Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0001898

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG174200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGACGCTCCACTCCATAGTGATCCAGAAGCTTCTGAGCACCAACGCCCATTTGGGCCGCCGCGTCGCGGCCCACCACTTCAAGCAGTTCACCTTCGGCCACCGCAACGGCATGGCCGTCATCGACTCCGATCGGACCCTCATCTGCCTCCGCAACGCCGCCCAGTTCATCGCCGCCATGGCCGAGAACAAGACCCGCTTCATGTTCGTCAACACCAACTCCCTCTGGGACGAAATCGTCGAACAAATGACCAAGAAGATCGGCTGCTACTCTCCCTCCATGAACACTCTCTGGCGCACCGGCGGCTTCCTCACCAACAGCCACAGCCCGAAGAAGTTCAGGTCCCGCCGGAAGAAGATCGTCTTCGGACCGACTCAGCCGCCGGACTGCCTCGTGGTTTTCGACTCCGAGAGGAAGTCGTCGGTGATTCTCGAGGCGCATAGGTTGCAGATTCCAATTGTTTCGCTTGTGGACTCGGACATGCCTATCGAGTACTACAACAAGATCACGTATCCGATTCCGTGTAATTCCTCGGTGCAATTTGTGTACCTGTTCTGCAATTTGATCACCAAGACGTTCTTGCTTCAGCAGAAGAAGAGCGGCGCCGTTTCGGCCGAAATTGAGACTAGTGAGCGAGTGGGGGTTATAGAGGAGGCTAAGAGCGCAAAGAAGGATGAGTTGCTTGTGGTTCCTTACGAATTCTTACACATTTCTACTGATGTTGAGAAAATTGAGGAGATGCTGGACAAGCTTGTTGTGATCAAGTTCAATGGAGGTTTGGGTACAAGTATGGGATTCGGTGGCCCCAAGTCAACAATGGAAATTTTTGATGGGTTGACATCTCTTGACTTAATTGTTAATCAAATTGAGTCTCTCAATTCTAAGTATCACTGCAGTGTTCCTTTGGTCCTTGTGAACACAGATAGTACACATGAAGATACGCTGAAGGTCTTGGAGAAATATTCCAAGTCAGACATTGATATTCAGTCTATTAAACAGACCCAACATCCACAGCTCAAGTCACAGGGAGGACAGAGTGGTGAGGATGAACTGTATCCCTCTGGCCACGGAGCAGTATTGCTTTCGCTTGTGAAAAATGGAACCCTTGATGTCCTATTATCAAAGGGGAAGGAGTATGTCCTTGTGGTTGACTCGGATAATGTGGCTGCTAAAATTGACCCAAAAATTTTAGACCATCTGGTTGAAAACAAGATAGACTACTGTATGGAGGTCACACCTACCTCCTCATATGATTCAGATTTGATTGGTTCACGCCTACAGAAGTTTGAGCTTGCAGAAATAGCTCAGAATTCCGTCAAAGATACGGGGAAATTCAAACTTGTCGATACTGGCAGCTTGTGGTTGAATGTTAGAGCCATTAAAAGGCTTTTGGATACAGATGAACTAAAGATTGAAGATTTCTCTGTTTCGAAGGAAACAGAGTCTGATCAAGTTCTTCTGCAAGAAACAGCAGTTGGTTCAGCAATACGGTTCTTCAATAATGCTGTTGGTGTCAACGTTCCTAATTCTCAATTTCTTTCAATGAAAAAAACATCAGATCTACTTCTGCTAAAGTCAAATCTCTATATGTATGATGAAGGGGTTGTAGTTCGGAATATAGCTAGAACCAACCCGGCAAATCCTGTGATCGAATTAGGGCCGGAATTTGAAAAGGTAAGTGGCCTTCTAAGTCGCTTTAAGTCCATGCCCGACATTATTGACCTGGACAGCTTGAAGGTCACTGGTGATGTTTGGTTTGGAGCTGGTATAACTCTCAAGGGGAGAGTAACAATTCATGCAGAACCTGGGATGAAATTGGAAATTCCCGATGGAGTAGTAATAGAGAATGAGGATATTAAGGATCCTTCAGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000313 GO:0000314 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005761 GO:0005763 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015935 GO:0019538 GO:0031974 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:0098798 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00040 ko00052 ko00500 ko00520 ko01100 ko01130 ko03010 map00040 map00052 map00500 map00520 map01100 map01130 map03010

