Mediator of RNA polymerase II transcription subunit 15a-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Cation_ATPase_N | PF00690 | 19 - 86 | 3.7e-19 | Cation transporter/ATPase, N-terminus |
| E1-E2_ATPase | PF00122 | 139 - 254 | 2.7e-23 | P-type ATPase actuator domain |
| Cation_ATPase | PF13246 | 430 - 629 | 3e-37 | P-type ATPase, cytoplasmic domain N |
| Hydrolase | PF00702 | 617 - 738 | 5.7e-15 | haloacid dehalogenase-like hydrolase |
| Cation_ATPase_C | PF00689 | 810 - 1035 | 1.5e-49 | Cation transporting ATPase, C-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 736, 2203 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 224 |
| AatII | GACGTC | 1 cut(s) | 69 |
| Acc36I | ACCTGC | 3 cut(s) | 736, 1755, 2203 |
| AccB1I | GGYRCC | 2 cut(s) | 457, 1559 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1933 |
| AccII | CGCG | 4 cut(s) | 102, 245, 674, 1980 |
| AccIII | TCCGGA | 1 cut(s) | 2506 |
| AclWI | GGATC | 9 cut(s) | 181, 213, 334, 578, 1802, 1865, 1878, 2576, 2789 |
| AcoI | YGGCCR | 5 cut(s) | 27, 914, 978, 1259, 2680 |
| AcsI | RAATTY | 7 cut(s) | 463, 637, 922, 929, 1663, 2039, 2418 |
| AcuI | CTGAAG | 3 cut(s) | 212, 1986, 3116 |
| AcyI | GRCGYC | 1 cut(s) | 66 |
| AdeI | CACNNNGTG | 1 cut(s) | 779 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 106, 1241, 1268, 1933, 2896 |
| AgeI | ACCGGT | 1 cut(s) | 1130 |
| AjnI | CCWGG | 4 cut(s) | 1189, 2412, 2460, 2924 |
| Alw21I | GWGCWC | 3 cut(s) | 483, 560, 2729 |
| Alw26I | GTCTC | 4 cut(s) | 281, 1085, 2068, 2965 |
| Alw44I | GTGCAC | 1 cut(s) | 2725 |
| AlwI | GGATC | 9 cut(s) | 181, 213, 334, 578, 1802, 1865, 1878, 2576, 2789 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2449 |
| Ama87I | CYCGRG | 1 cut(s) | 106 |
| Aor13HI | TCCGGA | 1 cut(s) | 2506 |
| AoxI | GGCC | 9 cut(s) | 27, 178, 914, 978, 1187, 1259, 2086, 2259, 2680 |
| ApaLI | GTGCAC | 1 cut(s) | 2725 |
| ApeKI | GCWGC | 6 cut(s) | 1078, 1382, 1686, 2137, 2408, 2762 |
| ApoI | RAATTY | 7 cut(s) | 463, 637, 922, 929, 1663, 2039, 2418 |
| AsiGI | ACCGGT | 1 cut(s) | 1130 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2039 |
| AspLEI | GCGC | 5 cut(s) | 138, 397, 1033, 1719, 3156 |
| AspS9I | GGNCC | 6 cut(s) | 178, 1657, 1744, 1888, 1997, 2474 |
| AsuC2I | CCSGG | 3 cut(s) | 140, 489, 1345 |
| AsuII | TTCGAA | 2 cut(s) | 927, 1451 |
| AvaI | CYCGRG | 1 cut(s) | 106 |
| AvaII | GGWCC | 5 cut(s) | 1657, 1744, 1888, 1997, 2474 |
