Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0001898

Physical Location & Seq

Genomic Coordinates Forward (+)

34098131 .. 34102778

Gene Structure 4648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG221400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1293 bp

ATGTGGCGGTGGTTCGACCTCAGGCTTGAAGCTCCCAAAGCGATTTCGCTGAAGGAGGCTGTCGGAGCCATGGCTCAAGTAGCCGTAACCGACATAGAGCTCGACGGCAGCCCCCAAAAGGCCAACCTCTGCGTCACTCCGGAGATGGTCGCACTGGTTTCCAAAACCCAGGCTACTGATGCCGTCAGCGTGCTGCTGATGCCGAAACCGTTGATGTCGAGCTTCAAGTGCTACGAAAGCCGGAATCTGCAGTTCAATCTGGAAATCCTCCACCGCCAATTGCAGCTGAACTATCGGCATGCGCTCATTCTTTATGGTGAGGTAGAAAGTAAGGATATGCTTGGCTATGAAGATCCTGATGAACCGGGTGATCATGTGATTTTCTATGAGCTTGAGAATGTTCATGCCACACTGTTCGAAAATGAGGTTCTTTTCCGTGTAGTGAATTACGAGCGTGTCTTCCCAACAGAGCCCTCAAGATGCGAGACTGAGAGTGATCATGGATTTCCGTTTGCGTTGAAGTTTGATATCCAGCACATAAAGGCGCTTCTCAATGCCGCTACTTTGTCAGAGATGATATGGATATGGTCCTCGGATAAGTTCACCTTGCTCAGCTTCCCAATTGATGGCCTGGGTAAACTTTTCTTTGGCCATTACAAGGTCGCCTTCTCCTCCGGCAAGGAGTACAGATCCAAGGTCGAGGCCGAACTCTCTGAGTTCTGCGCTAACATCCTGAGGATTCGTCTGATTTTCATCTCCGCCATGGCCGAGAACAAGGCCCGCTTCATGTTCGTCAACACCAACTCCCTCTGGGACGAAATCGTCGAACAAATGACCAAGAAGATCGGCTGCTACTCTCCCTCCATGAACACTCTCTGGCGCACCGGCGGCTTCCTCACCAATAGTCATAGCCCTAAGAAGTTCAGGTCTCGCCGGAAGAAGATCGTCTTCGGACCGACTCAGCCGCCGGACTGCCTCTTGGTTTTCGACTCCGAGAGGAAGTCGTCGGTGATTCTCGAGGCGCATAGGTTGCAGATTCCGATTGTTTCGCTTGTGGACTTGGACATGCCTATCGCGTACTACAACAAGATCACGTATCCGATTCCGTGTAATTCCTCGGTGCAATTTGTGTACCTGTTCTGCAATTTGATCACCAAGATGTTCATGCTTCAGCAGAAGAAGAGCGGCGCCGTTTCGGCCGAAATTGAGACTAGTGAGCGAGTGGGGGTTATAAAGGAGGCTAAGAGCGCAAAGAAGGATGAGGTGCTTGTGGTTCAATCAATTAAAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000313 GO:0000314 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005761 GO:0005763 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015935 GO:0019538 GO:0031974 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:0098798 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00040 ko00052 ko00500 ko00520 ko01100 ko01130 ko03010 map00040 map00052 map00500 map00520 map01100 map01130 map03010

Pfam Domains

Protein Families

Ribosomal_S2 UDPGP

Protein Analysis

430

Amino Acids

49.05

Weight (kDa)

6.77

Isoelectric Point (pI)