Pfam Domains

Protein Families

Ribosomal_S2 UDPGP

Protein Analysis

625

Amino Acids

69.64

Weight (kDa)

5.78

Isoelectric Point (pI)

37.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_S2	PF00318	11 - 112	8.4e-15	Ribosomal protein S2
Ribosomal_S2	PF00318	126 - 192	6.7e-10	Ribosomal protein S2
UDPGP	PF01704	217 - 593	1e-106	UTP--glucose-1-phosphate uridylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03600
fragaria_vesca	FvH4_7g08140
malus_domestica	MD02G1230600.v1.1
prunus_persica	Prupe.2G107500_v2.0.a1
pyrus_communis	pycom02g19970 pycom07g06540
rosa_chinensis	RchiOBHm_Chr1g0341081 RchiOBHm_Chr1g0363821 RchiOBHm_Chr1g0383121 RchiOBHm_Chr2g0085551 RchiOBHm_Chr3g0481141 RchiOBHm_Chr5g0027611 RchiOBHm_Chr5g0054321 RchiOBHm_Chr6g0246101
rosa_laevigata	RLG00000003952 RLG00000006546 RLG00000013359 RLG00000020654 RLG00000029063
rosa_multiflora	Rmu_sc0000533.1_g000047 Rmu_sc0000821.1_g000002 Rmu_sc0001211.1_g000068 Rmu_sc0002200.1_g000002 Rmu_sc0004332.1_g000001 Rmu_sc0004577.1_g000014 Rmu_sc0008563.1_g000010 Rmu_sc0012351.1_g000004 Rmu_ssc0000190.1_g000008
rosa_roxburghii	Rroxscaffold_1G00011600 Rroxscaffold_4G00311710
rosa_rugosa	Rorug01G0160000.1 Rorug05G0092000
rosa_samantha	Rh1AG174300 Rh1BG142600 Rh1BG221400 Rh1CG162100 Rh1CG365900 Rh1DG174200 Rh1DG248400 Rh1DG383600 Rh3AG240800 Rh5AG444100 Rh5DG194400
rosa_wichuraiana	Rw1G014550 Rw4G015450 Rw5G024540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	236
AccB1I	GGYRCC	1 cut(s)	602
AccBSI	CCGCTC	1 cut(s)	600
AccII	CGCG	2 cut(s)	63, 68
AclI	AACGTT	1 cut(s)	1518
AclWI	GGATC	3 cut(s)	16, 1856, 1869
AcoI	YGGCCR	5 cut(s)	97, 114, 180, 612, 1063
AcsI	RAATTY	7 cut(s)	698, 822, 1185, 1309, 1331, 1664, 1821
AcuI	CTGAAG	3 cut(s)	569, 965, 1851
AcyI	GRCGYC	1 cut(s)	603
AfaI	GTAC	4 cut(s)	494, 548, 784, 928
AfiI	CCNNNNNNNGG	2 cut(s)	67, 1383
AhlI	ACTAGT	1 cut(s)	626
AjnI	CCWGG	2 cut(s)	1722, 1804
AjuI	GAANNNNNNNTTGG	2 cut(s)	1458, 1490
