Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0003017

Physical Location & Seq

Genomic Coordinates Reverse (-)

1281851 .. 1285686

Gene Structure 3836 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1021300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGAGAATCCTCCAATCCATTACTGGTCAGTGTCGGCCGGCGCTGCGAGCTCTGGGACGGCGGTACTTTGCGGCTGCGGCGGCGACGACGGAGGAATACGCGAAGAGGAACTACGCCAACAACGTGTCGGAGTACAACAGCGTGTTCAATTCCCTCACTGCTCAGAGGAAGCATTTCCTGCTGAGGGATGCGTATGAGGATATGATGCTCGACGGCGTCCAGCCTGACCAGGACAGCTTCCGGTCGCTCATACTGGGCACCCTCAAAGGCTCGAGCTTGCAGGACGCTTTCTTCTTCGCTGACCAGATGAAATCCATGGGCTTGGCCCCTGATGTTAATATGTACAACATATTGATCACATTGTGTGGGAAGTGTAAGCACTCTGATCGAGCGATTCAGATTTTGGAAGACATGAAGAACTATGAAGTGTCACCCAAGGTACAGACCTACATGTGTCTGCTCAATGCGTGCGCAGCTACTGGCCGATTAGATCGAGTGTATGCAATTGTCCGTGACATGACTGCTGCTGGTCTTGGGCTAAACAGGTTCTGCTACGCTGGACTTGTAACTGCACTTAGGAACAAAACCCCTTTACCAGATGATTTTGGCACCAAAATTATAGAGTTTGTTGAGCAATCAAAAGAGTGGTCATCGGTTGAAGGATCAAGTATGACTGCTGAAAATGTGATGATGGGTGTGACAGAAGAAGAGTTGTATAATATGCCAACTGCTGAATATTCTCATAGGGGTGGGTTTCTGAATAGGCAACTAACTGTGTATCATGCTGCATTCCATGCTTGCGCAGACCTCAGGAATGTAGAGGTGATGGAAGCTCTTCAGGAGATGCTAGCGAAGGAAGGAAAAAGTCCCGATCTGTTTATTGTGTTGCAAATAATGAGGTGTTATCTACACTCAGGGGACATTGACCGTGGTATTCAAACTTTTGAAGACTATATGAAGTCAGGAAAGCCTCCTGTTGTAGAACTATATACGATGCTTGTGGAGGGAGCCATGATTGGATATACTCCCAAGGGAATGAAAATTGCCGAAGAAACACTGGTGAATATGAATTCCCGGAGCTTTTTCTTAAGTCCAAAAATGGGGAGTGATCTTCTCCTTCAAGCTGCTGGTGACGAGACTGGAGGTTATAGTGTTGCCAACTATATCTGGGACCTGATGGAAGCGCGTAAAATAGTTCCTCAATTCCTTTCCGTAGAAGCATATTACAAGGGATTAAAAAAACGTGAGATTCCTGAAGATGATCCACGACTGCAACATGTTACAAGGACATACAATGACCTTCGCGCCAGAAGGGGGCCTGGACGAGCTATTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

446

Amino Acids

50.18

Weight (kDa)

6.43

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	64 - 182	1.7e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	101 - 157	3.5e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	110 - 158	2.3e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35850
fragaria_vesca	FvH4_6g51990
malus_domestica	MD09G1021100.v1.1 MD09G1021300.v1.1 MD17G1021300.v1.1
prunus_persica	Prupe.3G295200_v2.0.a1 Prupe.3G295200_v2.0.a1
