Rmu_ssc0000190.1_g000008

UTP--glucose-1-phosphate uridylyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000190.1
Physical Location & Seq
Reverse (-)
10315 .. 11717
1403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000190.1_g000008.1.cds

Sequence Viewer

Length: 936 bp
atgccgaggacccagatgtggagaataaggttgacgaaagaagatagcagaaacaccagatgcccagaaagattagtgcttctgggggttgaattgatgggcggtgatcggtgggtcttggccggcgatgaaacatgcccattggacggtgtctctctctccatatcgacgttggtgacctgctgcatctcctccattcgcctgaatctacgtcgccaccttctcctgcgagctgcttcagagctacaacgacagagaggagctcggattgtagatcattgtcggtgcagtctctcttgcagggccgccttctcctccggtaaggagtacatatccaaggtcgaggctgagctctctgaggtctgcgctaacatcctgaggattcgtctgattttcatctccgccatggccgagaacaaggcccgcttcatgttcgtcaacaccaactccctctgcgacgaaatcgtcgaacaaatgaccaagaagatcggctgctactctccctccatgaacactctctggagcaccggcggcttcctcaccaatagtcacagccctaagaagttcaggtctcgccggaagaagatcgtcttcggaccgactcagccgccggactgccttgtggttttcgactccgcgaggaagtcgtcggtgattctcgaggagcataggttgcagattctgattgtttcgcttgtggactcggacatgcctatcgagtactacaaaaagatcacgtatccgattccgtgtaattcctcggtgcaatttgtgtacctgttctgcaatttgatcaccaagacgttcatgcttcagcagaagaaaagcggcgccgattcggccgaaattgagactagtgagcgagtgggggttatagaggaggctaagagcgcaaagaaggatgaggtgcttatggttcaatcaattaaaggatga

Protein Analysis

311

Amino Acids

35.15

Weight (kDa)

9.16

Isoelectric Point (pI)