AleI	CACNNNNGTG	1 cut(s)	894
AluBI	AGCT	9 cut(s)	31, 751, 1015, 1291, 1304, 1356, 1622, 1731, 1763
AluI	AGCT	9 cut(s)	31, 751, 1015, 1291, 1304, 1356, 1622, 1731, 1763
Alw21I	GWGCWC	1 cut(s)	41
Alw26I	GTCTC	2 cut(s)	617, 876
AlwI	GGATC	3 cut(s)	16, 1856, 1869
AlwNI	CAGNNNCTG	2 cut(s)	1445, 1805
Ama87I	CYCGRG	1 cut(s)	431
ApeKI	GCWGC	3 cut(s)	264, 1166, 1353
ApoI	RAATTY	7 cut(s)	698, 822, 1185, 1309, 1331, 1664, 1821
Asp700I	GAANNNNTTC	1 cut(s)	335
AspLEI	GCGC	4 cut(s)	297, 439, 605, 665
AspS9I	GGNCC	8 cut(s)	55, 70, 135, 342, 368, 803, 907, 1658
AsuC2I	CCSGG	1 cut(s)	1634
AsuHPI	GGTGA	6 cut(s)	82, 304, 436, 559, 1052, 1757
AsuII	TTCGAA	1 cut(s)	1430
AvaI	CYCGRG	1 cut(s)	431
AvaII	GGWCC	4 cut(s)	135, 342, 368, 907
BalI	TGGCCA	1 cut(s)	1065
BamHI	GGATCC	1 cut(s)	1861
BanI	GGYRCC	1 cut(s)	602
BarI	GAAGNNNNNNTAC	2 cut(s)	1668, 1700
BauI	CACGAG	1 cut(s)	392
BbsI	GAAGAC	1 cut(s)	355
Bbv12I	GWGCWC	1 cut(s)	41
BbvI	GCAGC	3 cut(s)	251, 1153, 1365
BccI	CCATC	3 cut(s)	824, 1203, 1823
BceAI	ACGGC	3 cut(s)	101, 124, 590
BciT130I	CCWGG	2 cut(s)	1724, 1806
BciVI	GTATCC	3 cut(s)	522, 1065, 1387
BclI	TGATCA	3 cut(s)	564, 759, 1447
BcnI	CCSGG	1 cut(s)	1634
BcoDI	GTCTC	2 cut(s)	617, 876
BcuI	ACTAGT	1 cut(s)	626
BfaI	CTAG	2 cut(s)	627, 1623
BfmI	CTRYAG	2 cut(s)	892, 1277
BfoI	RGCGCY	1 cut(s)	606
BfuI	GTATCC	3 cut(s)	522, 1065, 1387
BglI	GCCNNNNNGGC	2 cut(s)	179, 611
BglII	AGATCT	1 cut(s)	1558
BmcAI	AGTACT	1 cut(s)	494
Bme1390I	CCNGG	3 cut(s)	1634, 1724, 1806
Bme18I	GGWCC	4 cut(s)	135, 342, 368, 907
BmeT110I	CYCGRG	1 cut(s)	431
BmgT120I	GGNCC	8 cut(s)	55, 70, 135, 342, 368, 803, 907, 1658
BmiI	GGNNCC	7 cut(s)	137, 344, 604, 690, 805, 1102, 1863
BmrFI	CCNGG	3 cut(s)	1634, 1724, 1806
BmrI	ACTGGG	1 cut(s)	157
BmsI	GCATC	1 cut(s)	729
BmuI	ACTGGG	1 cut(s)	157
BpiI	GAAGAC	1 cut(s)	355
Bpu14I	TTCGAA	1 cut(s)	1430
BpuEI	CTTGAG	2 cut(s)	1001, 1760
BpuMI	CCSGG	1 cut(s)	1634
BsaAI	YACGTR	1 cut(s)	510
BsaHI	GRCGYC	1 cut(s)	603
BsaJI	CCNNGG	4 cut(s)	177, 531, 1066, 1805
BsaXI	ACNNNNNCTCC	4 cut(s)	203, 233, 260, 290
Bsc4I	CCNNNNNNNGG	2 cut(s)	67, 1383
Bse118I	RCCGGY	1 cut(s)	299
Bse1I	ACTGG	3 cut(s)	163, 1354, 1747
BseBI	CCWGG	2 cut(s)	1724, 1806
BseDI	CCNNGG	4 cut(s)	177, 531, 1066, 1805
BseGI	GGATG	4 cut(s)	679, 1006, 1051, 1815