pyrus_communis	pycom111g01770 pycom17g01800
rosa_chinensis	RchiOBHm_Chr2g0173461 RchiOBHm_Chr6g0291191
rosa_laevigata	RLG00000022192
rosa_multiflora	Rmu_sc0000580.1_g000120 Rmu_sc0015463.1_g000007 Rmu_sc0028728.1_g000001 Rmu_ssc0000467.1_g000039
rosa_roxburghii	Rroxscaffold_2G00078830 Rroxscaffold_2G00079350 Rroxscaffold_2G00084510
rosa_rugosa	Rorug02G0525500 Rorug02G0568900 Rorug02G0569200 Rorug02G0569500 Rorug02G0570700
rosa_samantha	Rh2AG521200 Rh2AG649100 Rh2BG659700 Rh2CG574600 Rh2CG624900 Rh2DG674800 Rh3DG228100 Rh4CG014600 Rh4CG314700 Rh4DG296000 Rh6AG277500 Rh6AG329100 Rh7BG450100
rosa_wichuraiana	Rw2G053290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	472, 802
AccB1I	GGYRCC	2 cut(s)	257, 608
AccII	CGCG	3 cut(s)	101, 1186, 1305
AciI	CCGC	4 cut(s)	61, 71, 77, 80
AclWI	GGATC	2 cut(s)	670, 1256
AcoI	YGGCCR	2 cut(s)	35, 481
AcsI	RAATTY	1 cut(s)	1069
AcuI	CTGAAG	2 cut(s)	821, 1275
AcyI	GRCGYC	1 cut(s)	216
AdeI	CACNNNGTG	1 cut(s)	363
AfaI	GTAC	4 cut(s)	65, 134, 344, 441
AfiI	CCNNNNNNNGG	3 cut(s)	184, 1100, 1314
AflII	CTTAAG	1 cut(s)	1087
AflIII	ACRYGT	3 cut(s)	123, 450, 1276
AgsI	TTSAA	5 cut(s)	148, 659, 938, 947, 1121
AjnI	CCWGG	2 cut(s)	228, 1318
AluBI	AGCT	8 cut(s)	50, 237, 276, 476, 833, 1080, 1124, 1328
AluI	AGCT	8 cut(s)	50, 237, 276, 476, 833, 1080, 1124, 1328
Alw21I	GWGCWC	1 cut(s)	52
Alw26I	GTCTC	1 cut(s)	1130
AlwI	GGATC	2 cut(s)	670, 1256
AlwNI	CAGNNNCTG	2 cut(s)	479, 549
Ama87I	CYCGRG	1 cut(s)	271
AoxI	GGCC	4 cut(s)	35, 324, 481, 1316
ApeKI	GCWGC	6 cut(s)	43, 74, 473, 524, 785, 1124
ApoI	RAATTY	1 cut(s)	1069
ArsI	GACNNNNNNTTYG	2 cut(s)	632, 664
Asp700I	GAANNNNTTC	2 cut(s)	173, 834
AspLEI	GCGC	5 cut(s)	43, 473, 803, 1186, 1307
AspS9I	GGNCC	3 cut(s)	325, 1171, 1316
AsuC2I	CCSGG	1 cut(s)	1075
AsuHPI	GGTGA	4 cut(s)	423, 835, 1072, 1142
AsuNHI	GCTAGC	1 cut(s)	847
AvaI	CYCGRG	1 cut(s)	271
AvaII	GGWCC	1 cut(s)	1171
AxyI	CCTNAGG	1 cut(s)	809
BaeGI	GKGCMC	1 cut(s)	260
BanI	GGYRCC	2 cut(s)	257, 608
BanII	GRGCYC	1 cut(s)	52
BarI	GAAGNNNNNNTAC	2 cut(s)	95, 127
BbsI	GAAGAC	2 cut(s)	414, 954
Bbv12I	GWGCWC	1 cut(s)	52
BbvCI	CCTCAGC	1 cut(s)	182
BbvI	GCAGC	6 cut(s)	30, 61, 485, 511, 772, 1111