| BaeGI | GKGCMC | 1 cut(s) | 2729 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1272, 1305 |
| BalI | TGGCCA | 1 cut(s) | 2682 |
| BamHI | GGATCC | 1 cut(s) | 1870 |
| BanI | GGYRCC | 2 cut(s) | 457, 1559 |
| BanII | GRGCYC | 2 cut(s) | 483, 560 |
| BauI | CACGAG | 1 cut(s) | 173 |
| BbsI | GAAGAC | 2 cut(s) | 737, 1785 |
| Bbv12I | GWGCWC | 3 cut(s) | 483, 560, 2729 |
| BbvCI | CCTCAGC | 1 cut(s) | 3029 |
| BbvI | GCAGC | 6 cut(s) | 1065, 1394, 1698, 2124, 2395, 2774 |
| BceAI | ACGGC | 5 cut(s) | 307, 324, 633, 965, 1654 |
| BciT130I | CCWGG | 4 cut(s) | 1191, 2414, 2462, 2926 |
| BciVI | GTATCC | 1 cut(s) | 1273 |
| BclI | TGATCA | 4 cut(s) | 870, 1014, 2056, 2556 |
| BcnI | CCSGG | 3 cut(s) | 140, 489, 1345 |
| BcoDI | GTCTC | 4 cut(s) | 281, 1085, 2068, 2965 |
| BfaI | CTAG | 6 cut(s) | 1097, 1185, 1704, 2100, 2492, 2535 |
| BfmI | CTRYAG | 2 cut(s) | 1008, 3138 |
| BfoI | RGCGCY | 3 cut(s) | 139, 398, 1034 |
| BfuAI | ACCTGC | 3 cut(s) | 736, 1755, 2203 |
| BfuI | GTATCC | 1 cut(s) | 1273 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 392, 986 |
| BglII | AGATCT | 3 cut(s) | 1305, 1672, 2324 |
| BlpI | GCTNAGC | 1 cut(s) | 212 |
| BmcAI | AGTACT | 1 cut(s) | 884 |
| Bme1390I | CCNGG | 7 cut(s) | 140, 489, 1191, 1345, 2414, 2462, 2926 |
| Bme18I | GGWCC | 5 cut(s) | 1657, 1744, 1888, 1997, 2474 |
| BmeT110I | CYCGRG | 1 cut(s) | 106 |
| BmgT120I | GGNCC | 6 cut(s) | 178, 1657, 1744, 1888, 1997, 2474 |
| BmiI | GGNNCC | 9 cut(s) | 321, 459, 525, 1222, 1561, 1642, 1872, 2476, 2942 |
| BmrFI | CCNGG | 7 cut(s) | 140, 489, 1191, 1345, 2414, 2462, 2926 |
| BmsI | GCATC | 3 cut(s) | 1315, 2179, 2759 |
| BpiI | GAAGAC | 2 cut(s) | 737, 1785 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1601, 1633 |
| BpmI | CTGGAG | 2 cut(s) | 185, 419 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3029 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 212 |
| Bpu14I | TTCGAA | 2 cut(s) | 927, 1451 |
| BpuEI | CTTGAG | 3 cut(s) | 863, 1532, 2991 |
| BpuMI | CCSGG | 3 cut(s) | 140, 489, 1345 |
| BsaAI | YACGTR | 2 cut(s) | 951, 2992 |
| BsaBI | GATNNNNATC | 2 cut(s) | 302, 344 |
| BsaHI | GRCGYC | 1 cut(s) | 66 |
| BsaI | GGTCTC | 1 cut(s) | 281 |
| BsaJI | CCNNGG | 9 cut(s) | 981, 1536, 2111, 2226, 2412, 2413, 2924, 2925, 2936 |
