Rroxscaffold_2G00078830

Pentatricopeptide repeat-containing protein At4g35850

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0003017
Physical Location & Seq
Reverse (-)
2010578 .. 2015197
4620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00078830.1

Sequence Viewer

Length: 1350 bp
ATGACACTCCTCCGATCAATTTCCGGTGCTTCCCACCGGTCACTATTTCTTCGTGCCATCGGCCGGCGACACCTGGCTTCTACTCCGGCTCCGGCTCAGACGGAGGAATACAAGAGGAGAAACTACGCCAACAATGTCACGGAGTACAACGGCGTCGTTAACTCCATCACTGCGCAGAGAAGGTTCTCTTTTCTTCTGAGAGACGTCTACGACGACATGTCGCTCGACGGAGTCCAGCCGGACCGAGACACCTTCCACTCGCTCATTTTGGGGTCCATGAAAGGGGCTCGCTTGCAGGACGCGTTCTACTTCACCGAGCAGATGAAATCCATGGGCTTGGTTCCTGATGTCAATTCGTACAACATGTTGATTTCGGTGTGTGGGAAGTGCAAGAACTCGGAGCAGGCGATTCAGATATTGGAGGAAATGAAGAAGTATAAAGTGAAGCCGATGGTGCAAACCTACATGTGTCTCCTCAATGCATGTGCAGCTTCTGGCCGTCTAGATCAAGTGTATGCAATTGTCCGCGACATGACTGCGGCTGGTCTTGGGTTAAACAAGTTTTGCTATGCGGGACTTATAACTGCACTGAGGAACAAGACACCCTTACCAGATGATTATGCTGCCAAAATTATAGAGTTTGTGGAGCGGTCAAAAGAGTGGTCATCGGTGGAAGCTTCAAGTGAAACAGCTCAAAATGTAATGACGGGGGTAACAGAAGAGGAGTTGTATAACATGCCAACAGCTGAGTATATTAATAGGCGTGGATTTTTGAATAGGCCACTAACTGTGTATCATGTTGCATTTCATGCTTGTGCGGACCTTCGAAATGTTGAGGTGATGGAAGCTCTTTTGGACATGCTAAAAAAGGATGGGAAGTTTCCTGATACCTATATTGTGATTCAAACTATGAGATGCTATTTGAACTGTGGGGATATTGATCGTGGTTGGCAAACACTTGATGAATATCTGAAGTCAGGAAGGCCTCCTGTACCAGAACTCTATACAACACTTGCAGAGGGCGCCATGATTGGATATACTCCCAAGGGAATGCAAATTGCCCAAAAGGCATTGGAAGATATGAATTCCAGGAACTTTTACTTGCTCCCAAGACAAGGGACTGATCTTCTCCTTGCAGCTGCCGGTGAAAAGACTGGAGGTTATACTACTGCAAACTATATATGGGACTTGATGCAAGCTCGTAAAGTAACTCCTCAACTTCCTGCAGTAGAAGCATATTACAATGGCTTGAAAGAACGCGAGATTCCTGCTGATGATCCACGACTAGTACTGGTTAAGCGTACTTATGAAAACCTTACTTCGAGATTCAGAGGACGACGACCAAATTAA

Protein Analysis

449

Amino Acids

50.85

Weight (kDa)

8.59

Isoelectric Point (pI)

