MD03G1258500.v1.1

Serine/threonine phosphatases, family 2C, catalytic domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
34555121 .. 34563311
8191 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1258500.v1.1.491

Sequence Viewer

Length: 3207 bp
ATGAAGGGCTCCAGACCTCACCAATTCCTCCGATTTGGATTTCTAATATTACTATTACTAGCCGCTGCGACGCCCTCTTACGCCGAATCGTCGACGTGCTTGACGGTCTACAAACAAGGTGGCGCTCCGGCGGTCTTTCAATCCCCTAAATGCCCTCGCTGGACGCACTCCGAGTATGCTTCCTCCCACTCTCGAACCACCGCCTCCCGCTGCCAGACCGCCACGCTTCAAGGCCGCCGGAAGTCTCTCGAGGATCGCACTCTCTGCTCTCTCGACGTCCGCATTCCCTTCCCTGGGAAAGTGGGGATTAAGGAGGTTACAGTGGGAATTGTTGCTGTTTTTGATGGGCATAATGGGGATGAAGCTAGTGAAATGGCTTCAAAGCTTTTGCTGGAGTATTTCATTTTGCATACGTATTTTCTCATCGATGCATCCTACTCCGCTATCTTGAAGAAAGCTTCAGGAAGTTTGCAGACTAATACAGATCATCATTTTCTTTTCCAATGGTATAATTGGGATGGCCTACTCGATCGGCATGAATTGAATCTTGGAAGGTTTAAGCATTCATTCCAAGCAAATCTTGATGATTCTTTTCACTTTGAAATTTTGAAAGAAGCATTATTGAGGGCAATTCATGATATGGATGCAAAGTTTTCTAAGGAAGCATCCAGAAAGAATCTGGTTTCGGGCTCCACAGCCACAATTGTACTACTTGCTGATGGTCAAATCTTAGTTGCAAATATTGGAGACTCAAAGGCGTTATTGTGCTCGGAAAAATTTCAATCTCATGCAGAGGCTAAAGCCGCTTATTTAAGATTATACAGGCAGGAAAGACGTAATGGTGCTCTTTCACGTCGAAGAAGCAATAAAAACCTTGACCTGGCTTCCTCCACTGGAATGGTGCATTTTTCTGTTAAAGAATTGACAAGTGATCATCATCCTGACAGATACGATGAAAAATCACGTGTGGAAACTGCGGGTGGCTATGTTATTGAATGGGGTGGTGTGCCTCGAGTAAATGGTGAGCTGGCTATTTCCAGAGCTATTGGTGACGTCTCCTTTAAAAGTTATGGCGTCATATCTGCACCTGAGTTGACTGATTGGCAACCCCTAACTGTAAATGATACCTATCTTGTGGCTGCATCTGATGGAGTTTTTGAGAAGCTGAGCGTGCAGGATGTTTGTGATTTGTTGTGGGAAGTACAGAGTTATGATTCTGGGAGATCAGAGATCTCTTCCTTGTGTTCATACTCATTAGCTGACTGCATAGTGAATACTGCATTTGAAAAGGGCAGCATGGATAACGTGGCAGCTGTTGTTGTTCCATTGGTATCTACTGGGATTTCTGGTAATCTGTTCAAGGAAAGGTCAGTTGGAGAAGGAGACACAAATTACCCAGCATTAGGACTGCAGGAGTCCACCTATGAAGGCTCAGCCAATGACTTTGCATATGACCTAAAGCAATTGAAGTATGCTCATCCAGTTGTTGCCAAGTTTGACAGGTTATTGGTAAAAGGAAAACATGGCTATGTTGGCTGTTTCTATCTATCTGAGAACCTTGATGAACATGCAGAGTACATGTTGCAAGAGAAGGATGAGCATGAATATTTTGTGTATGACCTGCCTCAGGCTCTTCCTGAGGCCTTTGACCAACAGTTTGGTGGACGTCTAAATTTGTACCATGACCAGAATTTTTGCATGTACCTTGGAATTACTGTTGACAATGCTAAAGATCAATGCACAAATCCTGAAGGCTTTGCAAGTTTTCTTGCATTGATTGAATCAGTTCCTTTCCTTGATGCTGGTTCAGCTAATGGATCTGAATATTCAATGCCTGACAGCAGGTATGTCCTAAAGAAGAGGTTTGGTCGTGGATCATATGGTGAAGTGTGGCTGGCTTTTAATTGGAACTGTCATCAAGGCAACAACACTTCAAATTCAAGCCTTCCTGATGAAAACTTGCTCATTTTAAAACGTATAATGGTGGAGAGAGGGGCTGCTGTTTACTTAAGTGGTTTACGGGAAAAATATTTTGGTGAAATTTTTCTAAATGCCTCTAGTCGTCTTGGAGGTTCTCTATCAGCTGGAACATCAACCTCTGTCTTGAATGAATCATGGTTTGATTTCTATGGCTTGTTAGAGACAACTGATTCAATGACATATGGAAGCGGAAACAGTTGGACTTTTGAGAACTTGTTCCAGGACAGATTTAGACTGCATGGAGATTTCTATGAAGAAGGGTTGAACCATATTGCTAGATATGTAGAGTCTTTTGAATCTCAAGCAAATGAAATATGGCTTGTATTTCGTTATGAGGGCGTGTCTTTATCGAAGATTATGTATACTGTGGAAGAAGATACTAATGCTGATGAAAGAGCTGAAAAAGTGAACCATGTCCAGATGCTGCGTCCATCAAAATGGTGGCATTGGTTGAAGACAACAGAAGCAGGAGAGGAGCAAATGCGCAGTCTTATATGGCAATTGTTGATGGCGTTGAAGTCCTGTCATGACCGTAATATTACCCATAGAGATATCAAACCTGAGAATATGGTGTTATGCTTTGAAGAGCAGAACACGGGGAGATGCCTGAAAGGAATTCCAAATGGCCACAATTTCACCACCAAAATGCGCATTATTGACTTTGGCAGTGCACTGGATGAGTTCACTTTAAAGCATTTGTATGGTTCTACTGGACCATCCAGAGTTGAACAGACTAATGAATATACTCCTCCGGAAGCCTTGCTTTATTCTAATTGGTACCGGAAGTCCACCAACACAACGTTGAAGTACGATATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGATTTTAGGATCACCAAATGTTTTCCAGATTAGTGATTACACACGCATTCTTTTAGACCAGCATCTACAGGGATGGAATGAGGGCTTAAAGGAGCTTGCCTACAAACTTAGATCATTCATGGAGTTGTGCATCTTAATCCCCGGGAGTTCCTTACGACATCACCAAACCGAGGGCCAGGCTCGAGGATCACCAGCTTCTTGGAAATGCTCAGAAGAATTTTTCTCTCATCAAATAAAGAGTAGAGATCCGCTTAAACTAGGGTTTCCAAATGTTTGGGCTATGAGGTTGGTGCGCCAGCTATTACTCTGGGACCCTGAGGAGCGGTTGAGCGTTGACGAAGCTTTGCAACATCCATATTTCCAGCCTCCTCCCAGGGAATGA

Protein Analysis

1069

Amino Acids

120.91

Weight (kDa)

5.76

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 201 - 259 5.8e-08 Protein phosphatase 2C
PP2C PF00481 306 - 435 1.1e-23 Protein phosphatase 2C
Pkinase PF00069 808 - 1062 5.9e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 279, 1056, 1669
Acc16I TGCGCA 2 cut(s) 2465, 2630
Acc36I ACCTGC 2 cut(s) 1629, 1833
Acc65I GGTACC 1 cut(s) 2757
AccB1I GGYRCC 1 cut(s) 2757
AccBSI CCGCTC 1 cut(s) 3148
AccI GTMKAC 3 cut(s) 92, 108, 2342
AccIII TCCGGA 1 cut(s) 2731
AclI AACGTT 1 cut(s) 2780
AclWI GGATC 6 cut(s) 261, 1825, 1882, 2842, 3019, 3065
AcoI YGGCCR 1 cut(s) 2605
AcsI RAATTY 8 cut(s) 603, 776, 1672, 1690, 1936, 2040, 2595, 3041
AcuI CTGAAG 2 cut(s) 444, 1770
AcvI CACGTG 1 cut(s) 965
AcyI GRCGYC 5 cut(s) 71, 276, 1053, 1074, 1666
AfaI GTAC 7 cut(s) 708, 1203, 1577, 1679, 1703, 2759, 2789
AfiI CCNNNNNNNGG 6 cut(s) 293, 294, 880, 1403, 1627, 2995
AflII CTTAAG 1 cut(s) 2008