BseLI	CCNNNNNNNGG	2 cut(s)	67, 1383
BseMII	CTCAG	3 cut(s)	26, 389, 1319
BseNI	ACTGG	3 cut(s)	163, 1354, 1747
BseRI	GAGGAG	3 cut(s)	665, 749, 1234
BseX3I	CGGCCG	1 cut(s)	612
BseXI	GCAGC	3 cut(s)	251, 1153, 1365
Bsh1236I	CGCG	2 cut(s)	63, 68
Bsh1285I	CGRYCG	2 cut(s)	133, 615
BshNI	GGYRCC	1 cut(s)	602
BsiEI	CGRYCG	2 cut(s)	133, 615
BsiHKAI	GWGCWC	1 cut(s)	41
BsiHKCI	CYCGRG	1 cut(s)	431
BsiSI	CCGG	5 cut(s)	300, 349, 383, 1634, 1661
BslFI	GGGAC	2 cut(s)	242, 328
BslI	CCNNNNNNNGG	2 cut(s)	67, 1383
BsmAI	GTCTC	2 cut(s)	617, 876
BsmFI	GGGAC	2 cut(s)	242, 328
BsoBI	CYCGRG	1 cut(s)	431
Bsp119I	TTCGAA	1 cut(s)	1430
Bsp1286I	GDGCHC	1 cut(s)	41
Bsp19I	CCATGG	1 cut(s)	177
BspCNI	CTCAG	3 cut(s)	27, 388, 1318
BspFNI	CGCG	2 cut(s)	63, 68
BspLI	GGNNCC	7 cut(s)	137, 344, 604, 690, 805, 1102, 1863
BspMAI	CTGCAG	1 cut(s)	896
BspPI	GGATC	3 cut(s)	16, 1856, 1869
BspQI	GCTCTTC	1 cut(s)	590
BspT104I	TTCGAA	1 cut(s)	1430
BspT107I	GGYRCC	1 cut(s)	602
BsrBI	CCGCTC	1 cut(s)	600
BsrFI	RCCGGY	1 cut(s)	299
BsrI	ACTGG	3 cut(s)	163, 1354, 1747
BssAI	RCCGGY	1 cut(s)	299
BssECI	CCNNGG	4 cut(s)	177, 531, 1066, 1805
BssNI	GRCGYC	1 cut(s)	603
BssSI	CACGAG	1 cut(s)	392
BssT1I	CCWWGG	1 cut(s)	177
Bst2BI	CACGAG	1 cut(s)	392
Bst2UI	CCWGG	2 cut(s)	1724, 1806
Bst4CI	ACNGT	3 cut(s)	1053, 1223, 1491
Bst6I	CTCTTC	1 cut(s)	590
BstACI	GRCGYC	1 cut(s)	603
BstAPI	GCANNNNNTGC	1 cut(s)	445
BstBAI	YACGTR	1 cut(s)	510
BstBI	TTCGAA	1 cut(s)	1430
BstC8I	GCNNGC	1 cut(s)	1293
BstDEI	CTNAG	6 cut(s)	35, 375, 657, 882, 1305, 1688
BstDSI	CCRYGG	2 cut(s)	177, 1066
BstF5I	GGATG	4 cut(s)	679, 1006, 1051, 1815
BstFNI	CGCG	2 cut(s)	63, 68
BstH2I	RGCGCY	1 cut(s)	606
BstHHI	GCGC	4 cut(s)	297, 439, 605, 665
BstMAI	GTCTC	2 cut(s)	617, 876
BstMCI	CGRYCG	2 cut(s)	133, 615
BstMWI	GCNNNNNNNGC	7 cut(s)	179, 303, 445, 611, 662, 748, 1301
BstNI	CCWGG	2 cut(s)	1724, 1806
BstNSI	RCATGY	1 cut(s)	484
BstSCI	CCNGG	3 cut(s)	1632, 1722, 1804
BstSFI	CTRYAG	2 cut(s)	892, 1277
BstUI	CGCG	2 cut(s)	63, 68
BstV1I	GCAGC	3 cut(s)	251, 1153, 1365
BstV2I	GAAGAC	1 cut(s)	355
BstX2I	RGATCY	2 cut(s)	1558, 1861
BstYI	RGATCY	2 cut(s)	1558, 1861
BstZI	CGGCCG	1 cut(s)	612
BsuI	GTATCC	3 cut(s)	522, 1065, 1387
BtgI	CCRYGG	2 cut(s)	177, 1066
BtgZI	GCGATG	1 cut(s)	154
