA 3 cut(s) 29, 434, 706
TspGWI ACGGA 2 cut(s) 132, 648
Tth111I GACNNNGTC 1 cut(s) 172
VpaK11BI GGWCC 3 cut(s) 4, 378, 506
XceI RCATGY 2 cut(s) 376, 622
XhoI CTCGAG 1 cut(s) 569
XspI CTAG 1 cut(s) 765
ZraI GACGTC 1 cut(s) 171
ZrmI AGTACT 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.