AflIII ACRYGT 2 cut(s) 964, 1578
AjiI CACGTC 2 cut(s) 96, 854
AjnI CCWGG 5 cut(s) 292, 879, 2199, 3000, 3197
AjuI GAANNNNNNNTTGG 6 cut(s) 531, 563, 1356, 1388, 2016, 2048
Alw21I GWGCWC 3 cut(s) 770, 847, 2653
Alw26I GTCTC 5 cut(s) 249, 741, 1060, 1377, 2135
Alw44I GTGCAC 1 cut(s) 2649
AlwI GGATC 6 cut(s) 261, 1825, 1882, 2842, 3019, 3065
AlwNI CAGNNNCTG 1 cut(s) 2404
Ama87I CYCGRG 4 cut(s) 248, 1011, 2966, 3006
Aor13HI TCCGGA 1 cut(s) 2731
AoxI GGCC 5 cut(s) 232, 520, 1641, 2605, 2998
ApaLI GTGCAC 1 cut(s) 2649
ApeKI GCWGC 7 cut(s) 65, 210, 1139, 1293, 1310, 1997, 2404
ApoI RAATTY 8 cut(s) 603, 776, 1672, 1690, 1936, 2040, 2595, 3041
ArsI GACNNNNNNTTYG 4 cut(s) 1640, 1672, 2452, 2484
Asp700I GAANNNNTTC 4 cut(s) 777, 1785, 2043, 2195
Asp718I GGTACC 1 cut(s) 2757
AspLEI GCGC 4 cut(s) 125, 2466, 2631, 3120
AspS9I GGNCC 3 cut(s) 2693, 2998, 3136
AsuC2I CCSGG 2 cut(s) 2967, 2968
AsuHPI GGTGA 9 cut(s) 11, 1034, 1061, 1895, 2048, 2608, 2829, 2978, 3006
AvaI CYCGRG 4 cut(s) 248, 1011, 2966, 3006
AvaII GGWCC 2 cut(s) 2693, 3136
AxyI CCTNAGG 3 cut(s) 1626, 1638, 3141
BaeGI GKGCMC 1 cut(s) 2653
BalI TGGCCA 1 cut(s) 2607
BanI GGYRCC 1 cut(s) 2757
BanII GRGCYC 2 cut(s) 11, 692
BbrPI CACGTG 1 cut(s) 965
BbsI GAAGAC 1 cut(s) 2441
Bbv12I GWGCWC 3 cut(s) 770, 847, 2653
BbvI GCAGC 7 cut(s) 52, 197, 1126, 1305, 1322, 1984, 2391
BccI CCATC 8 cut(s) 338, 512, 713, 1142, 2419, 2482, 2704, 2892
BciT130I CCWGG 5 cut(s) 294, 881, 2201, 3002, 3199
BclI TGATCA 1 cut(s) 931
BcnI CCSGG 2 cut(s) 2967, 2968
BcoDI GTCTC 5 cut(s) 249, 741, 1060, 1377, 2135
BfaI CTAG 5 cut(s) 59, 366, 2058, 2256, 3083
BfmI CTRYAG 2 cut(s) 1409, 2891
BfoI RGCGCY 1 cut(s) 126
BfrI CTTAAG 1 cut(s) 2008
BfuAI ACCTGC 2 cut(s) 1629, 1833
BglII AGATCT 1 cut(s) 1230
BlpI GCTNAGC 2 cut(s) 1166, 1432
Bme1390I CCNGG 7 cut(s) 294, 881, 2201, 2967, 2968, 3002, 3199
Bme18I GGWCC 2 cut(s) 2693, 3136
BmeT110I CYCGRG 4 cut(s) 248, 1011, 2966, 3006
BmgBI CACGTC 2 cut(s) 96, 854
BmgT120I GGNCC 3 cut(s) 2693, 2998, 3136
BmiI GGNNCC 5 cut(s) 10, 691, 2759, 3137, 3138
BmrFI CCNGG 7 cut(s) 294, 881, 2201, 2967, 2968, 3002, 3199
BmrI ACTGGG 1 cut(s) 1347
BmuI ACTGGG 1 cut(s) 1347
BpiI GAAGAC 1 cut(s) 2441
BpmI CTGGAG 1 cut(s) 413
Bpu1102I GCTNAGC 2 cut(s) 1166, 1432