BtsCI	GGATG	4 cut(s)	679, 1006, 1051, 1815
BtsI	GCAGTG	2 cut(s)	889, 901
BtsIMutI	CAGTG	3 cut(s)	889, 901, 1740
Cac8I	GCNNGC	1 cut(s)	1293
CaiI	CAGNNNCTG	2 cut(s)	1445, 1805
CfoI	GCGC	4 cut(s)	297, 439, 605, 665
Cfr10I	RCCGGY	1 cut(s)	299
Cfr13I	GGNCC	8 cut(s)	55, 70, 135, 342, 368, 803, 907, 1658
CpoI	CGGWCCG	1 cut(s)	368
CseI	GACGC	2 cut(s)	13, 52
Csp6I	GTAC	4 cut(s)	493, 547, 783, 927
CspI	CGGWCCG	1 cut(s)	368
CviAII	CATG	8 cut(s)	112, 178, 202, 280, 481, 932, 1705, 1796
CviQI	GTAC	4 cut(s)	493, 547, 783, 927
DdeI	CTNAG	6 cut(s)	35, 375, 657, 882, 1305, 1688
DinI	GGCGCC	1 cut(s)	604
DrdI	GACNNNNNNGTC	1 cut(s)	236
DseDI	GACNNNNNNGTC	1 cut(s)	236
EaeI	YGGCCR	5 cut(s)	97, 114, 180, 612, 1063
EagI	CGGCCG	1 cut(s)	612
Eam1104I	CTCTTC	1 cut(s)	590
EarI	CTCTTC	1 cut(s)	590
EclXI	CGGCCG	1 cut(s)	612
Eco130I	CCWWGG	1 cut(s)	177
Eco47I	GGWCC	4 cut(s)	135, 342, 368, 907
Eco52I	CGGCCG	1 cut(s)	612
Eco57I	CTGAAG	3 cut(s)	569, 965, 1851
Eco88I	CYCGRG	1 cut(s)	431
EcoO109I	RGGNCCY	1 cut(s)	342
EcoRI	GAATTC	2 cut(s)	698, 1309
EcoRII	CCWGG	2 cut(s)	1722, 1804
EcoT14I	CCWWGG	1 cut(s)	177
EgeI	GGCGCC	1 cut(s)	604
EheI	GGCGCC	1 cut(s)	604
ErhI	CCWWGG	1 cut(s)	177
FaeI	CATG	8 cut(s)	115, 181, 205, 283, 484, 935, 1708, 1799
FalI	AAGNNNNNCTT	6 cut(s)	182, 214, 347, 379, 563, 595
FaqI	GGGAC	2 cut(s)	242, 328
FatI	CATG	8 cut(s)	111, 177, 201, 279, 480, 931, 1704, 1795
FauI	CCCGC	2 cut(s)	203, 353
FauNDI	CATATG	1 cut(s)	1249
FbaI	TGATCA	3 cut(s)	564, 759, 1447
FokI	GGATG	4 cut(s)	686, 993, 1058, 1822
FspBI	CTAG	2 cut(s)	627, 1623
GlaI	GCGC	4 cut(s)	296, 438, 604, 664
HaeII	RGCGCY	1 cut(s)	606
HapII	CCGG	5 cut(s)	300, 349, 383, 1634, 1661
HgaI	GACGC	2 cut(s)	13, 52
HhaI	GCGC	4 cut(s)	297, 439, 605, 665
Hin1I	GRCGYC	1 cut(s)	603
Hin1II	CATG	8 cut(s)	115, 181, 205, 283, 484, 935, 1708, 1799
Hin6I	GCGC	4 cut(s)	295, 437, 603, 663
HinP1I	GCGC	4 cut(s)	295, 437, 603, 663
HincII	GTYRAC	5 cut(s)	211, 813, 837, 1150, 1516
HindII	GTYRAC	5 cut(s)	211, 813, 837, 1150, 1516
HindIII	AAGCTT	2 cut(s)	29, 749
HpaII	CCGG	5 cut(s)	300, 349, 383, 1634, 1661
HphI	GGTGA	6 cut(s)	82, 304, 436, 559, 1052, 1757
Hpy188III	TCNNGA	4 cut(s)	25, 431, 845, 1826
Hpy99I	CGWCG	3 cut(s)	68, 242, 424
HpyAV	CCTTC	9 cut(s)	103, 664, 940, 1123, 1426, 1592, 1694, 1729, 1875