| BsaWI | WCCGGW | 4 cut(s) | 590, 1130, 1562, 2506 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 404, 434, 483, 513, 2586, 2616 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 106, 1241, 1268, 1933, 2896 |
| Bse118I | RCCGGY | 3 cut(s) | 290, 1130, 1264 |
| Bse1I | ACTGG | 9 cut(s) | 168, 181, 1262, 1362, 1561, 2176, 2438, 2720, 3071 |
| Bse3DI | GCAATG | 3 cut(s) | 1644, 1712, 2232 |
| Bse8I | GATNNNNATC | 2 cut(s) | 302, 344 |
| BseAI | TCCGGA | 1 cut(s) | 2506 |
| BseBI | CCWGG | 4 cut(s) | 1191, 2414, 2462, 2926 |
| BseDI | CCNNGG | 9 cut(s) | 981, 1536, 2111, 2226, 2412, 2413, 2924, 2925, 2936 |
| BseGI | GGATG | 5 cut(s) | 158, 732, 1619, 1783, 2750 |
| BseJI | GATNNNNATC | 2 cut(s) | 302, 344 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 106, 1241, 1268, 1933, 2896 |
| BseMI | GCAATG | 3 cut(s) | 1644, 1712, 2232 |
| BseNI | ACTGG | 9 cut(s) | 168, 181, 1262, 1362, 1561, 2176, 2438, 2720, 3071 |
| BseRI | GAGGAG | 1 cut(s) | 299 |
| BseSI | GKGCMC | 1 cut(s) | 2729 |
| BseXI | GCAGC | 6 cut(s) | 1065, 1394, 1698, 2124, 2395, 2774 |
| BseYI | CCCAGC | 3 cut(s) | 894, 2237, 2479 |
| BsgI | GTGCAG | 1 cut(s) | 1611 |
| Bsh1236I | CGCG | 4 cut(s) | 102, 245, 674, 1980 |
| Bsh1285I | CGRYCG | 1 cut(s) | 360 |
| BshFI | GGCC | 9 cut(s) | 29, 180, 916, 980, 1189, 1261, 2088, 2261, 2682 |
| BshNI | GGYRCC | 2 cut(s) | 457, 1559 |
| BshTI | ACCGGT | 1 cut(s) | 1130 |
| BsiEI | CGRYCG | 1 cut(s) | 360 |
| BsiHKAI | GWGCWC | 3 cut(s) | 483, 560, 2729 |
| BsiHKCI | CYCGRG | 1 cut(s) | 106 |
| BslFI | GGGAC | 4 cut(s) | 458, 1051, 2254, 3008 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 106, 1241, 1268, 1933, 2896 |
| BsmAI | GTCTC | 4 cut(s) | 281, 1085, 2068, 2965 |
| BsmFI | GGGAC | 4 cut(s) | 458, 1051, 2254, 3008 |
| BsmI | GAATGC | 5 cut(s) | 80, 358, 751, 1066, 1374 |
| BsnI | GGCC | 9 cut(s) | 29, 180, 916, 980, 1189, 1261, 2088, 2261, 2682 |
| Bso31I | GGTCTC | 1 cut(s) | 281 |
| BsoBI | CYCGRG | 1 cut(s) | 106 |
| Bsp119I | TTCGAA | 2 cut(s) | 927, 1451 |
| Bsp1286I | GDGCHC | 3 cut(s) | 483, 560, 2729 |
| Bsp13I | TCCGGA | 1 cut(s) | 2506 |
| Bsp1407I | TGTACA | 1 cut(s) | 3113 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 212 |
| Bsp19I | CCATGG | 3 cut(s) | 1536, 2226, 2936 |
| BspANI | GGCC | 9 cut(s) | 29, 180, 916, 980, 1189, 1261, 2088, 2261, 2682 |
| BspEI | TCCGGA | 1 cut(s) | 2506 |
| BspFNI | CGCG | 4 cut(s) | 102, 245, 674, 1980 |
| BspHI | TCATGA | 1 cut(s) | 1693 |
| BspLI | GGNNCC | 9 cut(s) | 321, 459, 525, 1222, 1561, 1642, 1872, 2476, 2942 |