BpuEI CTTGAG 1 cut(s) 2265
BpuMI CCSGG 2 cut(s) 2967, 2968
Bsa29I ATCGAT 1 cut(s) 426
BsaAI YACGTR 2 cut(s) 414, 965
BsaBI GATNNNNATC 2 cut(s) 936, 1128
BsaHI GRCGYC 5 cut(s) 71, 276, 1053, 1074, 1666
BsaJI CCNNGG 8 cut(s) 292, 293, 1705, 2965, 2966, 2994, 3197, 3198
BsaWI WCCGGW 2 cut(s) 2731, 2760
BsaXI ACNNNNNCTCC 2 cut(s) 2791, 2821
Bsc4I CCNNNNNNNGG 6 cut(s) 293, 294, 880, 1403, 1627, 2995
Bse1I ACTGG 5 cut(s) 898, 1342, 1481, 2658, 2695
Bse21I CCTNAGG 3 cut(s) 1626, 1638, 3141
Bse8I GATNNNNATC 2 cut(s) 936, 1128
BseAI TCCGGA 1 cut(s) 2731
BseBI CCWGG 5 cut(s) 294, 881, 2201, 3002, 3199
BseCI ATCGAT 1 cut(s) 426
BseDI CCNNGG 8 cut(s) 292, 293, 1705, 2965, 2966, 2994, 3197, 3198
BseJI GATNNNNATC 2 cut(s) 936, 1128
BseLI CCNNNNNNNGG 6 cut(s) 293, 294, 880, 1403, 1627, 2995
BseMII CTCAG 9 cut(s) 1080, 1157, 1446, 1542, 1629, 1640, 2532, 3048, 3132
BseNI ACTGG 5 cut(s) 898, 1342, 1481, 2658, 2695
BseRI GAGGAG 4 cut(s) 2468, 2718, 3158, 3183
BseSI GKGCMC 1 cut(s) 2653
BseXI GCAGC 7 cut(s) 52, 197, 1126, 1305, 1322, 1984, 2391
BseYI CCCAGC 1 cut(s) 1396
BsgI GTGCAG 2 cut(s) 1068, 1193
Bsh1285I CGRYCG 1 cut(s) 532
BshFI GGCC 5 cut(s) 234, 522, 1643, 2607, 3000
BshNI GGYRCC 1 cut(s) 2757
BshVI ATCGAT 1 cut(s) 426
BsiEI CGRYCG 1 cut(s) 532
BsiHKAI GWGCWC 3 cut(s) 770, 847, 2653
BsiHKCI CYCGRG 4 cut(s) 248, 1011, 2966, 3006
BsiSI CCGG 5 cut(s) 128, 238, 2732, 2761, 2967
BslFI GGGAC 1 cut(s) 3149
BslI CCNNNNNNNGG 6 cut(s) 293, 294, 880, 1403, 1627, 2995
BsmAI GTCTC 5 cut(s) 249, 741, 1060, 1377, 2135
BsmBI CGTCTC 1 cut(s) 1060
BsmFI GGGAC 1 cut(s) 3149
BsmI GAATGC 3 cut(s) 282, 562, 2871
BsnI GGCC 5 cut(s) 234, 522, 1643, 2607, 3000
BsoBI CYCGRG 4 cut(s) 248, 1011, 2966, 3006
Bsp1286I GDGCHC 5 cut(s) 11, 692, 770, 847, 2653
Bsp13I TCCGGA 1 cut(s) 2731
Bsp1720I GCTNAGC 2 cut(s) 1166, 1432
BspANI GGCC 5 cut(s) 234, 522, 1643, 2607, 3000
BspCNI CTCAG 9 cut(s) 1081, 1158, 1445, 1543, 1630, 1639, 2533, 3047, 3133
BspDI ATCGAT 1 cut(s) 426
BspEI TCCGGA 1 cut(s) 2731
BspHI TCATGA 2 cut(s) 634, 2506
BspLI GGNNCC 5 cut(s) 10, 691, 2759, 3137, 3138
BspMAI CTGCAG 1 cut(s) 1413
BspMI ACCTGC 2 cut(s) 1629, 1833
BspPI GGATC 6 cut(s) 261, 1825, 1882, 2842, 3019, 3065
BspQI GCTCTTC 2 cut(s) 1638, 2559