HpyCH4III	ACNGT	3 cut(s)	1053, 1223, 1491
HpyCH4IV	ACGT	3 cut(s)	509, 575, 1518
HpyCH4V	TGCA	7 cut(s)	448, 538, 558, 894, 1295, 1462, 1799
HpyF10VI	GCNNNNNNNGC	7 cut(s)	179, 303, 445, 611, 662, 748, 1301
HpyF3I	CTNAG	6 cut(s)	35, 375, 657, 882, 1305, 1688
HpySE526I	ACGT	3 cut(s)	509, 575, 1518
Hsp92I	GRCGYC	1 cut(s)	603
Hsp92II	CATG	8 cut(s)	115, 181, 205, 283, 484, 935, 1708, 1799
HspAI	GCGC	4 cut(s)	295, 437, 603, 663
KasI	GGCGCC	1 cut(s)	602
Ksp22I	TGATCA	3 cut(s)	564, 759, 1447
LguI	GCTCTTC	1 cut(s)	590
LmnI	GCTCC	3 cut(s)	12, 1070, 1760
Lsp1109I	GCAGC	3 cut(s)	251, 1153, 1365
LweI	GCATC	1 cut(s)	729
MaeI	CTAG	2 cut(s)	627, 1623
MaeII	ACGT	3 cut(s)	509, 575, 1518
MaeIII	GTNAC	4 cut(s)	1020, 1231, 1738, 1786
MbiI	CCGCTC	1 cut(s)	600
MfeI	CAATTG	1 cut(s)	456
MflI	RGATCY	2 cut(s)	1558, 1861
MhlI	GDGCHC	1 cut(s)	41
MlsI	TGGCCA	1 cut(s)	1065
MluNI	TGGCCA	1 cut(s)	1065
Mly113I	GGCGCC	1 cut(s)	603
MlyI	GAGTC	7 cut(s)	119, 367, 398, 467, 878, 1145, 1451
Mox20I	TGGCCA	1 cut(s)	1065
MroXI	GAANNNNTTC	1 cut(s)	335
MscI	TGGCCA	1 cut(s)	1065
MseI	TTAA	6 cut(s)	851, 858, 993, 1380, 1698, 1857
MslI	CAYNNNNRTG	1 cut(s)	894
Msp20I	TGGCCA	1 cut(s)	1065
MspI	CCGG	5 cut(s)	300, 349, 383, 1634, 1661
MspR9I	CCNGG	3 cut(s)	1634, 1724, 1806
MunI	CAATTG	1 cut(s)	456
MvaI	CCWGG	2 cut(s)	1724, 1806
MvnI	CGCG	2 cut(s)	63, 68
MwoI	GCNNNNNNNGC	7 cut(s)	179, 303, 445, 611, 662, 748, 1301
NarI	GGCGCC	1 cut(s)	603
NciI	CCSGG	1 cut(s)	1634
NcoI	CCATGG	1 cut(s)	177
NdeI	CATATG	1 cut(s)	1249
NlaIII	CATG	8 cut(s)	115, 181, 205, 283, 484, 935, 1708, 1799
NlaIV	GGNNCC	7 cut(s)	137, 344, 604, 690, 805, 1102, 1863
NmeAIII	GCCGAG	1 cut(s)	208
NmuCI	GTSAC	3 cut(s)	1020, 1231, 1738
NspI	RCATGY	1 cut(s)	484
NspV	TTCGAA	1 cut(s)	1430
OliI	CACNNNNGTG	1 cut(s)	894
PaeR7I	CTCGAG	1 cut(s)	431
PciSI	GCTCTTC	1 cut(s)	590
PcsI	WCGNNNNNNNCGW	3 cut(s)	114, 237, 399
PdmI	GAANNNNTTC	1 cut(s)	335
PfeI	GAWTC	5 cut(s)	427, 451, 517, 795, 1253
Ple19I	CGATCG	1 cut(s)	133
PleI	GAGTC	7 cut(s)	119, 367, 398, 467, 877, 1145, 1450
PluTI	GGCGCC	1 cut(s)	606
PpsI	GAGTC	7 cut(s)	119, 367, 398, 467, 877, 1145, 1450
Ppu21I	YACGTR	1 cut(s)	510
PpuMI	RGGWCCY	1 cut(s)	342
Psp1406I	AACGTT	1 cut(s)	1518
Psp5II	RGGWCCY	1 cut(s)	342