BccI	CCATC	3 cut(s)	685, 820, 1171
BceAI	ACGGC	2 cut(s)	74, 229
BcgI	CGANNNNNNTGC	2 cut(s)	368, 402
BciT130I	CCWGG	2 cut(s)	230, 1320
BclI	TGATCA	1 cut(s)	354
BcnI	CCSGG	1 cut(s)	1075
BcoDI	GTCTC	1 cut(s)	1130
BfaI	CTAG	1 cut(s)	848
BfoI	RGCGCY	1 cut(s)	44
BfrI	CTTAAG	1 cut(s)	1087
BisI	GCNGC	9 cut(s)	44, 72, 75, 78, 81, 474, 525, 786, 1125
BlsI	GCNGC	9 cut(s)	45, 73, 76, 79, 82, 475, 526, 787, 1126
Bme1390I	CCNGG	3 cut(s)	230, 1075, 1320
Bme18I	GGWCC	1 cut(s)	1171
BmeT110I	CYCGRG	1 cut(s)	271
BmgT120I	GGNCC	3 cut(s)	325, 1171, 1316
BmiI	GGNNCC	6 cut(s)	259, 327, 610, 1009, 1172, 1317
BmrFI	CCNGG	3 cut(s)	230, 1075, 1320
BmrI	ACTGGG	1 cut(s)	263
BmsI	GCATC	4 cut(s)	178, 195, 834, 984
BmtI	GCTAGC	1 cut(s)	851
BmuI	ACTGGG	1 cut(s)	263
BpiI	GAAGAC	2 cut(s)	414, 954
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	1 cut(s)	182
BpuMI	CCSGG	1 cut(s)	1075
BsaHI	GRCGYC	1 cut(s)	216
BsaJI	CCNNGG	4 cut(s)	315, 435, 928, 1029
BsaWI	WCCGGW	1 cut(s)	240
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 1100, 1314
Bse118I	RCCGGY	1 cut(s)	37
Bse1I	ACTGG	5 cut(s)	28, 258, 484, 1062, 1144
Bse21I	CCTNAGG	1 cut(s)	809
BseBI	CCWGG	2 cut(s)	230, 1320
BseDI	CCNNGG	4 cut(s)	315, 435, 928, 1029
BseGI	GGATG	1 cut(s)	193
BseLI	CCNNNNNNNGG	3 cut(s)	184, 1100, 1314
BseMII	CTCAG	4 cut(s)	173, 176, 823, 927
BseNI	ACTGG	5 cut(s)	28, 258, 484, 1062, 1144
BseSI	GKGCMC	1 cut(s)	260
BseX3I	CGGCCG	1 cut(s)	35
BseXI	GCAGC	6 cut(s)	30, 61, 485, 511, 772, 1111
BsgI	GTGCAG	1 cut(s)	555
Bsh1236I	CGCG	3 cut(s)	101, 1186, 1305
Bsh1285I	CGRYCG	2 cut(s)	38, 245
BshFI	GGCC	4 cut(s)	37, 326, 483, 1318
BshNI	GGYRCC	2 cut(s)	257, 608
BsiEI	CGRYCG	2 cut(s)	38, 245
BsiHKAI	GWGCWC	1 cut(s)	52
BsiHKCI	CYCGRG	1 cut(s)	271
BsiSI	CCGG	3 cut(s)	38, 241, 1075
BslFI	GGGAC	4 cut(s)	69, 852, 932, 1184
BslI	CCNNNNNNNGG	3 cut(s)	184, 1100, 1314
BsmAI	GTCTC	1 cut(s)	1130
BsmFI	GGGAC	4 cut(s)	69, 852, 932, 1184
BsmI	GAATGC	1 cut(s)	788
BsnI	GGCC	4 cut(s)	37, 326, 483, 1318
BsoBI	CYCGRG	1 cut(s)	271
Bsp1286I	GDGCHC	2 cut(s)	52, 260
Bsp1407I	TGTACA	1 cut(s)	342
Bsp143I	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
Bsp19I	CCATGG	1 cut(s)	315