51.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 464
Acc36I ACCTGC 1 cut(s) 188
AccB1I GGYRCC 1 cut(s) 830
AccII CGCG 1 cut(s) 638
AciI CCGC 8 cut(s) 102, 306, 402, 424, 531, 608, 636, 828
AcoI YGGCCR 3 cut(s) 120, 408, 840
AcuI CTGAAG 2 cut(s) 222, 797
AcyI GRCGYC 1 cut(s) 831
AfaI GTAC 3 cut(s) 329, 722, 776
AfiI CCNNNNNNNGG 2 cut(s) 18, 146
AgsI TTSAA 2 cut(s) 92, 920
AhlI ACTAGT 1 cut(s) 854
AluBI AGCT 4 cut(s) 233, 244, 263, 352
AluI AGCT 4 cut(s) 233, 244, 263, 352
Alw21I GWGCWC 3 cut(s) 265, 354, 527
Alw26I GTCTC 4 cut(s) 157, 296, 576, 845
AlwNI CAGNNNCTG 1 cut(s) 682
Ama87I CYCGRG 1 cut(s) 659
AoxI GGCC 5 cut(s) 120, 303, 408, 420, 840
ApeKI GCWGC 3 cut(s) 183, 233, 492
AspLEI GCGC 3 cut(s) 368, 833, 893
AspS9I GGNCC 4 cut(s) 9, 303, 421, 596
AsuHPI GGTGA 5 cut(s) 116, 187, 532, 664, 787
AvaI CYCGRG 1 cut(s) 659
AvaII GGWCC 2 cut(s) 9, 596
AxyI CCTNAGG 1 cut(s) 377
BanI GGYRCC 1 cut(s) 830
BanII GRGCYC 2 cut(s) 265, 354
BbsI GAAGAC 1 cut(s) 583
Bbv12I GWGCWC 3 cut(s) 265, 354, 527
BbvI GCAGC 3 cut(s) 170, 220, 479
BccI CCATC 1 cut(s) 91
BciVI GTATCC 1 cut(s) 750
BclI TGATCA 1 cut(s) 792
BcoDI GTCTC 4 cut(s) 157, 296, 576, 845
BcuI ACTAGT 1 cut(s) 854
BfaI CTAG 1 cut(s) 855
BfoI RGCGCY 1 cut(s) 834
BfuAI ACCTGC 1 cut(s) 188
BfuI GTATCC 1 cut(s) 750
BglI GCCNNNNNGGC 1 cut(s) 839
BisI GCNGC 7 cut(s) 184, 234, 306, 493, 532, 608, 829
BlpI GCTNAGC 1 cut(s) 348
BlsI GCNGC 7 cut(s) 185, 235, 307, 494, 533, 609, 830
BmcAI AGTACT 1 cut(s) 722
Bme18I GGWCC 2 cut(s) 9, 596
BmeT110I CYCGRG 1 cut(s) 659
BmgT120I GGNCC 4 cut(s) 9, 303, 421, 596
BmiI GGNNCC 2 cut(s) 11, 832
BmsI GCATC 2 cut(s) 50, 195
BpiI GAAGAC 1 cut(s) 583
BplI GAGNNNNNCTC 2 cut(s) 247, 279
BpmI CTGGAG 1 cut(s) 541
Bpu1102I GCTNAGC 1 cut(s) 348
BsaAI YACGTR 1 cut(s) 738
BsaBI GATNNNNATC 1 cut(s) 395
BsaHI GRCGYC 1 cut(s) 831
BsaI GGTCTC 1 cut(s) 576
BsaJI CCNNGG 4 cut(s) 5, 336, 405, 759
BsaWI WCCGGW 1 cut(s) 317
BsaXI ACNNNNNCTCC 6 cut(s) 431, 461, 488, 518, 656, 686
Bsc4I CCNNNNNNNGG 2 cut(s) 18, 146
Bse118I RCCGGY 2 cut(s) 122, 527
Bse21I CCTNAGG 1 cut(s) 377
Bse8I GATNNNNATC 1 cut(s) 395
BseDI CCNNGG 4 cut(s) 5, 336, 405, 759
BseGI GGATG 2 cut(s) 372, 907
BseJI GATNNNNATC 1 cut(s) 395
BseLI CCNNNNNNNGG 2 cut(s) 18, 146
BseMII CTCAG 4 cut(s) 339, 348, 368, 617
BseRI GAGGAG 5 cut(s) 181, 273, 304, 677, 893
BseX3I CGGCCG 1 cut(s) 840
BseXI GCAGC 3 cut(s) 170, 220, 479
BsgI GTGCAG 1 cut(s) 307
Bsh1236I CGCG 1 cut(s) 638
Bsh1285I CGRYCG 1 cut(s) 843
BshFI GGCC 5 cut(s) 122, 305, 410, 422, 842
BshNI GGYRCC 1 cut(s) 830
BsiEI CGRYCG 1 cut(s) 843
BsiHKAI GWGCWC 3 cut(s) 265, 354, 527
BsiHKCI CYCGRG 1 cut(s) 659
BsiSI CCGG 5 cut(s) 123, 318, 528, 577, 611