| BspMAI | CTGCAG | 1 cut(s) | 1012 |
| BspMI | ACCTGC | 3 cut(s) | 736, 1755, 2203 |
| BspPI | GGATC | 9 cut(s) | 181, 213, 334, 578, 1802, 1865, 1878, 2576, 2789 |
| BspT104I | TTCGAA | 2 cut(s) | 927, 1451 |
| BspT107I | GGYRCC | 2 cut(s) | 457, 1559 |
| BspTNI | GGTCTC | 1 cut(s) | 281 |
| BsrDI | GCAATG | 3 cut(s) | 1644, 1712, 2232 |
| BsrFI | RCCGGY | 3 cut(s) | 290, 1130, 1264 |
| BsrGI | TGTACA | 1 cut(s) | 3113 |
| BsrI | ACTGG | 9 cut(s) | 168, 181, 1262, 1362, 1561, 2176, 2438, 2720, 3071 |
| BssAI | RCCGGY | 3 cut(s) | 290, 1130, 1264 |
| BssECI | CCNNGG | 9 cut(s) | 981, 1536, 2111, 2226, 2412, 2413, 2924, 2925, 2936 |
| BssNI | GRCGYC | 1 cut(s) | 66 |
| BssSI | CACGAG | 1 cut(s) | 173 |
| BssT1I | CCWWGG | 4 cut(s) | 1536, 2111, 2226, 2936 |
| Bst2BI | CACGAG | 1 cut(s) | 173 |
| Bst2UI | CCWGG | 4 cut(s) | 1191, 2414, 2462, 2926 |
| Bst4CI | ACNGT | 6 cut(s) | 565, 685, 1111, 1523, 2617, 2903 |
| Bst6I | CTCTTC | 2 cut(s) | 1203, 1828 |
| BstACI | GRCGYC | 1 cut(s) | 66 |
| BstAUI | TGTACA | 1 cut(s) | 3113 |
| BstBAI | YACGTR | 2 cut(s) | 951, 2992 |
| BstBI | TTCGAA | 2 cut(s) | 927, 1451 |
| BstC8I | GCNNGC | 5 cut(s) | 429, 1004, 1008, 1266, 2972 |
| BstDSI | CCRYGG | 4 cut(s) | 981, 1536, 2226, 2936 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2894 |
| BstF5I | GGATG | 5 cut(s) | 158, 732, 1619, 1783, 2750 |
| BstFNI | CGCG | 4 cut(s) | 102, 245, 674, 1980 |
| BstH2I | RGCGCY | 3 cut(s) | 139, 398, 1034 |
| BstHHI | GCGC | 5 cut(s) | 138, 397, 1033, 1719, 3156 |
| BstMAI | GTCTC | 4 cut(s) | 281, 1085, 2068, 2965 |
| BstMCI | CGRYCG | 1 cut(s) | 360 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 392, 401, 986, 2258 |
| BstNI | CCWGG | 4 cut(s) | 1191, 2414, 2462, 2926 |
| BstNSI | RCATGY | 1 cut(s) | 706 |
| BstSCI | CCNGG | 7 cut(s) | 138, 487, 1189, 1343, 2412, 2460, 2924 |
| BstSFI | CTRYAG | 2 cut(s) | 1008, 3138 |
| BstSLI | GKGCMC | 1 cut(s) | 2729 |
| BstSNI | TACGTA | 1 cut(s) | 951 |
| BstUI | CGCG | 4 cut(s) | 102, 245, 674, 1980 |
| BstV1I | GCAGC | 6 cut(s) | 1065, 1394, 1698, 2124, 2395, 2774 |
| BstV2I | GAAGAC | 2 cut(s) | 737, 1785 |
| BstX2I | RGATCY | 6 cut(s) | 1305, 1672, 1870, 2324, 2568, 2794 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1027 |
| BstYI | RGATCY | 6 cut(s) | 1305, 1672, 1870, 2324, 2568, 2794 |
| BsuI | GTATCC | 1 cut(s) | 1273 |