BspT107I GGYRCC 1 cut(s) 2757
BspTI CTTAAG 1 cut(s) 2008
BsrBI CCGCTC 1 cut(s) 3148
BsrI ACTGG 5 cut(s) 898, 1342, 1481, 2658, 2695
BssECI CCNNGG 8 cut(s) 292, 293, 1705, 2965, 2966, 2994, 3197, 3198
BssNAI GTATAC 1 cut(s) 2343
BssNI GRCGYC 5 cut(s) 71, 276, 1053, 1074, 1666
BssT1I CCWWGG 1 cut(s) 1705
Bst1107I GTATAC 1 cut(s) 2343
Bst2UI CCWGG 5 cut(s) 294, 881, 2201, 3002, 3199
Bst4CI ACNGT 9 cut(s) 106, 322, 1117, 1656, 1717, 1913, 2177, 2347, 2513
Bst6I CTCTTC 4 cut(s) 1240, 1638, 1853, 2559
BstACI GRCGYC 5 cut(s) 71, 276, 1053, 1074, 1666
BstAFI CTTAAG 1 cut(s) 2008
BstAPI GCANNNNNTGC 1 cut(s) 264
BstBAI YACGTR 2 cut(s) 414, 965
BstC8I GCNNGC 5 cut(s) 1029, 1172, 1896, 2922, 3122
BstENI CCTNNNNNAGG 1 cut(s) 1625
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 4 cut(s) 125, 2466, 2631, 3120
BstMAI GTCTC 5 cut(s) 249, 741, 1060, 1377, 2135
BstMCI CGRYCG 1 cut(s) 532
BstMWI GCNNNNNNNGC 5 cut(s) 264, 803, 1171, 1533, 1808
BstNI CCWGG 5 cut(s) 294, 881, 2201, 3002, 3199
BstNSI RCATGY 3 cut(s) 1571, 1582, 1702
BstSCI CCNGG 7 cut(s) 292, 879, 2199, 2965, 2966, 3000, 3197
BstSFI CTRYAG 2 cut(s) 1409, 2891
BstSLI GKGCMC 1 cut(s) 2653
BstSNI TACGTA 1 cut(s) 414
BstV1I GCAGC 7 cut(s) 52, 197, 1126, 1305, 1322, 1984, 2391
BstV2I GAAGAC 1 cut(s) 2441
BstX2I RGATCY 3 cut(s) 1230, 1817, 3070
BstXI CCANNNNNNTGG 5 cut(s) 898, 1658, 2418, 3024, 3099
BstYI RGATCY 3 cut(s) 1230, 1817, 3070
BstZ17I GTATAC 1 cut(s) 2343
Bsu15I ATCGAT 1 cut(s) 426
Bsu36I CCTNAGG 3 cut(s) 1626, 1638, 3141
BsuRI GGCC 5 cut(s) 234, 522, 1643, 2607, 3000
BsuTUI ATCGAT 1 cut(s) 426
BtrI CACGTC 2 cut(s) 96, 854
BtsI GCAGTG 1 cut(s) 2653
BtsIMutI CAGTG 4 cut(s) 327, 891, 2651, 2653
BveI ACCTGC 2 cut(s) 1629, 1833
Cac8I GCNNGC 5 cut(s) 1029, 1172, 1896, 2922, 3122
CaiI CAGNNNCTG 1 cut(s) 2404
CciI TCATGA 2 cut(s) 634, 2506
CfoI GCGC 4 cut(s) 125, 2466, 2631, 3120
Cfr13I GGNCC 3 cut(s) 2693, 2998, 3136
Cfr9I CCCGGG 1 cut(s) 2966
ClaI ATCGAT 1 cut(s) 426
CseI GACGC 4 cut(s) 79, 172, 1063, 2396
Csp6I GTAC 7 cut(s) 707, 1202, 1576, 1678, 1702, 2758, 2788
CspCI CAANNNNNGTGG 2 cut(s) 100, 135
CviQI GTAC 7 cut(s) 707, 1202, 1576, 1678, 1702, 2758, 2788
DraI TTTAAA 3 cut(s) 1063, 1971, 2670
EaeI YGGCCR 1 cut(s) 2605
Eam1104I CTCTTC 4 cut(s) 1240, 1638, 1853, 2559
