mediator of RNA polymerase II transcription subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| KIX_2 | PF16987 | 51 - 114 | 1.8e-15 | KIX domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 427 |
| AciI | CCGC | 7 cut(s) | 392, 427, 692, 1226, 1274, 1702, 1820 |
| AclWI | GGATC | 5 cut(s) | 1430, 1443, 1492, 1911, 1929 |
| AcoI | YGGCCR | 1 cut(s) | 273 |
| AcsI | RAATTY | 9 cut(s) | 178, 553, 709, 766, 1133, 1291, 1351, 1531, 1600 |
| AcuI | CTGAAG | 4 cut(s) | 950, 1577, 1628, 1676 |
| AdeI | CACNNNGTG | 1 cut(s) | 1556 |
| AfaI | GTAC | 3 cut(s) | 341, 920, 1426 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 59, 1001, 1077, 1445, 1945 |
| AjnI | CCWGG | 2 cut(s) | 508, 1438 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1088, 1120 |
| AluBI | AGCT | 9 cut(s) | 352, 439, 526, 643, 1009, 1018, 1189, 1570, 1642 |
| AluI | AGCT | 9 cut(s) | 352, 439, 526, 643, 1009, 1018, 1189, 1570, 1642 |
| Alw26I | GTCTC | 2 cut(s) | 675, 1257 |
| AlwI | GGATC | 5 cut(s) | 1430, 1443, 1492, 1911, 1929 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 643 |
| Ama87I | CYCGRG | 3 cut(s) | 45, 347, 1371 |
| AoxI | GGCC | 2 cut(s) | 273, 2013 |
| ApoI | RAATTY | 9 cut(s) | 178, 553, 709, 766, 1133, 1291, 1351, 1531, 1600 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1529, 1561 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1848 |
| AspLEI | GCGC | 2 cut(s) | 468, 1047 |
| AspS9I | GGNCC | 2 cut(s) | 572, 1301 |
| AsuC2I | CCSGG | 2 cut(s) | 1002, 1811 |
| AsuHPI | GGTGA | 2 cut(s) | 498, 1077 |
| AsuII | TTCGAA | 1 cut(s) | 1535 |
| AvaI | CYCGRG | 3 cut(s) | 45, 347, 1371 |
| AvaII | GGWCC | 2 cut(s) | 572, 1301 |
| BamHI | GGATCC | 1 cut(s) | 1435 |
| BanII | GRGCYC | 2 cut(s) | 52, 847 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 323, 355, 902, 934 |
| BauI | CACGAG | 2 cut(s) | 245, 672 |
| BbsI | GAAGAC | 1 cut(s) | 1353 |
| BccI | CCATC | 3 cut(s) | 83, 136, 1894 |
| BceAI | ACGGC | 1 cut(s) | 260 |
| BciT130I | CCWGG | 2 cut(s) | 510, 1440 |
| BcnI | CCSGG | 2 cut(s) | 1002, 1811 |
| BcoDI | GTCTC | 2 cut(s) | 675, 1257 |
| BfaI | CTAG | 3 cut(s) | 777, 833, 1089 |
| BfmI | CTRYAG | 2 cut(s) | 1571, 1712 |
| BfoI | RGCGCY | 2 cut(s) | 469, 1048 |
| Bme1390I | CCNGG | 4 cut(s) | 510, 1002, 1440, 1811 |
| Bme18I | GGWCC | 2 cut(s) | 572, 1301 |
| BmeT110I | CYCGRG | 3 cut(s) | 45, 347, 1371 |
| BmgT120I | GGNCC | 2 cut(s) | 572, 1301 |
| BmiI | GGNNCC | 2 cut(s) | 51, 1437 |
| BmrFI | CCNGG | 4 cut(s) | 510, 1002, 1440, 1811 |
| BmsI | GCATC | 3 cut(s) | 798, 1206, 1765 |
| BpiI | GAAGAC | 1 cut(s) | 1353 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 154, 186 |