45.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_S2	PF00318	321 - 386	6.9e-09	Ribosomal protein S2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03600
fragaria_vesca	FvH4_7g08140
malus_domestica	MD02G1230600.v1.1
prunus_persica	Prupe.2G107500_v2.0.a1
pyrus_communis	pycom02g19970 pycom07g06540
rosa_chinensis	RchiOBHm_Chr1g0341081 RchiOBHm_Chr1g0363821 RchiOBHm_Chr1g0383121 RchiOBHm_Chr2g0085551 RchiOBHm_Chr3g0481141 RchiOBHm_Chr5g0027611 RchiOBHm_Chr5g0054321 RchiOBHm_Chr6g0246101
rosa_laevigata	RLG00000003952 RLG00000006546 RLG00000013359 RLG00000020654 RLG00000029063
rosa_multiflora	Rmu_sc0000533.1_g000047 Rmu_sc0000821.1_g000002 Rmu_sc0001211.1_g000068 Rmu_sc0002200.1_g000002 Rmu_sc0004332.1_g000001 Rmu_sc0004577.1_g000014 Rmu_sc0008563.1_g000010 Rmu_sc0012351.1_g000004 Rmu_ssc0000190.1_g000008
rosa_roxburghii	Rroxscaffold_1G00011600 Rroxscaffold_4G00311710
rosa_rugosa	Rorug01G0160000.1 Rorug05G0092000
rosa_samantha	Rh1AG174300 Rh1BG142600 Rh1BG221400 Rh1CG162100 Rh1CG365900 Rh1DG174200 Rh1DG248400 Rh1DG383600 Rh3AG240800 Rh5AG444100 Rh5DG194400
rosa_wichuraiana	Rw1G014550 Rw4G015450 Rw5G024540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1232
AasI	GACNNNNNNGTC	1 cut(s)	821
AccB1I	GGYRCC	1 cut(s)	1187
AccB7I	CCANNNNNTGG	1 cut(s)	626
AccBSI	CCGCTC	1 cut(s)	1185
AccII	CGCG	1 cut(s)	1076
AccIII	TCCGGA	1 cut(s)	139
AciI	CCGC	8 cut(s)	7, 274, 558, 759, 781, 888, 965, 1185
AclWI	GGATC	2 cut(s)	347, 684
AcoI	YGGCCR	3 cut(s)	649, 765, 1197
AcuI	CTGAAG	2 cut(s)	71, 1154
AcyI	GRCGYC	1 cut(s)	1188
AfaI	GTAC	3 cut(s)	686, 1079, 1133
AfiI	CCNNNNNNNGG	3 cut(s)	118, 626, 658
AgsI	TTSAA	5 cut(s)	29, 226, 256, 520, 1277
AhlI	ACTAGT	1 cut(s)	1211
AjnI	CCWGG	2 cut(s)	168, 630
AluBI	AGCT	6 cut(s)	32, 100, 222, 286, 391, 615
AluI	AGCT	6 cut(s)	32, 100, 222, 286, 391, 615
Alw21I	GWGCWC	1 cut(s)	102
Alw26I	GTCTC	3 cut(s)	479, 933, 1202
AlwI	GGATC	2 cut(s)	347, 684
Ama87I	CYCGRG	1 cut(s)	1016
Aor13HI	TCCGGA	1 cut(s)	139
AoxI	GGCC	7 cut(s)	120, 628, 649, 702, 765, 777, 1197
ApeKI	GCWGC	4 cut(s)	108, 193, 283, 849
AspLEI	GCGC	7 cut(s)	304, 547, 725, 882, 1024, 1190, 1250
AspS9I	GGNCC	3 cut(s)	588, 778, 953
AsuC2I	CCSGG	1 cut(s)	366
AsuHPI	GGTGA	6 cut(s)	329, 380, 595, 889, 1021, 1144
AsuII	TTCGAA	1 cut(s)	417
AvaI	CYCGRG	1 cut(s)	1016
AvaII	GGWCC	2 cut(s)	588, 953