EarI CTCTTC 4 cut(s) 1240, 1638, 1853, 2559
Eco105I TACGTA 1 cut(s) 414
Eco130I CCWWGG 1 cut(s) 1705
Eco147I AGGCCT 1 cut(s) 1643
Eco24I GRGCYC 2 cut(s) 11, 692
Eco32I GATATC 1 cut(s) 2533
Eco47I GGWCC 2 cut(s) 2693, 3136
Eco57I CTGAAG 2 cut(s) 444, 1770
Eco72I CACGTG 1 cut(s) 965
Eco81I CCTNAGG 3 cut(s) 1626, 1638, 3141
Eco88I CYCGRG 4 cut(s) 248, 1011, 2966, 3006
EcoNI CCTNNNNNAGG 1 cut(s) 1625
EcoO109I RGGNCCY 1 cut(s) 3136
EcoRI GAATTC 1 cut(s) 2595
EcoRII CCWGG 5 cut(s) 292, 879, 2199, 3000, 3197
EcoRV GATATC 1 cut(s) 2533
EcoT14I CCWWGG 1 cut(s) 1705
EcoT22I ATGCAT 1 cut(s) 433
EcoT38I GRGCYC 2 cut(s) 11, 692
ErhI CCWWGG 1 cut(s) 1705
Esp3I CGTCTC 1 cut(s) 1060
FalI AAGNNNNNCTT 4 cut(s) 564, 596, 2727, 2759
FaqI GGGAC 1 cut(s) 3149
FauI CCCGC 2 cut(s) 215, 970
FauNDI CATATG 3 cut(s) 1450, 1879, 2161
FbaI TGATCA 1 cut(s) 931
FblI GTMKAC 3 cut(s) 92, 108, 2342
FriOI GRGCYC 2 cut(s) 11, 692
FspAI RTGCGCAY 1 cut(s) 2630
FspBI CTAG 5 cut(s) 59, 366, 2058, 2256, 3083
FspI TGCGCA 2 cut(s) 2465, 2630
GlaI GCGC 4 cut(s) 124, 2465, 2630, 3119
GsaI CCCAGC 1 cut(s) 1400
GsuI CTGGAG 1 cut(s) 413
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 5 cut(s) 234, 522, 1643, 2607, 3000
HapII CCGG 5 cut(s) 128, 238, 2732, 2761, 2967
HgaI GACGC 4 cut(s) 79, 172, 1063, 2396
HhaI GCGC 4 cut(s) 125, 2466, 2631, 3120
Hin1I GRCGYC 5 cut(s) 71, 276, 1053, 1074, 1666
Hin6I GCGC 4 cut(s) 123, 2464, 2629, 3118
HinP1I GCGC 4 cut(s) 123, 2464, 2629, 3118
HincII GTYRAC 4 cut(s) 93, 1095, 1720, 3160
HindII GTYRAC 4 cut(s) 93, 1095, 1720, 3160
HindIII AAGCTT 3 cut(s) 383, 456, 3165
HpaII CCGG 5 cut(s) 128, 238, 2732, 2761, 2967
HphI GGTGA 9 cut(s) 11, 1034, 1061, 1895, 2048, 2608, 2829, 2978, 3006
Hpy188I TCNGA 8 cut(s) 32, 172, 772, 1147, 1228, 1552, 1822, 3037
Hpy99I CGWCG 5 cut(s) 73, 94, 97, 278, 858
HpyAV CCTTC 8 cut(s) 298, 546, 1373, 1421, 1585, 1745, 1955, 2231
HpyCH4III ACNGT 9 cut(s) 106, 322, 1117, 1656, 1717, 1913, 2177, 2347, 2513
HpyF10VI GCNNNNNNNGC 5 cut(s) 264, 803, 1171, 1533, 1808
Hsp92I GRCGYC 5 cut(s) 71, 276, 1053, 1074, 1666
HspAI GCGC 4 cut(s) 123, 2464, 2629, 3118
KflI GGGWCCC 1 cut(s) 3136
Kpn2I TCCGGA 1 cut(s) 2731
KpnI GGTACC 1 cut(s) 2761
Ksp22I TGATCA 1 cut(s) 931