Psp6I	CCWGG	2 cut(s)	1722, 1804
PspGI	CCWGG	2 cut(s)	1722, 1804
PspN4I	GGNNCC	7 cut(s)	137, 344, 604, 690, 805, 1102, 1863
PspPI	GGNCC	8 cut(s)	55, 70, 135, 342, 368, 803, 907, 1658
PspPPI	RGGWCCY	1 cut(s)	342
PstI	CTGCAG	1 cut(s)	896
PstNI	CAGNNNCTG	2 cut(s)	1445, 1805
PsuI	RGATCY	2 cut(s)	1558, 1861
PvuI	CGATCG	1 cut(s)	133
RsaI	GTAC	4 cut(s)	494, 548, 784, 928
RsaNI	GTAC	4 cut(s)	493, 547, 783, 927
RseI	CAYNNNNRTG	1 cut(s)	894
Rsr2I	CGGWCCG	1 cut(s)	368
RsrII	CGGWCCG	1 cut(s)	368
SapI	GCTCTTC	1 cut(s)	590
SaqAI	TTAA	6 cut(s)	851, 858, 993, 1380, 1698, 1857
Sau96I	GGNCC	8 cut(s)	55, 70, 135, 342, 368, 803, 907, 1658
ScaI	AGTACT	1 cut(s)	494
SchI	GAGTC	7 cut(s)	119, 367, 398, 467, 878, 1145, 1451
ScrFI	CCNGG	3 cut(s)	1634, 1724, 1806
SduI	GDGCHC	1 cut(s)	41
SfaNI	GCATC	1 cut(s)	729
SfcI	CTRYAG	2 cut(s)	892, 1277
SfoI	GGCGCC	1 cut(s)	604
Sfr274I	CTCGAG	1 cut(s)	431
SfuI	TTCGAA	1 cut(s)	1430
SgrAI	CRCCGGYG	1 cut(s)	299
SinI	GGWCC	4 cut(s)	135, 342, 368, 907
SlaI	CTCGAG	1 cut(s)	431
SmiMI	CAYNNNNRTG	1 cut(s)	894
SmlI	CTYRAG	3 cut(s)	431, 1016, 1775
SmoI	CTYRAG	3 cut(s)	431, 1016, 1775
SpeI	ACTAGT	1 cut(s)	626
SspDI	GGCGCC	1 cut(s)	602
SspI	AATATT	1 cut(s)	962
SspMI	CTAG	2 cut(s)	627, 1623
StyD4I	CCNGG	3 cut(s)	1632, 1722, 1804
StyI	CCWWGG	1 cut(s)	177
TaaI	ACNGT	3 cut(s)	1053, 1223, 1491
TaiI	ACGT	3 cut(s)	512, 578, 1521
TaqI	TCGA	8 cut(s)	123, 240, 402, 432, 489, 1344, 1430, 1650
TaqII	GACCGA	1 cut(s)	385
TatI	WGTACW	2 cut(s)	492, 926
TauI	GCSGC	8 cut(s)	60, 63, 71, 161, 176, 306, 382, 603
TfiI	GAWTC	5 cut(s)	427, 451, 517, 795, 1253
Tru1I	TTAA	6 cut(s)	851, 858, 993, 1380, 1698, 1857
Tru9I	TTAA	6 cut(s)	851, 858, 993, 1380, 1698, 1857
TscAI	CASTG	3 cut(s)	896, 901, 1747
TseFI	GTSAC	3 cut(s)	1020, 1231, 1738
TseI	GCWGC	3 cut(s)	264, 1166, 1353
Tsp45I	GTSAC	3 cut(s)	1020, 1231, 1738
TspGWI	ACGGA	3 cut(s)	510, 1083, 1303
TspRI	CASTG	3 cut(s)	896, 901, 1747
VpaK11BI	GGWCC	4 cut(s)	135, 342, 368, 907
XapI	RAATTY	7 cut(s)	698, 822, 1185, 1309, 1331, 1664, 1821
XceI	RCATGY	1 cut(s)	484
XcmI	CCANNNNNNNNNTGG	2 cut(s)	49, 814
XhoI	CTCGAG	1 cut(s)	431
XmnI	GAANNNNTTC	1 cut(s)	335
XspI	CTAG	2 cut(s)	627, 1623
ZrmI	AGTACT	1 cut(s)	494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.