| BsuRI | GGCC | 9 cut(s) | 29, 180, 916, 980, 1189, 1261, 2088, 2261, 2682 |
| BtgI | CCRYGG | 4 cut(s) | 981, 1536, 2226, 2936 |
| BtsCI | GGATG | 5 cut(s) | 158, 732, 1619, 1783, 2750 |
| BtsI | GCAGTG | 1 cut(s) | 1017 |
| BtsIMutI | CAGTG | 4 cut(s) | 1017, 1369, 2566, 2856 |
| BveI | ACCTGC | 3 cut(s) | 736, 1755, 2203 |
| Cac8I | GCNNGC | 5 cut(s) | 429, 1004, 1008, 1266, 2972 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2449 |
| CciI | TCATGA | 1 cut(s) | 1693 |
| CfoI | GCGC | 5 cut(s) | 138, 397, 1033, 1719, 3156 |
| Cfr10I | RCCGGY | 3 cut(s) | 290, 1130, 1264 |
| Cfr13I | GGNCC | 6 cut(s) | 178, 1657, 1744, 1888, 1997, 2474 |
| CseI | GACGC | 1 cut(s) | 2798 |
| CsiI | ACCWGGT | 1 cut(s) | 2460 |
| CspAI | ACCGGT | 1 cut(s) | 1130 |
| DraIII | CACNNNGTG | 1 cut(s) | 779 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 224 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 224 |
| EaeI | YGGCCR | 5 cut(s) | 27, 914, 978, 1259, 2680 |
| Eam1104I | CTCTTC | 2 cut(s) | 1203, 1828 |
| EarI | CTCTTC | 2 cut(s) | 1203, 1828 |
| EciI | GGCGGA | 2 cut(s) | 545, 647 |
| Ecl136II | GAGCTC | 2 cut(s) | 481, 558 |
| Eco105I | TACGTA | 1 cut(s) | 951 |
| Eco130I | CCWWGG | 4 cut(s) | 1536, 2111, 2226, 2936 |
| Eco147I | AGGCCT | 3 cut(s) | 1189, 2088, 2261 |
| Eco24I | GRGCYC | 2 cut(s) | 483, 560 |
| Eco31I | GGTCTC | 1 cut(s) | 281 |
| Eco47I | GGWCC | 5 cut(s) | 1657, 1744, 1888, 1997, 2474 |
| Eco53kI | GAGCTC | 2 cut(s) | 481, 558 |
| Eco57I | CTGAAG | 3 cut(s) | 212, 1986, 3116 |
| Eco88I | CYCGRG | 1 cut(s) | 106 |
| EcoICRI | GAGCTC | 2 cut(s) | 481, 558 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2894 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1744 |
| EcoRI | GAATTC | 3 cut(s) | 637, 2039, 2418 |
| EcoRII | CCWGG | 4 cut(s) | 1189, 2412, 2460, 2924 |
| EcoT14I | CCWWGG | 4 cut(s) | 1536, 2111, 2226, 2936 |
| EcoT38I | GRGCYC | 2 cut(s) | 483, 560 |
| ErhI | CCWWGG | 4 cut(s) | 1536, 2111, 2226, 2936 |
| FaqI | GGGAC | 4 cut(s) | 458, 1051, 2254, 3008 |
| FauI | CCCGC | 1 cut(s) | 667 |
| FauNDI | CATATG | 1 cut(s) | 1275 |
| FbaI | TGATCA | 4 cut(s) | 870, 1014, 2056, 2556 |
| FokI | GGATG | 5 cut(s) | 165, 739, 1606, 1770, 2737 |
| FriOI | GRGCYC | 2 cut(s) | 483, 560 |
| FspBI | CTAG | 6 cut(s) | 1097, 1185, 1704, 2100, 2492, 2535 |
| GlaI | GCGC | 5 cut(s) | 137, 396, 1032, 1718, 3155 |
| GsaI | CCCAGC | 3 cut(s) | 898, 2241, 2483 |