LguI GCTCTTC 2 cut(s) 1638, 2559
LmnI GCTCC 6 cut(s) 14, 130, 695, 2455, 2917, 3145
Lsp1109I GCAGC 7 cut(s) 52, 197, 1126, 1305, 1322, 1984, 2391
MaeI CTAG 5 cut(s) 59, 366, 2058, 2256, 3083
MaeIII GTNAC 2 cut(s) 316, 1049
MbiI CCGCTC 1 cut(s) 3148
MfeI CAATTG 3 cut(s) 702, 1463, 2480
MflI RGATCY 3 cut(s) 1230, 1817, 3070
MhlI GDGCHC 5 cut(s) 11, 692, 770, 847, 2653
MlsI TGGCCA 1 cut(s) 2607
MluNI TGGCCA 1 cut(s) 2607
MlyI GAGTC 3 cut(s) 743, 1424, 2276
MmeI TCCRAC 2 cut(s) 1354, 2159
Mox20I TGGCCA 1 cut(s) 2607
Mph1103I ATGCAT 1 cut(s) 433
MroI TCCGGA 1 cut(s) 2731
MroXI GAANNNNTTC 4 cut(s) 777, 1785, 2043, 2195
MscI TGGCCA 1 cut(s) 2607
MslI CAYNNNNRTG 5 cut(s) 896, 1527, 2416, 2624, 2679
Msp20I TGGCCA 1 cut(s) 2607
MspA1I CMGCKG 4 cut(s) 65, 210, 1313, 2084
MspCI CTTAAG 1 cut(s) 2008
MspI CCGG 5 cut(s) 128, 238, 2732, 2761, 2967
MspR9I CCNGG 7 cut(s) 294, 881, 2201, 2967, 2968, 3002, 3199
MunI CAATTG 3 cut(s) 702, 1463, 2480
Mva1269I GAATGC 3 cut(s) 282, 562, 2871
MvaI CCWGG 5 cut(s) 294, 881, 2201, 3002, 3199
MwoI GCNNNNNNNGC 5 cut(s) 264, 803, 1171, 1533, 1808
NciI CCSGG 2 cut(s) 2967, 2968
NdeI CATATG 3 cut(s) 1450, 1879, 2161
NlaIV GGNNCC 5 cut(s) 10, 691, 2759, 3137, 3138
NmuCI GTSAC 1 cut(s) 1049
NsbI TGCGCA 2 cut(s) 2465, 2630
NsiI ATGCAT 1 cut(s) 433
NspI RCATGY 3 cut(s) 1571, 1582, 1702
PaeR7I CTCGAG 3 cut(s) 248, 1011, 3006
PagI TCATGA 2 cut(s) 634, 2506
PasI CCCWGGG 2 cut(s) 293, 3198
PceI AGGCCT 1 cut(s) 1643
PciI ACATGT 1 cut(s) 1578
PciSI GCTCTTC 2 cut(s) 1638, 2559
PctI GAATGC 3 cut(s) 282, 562, 2871
PdmI GAANNNNTTC 4 cut(s) 777, 1785, 2043, 2195
PfeI GAWTC 9 cut(s) 86, 544, 587, 676, 1214, 1781, 2111, 2150, 2276
PfoI TCCNGGA 1 cut(s) 2199
Ple19I CGATCG 1 cut(s) 532
PleI GAGTC 3 cut(s) 743, 1423, 2275
PmaCI CACGTG 1 cut(s) 965
PmlI CACGTG 1 cut(s) 965
PpsI GAGTC 3 cut(s) 743, 1423, 2275
Ppu21I YACGTR 2 cut(s) 414, 965
PpuMI RGGWCCY 1 cut(s) 3136
PscI ACATGT 1 cut(s) 1578
Psp1406I AACGTT 1 cut(s) 2780
Psp5II RGGWCCY 1 cut(s) 3136
Psp6I CCWGG 5 cut(s) 292, 879, 2199, 3000, 3197
PspCI CACGTG 1 cut(s) 965
PspFI CCCAGC 1 cut(s) 1396
PspGI CCWGG 5 cut(s) 292, 879, 2199, 3000, 3197
PspN4I GGNNCC 5 cut(s) 10, 691, 2759, 3137, 3138
PspPI GGNCC 3 cut(s) 2693, 2998, 3136