BspACI	CCGC	4 cut(s)	61, 71, 77, 80
BspANI	GGCC	4 cut(s)	37, 326, 483, 1318
BspCNI	CTCAG	4 cut(s)	174, 175, 822, 926
BspFNI	CGCG	3 cut(s)	101, 1186, 1305
BspLI	GGNNCC	6 cut(s)	259, 327, 610, 1009, 1172, 1317
BspOI	GCTAGC	1 cut(s)	851
BspPI	GGATC	2 cut(s)	670, 1256
BspQI	GCTCTTC	1 cut(s)	840
BspT107I	GGYRCC	2 cut(s)	257, 608
BspTI	CTTAAG	1 cut(s)	1087
BsrFI	RCCGGY	1 cut(s)	37
BsrGI	TGTACA	1 cut(s)	342
BsrI	ACTGG	5 cut(s)	28, 258, 484, 1062, 1144
BssAI	RCCGGY	1 cut(s)	37
BssECI	CCNNGG	4 cut(s)	315, 435, 928, 1029
BssMI	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
BssNI	GRCGYC	1 cut(s)	216
BssT1I	CCWWGG	3 cut(s)	315, 435, 1029
Bst2UI	CCWGG	2 cut(s)	230, 1320
Bst4CI	ACNGT	2 cut(s)	775, 929
Bst6I	CTCTTC	3 cut(s)	98, 702, 840
BstACI	GRCGYC	1 cut(s)	216
BstAFI	CTTAAG	1 cut(s)	1087
BstAPI	GCANNNNNTGC	2 cut(s)	178, 794
BstAUI	TGTACA	1 cut(s)	342
BstC8I	GCNNGC	6 cut(s)	39, 48, 278, 469, 799, 849
BstDEI	CTNAG	5 cut(s)	162, 182, 575, 809, 913
BstDSI	CCRYGG	2 cut(s)	315, 928
BstF5I	GGATG	1 cut(s)	193
BstFNI	CGCG	3 cut(s)	101, 1186, 1305
BstH2I	RGCGCY	1 cut(s)	44
BstHHI	GCGC	5 cut(s)	43, 473, 803, 1186, 1307
BstKTI	GATC	7 cut(s)	357, 388, 493, 665, 874, 1111, 1264
BstMAI	GTCTC	1 cut(s)	1130
BstMBI	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
BstMCI	CGRYCG	2 cut(s)	38, 245
BstMWI	GCNNNNNNNGC	7 cut(s)	43, 47, 77, 80, 178, 473, 794
BstNI	CCWGG	2 cut(s)	230, 1320
BstNSI	RCATGY	2 cut(s)	454, 1280
BstSCI	CCNGG	3 cut(s)	228, 1073, 1318
BstSLI	GKGCMC	1 cut(s)	260
BstUI	CGCG	3 cut(s)	101, 1186, 1305
BstV1I	GCAGC	6 cut(s)	30, 61, 485, 511, 772, 1111
BstV2I	GAAGAC	2 cut(s)	414, 954
BstXI	CCANNNNNNTGG	1 cut(s)	322
BstZI	CGGCCG	1 cut(s)	35
Bsu36I	CCTNAGG	1 cut(s)	809
BsuRI	GGCC	4 cut(s)	37, 326, 483, 1318
BtgI	CCRYGG	2 cut(s)	315, 928
BtsCI	GGATG	1 cut(s)	193
BtsI	GCAGTG	1 cut(s)	156
BtsIMutI	CAGTG	3 cut(s)	35, 156, 1055
Cac8I	GCNNGC	6 cut(s)	39, 48, 278, 469, 799, 849
CaiI	CAGNNNCTG	2 cut(s)	479, 549
CfoI	GCGC	5 cut(s)	43, 473, 803, 1186, 1307
Cfr10I	RCCGGY	1 cut(s)	37
Cfr13I	GGNCC	3 cut(s)	325, 1171, 1316
CseI	GACGC	2 cut(s)	205, 293
Csp6I	GTAC	4 cut(s)	64, 133, 343, 440
CviAII	CATG	8 cut(s)	316, 412, 451, 517, 782, 794, 1012, 1277