| BpmI | CTGGAG | 1 cut(s) | 178 |
| Bpu14I | TTCGAA | 1 cut(s) | 1535 |
| BpuEI | CTTGAG | 5 cut(s) | 39, 452, 645, 1031, 1227 |
| BpuMI | CCSGG | 2 cut(s) | 1002, 1811 |
| BsaJI | CCNNGG | 5 cut(s) | 44, 575, 593, 803, 1001 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 59, 1001, 1077, 1445, 1945 |
| Bse1I | ACTGG | 2 cut(s) | 161, 856 |
| Bse3DI | GCAATG | 3 cut(s) | 731, 1412, 1905 |
| BseBI | CCWGG | 2 cut(s) | 510, 1440 |
| BseDI | CCNNGG | 5 cut(s) | 44, 575, 593, 803, 1001 |
| BseGI | GGATG | 2 cut(s) | 226, 813 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 59, 1001, 1077, 1445, 1945 |
| BseMI | GCAATG | 3 cut(s) | 731, 1412, 1905 |
| BseNI | ACTGG | 2 cut(s) | 161, 856 |
| BseRI | GAGGAG | 5 cut(s) | 42, 175, 582, 896, 1161 |
| BseYI | CCCAGC | 1 cut(s) | 526 |
| BsgI | GTGCAG | 2 cut(s) | 686, 1268 |
| BshFI | GGCC | 2 cut(s) | 275, 2015 |
| BsiHKCI | CYCGRG | 3 cut(s) | 45, 347, 1371 |
| BsiSI | CCGG | 2 cut(s) | 1001, 1811 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 59, 1001, 1077, 1445, 1945 |
| BsmAI | GTCTC | 2 cut(s) | 675, 1257 |
| BsmI | GAATGC | 1 cut(s) | 1543 |
| BsnI | GGCC | 2 cut(s) | 275, 2015 |
| BsoBI | CYCGRG | 3 cut(s) | 45, 347, 1371 |
| Bsp119I | TTCGAA | 1 cut(s) | 1535 |
| Bsp1286I | GDGCHC | 2 cut(s) | 52, 847 |
| Bsp143I | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| Bsp19I | CCATGG | 1 cut(s) | 803 |
| BspACI | CCGC | 7 cut(s) | 392, 427, 692, 1226, 1274, 1702, 1820 |
| BspANI | GGCC | 2 cut(s) | 275, 2015 |
| BspHI | TCATGA | 2 cut(s) | 906, 1255 |
| BspLI | GGNNCC | 2 cut(s) | 51, 1437 |
| BspMAI | CTGCAG | 1 cut(s) | 1575 |
| BspPI | GGATC | 5 cut(s) | 1430, 1443, 1492, 1911, 1929 |
| BspT104I | TTCGAA | 1 cut(s) | 1535 |
| BsrBI | CCGCTC | 1 cut(s) | 427 |
| BsrDI | GCAATG | 3 cut(s) | 731, 1412, 1905 |
| BsrI | ACTGG | 2 cut(s) | 161, 856 |
| BssECI | CCNNGG | 5 cut(s) | 44, 575, 593, 803, 1001 |
| BssMI | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| BssSI | CACGAG | 2 cut(s) | 245, 672 |
| BssT1I | CCWWGG | 1 cut(s) | 803 |
| Bst2BI | CACGAG | 2 cut(s) | 245, 672 |
| Bst2UI | CCWGG | 2 cut(s) | 510, 1440 |
| Bst4CI | ACNGT | 2 cut(s) | 149, 1665 |
| Bst6I | CTCTTC | 4 cut(s) | 177, 215, 408, 987 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 634, 643 |
| BstBI | TTCGAA | 1 cut(s) | 1535 |
| BstC8I | GCNNGC | 3 cut(s) | 758, 1822, 2013 |
| BstDEI | CTNAG | 2 cut(s) | 353, 932 |
| BstDSI | CCRYGG | 1 cut(s) | 803 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1943 |
| BstF5I | GGATG | 2 cut(s) | 226, 813 |
| BstH2I | RGCGCY | 2 cut(s) | 469, 1048 |
| BstHHI | GCGC | 2 cut(s) | 468, 1047 |