AxyI	CCTNAGG	2 cut(s)	20, 734
BalI	TGGCCA	1 cut(s)	651
BanI	GGYRCC	1 cut(s)	1187
BanII	GRGCYC	2 cut(s)	102, 474
BbsI	GAAGAC	2 cut(s)	451, 940
Bbv12I	GWGCWC	1 cut(s)	102
BbvI	GCAGC	4 cut(s)	120, 180, 295, 836
BccI	CCATC	2 cut(s)	139, 620
BceAI	ACGGC	4 cut(s)	68, 121, 167, 1175
BciT130I	CCWGG	2 cut(s)	170, 632
BciVI	GTATCC	1 cut(s)	1107
BclI	TGATCA	3 cut(s)	370, 496, 1149
BcnI	CCSGG	1 cut(s)	366
BcoDI	GTCTC	3 cut(s)	479, 933, 1202
BcuI	ACTAGT	1 cut(s)	1211
BfaI	CTAG	1 cut(s)	1212
BfmI	CTRYAG	1 cut(s)	248
BfoI	RGCGCY	2 cut(s)	548, 1191
BfuI	GTATCC	1 cut(s)	1107
BglI	GCCNNNNNGGC	1 cut(s)	1196
BisI	GCNGC	8 cut(s)	109, 194, 284, 558, 850, 889, 965, 1186
BlpI	GCTNAGC	1 cut(s)	611
BlsI	GCNGC	8 cut(s)	110, 195, 285, 559, 851, 890, 966, 1187
Bme1390I	CCNGG	3 cut(s)	170, 366, 632
Bme18I	GGWCC	2 cut(s)	588, 953
BmeT110I	CYCGRG	1 cut(s)	1016
BmgT120I	GGNCC	3 cut(s)	588, 778, 953
BmiI	GGNNCC	2 cut(s)	67, 1189
BmrFI	CCNGG	3 cut(s)	170, 366, 632
BmsI	GCATC	3 cut(s)	169, 189, 470
BpiI	GAAGAC	2 cut(s)	451, 940
Bpu1102I	GCTNAGC	1 cut(s)	611
Bpu14I	TTCGAA	1 cut(s)	417
BpuEI	CTTGAG	3 cut(s)	60, 413, 460
BpuMI	CCSGG	1 cut(s)	366
BsaAI	YACGTR	1 cut(s)	1095
BsaBI	GATNNNNATC	1 cut(s)	752
BsaHI	GRCGYC	1 cut(s)	1188
BsaI	GGTCTC	1 cut(s)	933
BsaJI	CCNNGG	7 cut(s)	69, 168, 591, 631, 693, 762, 1116
BsaWI	WCCGGW	1 cut(s)	139
BsaXI	ACNNNNNCTCC	4 cut(s)	788, 818, 845, 875
Bsc4I	CCNNNNNNNGG	3 cut(s)	118, 626, 658
Bse118I	RCCGGY	1 cut(s)	884
Bse1I	ACTGG	1 cut(s)	159
Bse21I	CCTNAGG	2 cut(s)	20, 734
Bse8I	GATNNNNATC	1 cut(s)	752
BseAI	TCCGGA	1 cut(s)	139
BseBI	CCWGG	2 cut(s)	170, 632
BseDI	CCNNGG	7 cut(s)	69, 168, 591, 631, 693, 762, 1116
BseGI	GGATG	2 cut(s)	729, 1264
BseJI	GATNNNNATC	1 cut(s)	752
BseLI	CCNNNNNNNGG	3 cut(s)	118, 626, 658
BseMII	CTCAG	6 cut(s)	34, 480, 625, 705, 725, 974
BseNI	ACTGG	1 cut(s)	159
BseRI	GAGGAG	1 cut(s)	661
BseX3I	CGGCCG	1 cut(s)	1197
BseXI	GCAGC	4 cut(s)	120, 180, 295, 836
Bsh1236I	CGCG	1 cut(s)	1076
Bsh1285I	CGRYCG	1 cut(s)	1200
BshFI	GGCC	7 cut(s)	122, 630, 651, 704, 767, 779, 1199
BshNI	GGYRCC	1 cut(s)	1187
BsiEI	CGRYCG	1 cut(s)	1200
BsiHKAI	GWGCWC	1 cut(s)	102
BsiHKCI	CYCGRG	1 cut(s)	1016
BsiSI	CCGG	7 cut(s)	140, 241, 365, 675, 885, 934, 968
BslFI	GGGAC	1 cut(s)	827
BslI	CCNNNNNNNGG	3 cut(s)	118, 626, 658
BsmAI	GTCTC	3 cut(s)	479, 933, 1202
BsmFI	GGGAC	1 cut(s)	827