CviQI	GTAC	4 cut(s)	64, 133, 343, 440
DdeI	CTNAG	5 cut(s)	162, 182, 575, 809, 913
DpnI	GATC	7 cut(s)	356, 387, 492, 664, 873, 1110, 1263
DpnII	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
DraIII	CACNNNGTG	1 cut(s)	363
EaeI	YGGCCR	2 cut(s)	35, 481
EagI	CGGCCG	1 cut(s)	35
Eam1104I	CTCTTC	3 cut(s)	98, 702, 840
EarI	CTCTTC	3 cut(s)	98, 702, 840
Ecl136II	GAGCTC	1 cut(s)	50
EclXI	CGGCCG	1 cut(s)	35
Eco130I	CCWWGG	3 cut(s)	315, 435, 1029
Eco24I	GRGCYC	1 cut(s)	52
Eco47I	GGWCC	1 cut(s)	1171
Eco52I	CGGCCG	1 cut(s)	35
Eco53kI	GAGCTC	1 cut(s)	50
Eco57I	CTGAAG	2 cut(s)	821, 1275
Eco81I	CCTNAGG	1 cut(s)	809
Eco88I	CYCGRG	1 cut(s)	271
EcoICRI	GAGCTC	1 cut(s)	50
EcoO109I	RGGNCCY	2 cut(s)	1171, 1316
EcoRI	GAATTC	1 cut(s)	1069
EcoRII	CCWGG	2 cut(s)	228, 1318
EcoT14I	CCWWGG	3 cut(s)	315, 435, 1029
EcoT38I	GRGCYC	1 cut(s)	52
ErhI	CCWWGG	3 cut(s)	315, 435, 1029
FaeI	CATG	8 cut(s)	319, 415, 454, 520, 785, 797, 1015, 1280
FaqI	GGGAC	4 cut(s)	69, 852, 932, 1184
FatI	CATG	8 cut(s)	315, 411, 450, 516, 781, 793, 1011, 1276
FbaI	TGATCA	1 cut(s)	354
Fnu4HI	GCNGC	9 cut(s)	44, 72, 75, 78, 81, 474, 525, 786, 1125
FokI	GGATG	1 cut(s)	200
FriOI	GRGCYC	1 cut(s)	52
Fsp4HI	GCNGC	9 cut(s)	44, 72, 75, 78, 81, 474, 525, 786, 1125
FspBI	CTAG	1 cut(s)	848
FspI	TGCGCA	2 cut(s)	472, 802
GlaI	GCGC	5 cut(s)	42, 472, 802, 1185, 1306
GluI	GCNGC	9 cut(s)	44, 72, 75, 78, 81, 474, 525, 786, 1125
GsuI	CTGGAG	1 cut(s)	1161
HaeII	RGCGCY	1 cut(s)	44
HaeIII	GGCC	4 cut(s)	37, 326, 483, 1318
HapII	CCGG	3 cut(s)	38, 241, 1075
HgaI	GACGC	2 cut(s)	205, 293
HhaI	GCGC	5 cut(s)	43, 473, 803, 1186, 1307
Hin1I	GRCGYC	1 cut(s)	216
Hin1II	CATG	8 cut(s)	319, 415, 454, 520, 785, 797, 1015, 1280
Hin6I	GCGC	5 cut(s)	41, 471, 801, 1184, 1305
HinP1I	GCGC	5 cut(s)	41, 471, 801, 1184, 1305
HinfI	GANTC	3 cut(s)	6, 394, 1249
HpaII	CCGG	3 cut(s)	38, 241, 1075
HphI	GGTGA	4 cut(s)	423, 835, 1072, 1142
Hpy188I	TCNGA	5 cut(s)	130, 165, 385, 399, 759
Hpy188III	TCNNGA	5 cut(s)	811, 839, 869, 963, 1253
Hpy99I	CGWCG	3 cut(s)	88, 91, 215
HpyAV	CCTTC	6 cut(s)	653, 847, 851, 1127, 1305, 1310
HpyCH4III	ACNGT	2 cut(s)	775, 929
HpyCH4IV	ACGT	2 cut(s)	123, 1243