| BstKTI | GATC | 5 cut(s) | 321, 1438, 1487, 1906, 1937 |
| BstMAI | GTCTC | 2 cut(s) | 675, 1257 |
| BstMBI | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| BstNI | CCWGG | 2 cut(s) | 510, 1440 |
| BstNSI | RCATGY | 2 cut(s) | 860, 1756 |
| BstSCI | CCNGG | 4 cut(s) | 508, 1000, 1438, 1809 |
| BstSFI | CTRYAG | 2 cut(s) | 1571, 1712 |
| BstV2I | GAAGAC | 1 cut(s) | 1353 |
| BstX2I | RGATCY | 3 cut(s) | 1435, 1484, 1934 |
| BstYI | RGATCY | 3 cut(s) | 1435, 1484, 1934 |
| BsuRI | GGCC | 2 cut(s) | 275, 2015 |
| BtgI | CCRYGG | 1 cut(s) | 803 |
| BtsCI | GGATG | 2 cut(s) | 226, 813 |
| BtsIMutI | CAGTG | 3 cut(s) | 154, 1454, 1670 |
| Cac8I | GCNNGC | 3 cut(s) | 758, 1822, 2013 |
| CaiI | CAGNNNCTG | 1 cut(s) | 643 |
| CciI | TCATGA | 2 cut(s) | 906, 1255 |
| CfoI | GCGC | 2 cut(s) | 468, 1047 |
| Cfr13I | GGNCC | 2 cut(s) | 572, 1301 |
| CseI | GACGC | 1 cut(s) | 1871 |
| CsiI | ACCWGGT | 1 cut(s) | 508 |
| Csp6I | GTAC | 3 cut(s) | 340, 919, 1425 |
| CviQI | GTAC | 3 cut(s) | 340, 919, 1425 |
| DdeI | CTNAG | 2 cut(s) | 353, 932 |
| DpnI | GATC | 5 cut(s) | 320, 1437, 1486, 1905, 1936 |
| DpnII | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| DraIII | CACNNNGTG | 1 cut(s) | 1556 |
| EaeI | YGGCCR | 1 cut(s) | 273 |
| Eam1104I | CTCTTC | 4 cut(s) | 177, 215, 408, 987 |
| EarI | CTCTTC | 4 cut(s) | 177, 215, 408, 987 |
| Eco130I | CCWWGG | 1 cut(s) | 803 |
| Eco24I | GRGCYC | 2 cut(s) | 52, 847 |
| Eco47I | GGWCC | 2 cut(s) | 572, 1301 |
| Eco57I | CTGAAG | 4 cut(s) | 950, 1577, 1628, 1676 |
| Eco88I | CYCGRG | 3 cut(s) | 45, 347, 1371 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1943 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1301 |
| EcoRI | GAATTC | 1 cut(s) | 1531 |
| EcoRII | CCWGG | 2 cut(s) | 508, 1438 |
| EcoT14I | CCWWGG | 1 cut(s) | 803 |
| EcoT22I | ATGCAT | 4 cut(s) | 6, 813, 1758, 2036 |
| EcoT38I | GRGCYC | 2 cut(s) | 52, 847 |
| ErhI | CCWWGG | 1 cut(s) | 803 |
| FauI | CCCGC | 3 cut(s) | 699, 1281, 1813 |
| FauNDI | CATATG | 2 cut(s) | 624, 1203 |
| FokI | GGATG | 2 cut(s) | 213, 820 |
| FriOI | GRGCYC | 2 cut(s) | 52, 847 |
| FspBI | CTAG | 3 cut(s) | 777, 833, 1089 |
| GlaI | GCGC | 2 cut(s) | 467, 1046 |
| GsaI | CCCAGC | 1 cut(s) | 530 |
| GsuI | CTGGAG | 1 cut(s) | 178 |
| HaeII | RGCGCY | 2 cut(s) | 469, 1048 |
| HaeIII | GGCC | 2 cut(s) | 275, 2015 |
| HapII | CCGG | 2 cut(s) | 1001, 1811 |
| HgaI | GACGC | 1 cut(s) | 1871 |
| HhaI | GCGC | 2 cut(s) | 468, 1047 |
| Hin6I | GCGC | 2 cut(s) | 466, 1045 |
| HinP1I | GCGC | 2 cut(s) | 466, 1045 |
| HincII | GTYRAC | 1 cut(s) | 1670 |
| HindII | GTYRAC | 1 cut(s) | 1670 |
| HindIII | AAGCTT | 1 cut(s) | 1640 |