BsnI	GGCC	7 cut(s)	122, 630, 651, 704, 767, 779, 1199
Bso31I	GGTCTC	1 cut(s)	933
BsoBI	CYCGRG	1 cut(s)	1016
Bsp119I	TTCGAA	1 cut(s)	417
Bsp1286I	GDGCHC	2 cut(s)	102, 474
Bsp13I	TCCGGA	1 cut(s)	139
Bsp143I	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
Bsp1720I	GCTNAGC	1 cut(s)	611
Bsp19I	CCATGG	2 cut(s)	69, 762
BspACI	CCGC	8 cut(s)	7, 274, 558, 759, 781, 888, 965, 1185
BspANI	GGCC	7 cut(s)	122, 630, 651, 704, 767, 779, 1199
BspCNI	CTCAG	6 cut(s)	33, 481, 624, 706, 726, 973
BspEI	TCCGGA	1 cut(s)	139
BspFNI	CGCG	1 cut(s)	1076
BspLI	GGNNCC	2 cut(s)	67, 1189
BspMAI	CTGCAG	1 cut(s)	252
BspPI	GGATC	2 cut(s)	347, 684
BspQI	GCTCTTC	1 cut(s)	1175
BspT104I	TTCGAA	1 cut(s)	417
BspT107I	GGYRCC	1 cut(s)	1187
BspTNI	GGTCTC	1 cut(s)	933
BsrBI	CCGCTC	1 cut(s)	1185
BsrFI	RCCGGY	1 cut(s)	884
BsrI	ACTGG	1 cut(s)	159
BssAI	RCCGGY	1 cut(s)	884
BssECI	CCNNGG	7 cut(s)	69, 168, 591, 631, 693, 762, 1116
BssMI	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
BssNI	GRCGYC	1 cut(s)	1188
BssT1I	CCWWGG	3 cut(s)	69, 693, 762
Bst2UI	CCWGG	2 cut(s)	170, 632
Bst4CI	ACNGT	2 cut(s)	210, 414
Bst6I	CTCTTC	1 cut(s)	1175
BstACI	GRCGYC	1 cut(s)	1188
BstAPI	GCANNNNNTGC	1 cut(s)	1030
BstBAI	YACGTR	1 cut(s)	1095
BstBI	TTCGAA	1 cut(s)	417
BstC8I	GCNNGC	3 cut(s)	191, 300, 781
BstDEI	CTNAG	8 cut(s)	20, 489, 611, 714, 734, 915, 960, 1242
BstDSI	CCRYGG	2 cut(s)	69, 762
BstF5I	GGATG	2 cut(s)	729, 1264
BstFNI	CGCG	1 cut(s)	1076
BstH2I	RGCGCY	2 cut(s)	548, 1191
BstHHI	GCGC	7 cut(s)	304, 547, 725, 882, 1024, 1190, 1250
BstKTI	GATC	8 cut(s)	355, 373, 499, 692, 846, 945, 1092, 1152
BstMAI	GTCTC	3 cut(s)	479, 933, 1202
BstMBI	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
BstMCI	CGRYCG	1 cut(s)	1200
BstNI	CCWGG	2 cut(s)	170, 632
BstNSI	RCATGY	2 cut(s)	302, 1069
BstSCI	CCNGG	3 cut(s)	168, 364, 630
BstSFI	CTRYAG	1 cut(s)	248
BstUI	CGCG	1 cut(s)	1076
BstV1I	GCAGC	4 cut(s)	120, 180, 295, 836
BstV2I	GAAGAC	2 cut(s)	451, 940
BstX2I	RGATCY	2 cut(s)	352, 689
BstYI	RGATCY	2 cut(s)	352, 689
BstZI	CGGCCG	1 cut(s)	1197
Bsu36I	CCTNAGG	2 cut(s)	20, 734
BsuI	GTATCC	1 cut(s)	1107
BsuRI	GGCC	7 cut(s)	122, 630, 651, 704, 767, 779, 1199
BtgI	CCRYGG	2 cut(s)	69, 762
BtsCI	GGATG	2 cut(s)	729, 1264
BtsIMutI	CAGTG	2 cut(s)	152, 410
Cac8I	GCNNGC	3 cut(s)	191, 300, 781
CfoI	GCGC	7 cut(s)	304, 547, 725, 882, 1024, 1190, 1250