| GsuI | CTGGAG | 2 cut(s) | 185, 419 |
| HaeII | RGCGCY | 3 cut(s) | 139, 398, 1034 |
| HaeIII | GGCC | 9 cut(s) | 29, 180, 916, 980, 1189, 1261, 2088, 2261, 2682 |
| HgaI | GACGC | 1 cut(s) | 2798 |
| HhaI | GCGC | 5 cut(s) | 138, 397, 1033, 1719, 3156 |
| Hin1I | GRCGYC | 1 cut(s) | 66 |
| Hin6I | GCGC | 5 cut(s) | 136, 395, 1031, 1717, 3154 |
| HinP1I | GCGC | 5 cut(s) | 136, 395, 1031, 1717, 3154 |
| HincII | GTYRAC | 2 cut(s) | 588, 2458 |
| HindII | GTYRAC | 2 cut(s) | 588, 2458 |
| HindIII | AAGCTT | 3 cut(s) | 1166, 2023, 2346 |
| Hpy166II | GTNNAC | 9 cut(s) | 148, 588, 691, 948, 1838, 2458, 2640, 2727, 2781 |
| Hpy8I | GTNNAC | 9 cut(s) | 148, 588, 691, 948, 1838, 2458, 2640, 2727, 2781 |
| Hpy99I | CGWCG | 5 cut(s) | 121, 365, 565, 685, 922 |
| HpyCH4III | ACNGT | 6 cut(s) | 565, 685, 1111, 1523, 2617, 2903 |
| HpyCH4IV | ACGT | 4 cut(s) | 66, 950, 2080, 2991 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 392, 401, 986, 2258 |
| HpySE526I | ACGT | 4 cut(s) | 66, 950, 2080, 2991 |
| Hsp92I | GRCGYC | 1 cut(s) | 66 |
| HspAI | GCGC | 5 cut(s) | 136, 395, 1031, 1717, 3154 |
| Kpn2I | TCCGGA | 1 cut(s) | 2506 |
| KroI | GCCGGC | 1 cut(s) | 1264 |
| KroNI | GCCGGC | 1 cut(s) | 1266 |
| Ksp22I | TGATCA | 4 cut(s) | 870, 1014, 2056, 2556 |
| LmnI | GCTCC | 8 cut(s) | 201, 319, 424, 478, 502, 1609, 1646, 2946 |
| Lsp1109I | GCAGC | 6 cut(s) | 1065, 1394, 1698, 2124, 2395, 2774 |
| LweI | GCATC | 3 cut(s) | 1315, 2179, 2759 |
| MabI | ACCWGGT | 1 cut(s) | 2460 |
| MaeI | CTAG | 6 cut(s) | 1097, 1185, 1704, 2100, 2492, 2535 |
| MaeII | ACGT | 4 cut(s) | 66, 950, 2080, 2991 |
| MaeIII | GTNAC | 4 cut(s) | 712, 1523, 2464, 2692 |
| MfeI | CAATTG | 2 cut(s) | 1827, 1899 |
| MflI | RGATCY | 6 cut(s) | 1305, 1672, 1870, 2324, 2568, 2794 |
| MhlI | GDGCHC | 3 cut(s) | 483, 560, 2729 |
| MlsI | TGGCCA | 1 cut(s) | 2682 |
| MluNI | TGGCCA | 1 cut(s) | 2682 |
| MlyI | GAGTC | 8 cut(s) | 50, 98, 519, 709, 1087, 1357, 2543, 2604 |
| MmeI | TCCRAC | 6 cut(s) | 99, 343, 402, 1839, 2293, 2778 |
| Mox20I | TGGCCA | 1 cut(s) | 2682 |
| MroI | TCCGGA | 1 cut(s) | 2506 |
| MroNI | GCCGGC | 1 cut(s) | 1264 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2039 |
| MscI | TGGCCA | 1 cut(s) | 2682 |
| MseI | TTAA | 4 cut(s) | 2027, 2826, 2931, 3080 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2052, 2867 |
| Msp20I | TGGCCA | 1 cut(s) | 2682 |
| MspA1I | CMGCKG | 5 cut(s) | 894, 1964, 2408, 2765, 3137 |