BslI CCNNNNNNNGG 2 cut(s) 18, 146
BsmAI GTCTC 4 cut(s) 157, 296, 576, 845
BsnI GGCC 5 cut(s) 122, 305, 410, 422, 842
Bso31I GGTCTC 1 cut(s) 576
BsoBI CYCGRG 1 cut(s) 659
Bsp1286I GDGCHC 3 cut(s) 265, 354, 527
Bsp143I GATC 6 cut(s) 106, 274, 486, 585, 732, 792
Bsp1720I GCTNAGC 1 cut(s) 348
Bsp19I CCATGG 1 cut(s) 405
BspACI CCGC 8 cut(s) 102, 306, 402, 424, 531, 608, 636, 828
BspANI GGCC 5 cut(s) 122, 305, 410, 422, 842
BspCNI CTCAG 4 cut(s) 340, 349, 369, 616
BspFNI CGCG 1 cut(s) 638
BspLI GGNNCC 2 cut(s) 11, 832
BspMI ACCTGC 1 cut(s) 188
BspT107I GGYRCC 1 cut(s) 830
BspTNI GGTCTC 1 cut(s) 576
BsrFI RCCGGY 2 cut(s) 122, 527
BssAI RCCGGY 2 cut(s) 122, 527
BssECI CCNNGG 4 cut(s) 5, 336, 405, 759
BssMI GATC 6 cut(s) 106, 274, 486, 585, 732, 792
BssNI GRCGYC 1 cut(s) 831
BssT1I CCWWGG 2 cut(s) 336, 405
Bst4CI ACNGT 1 cut(s) 149
BstACI GRCGYC 1 cut(s) 831
BstAPI GCANNNNNTGC 1 cut(s) 673
BstBAI YACGTR 1 cut(s) 738
BstC8I GCNNGC 3 cut(s) 124, 231, 424
BstDEI CTNAG 6 cut(s) 348, 357, 377, 558, 603, 885
BstDSI CCRYGG 1 cut(s) 405
BstEII GGTNACC 1 cut(s) 175
BstF5I GGATG 2 cut(s) 372, 907
BstFNI CGCG 1 cut(s) 638
BstH2I RGCGCY 1 cut(s) 834
BstHHI GCGC 3 cut(s) 368, 833, 893
BstKTI GATC 6 cut(s) 109, 277, 489, 588, 735, 795
BstMAI GTCTC 4 cut(s) 157, 296, 576, 845
BstMBI GATC 6 cut(s) 106, 274, 486, 585, 732, 792
BstMCI CGRYCG 1 cut(s) 843
BstMWI GCNNNNNNNGC 4 cut(s) 531, 673, 839, 890
BstNSI RCATGY 2 cut(s) 138, 712
BstPI GGTNACC 1 cut(s) 175
BstUI CGCG 1 cut(s) 638
BstV1I GCAGC 3 cut(s) 170, 220, 479
BstV2I GAAGAC 1 cut(s) 583
BstZI CGGCCG 1 cut(s) 840
Bsu36I CCTNAGG 1 cut(s) 377
BsuI GTATCC 1 cut(s) 750
BsuRI GGCC 5 cut(s) 122, 305, 410, 422, 842
BtgI CCRYGG 1 cut(s) 405
BtgZI GCGATG 1 cut(s) 141
BtsCI GGATG 2 cut(s) 372, 907
BveI ACCTGC 1 cut(s) 188
Cac8I GCNNGC 3 cut(s) 124, 231, 424
CaiI CAGNNNCTG 1 cut(s) 682
CfoI GCGC 3 cut(s) 368, 833, 893
Cfr10I RCCGGY 2 cut(s) 122, 527
Cfr13I GGNCC 4 cut(s) 9, 303, 421, 596
CpoI CGGWCCG 1 cut(s) 596
Csp6I GTAC 3 cut(s) 328, 721, 775
CspI CGGWCCG 1 cut(s) 596
CviAII CATG 6 cut(s) 135, 406, 430, 508, 709, 808
CviQI GTAC 3 cut(s) 328, 721, 775
DdeI CTNAG 6 cut(s) 348, 357, 377, 558, 603, 885
DinI GGCGCC 1 cut(s) 832
DpnI GATC 6 cut(s) 108, 276, 488, 587, 734, 794
DpnII GATC 6 cut(s) 106, 274, 486, 585, 732, 792
DrdI GACNNNNNNGTC 1 cut(s) 464
DseDI GACNNNNNNGTC 1 cut(s) 464
EaeI YGGCCR 3 cut(s) 120, 408, 840
EagI CGGCCG 1 cut(s) 840
EciI GGCGGA 1 cut(s) 391
Ecl136II GAGCTC 2 cut(s) 263, 352
EclXI CGGCCG 1 cut(s) 840
Eco130I CCWWGG 2 cut(s) 336, 405
Eco24I GRGCYC 2 cut(s) 265, 354
Eco31I GGTCTC 1 cut(s) 576
Eco47I GGWCC 2 cut(s) 9, 596
Eco52I CGGCCG 1 cut(s) 840
Eco53kI GAGCTC 2 cut(s) 263, 352
Eco57I CTGAAG 2 cut(s) 222, 797