HpyCH4V	TGCA	6 cut(s)	280, 503, 572, 788, 889, 1273
HpyF10VI	GCNNNNNNNGC	7 cut(s)	43, 47, 77, 80, 178, 473, 794
HpyF3I	CTNAG	5 cut(s)	162, 182, 575, 809, 913
HpySE526I	ACGT	2 cut(s)	123, 1243
Hsp92I	GRCGYC	1 cut(s)	216
Hsp92II	CATG	8 cut(s)	319, 415, 454, 520, 785, 797, 1015, 1280
HspAI	GCGC	5 cut(s)	41, 471, 801, 1184, 1305
KroI	GCCGGC	1 cut(s)	37
KroNI	GCCGGC	1 cut(s)	39
Ksp22I	TGATCA	1 cut(s)	354
Kzo9I	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
LguI	GCTCTTC	1 cut(s)	840
LmnI	GCTCC	2 cut(s)	1007, 1077
Lsp1109I	GCAGC	6 cut(s)	30, 61, 485, 511, 772, 1111
LweI	GCATC	4 cut(s)	178, 195, 834, 984
MaeI	CTAG	1 cut(s)	848
MaeII	ACGT	2 cut(s)	123, 1243
MaeIII	GTNAC	6 cut(s)	429, 512, 565, 697, 1130, 1279
MalI	GATC	7 cut(s)	356, 387, 492, 664, 873, 1110, 1263
MboI	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
MfeI	CAATTG	1 cut(s)	504
MhlI	GDGCHC	2 cut(s)	52, 260
MluCI	AATT	6 cut(s)	148, 504, 615, 1041, 1069, 1202
MmeI	TCCRAC	1 cut(s)	108
MroNI	GCCGGC	1 cut(s)	37
MroXI	GAANNNNTTC	2 cut(s)	173, 834
MseI	TTAA	3 cut(s)	336, 1088, 1235
MslI	CAYNNNNRTG	1 cut(s)	747
MspCI	CTTAAG	1 cut(s)	1087
MspI	CCGG	3 cut(s)	38, 241, 1075
MspR9I	CCNGG	3 cut(s)	230, 1075, 1320
MunI	CAATTG	1 cut(s)	504
Mva1269I	GAATGC	1 cut(s)	788
MvaI	CCWGG	2 cut(s)	230, 1320
MvnI	CGCG	3 cut(s)	101, 1186, 1305
MwoI	GCNNNNNNNGC	7 cut(s)	43, 47, 77, 80, 178, 473, 794
NaeI	GCCGGC	1 cut(s)	39
NciI	CCSGG	1 cut(s)	1075
NcoI	CCATGG	1 cut(s)	315
NdeII	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
NgoMIV	GCCGGC	1 cut(s)	37
NheI	GCTAGC	1 cut(s)	847
NlaIII	CATG	8 cut(s)	319, 415, 454, 520, 785, 797, 1015, 1280
NlaIV	GGNNCC	6 cut(s)	259, 327, 610, 1009, 1172, 1317
NmuCI	GTSAC	4 cut(s)	429, 512, 697, 1130
NsbI	TGCGCA	2 cut(s)	472, 802
NspI	RCATGY	2 cut(s)	454, 1280
PaeR7I	CTCGAG	1 cut(s)	271
PciI	ACATGT	2 cut(s)	450, 1276
PciSI	GCTCTTC	1 cut(s)	840
PcsI	WCGNNNNNNNCGW	1 cut(s)	120
PctI	GAATGC	1 cut(s)	788
PdiI	GCCGGC	1 cut(s)	39
PdmI	GAANNNNTTC	2 cut(s)	173, 834
PfeI	GAWTC	3 cut(s)	6, 394, 1249
PflFI	GACNNNGTC	1 cut(s)	215
PfoI	TCCNGGA	1 cut(s)	1073
PkrI	GCNGC	9 cut(s)	45, 73, 76, 79, 82, 475, 526, 787, 1126
PpuMI	RGGWCCY	1 cut(s)	1171