Cfr10I	RCCGGY	1 cut(s)	884
Cfr13I	GGNCC	3 cut(s)	588, 778, 953
CpoI	CGGWCCG	1 cut(s)	953
CseI	GACGC	1 cut(s)	121
Csp6I	GTAC	3 cut(s)	685, 1078, 1132
CspI	CGGWCCG	1 cut(s)	953
CviQI	GTAC	3 cut(s)	685, 1078, 1132
DdeI	CTNAG	8 cut(s)	20, 489, 611, 714, 734, 915, 960, 1242
DinI	GGCGCC	1 cut(s)	1189
DpnI	GATC	8 cut(s)	354, 372, 498, 691, 845, 944, 1091, 1151
DpnII	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
DrdI	GACNNNNNNGTC	1 cut(s)	821
DseDI	GACNNNNNNGTC	1 cut(s)	821
EaeI	YGGCCR	3 cut(s)	649, 765, 1197
EagI	CGGCCG	1 cut(s)	1197
Eam1104I	CTCTTC	1 cut(s)	1175
EarI	CTCTTC	1 cut(s)	1175
EciI	GGCGGA	1 cut(s)	748
Ecl136II	GAGCTC	1 cut(s)	100
EclXI	CGGCCG	1 cut(s)	1197
Eco130I	CCWWGG	3 cut(s)	69, 693, 762
Eco24I	GRGCYC	2 cut(s)	102, 474
Eco31I	GGTCTC	1 cut(s)	933
Eco32I	GATATC	1 cut(s)	529
Eco47I	GGWCC	2 cut(s)	588, 953
Eco52I	CGGCCG	1 cut(s)	1197
Eco53kI	GAGCTC	1 cut(s)	100
Eco57I	CTGAAG	2 cut(s)	71, 1154
Eco81I	CCTNAGG	2 cut(s)	20, 734
Eco88I	CYCGRG	1 cut(s)	1016
EcoICRI	GAGCTC	1 cut(s)	100
EcoRII	CCWGG	2 cut(s)	168, 630
EcoRV	GATATC	1 cut(s)	529
EcoT14I	CCWWGG	3 cut(s)	69, 693, 762
EcoT38I	GRGCYC	2 cut(s)	102, 474
EgeI	GGCGCC	1 cut(s)	1189
EheI	GGCGCC	1 cut(s)	1189
ErhI	CCWWGG	3 cut(s)	69, 693, 762
FalI	AAGNNNNNCTT	8 cut(s)	590, 622, 650, 682, 767, 799, 932, 964
FaqI	GGGAC	1 cut(s)	827
FauI	CCCGC	1 cut(s)	788
FbaI	TGATCA	3 cut(s)	370, 496, 1149
Fnu4HI	GCNGC	8 cut(s)	109, 194, 284, 558, 850, 889, 965, 1186
FokI	GGATG	2 cut(s)	716, 1271
FriOI	GRGCYC	2 cut(s)	102, 474
Fsp4HI	GCNGC	8 cut(s)	109, 194, 284, 558, 850, 889, 965, 1186
FspBI	CTAG	1 cut(s)	1212
GlaI	GCGC	7 cut(s)	303, 546, 724, 881, 1023, 1189, 1249
GluI	GCNGC	8 cut(s)	109, 194, 284, 558, 850, 889, 965, 1186
HaeII	RGCGCY	2 cut(s)	548, 1191
HaeIII	GGCC	7 cut(s)	122, 630, 651, 704, 767, 779, 1199
HapII	CCGG	7 cut(s)	140, 241, 365, 675, 885, 934, 968
HgaI	GACGC	1 cut(s)	121
HhaI	GCGC	7 cut(s)	304, 547, 725, 882, 1024, 1190, 1250
Hin1I	GRCGYC	1 cut(s)	1188
Hin6I	GCGC	7 cut(s)	302, 545, 723, 880, 1022, 1188, 1248
HinP1I	GCGC	7 cut(s)	302, 545, 723, 880, 1022, 1188, 1248
HincII	GTYRAC	1 cut(s)	796
HindII	GTYRAC	1 cut(s)	796
HinfI	GANTC	7 cut(s)	244, 739, 958, 989, 1012, 1036, 1102
HpaII	CCGG	7 cut(s)	140, 241, 365, 675, 885, 934, 968
HphI	GGTGA	6 cut(s)	329, 380, 595, 889, 1021, 1144
Hpy166II	GTNNAC	5 cut(s)	603, 638, 796, 1057, 1132