Eco81I CCTNAGG 1 cut(s) 377
Eco88I CYCGRG 1 cut(s) 659
Eco91I GGTNACC 1 cut(s) 175
EcoICRI GAGCTC 2 cut(s) 263, 352
EcoO109I RGGNCCY 1 cut(s) 9
EcoO65I GGTNACC 1 cut(s) 175
EcoT14I CCWWGG 2 cut(s) 336, 405
EcoT38I GRGCYC 2 cut(s) 265, 354
EgeI GGCGCC 1 cut(s) 832
EheI GGCGCC 1 cut(s) 832
ErhI CCWWGG 2 cut(s) 336, 405
FaeI CATG 6 cut(s) 138, 409, 433, 511, 712, 811
FalI AAGNNNNNCTT 4 cut(s) 410, 442, 575, 607
FatI CATG 6 cut(s) 134, 405, 429, 507, 708, 807
FauI CCCGC 1 cut(s) 431
FbaI TGATCA 1 cut(s) 792
Fnu4HI GCNGC 7 cut(s) 184, 234, 306, 493, 532, 608, 829
FokI GGATG 2 cut(s) 359, 914
FriOI GRGCYC 2 cut(s) 265, 354
Fsp4HI GCNGC 7 cut(s) 184, 234, 306, 493, 532, 608, 829
FspBI CTAG 1 cut(s) 855
GlaI GCGC 3 cut(s) 367, 832, 892
GluI GCNGC 7 cut(s) 184, 234, 306, 493, 532, 608, 829
GsuI CTGGAG 1 cut(s) 541
HaeII RGCGCY 1 cut(s) 834
HaeIII GGCC 5 cut(s) 122, 305, 410, 422, 842
HapII CCGG 5 cut(s) 123, 318, 528, 577, 611
HhaI GCGC 3 cut(s) 368, 833, 893
Hin1I GRCGYC 1 cut(s) 831
Hin1II CATG 6 cut(s) 138, 409, 433, 511, 712, 811
Hin6I GCGC 3 cut(s) 366, 831, 891
HinP1I GCGC 3 cut(s) 366, 831, 891
HincII GTYRAC 2 cut(s) 33, 439
HindII GTYRAC 2 cut(s) 33, 439
HinfI GANTC 9 cut(s) 205, 382, 601, 632, 655, 679, 701, 745, 836
HpaII CCGG 5 cut(s) 123, 318, 528, 577, 611
HphI GGTGA 5 cut(s) 116, 187, 532, 664, 787
Hpy166II GTNNAC 4 cut(s) 33, 439, 700, 775
Hpy188I TCNGA 8 cut(s) 241, 267, 358, 390, 596, 684, 706, 744
Hpy188III TCNNGA 3 cut(s) 376, 520, 659
Hpy8I GTNNAC 4 cut(s) 33, 439, 700, 775
Hpy99I CGWCG 5 cut(s) 172, 216, 461, 470, 652
HpyAV CCTTC 3 cut(s) 230, 319, 892
HpyCH4III ACNGT 1 cut(s) 149
HpyCH4IV ACGT 4 cut(s) 170, 211, 737, 803
HpyCH4V TGCA 6 cut(s) 186, 288, 300, 676, 766, 786
HpyF10VI GCNNNNNNNGC 4 cut(s) 531, 673, 839, 890
HpyF3I CTNAG 6 cut(s) 348, 357, 377, 558, 603, 885
HpySE526I ACGT 4 cut(s) 170, 211, 737, 803
Hsp92I GRCGYC 1 cut(s) 831
Hsp92II CATG 6 cut(s) 138, 409, 433, 511, 712, 811
HspAI GCGC 3 cut(s) 366, 831, 891
KasI GGCGCC 1 cut(s) 830
KroI GCCGGC 1 cut(s) 122
KroNI GCCGGC 1 cut(s) 124
Ksp22I TGATCA 1 cut(s) 792
Kzo9I GATC 6 cut(s) 106, 274, 486, 585, 732, 792
LmnI GCTCC 3 cut(s) 260, 522, 664
Lsp1109I GCAGC 3 cut(s) 170, 220, 479
LweI GCATC 2 cut(s) 50, 195
MaeI CTAG 1 cut(s) 855
MaeII ACGT 4 cut(s) 170, 211, 737, 803
MaeIII GTNAC 2 cut(s) 175, 548
MalI GATC 6 cut(s) 108, 276, 488, 587, 734, 794
MboI GATC 6 cut(s) 106, 274, 486, 585, 732, 792
MboII GAAGA 6 cut(s) 53, 496, 583, 592, 595, 832
MhlI GDGCHC 3 cut(s) 265, 354, 527
MluCI AATT 6 cut(s) 92, 754, 767, 787, 846, 924
Mly113I GGCGCC 1 cut(s) 831
MlyI GAGTC 3 cut(s) 595, 626, 695
MroNI GCCGGC 1 cut(s) 122
MseI TTAA 1 cut(s) 927