| MspR9I | CCNGG | 7 cut(s) | 140, 489, 1191, 1345, 2414, 2462, 2926 |
| MunI | CAATTG | 2 cut(s) | 1827, 1899 |
| Mva1269I | GAATGC | 5 cut(s) | 80, 358, 751, 1066, 1374 |
| MvaI | CCWGG | 4 cut(s) | 1191, 2414, 2462, 2926 |
| MvnI | CGCG | 4 cut(s) | 102, 245, 674, 1980 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 392, 401, 986, 2258 |
| NaeI | GCCGGC | 1 cut(s) | 1266 |
| NciI | CCSGG | 3 cut(s) | 140, 489, 1345 |
| NcoI | CCATGG | 3 cut(s) | 1536, 2226, 2936 |
| NdeI | CATATG | 1 cut(s) | 1275 |
| NgoMIV | GCCGGC | 1 cut(s) | 1264 |
| NlaIV | GGNNCC | 9 cut(s) | 321, 459, 525, 1222, 1561, 1642, 1872, 2476, 2942 |
| NmeAIII | GCCGAG | 2 cut(s) | 412, 1107 |
| NmuCI | GTSAC | 3 cut(s) | 712, 1523, 2692 |
| NspI | RCATGY | 1 cut(s) | 706 |
| NspV | TTCGAA | 2 cut(s) | 927, 1451 |
| PagI | TCATGA | 1 cut(s) | 1693 |
| PaqCI | CACCTGC | 2 cut(s) | 736, 2203 |
| PasI | CCCWGGG | 2 cut(s) | 2413, 2925 |
| PceI | AGGCCT | 3 cut(s) | 1189, 2088, 2261 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 50, 113, 156, 273 |
| PctI | GAATGC | 5 cut(s) | 80, 358, 751, 1066, 1374 |
| PdiI | GCCGGC | 1 cut(s) | 1266 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2039 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1933 |
| PfoI | TCCNGGA | 2 cut(s) | 487, 1343 |
| PinAI | ACCGGT | 1 cut(s) | 1130 |
| Ple19I | CGATCG | 1 cut(s) | 360 |
| PleI | GAGTC | 8 cut(s) | 49, 98, 518, 709, 1087, 1356, 2543, 2603 |
| PpsI | GAGTC | 8 cut(s) | 49, 98, 518, 709, 1087, 1356, 2543, 2603 |
| Ppu21I | YACGTR | 2 cut(s) | 951, 2992 |
| PpuMI | RGGWCCY | 1 cut(s) | 1744 |
| Psp124BI | GAGCTC | 2 cut(s) | 483, 560 |
| Psp5II | RGGWCCY | 1 cut(s) | 1744 |
| Psp6I | CCWGG | 4 cut(s) | 1189, 2412, 2460, 2924 |
| PspFI | CCCAGC | 3 cut(s) | 894, 2237, 2479 |
| PspGI | CCWGG | 4 cut(s) | 1189, 2412, 2460, 2924 |
| PspN4I | GGNNCC | 9 cut(s) | 321, 459, 525, 1222, 1561, 1642, 1872, 2476, 2942 |
| PspPI | GGNCC | 6 cut(s) | 178, 1657, 1744, 1888, 1997, 2474 |
| PspPPI | RGGWCCY | 1 cut(s) | 1744 |
| PstI | CTGCAG | 1 cut(s) | 1012 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2449 |
| PsuI | RGATCY | 6 cut(s) | 1305, 1672, 1870, 2324, 2568, 2794 |
| PvuI | CGATCG | 1 cut(s) | 360 |
| PvuII | CAGCTG | 4 cut(s) | 894, 1964, 2408, 2765 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2052, 2867 |
| SacI | GAGCTC | 2 cut(s) | 483, 560 |