PscI	ACATGT	2 cut(s)	450, 1276
Psp124BI	GAGCTC	1 cut(s)	52
Psp5II	RGGWCCY	1 cut(s)	1171
Psp6I	CCWGG	2 cut(s)	228, 1318
PspGI	CCWGG	2 cut(s)	228, 1318
PspN4I	GGNNCC	6 cut(s)	259, 327, 610, 1009, 1172, 1317
PspPI	GGNCC	3 cut(s)	325, 1171, 1316
PspPPI	RGGWCCY	1 cut(s)	1171
PspXI	VCTCGAGB	1 cut(s)	271
PstNI	CAGNNNCTG	2 cut(s)	479, 549
PsyI	GACNNNGTC	1 cut(s)	215
RsaI	GTAC	4 cut(s)	65, 134, 344, 441
RsaNI	GTAC	4 cut(s)	64, 133, 343, 440
RseI	CAYNNNNRTG	1 cut(s)	747
SacI	GAGCTC	1 cut(s)	52
SapI	GCTCTTC	1 cut(s)	840
SaqAI	TTAA	3 cut(s)	336, 1088, 1235
SatI	GCNGC	9 cut(s)	44, 72, 75, 78, 81, 474, 525, 786, 1125
Sau3AI	GATC	7 cut(s)	354, 385, 490, 662, 871, 1108, 1261
Sau96I	GGNCC	3 cut(s)	325, 1171, 1316
ScrFI	CCNGG	3 cut(s)	230, 1075, 1320
SduI	GDGCHC	2 cut(s)	52, 260
SfaNI	GCATC	4 cut(s)	178, 195, 834, 984
Sfr274I	CTCGAG	1 cut(s)	271
SinI	GGWCC	1 cut(s)	1171
SlaI	CTCGAG	1 cut(s)	271
SmiMI	CAYNNNNRTG	1 cut(s)	747
SmlI	CTYRAG	2 cut(s)	271, 1087
SmoI	CTYRAG	2 cut(s)	271, 1087
Sse9I	AATT	6 cut(s)	148, 504, 615, 1041, 1069, 1202
SsiI	CCGC	4 cut(s)	61, 71, 77, 80
SspI	AATATT	1 cut(s)	737
SspMI	CTAG	1 cut(s)	848
SstI	GAGCTC	1 cut(s)	52
StyD4I	CCNGG	3 cut(s)	228, 1073, 1318
StyI	CCWWGG	3 cut(s)	315, 435, 1029
TaaI	ACNGT	2 cut(s)	775, 929
TaiI	ACGT	2 cut(s)	126, 1246
TaqI	TCGA	4 cut(s)	210, 272, 388, 493
TasI	AATT	6 cut(s)	148, 504, 615, 1041, 1069, 1202
TatI	WGTACW	2 cut(s)	132, 342
TauI	GCSGC	3 cut(s)	74, 80, 83
TfiI	GAWTC	3 cut(s)	6, 394, 1249
Tru1I	TTAA	3 cut(s)	336, 1088, 1235
Tru9I	TTAA	3 cut(s)	336, 1088, 1235
TscAI	CASTG	3 cut(s)	35, 163, 1062
TseFI	GTSAC	4 cut(s)	429, 512, 697, 1130
TseI	GCWGC	6 cut(s)	43, 74, 473, 524, 785, 1124
Tsp45I	GTSAC	4 cut(s)	429, 512, 697, 1130
TspDTI	ATGAA	6 cut(s)	323, 428, 438, 971, 1052, 1082
TspGWI	ACGGA	3 cut(s)	104, 500, 1201
TspRI	CASTG	3 cut(s)	35, 163, 1062
Tth111I	GACNNNGTC	1 cut(s)	215
Vha464I	CTTAAG	1 cut(s)	1087
VpaK11BI	GGWCC	1 cut(s)	1171
XapI	RAATTY	1 cut(s)	1069
XceI	RCATGY	2 cut(s)	454, 1280
XcmI	CCANNNNNNNNNTGG	1 cut(s)	20
XhoI	CTCGAG	1 cut(s)	271
XmnI	GAANNNNTTC	2 cut(s)	173, 834
XspI	CTAG	1 cut(s)	848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.