MspI CCGG 5 cut(s) 123, 318, 528, 577, 611
MvnI CGCG 1 cut(s) 638
MwoI GCNNNNNNNGC 4 cut(s) 531, 673, 839, 890
NaeI GCCGGC 1 cut(s) 124
NarI GGCGCC 1 cut(s) 831
NcoI CCATGG 1 cut(s) 405
NdeII GATC 6 cut(s) 106, 274, 486, 585, 732, 792
NgoMIV GCCGGC 1 cut(s) 122
NlaIII CATG 6 cut(s) 138, 409, 433, 511, 712, 811
NlaIV GGNNCC 2 cut(s) 11, 832
NmeAIII GCCGAG 2 cut(s) 30, 436
NmuCI GTSAC 2 cut(s) 175, 548
NspI RCATGY 2 cut(s) 138, 712
PaeR7I CTCGAG 1 cut(s) 659
PcsI WCGNNNNNNNCGW 1 cut(s) 465
PdiI GCCGGC 1 cut(s) 124
PfeI GAWTC 6 cut(s) 205, 382, 655, 679, 745, 836
PflFI GACNNNGTC 1 cut(s) 149
PkrI GCNGC 7 cut(s) 185, 235, 307, 494, 533, 609, 830
PleI GAGTC 3 cut(s) 595, 626, 695
PluTI GGCGCC 1 cut(s) 834
PpsI GAGTC 3 cut(s) 595, 626, 695
Ppu21I YACGTR 1 cut(s) 738
PpuMI RGGWCCY 1 cut(s) 9
Psp124BI GAGCTC 2 cut(s) 265, 354
Psp5II RGGWCCY 1 cut(s) 9
PspEI GGTNACC 1 cut(s) 175
PspN4I GGNNCC 2 cut(s) 11, 832
PspPI GGNCC 4 cut(s) 9, 303, 421, 596
PspPPI RGGWCCY 1 cut(s) 9
PstNI CAGNNNCTG 1 cut(s) 682
PsyI GACNNNGTC 1 cut(s) 149
RsaI GTAC 3 cut(s) 329, 722, 776
RsaNI GTAC 3 cut(s) 328, 721, 775
Rsr2I CGGWCCG 1 cut(s) 596
RsrII CGGWCCG 1 cut(s) 596
SacI GAGCTC 2 cut(s) 265, 354
SaqAI TTAA 1 cut(s) 927
SatI GCNGC 7 cut(s) 184, 234, 306, 493, 532, 608, 829
Sau3AI GATC 6 cut(s) 106, 274, 486, 585, 732, 792
Sau96I GGNCC 4 cut(s) 9, 303, 421, 596
ScaI AGTACT 1 cut(s) 722
SchI GAGTC 3 cut(s) 595, 626, 695
SduI GDGCHC 3 cut(s) 265, 354, 527
SfaNI GCATC 2 cut(s) 50, 195
SfoI GGCGCC 1 cut(s) 832
Sfr274I CTCGAG 1 cut(s) 659
SgrAI CRCCGGYG 1 cut(s) 527
SinI GGWCC 2 cut(s) 9, 596
SlaI CTCGAG 1 cut(s) 659
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
SpeI ACTAGT 1 cut(s) 854
Sse9I AATT 6 cut(s) 92, 754, 767, 787, 846, 924
SsiI CCGC 8 cut(s) 102, 306, 402, 424, 531, 608, 636, 828
SspDI GGCGCC 1 cut(s) 830
SspMI CTAG 1 cut(s) 855
SstI GAGCTC 2 cut(s) 265, 354
StyI CCWWGG 2 cut(s) 336, 405
TaaI ACNGT 1 cut(s) 149
TaiI ACGT 4 cut(s) 173, 214, 740, 806
TaqI TCGA 6 cut(s) 167, 342, 468, 630, 660, 717
TaqII GACCGA 1 cut(s) 613
TasI AATT 6 cut(s) 92, 754, 767, 787, 846, 924
TatI WGTACW 2 cut(s) 327, 720
TauI GCSGC 4 cut(s) 308, 534, 610, 831
TfiI GAWTC 6 cut(s) 205, 382, 655, 679, 745, 836
Tru1I TTAA 1 cut(s) 927
Tru9I TTAA 1 cut(s) 927
TseFI GTSAC 2 cut(s) 175, 548
TseI GCWGC 3 cut(s) 183, 233, 492
Tsp45I GTSAC 2 cut(s) 175, 548
TspDTI ATGAA 5 cut(s) 144, 385, 418, 524, 796
TspGWI ACGGA 1 cut(s) 738
Tth111I GACNNNGTC 1 cut(s) 149
VpaK11BI GGWCC 2 cut(s) 9, 596
XceI RCATGY 2 cut(s) 138, 712
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
XhoI CTCGAG 1 cut(s) 659
XspI CTAG 1 cut(s) 855
ZrmI AGTACT 1 cut(s) 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.