Hpy188I	TCNGA	9 cut(s)	65, 571, 595, 715, 747, 953, 994, 1041, 1101
Hpy188III	TCNNGA	6 cut(s)	140, 260, 356, 477, 733, 1016
Hpy8I	GTNNAC	5 cut(s)	603, 638, 796, 1057, 1132
Hpy99I	CGWCG	3 cut(s)	107, 827, 1009
HpyAV	CCTTC	3 cut(s)	46, 676, 1249
HpyCH4III	ACNGT	2 cut(s)	210, 414
HpyCH4IV	ACGT	1 cut(s)	1094
HpyCH4V	TGCA	5 cut(s)	250, 283, 1033, 1123, 1143
HpyF3I	CTNAG	8 cut(s)	20, 489, 611, 714, 734, 915, 960, 1242
HpySE526I	ACGT	1 cut(s)	1094
Hsp92I	GRCGYC	1 cut(s)	1188
HspAI	GCGC	7 cut(s)	302, 545, 723, 880, 1022, 1188, 1248
KasI	GGCGCC	1 cut(s)	1187
Kpn2I	TCCGGA	1 cut(s)	139
Ksp22I	TGATCA	3 cut(s)	370, 496, 1149
Kzo9I	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
LguI	GCTCTTC	1 cut(s)	1175
LmnI	GCTCC	2 cut(s)	37, 65
Lsp1109I	GCAGC	4 cut(s)	120, 180, 295, 836
LweI	GCATC	3 cut(s)	169, 189, 470
MaeI	CTAG	1 cut(s)	1212
MaeII	ACGT	1 cut(s)	1094
MaeIII	GTNAC	2 cut(s)	85, 133
MalI	GATC	8 cut(s)	354, 372, 498, 691, 845, 944, 1091, 1151
MbiI	CCGCTC	1 cut(s)	1185
MboI	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
MboII	GAAGA	8 cut(s)	362, 451, 853, 940, 949, 952, 1189, 1192
MfeI	CAATTG	2 cut(s)	278, 621
MflI	RGATCY	2 cut(s)	352, 689
MhlI	GDGCHC	2 cut(s)	102, 474
MlsI	TGGCCA	1 cut(s)	651
MluCI	AATT	8 cut(s)	278, 445, 621, 1111, 1124, 1144, 1203, 1281
MluNI	TGGCCA	1 cut(s)	651
Mly113I	GGCGCC	1 cut(s)	1188
MlyI	GAGTC	2 cut(s)	952, 983
MmeI	TCCRAC	1 cut(s)	43
Mox20I	TGGCCA	1 cut(s)	651
MroI	TCCGGA	1 cut(s)	139
MscI	TGGCCA	1 cut(s)	651
MseI	TTAA	1 cut(s)	1284
MslI	CAYNNNNRTG	1 cut(s)	1157
Msp20I	TGGCCA	1 cut(s)	651
MspA1I	CMGCKG	1 cut(s)	286
MspI	CCGG	7 cut(s)	140, 241, 365, 675, 885, 934, 968
MspR9I	CCNGG	3 cut(s)	170, 366, 632
MunI	CAATTG	2 cut(s)	278, 621
MvaI	CCWGG	2 cut(s)	170, 632
MvnI	CGCG	1 cut(s)	1076
NarI	GGCGCC	1 cut(s)	1188
NciI	CCSGG	1 cut(s)	366
NcoI	CCATGG	2 cut(s)	69, 762
NdeII	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
NlaIV	GGNNCC	2 cut(s)	67, 1189
NmeAIII	GCCGAG	1 cut(s)	793
NmuCI	GTSAC	1 cut(s)	133
NspI	RCATGY	2 cut(s)	302, 1069
NspV	TTCGAA	1 cut(s)	417
PaeI	GCATGC	1 cut(s)	302
PaeR7I	CTCGAG	1 cut(s)	1016
PciSI	GCTCTTC	1 cut(s)	1175
PcsI	WCGNNNNNNNCGW	1 cut(s)	822
PfeI	GAWTC	5 cut(s)	244, 739, 1012, 1036, 1102
PflMI	CCANNNNNTGG	1 cut(s)	626
PkrI	GCNGC	8 cut(s)	110, 195, 285, 559, 851, 890, 966, 1187