| SaqAI | TTAA | 4 cut(s) | 2027, 2826, 2931, 3080 |
| Sau96I | GGNCC | 6 cut(s) | 178, 1657, 1744, 1888, 1997, 2474 |
| ScaI | AGTACT | 1 cut(s) | 884 |
| SchI | GAGTC | 8 cut(s) | 50, 98, 519, 709, 1087, 1357, 2543, 2604 |
| ScrFI | CCNGG | 7 cut(s) | 140, 489, 1191, 1345, 2414, 2462, 2926 |
| SduI | GDGCHC | 3 cut(s) | 483, 560, 2729 |
| SexAI | ACCWGGT | 1 cut(s) | 2460 |
| SfaNI | GCATC | 3 cut(s) | 1315, 2179, 2759 |
| SfcI | CTRYAG | 2 cut(s) | 1008, 3138 |
| SfuI | TTCGAA | 2 cut(s) | 927, 1451 |
| SinI | GGWCC | 5 cut(s) | 1657, 1744, 1888, 1997, 2474 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2052, 2867 |
| SmlI | CTYRAG | 3 cut(s) | 878, 1511, 3006 |
| SmoI | CTYRAG | 3 cut(s) | 878, 1511, 3006 |
| SnaBI | TACGTA | 1 cut(s) | 951 |
| SseBI | AGGCCT | 3 cut(s) | 1189, 2088, 2261 |
| SspMI | CTAG | 6 cut(s) | 1097, 1185, 1704, 2100, 2492, 2535 |
| SstI | GAGCTC | 2 cut(s) | 483, 560 |
| StuI | AGGCCT | 3 cut(s) | 1189, 2088, 2261 |
| StyD4I | CCNGG | 7 cut(s) | 138, 487, 1189, 1343, 2412, 2460, 2924 |
| StyI | CCWWGG | 4 cut(s) | 1536, 2111, 2226, 2936 |
| TaaI | ACNGT | 6 cut(s) | 565, 685, 1111, 1523, 2617, 2903 |
| TaiI | ACGT | 4 cut(s) | 69, 953, 2083, 2994 |
| TatI | WGTACW | 3 cut(s) | 882, 1103, 3113 |
| TauI | GCSGC | 8 cut(s) | 29, 102, 248, 434, 473, 989, 1264, 1980 |
| Tru1I | TTAA | 4 cut(s) | 2027, 2826, 2931, 3080 |
| Tru9I | TTAA | 4 cut(s) | 2027, 2826, 2931, 3080 |
| TscAI | CASTG | 4 cut(s) | 1017, 1369, 2566, 2856 |
| TseFI | GTSAC | 3 cut(s) | 712, 1523, 2692 |
| TseI | GCWGC | 6 cut(s) | 1078, 1382, 1686, 2137, 2408, 2762 |
| Tsp45I | GTSAC | 3 cut(s) | 712, 1523, 2692 |
| TspDTI | ATGAA | 9 cut(s) | 743, 1682, 1710, 1791, 2032, 2357, 2358, 2617, 3054 |
| TspGWI | ACGGA | 4 cut(s) | 53, 165, 749, 1880 |
| TspRI | CASTG | 4 cut(s) | 1017, 1369, 2566, 2856 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1933 |
| VneI | GTGCAC | 1 cut(s) | 2725 |
| VpaK11BI | GGWCC | 5 cut(s) | 1657, 1744, 1888, 1997, 2474 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2894 |
| XapI | RAATTY | 7 cut(s) | 463, 637, 922, 929, 1663, 2039, 2418 |
| XbaI | TCTAGA | 1 cut(s) | 2099 |
| XceI | RCATGY | 1 cut(s) | 706 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1651 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2039 |
| XspI | CTAG | 6 cut(s) | 1097, 1185, 1704, 2100, 2492, 2535 |
| ZraI | GACGTC | 1 cut(s) | 67 |
| ZrmI | AGTACT | 1 cut(s) | 884 |