PspPPI RGGWCCY 1 cut(s) 3136
PspXI VCTCGAGB 2 cut(s) 1011, 3006
PstI CTGCAG 1 cut(s) 1413
PstNI CAGNNNCTG 1 cut(s) 2404
PsuI RGATCY 3 cut(s) 1230, 1817, 3070
PvuI CGATCG 1 cut(s) 532
PvuII CAGCTG 2 cut(s) 1313, 2084
RsaI GTAC 7 cut(s) 708, 1203, 1577, 1679, 1703, 2759, 2789
RsaNI GTAC 7 cut(s) 707, 1202, 1576, 1678, 1702, 2758, 2788
RseI CAYNNNNRTG 5 cut(s) 896, 1527, 2416, 2624, 2679
SalI GTCGAC 1 cut(s) 91
SapI GCTCTTC 2 cut(s) 1638, 2559
Sau96I GGNCC 3 cut(s) 2693, 2998, 3136
SchI GAGTC 3 cut(s) 743, 1424, 2276
ScrFI CCNGG 7 cut(s) 294, 881, 2201, 2967, 2968, 3002, 3199
SduI GDGCHC 5 cut(s) 11, 692, 770, 847, 2653
SfcI CTRYAG 2 cut(s) 1409, 2891
Sfr274I CTCGAG 3 cut(s) 248, 1011, 3006
SgrDI CGTCGACG 1 cut(s) 91
SinI GGWCC 2 cut(s) 2693, 3136
SlaI CTCGAG 3 cut(s) 248, 1011, 3006
SmaI CCCGGG 1 cut(s) 2968
SmiMI CAYNNNNRTG 5 cut(s) 896, 1527, 2416, 2624, 2679
SmlI CTYRAG 5 cut(s) 248, 1011, 2008, 2280, 3006
SmoI CTYRAG 5 cut(s) 248, 1011, 2008, 2280, 3006
SnaBI TACGTA 1 cut(s) 414
SseBI AGGCCT 1 cut(s) 1643
SspI AATATT 6 cut(s) 48, 742, 1607, 1826, 2030, 2518
SspMI CTAG 5 cut(s) 59, 366, 2058, 2256, 3083
StuI AGGCCT 1 cut(s) 1643
StyD4I CCNGG 7 cut(s) 292, 879, 2199, 2965, 2966, 3000, 3197
StyI CCWWGG 1 cut(s) 1705
TaaI ACNGT 9 cut(s) 106, 322, 1117, 1656, 1717, 1913, 2177, 2347, 2513
TatI WGTACW 3 cut(s) 706, 1201, 1575
TauI GCSGC 3 cut(s) 65, 237, 806
TfiI GAWTC 9 cut(s) 86, 544, 587, 676, 1214, 1781, 2111, 2150, 2276
TscAI CASTG 4 cut(s) 327, 898, 2653, 2658
TseFI GTSAC 1 cut(s) 1049
TseI GCWGC 7 cut(s) 65, 210, 1139, 1293, 1310, 1997, 2404
Tsp45I GTSAC 1 cut(s) 1049
TspMI CCCGGG 1 cut(s) 2966
TspRI CASTG 4 cut(s) 327, 898, 2653, 2658
Vha464I CTTAAG 1 cut(s) 2008
VneI GTGCAC 1 cut(s) 2649
VpaK11BI GGWCC 2 cut(s) 2693, 3136
XagI CCTNNNNNAGG 1 cut(s) 1625
XapI RAATTY 8 cut(s) 603, 776, 1672, 1690, 1936, 2040, 2595, 3041
XceI RCATGY 3 cut(s) 1571, 1582, 1702
XcmI CCANNNNNNNNNTGG 3 cut(s) 676, 1658, 2418
XhoI CTCGAG 3 cut(s) 248, 1011, 3006
XmaI CCCGGG 1 cut(s) 2966
XmiI GTMKAC 3 cut(s) 92, 108, 2342
XmnI GAANNNNTTC 4 cut(s) 777, 1785, 2043, 2195
XspI CTAG 5 cut(s) 59, 366, 2058, 2256, 3083
ZraI GACGTC 3 cut(s) 277, 1054, 1667
Zsp2I ATGCAT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.