| HinfI | GANTC | 9 cut(s) | 40, 163, 223, 398, 541, 872, 977, 1408, 1648 |
| HpaII | CCGG | 2 cut(s) | 1001, 1811 |
| HphI | GGTGA | 2 cut(s) | 498, 1077 |
| Hpy166II | GTNNAC | 2 cut(s) | 1525, 1670 |
| Hpy188I | TCNGA | 7 cut(s) | 16, 31, 424, 546, 948, 1647, 1788 |
| Hpy188III | TCNNGA | 8 cut(s) | 139, 183, 245, 265, 674, 833, 907, 1256 |
| Hpy8I | GTNNAC | 2 cut(s) | 1525, 1670 |
| Hpy99I | CGWCG | 1 cut(s) | 113 |
| HpyAV | CCTTC | 4 cut(s) | 240, 325, 904, 1601 |
| HpyCH4III | ACNGT | 2 cut(s) | 149, 1665 |
| HpyCH4IV | ACGT | 2 cut(s) | 36, 281 |
| HpyF3I | CTNAG | 2 cut(s) | 353, 932 |
| HpySE526I | ACGT | 2 cut(s) | 36, 281 |
| HspAI | GCGC | 2 cut(s) | 466, 1045 |
| Kzo9I | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| LmnI | GCTCC | 4 cut(s) | 55, 463, 1042, 1194 |
| LweI | GCATC | 3 cut(s) | 798, 1206, 1765 |
| MabI | ACCWGGT | 1 cut(s) | 508 |
| MaeI | CTAG | 3 cut(s) | 777, 833, 1089 |
| MaeII | ACGT | 2 cut(s) | 36, 281 |
| MaeIII | GTNAC | 4 cut(s) | 242, 277, 955, 1731 |
| MalI | GATC | 5 cut(s) | 320, 1437, 1486, 1905, 1936 |
| MbiI | CCGCTC | 1 cut(s) | 427 |
| MboI | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| MboII | GAAGA | 8 cut(s) | 164, 232, 297, 382, 395, 809, 974, 1353 |
| MfeI | CAATTG | 1 cut(s) | 1688 |
| MflI | RGATCY | 3 cut(s) | 1435, 1484, 1934 |
| MhlI | GDGCHC | 2 cut(s) | 52, 847 |
| MlyI | GAGTC | 2 cut(s) | 172, 232 |
| MmeI | TCCRAC | 4 cut(s) | 40, 1020, 1413, 2030 |
| Mph1103I | ATGCAT | 4 cut(s) | 6, 813, 1758, 2036 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1848 |
| MseI | TTAA | 5 cut(s) | 923, 1584, 1761, 1826, 2043 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1954, 2043 |
| MspA1I | CMGCKG | 3 cut(s) | 643, 694, 1702 |
| MspI | CCGG | 2 cut(s) | 1001, 1811 |
| MspR9I | CCNGG | 4 cut(s) | 510, 1002, 1440, 1811 |
| MunI | CAATTG | 1 cut(s) | 1688 |
| Mva1269I | GAATGC | 1 cut(s) | 1543 |
| MvaI | CCWGG | 2 cut(s) | 510, 1440 |
| NciI | CCSGG | 2 cut(s) | 1002, 1811 |
| NcoI | CCATGG | 1 cut(s) | 803 |
| NdeI | CATATG | 2 cut(s) | 624, 1203 |
| NdeII | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| NlaIV | GGNNCC | 2 cut(s) | 51, 1437 |
| NmeAIII | GCCGAG | 3 cut(s) | 574, 866, 1446 |
| NmuCI | GTSAC | 3 cut(s) | 242, 277, 1731 |
| NsiI | ATGCAT | 4 cut(s) | 6, 813, 1758, 2036 |
| NspI | RCATGY | 2 cut(s) | 860, 1756 |
| NspV | TTCGAA | 1 cut(s) | 1535 |
| PagI | TCATGA | 2 cut(s) | 906, 1255 |
| PctI | GAATGC | 1 cut(s) | 1543 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1848 |
| PfeI | GAWTC | 7 cut(s) | 40, 398, 541, 872, 977, 1408, 1648 |
| PfoI | TCCNGGA | 1 cut(s) | 1438 |
| PleI | GAGTC | 2 cut(s) | 171, 231 |