PleI	GAGTC	2 cut(s)	952, 983
PluTI	GGCGCC	1 cut(s)	1191
PpsI	GAGTC	2 cut(s)	952, 983
Ppu21I	YACGTR	1 cut(s)	1095
PsiI	TTATAA	1 cut(s)	1232
Psp124BI	GAGCTC	1 cut(s)	102
Psp6I	CCWGG	2 cut(s)	168, 630
PspGI	CCWGG	2 cut(s)	168, 630
PspN4I	GGNNCC	2 cut(s)	67, 1189
PspPI	GGNCC	3 cut(s)	588, 778, 953
PstI	CTGCAG	1 cut(s)	252
PsuI	RGATCY	2 cut(s)	352, 689
PvuII	CAGCTG	1 cut(s)	286
RsaI	GTAC	3 cut(s)	686, 1079, 1133
RsaNI	GTAC	3 cut(s)	685, 1078, 1132
RseI	CAYNNNNRTG	1 cut(s)	1157
Rsr2I	CGGWCCG	1 cut(s)	953
RsrII	CGGWCCG	1 cut(s)	953
SacI	GAGCTC	1 cut(s)	102
SapI	GCTCTTC	1 cut(s)	1175
SaqAI	TTAA	1 cut(s)	1284
SatI	GCNGC	8 cut(s)	109, 194, 284, 558, 850, 889, 965, 1186
Sau3AI	GATC	8 cut(s)	352, 370, 496, 689, 843, 942, 1089, 1149
Sau96I	GGNCC	3 cut(s)	588, 778, 953
SchI	GAGTC	2 cut(s)	952, 983
ScrFI	CCNGG	3 cut(s)	170, 366, 632
SduI	GDGCHC	2 cut(s)	102, 474
SfaNI	GCATC	3 cut(s)	169, 189, 470
SfcI	CTRYAG	1 cut(s)	248
SfoI	GGCGCC	1 cut(s)	1189
Sfr274I	CTCGAG	1 cut(s)	1016
SfuI	TTCGAA	1 cut(s)	417
SgrAI	CRCCGGYG	1 cut(s)	884
SinI	GGWCC	2 cut(s)	588, 953
SlaI	CTCGAG	1 cut(s)	1016
SmiMI	CAYNNNNRTG	1 cut(s)	1157
SmlI	CTYRAG	4 cut(s)	75, 392, 475, 1016
SmoI	CTYRAG	4 cut(s)	75, 392, 475, 1016
SpeI	ACTAGT	1 cut(s)	1211
SphI	GCATGC	1 cut(s)	302
Sse9I	AATT	8 cut(s)	278, 445, 621, 1111, 1124, 1144, 1203, 1281
SsiI	CCGC	8 cut(s)	7, 274, 558, 759, 781, 888, 965, 1185
SspDI	GGCGCC	1 cut(s)	1187
SspMI	CTAG	1 cut(s)	1212
SstI	GAGCTC	1 cut(s)	102
StyD4I	CCNGG	3 cut(s)	168, 364, 630
StyI	CCWWGG	3 cut(s)	69, 693, 762
TaaI	ACNGT	2 cut(s)	210, 414
TaiI	ACGT	1 cut(s)	1097
TaqI	TCGA	8 cut(s)	15, 102, 218, 417, 699, 825, 987, 1017
TaqII	GACCGA	1 cut(s)	970
TasI	AATT	8 cut(s)	278, 445, 621, 1111, 1124, 1144, 1203, 1281
TatI	WGTACW	1 cut(s)	684
TauI	GCSGC	4 cut(s)	560, 891, 967, 1188
TfiI	GAWTC	5 cut(s)	244, 739, 1012, 1036, 1102
Tru1I	TTAA	1 cut(s)	1284
Tru9I	TTAA	1 cut(s)	1284
TscAI	CASTG	2 cut(s)	159, 417
TseFI	GTSAC	1 cut(s)	133
TseI	GCWGC	4 cut(s)	108, 193, 283, 849
Tsp45I	GTSAC	1 cut(s)	133
TspDTI	ATGAA	7 cut(s)	363, 375, 392, 742, 775, 881, 1153
TspGWI	ACGGA	3 cut(s)	425, 498, 1095
TspRI	CASTG	2 cut(s)	159, 417
Van91I	CCANNNNNTGG	1 cut(s)	626
VpaK11BI	GGWCC	2 cut(s)	588, 953
XceI	RCATGY	2 cut(s)	302, 1069
XhoI	CTCGAG	1 cut(s)	1016
XspI	CTAG	1 cut(s)	1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.