| PpsI | GAGTC | 2 cut(s) | 171, 231 |
| PpuMI | RGGWCCY | 1 cut(s) | 1301 |
| Psp5II | RGGWCCY | 1 cut(s) | 1301 |
| Psp6I | CCWGG | 2 cut(s) | 508, 1438 |
| PspFI | CCCAGC | 1 cut(s) | 526 |
| PspGI | CCWGG | 2 cut(s) | 508, 1438 |
| PspN4I | GGNNCC | 2 cut(s) | 51, 1437 |
| PspPI | GGNCC | 2 cut(s) | 572, 1301 |
| PspPPI | RGGWCCY | 1 cut(s) | 1301 |
| PstI | CTGCAG | 1 cut(s) | 1575 |
| PstNI | CAGNNNCTG | 1 cut(s) | 643 |
| PsuI | RGATCY | 3 cut(s) | 1435, 1484, 1934 |
| PvuII | CAGCTG | 1 cut(s) | 643 |
| RsaI | GTAC | 3 cut(s) | 341, 920, 1426 |
| RsaNI | GTAC | 3 cut(s) | 340, 919, 1425 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1954, 2043 |
| SaqAI | TTAA | 5 cut(s) | 923, 1584, 1761, 1826, 2043 |
| Sau3AI | GATC | 5 cut(s) | 318, 1435, 1484, 1903, 1934 |
| Sau96I | GGNCC | 2 cut(s) | 572, 1301 |
| SchI | GAGTC | 2 cut(s) | 172, 232 |
| ScrFI | CCNGG | 4 cut(s) | 510, 1002, 1440, 1811 |
| SduI | GDGCHC | 2 cut(s) | 52, 847 |
| SexAI | ACCWGGT | 1 cut(s) | 508 |
| SfaNI | GCATC | 3 cut(s) | 798, 1206, 1765 |
| SfcI | CTRYAG | 2 cut(s) | 1571, 1712 |
| SfuI | TTCGAA | 1 cut(s) | 1535 |
| SinI | GGWCC | 2 cut(s) | 572, 1301 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1954, 2043 |
| SmlI | CTYRAG | 5 cut(s) | 54, 431, 660, 1010, 1242 |
| SmoI | CTYRAG | 5 cut(s) | 54, 431, 660, 1010, 1242 |
| SsiI | CCGC | 7 cut(s) | 392, 427, 692, 1226, 1274, 1702, 1820 |
| SspI | AATATT | 2 cut(s) | 748, 1582 |
| SspMI | CTAG | 3 cut(s) | 777, 833, 1089 |
| StyD4I | CCNGG | 4 cut(s) | 508, 1000, 1438, 1809 |
| StyI | CCWWGG | 1 cut(s) | 803 |
| TaaI | ACNGT | 2 cut(s) | 149, 1665 |
| TaiI | ACGT | 2 cut(s) | 39, 284 |
| TaqI | TCGA | 3 cut(s) | 140, 1214, 1535 |
| TaqII | GACCGA | 1 cut(s) | 589 |
| TatI | WGTACW | 3 cut(s) | 339, 918, 1424 |
| TauI | GCSGC | 3 cut(s) | 430, 1228, 1705 |
| TfiI | GAWTC | 7 cut(s) | 40, 398, 541, 872, 977, 1408, 1648 |
| Tru1I | TTAA | 5 cut(s) | 923, 1584, 1761, 1826, 2043 |
| Tru9I | TTAA | 5 cut(s) | 923, 1584, 1761, 1826, 2043 |
| TscAI | CASTG | 3 cut(s) | 154, 1461, 1670 |
| TseFI | GTSAC | 3 cut(s) | 242, 277, 1731 |
| Tsp45I | GTSAC | 3 cut(s) | 242, 277, 1731 |
| TspGWI | ACGGA | 1 cut(s) | 1175 |
| TspRI | CASTG | 3 cut(s) | 154, 1461, 1670 |
| VpaK11BI | GGWCC | 2 cut(s) | 572, 1301 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1943 |
| XapI | RAATTY | 9 cut(s) | 178, 553, 709, 766, 1133, 1291, 1351, 1531, 1600 |
| XbaI | TCTAGA | 1 cut(s) | 832 |
| XceI | RCATGY | 2 cut(s) | 860, 1756 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1848 |
| XspI | CTAG | 3 cut(s) | 777, 833, 1089 |
| Zsp2I | ATGCAT | 4 cut(s) | 6, 813, 1758, 2036 |