45.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 68 - 179 2.2e-11 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 69 - 129 3.4e-09 Pentatricopeptide repeat domain
PPR_3 PF13812 107 - 162 1.5e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 111 - 144 7.8e-06 PPR repeat
PPR_2 PF13041 115 - 163 2.3e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 581
AatII GACGTC 1 cut(s) 207
Acc16I TGCGCA 1 cut(s) 174
AccB1I GGYRCC 1 cut(s) 1022
AccBSI CCGCTC 1 cut(s) 649
AccI GTMKAC 1 cut(s) 207
AccII CGCG 3 cut(s) 302, 528, 1260
AciI CCGC 5 cut(s) 526, 539, 572, 649, 818
AclWI GGATC 1 cut(s) 1271
AcoI YGGCCR 2 cut(s) 61, 496
AcsI RAATTY 1 cut(s) 1084
AcuI CTGAAG 1 cut(s) 992
AcyI GRCGYC 3 cut(s) 153, 204, 1023
AfaI GTAC 5 cut(s) 146, 359, 993, 1290, 1303
AfiI CCNNNNNNNGG 3 cut(s) 63, 282, 1115
AflIII ACRYGT 4 cut(s) 216, 300, 363, 465
AgeI ACCGGT 1 cut(s) 36
AgsI TTSAA 5 cut(s) 681, 775, 905, 925, 1252
AhdI GACNNNNNGTC 1 cut(s) 217
AhlI ACTAGT 1 cut(s) 1285
AjnI CCWGG 2 cut(s) 72, 1088
AluBI AGCT 7 cut(s) 491, 677, 692, 746, 848, 1139, 1199
AluI AGCT 7 cut(s) 491, 677, 692, 746, 848, 1139, 1199
Alw26I GTCTC 3 cut(s) 195, 240, 476
AlwI GGATC 1 cut(s) 1271
AlwNI CAGNNNCTG 1 cut(s) 494
AoxI GGCC 4 cut(s) 61, 496, 779, 983
ApeKI GCWGC 4 cut(s) 488, 623, 1136, 1139
ApoI RAATTY 1 cut(s) 1084
ArsI GACNNNNNNTTYG 2 cut(s) 647, 679
AseI ATTAAT 1 cut(s) 756
AsiGI ACCGGT 1 cut(s) 36
AspLEI GCGC 2 cut(s) 175, 1025
AspS9I GGNCC 3 cut(s) 241, 273, 820
AsuHPI GGTGA 3 cut(s) 304, 850, 1157
AsuII TTCGAA 1 cut(s) 826
AvaII GGWCC 3 cut(s) 241, 273, 820
BanI GGYRCC 1 cut(s) 1022
BanII GRGCYC 1 cut(s) 289
BbvI GCAGC 4 cut(s) 500, 610, 1126, 1148
BccI CCATC 5 cut(s) 65, 173, 445, 835, 866
BceAI ACGGC 2 cut(s) 166, 483
BcgI CGANNNNNNTGC 4 cut(s) 518, 552, 1250, 1284
BciT130I CCWGG 2 cut(s) 74, 1090
BcoDI GTCTC 3 cut(s) 195, 240, 476
BcuI ACTAGT 1 cut(s) 1285
BfaI CTAG 2 cut(s) 503, 1286
BfmI CTRYAG 1 cut(s) 1224
BfoI RGCGCY 1 cut(s) 1026
BglI GCCNNNNNGGC 1 cut(s) 1067
BisI GCNGC 5 cut(s) 489, 540, 624, 1137, 1140
BlsI GCNGC 5 cut(s) 490, 541, 625, 1138, 1141
BmcAI AGTACT 1 cut(s) 1290
Bme1390I CCNGG 2 cut(s) 74, 1090
Bme18I GGWCC 3 cut(s) 241, 273, 820
BmeRI GACNNNNNGTC 1 cut(s) 217
BmgT120I GGNCC 3 cut(s) 241, 273, 820
BmiI GGNNCC 4 cut(s) 90, 274, 342, 1024
BmrFI CCNGG 2 cut(s) 74, 1090
BmsI GCATC 2 cut(s) 905, 1182
BpmI CTGGAG 1 cut(s) 1176
Bpu14I TTCGAA 1 cut(s) 826
BsaBI GATNNNNATC 2 cut(s) 939, 966
BsaHI GRCGYC 3 cut(s) 153, 204, 1023
BsaJI CCNNGG 2 cut(s) 330, 1044
BsaWI WCCGGW 2 cut(s) 23, 36
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 3 cut(s) 63, 282, 1115
Bse118I RCCGGY 3 cut(s) 36, 63, 1142
Bse1I ACTGG 2 cut(s) 1159, 1296
Bse8I GATNNNNATC 2 cut(s) 939, 966
BseBI CCWGG 2 cut(s) 74, 1090
BseDI CCNNGG 2 cut(s) 330, 1044
BseGI GGATG 1 cut(s) 877
BseJI GATNNNNATC 2 cut(s) 939, 966
BseLI CCNNNNNNNGG 3 cut(s) 63, 282, 1115
BseMII CTCAG 4 cut(s) 110, 188, 581, 738
BseNI ACTGG 2 cut(s) 1159, 1296
BseRI GAGGAG 4 cut(s) 130, 464, 737, 1203
BseX3I CGGCCG 1 cut(s) 61
BseXI GCAGC 4 cut(s) 500, 610, 1126, 1148
BsgI GTGCAG 2 cut(s) 507, 570
Bsh1236I CGCG 3 cut(s) 302, 528, 1260
Bsh1285I CGRYCG 1 cut(s) 64
BshFI GGCC 4 cut(s) 63, 498, 781, 985
BshNI GGYRCC 1 cut(s) 1022
BshTI ACCGGT 1 cut(s) 36
BsiEI CGRYCG 1 cut(s) 64
BsiSI CCGG 7 cut(s) 24, 37, 64, 86, 92, 239, 1143
BslFI GGGAC 3 cut(s) 588, 1132, 1199
BslI CCNNNNNNNGG 3 cut(s) 63, 282, 1115
BsmAI GTCTC 3 cut(s) 195, 240, 476
BsmBI CGTCTC 1 cut(s) 195
BsmFI GGGAC 3 cut(s) 588, 1132, 1199
BsmI GAATGC 1 cut(s) 1056
BsnI GGCC 4 cut(s) 63, 498, 781, 985
Bsp119I TTCGAA 1 cut(s) 826
Bsp1286I GDGCHC 1 cut(s) 289
Bsp143I GATC 5 cut(s) 14, 505, 940, 1123, 1276
Bsp19I CCATGG 1 cut(s) 330
BspACI CCGC 5 cut(s) 526, 539, 572, 649, 818
BspANI GGCC 4 cut(s) 63, 498, 781, 985
BspCNI CTCAG 4 cut(s) 109, 189, 582, 739
BspFNI CGCG 3 cut(s) 302, 528, 1260
BspLI GGNNCC 4 cut(s) 90, 274, 342, 1024
BspMAI CTGCAG 1 cut(s) 1228
BspPI GGATC 1 cut(s) 1271
BspT104I TTCGAA 1 cut(s) 826
BspT107I GGYRCC 1 cut(s) 1022
BsrBI CCGCTC 1 cut(s) 649
BsrFI RCCGGY 3 cut(s) 36, 63, 1142
BsrI ACTGG 2 cut(s) 1159, 1296
BssAI RCCGGY 3 cut(s) 36, 63, 1142
BssECI CCNNGG 2 cut(s) 330, 1044
BssMI GATC 5 cut(s) 14, 505, 940, 1123, 1276
BssNI GRCGYC 3 cut(s) 153, 204, 1023
BssT1I CCWWGG 2 cut(s) 330, 1044
Bst2UI CCWGG 2 cut(s) 74, 1090
Bst4CI ACNGT 2 cut(s) 790, 929
Bst6I CTCTTC 1 cut(s) 714
BstACI GRCGYC 3 cut(s) 153, 204, 1023
BstAPI GCANNNNNTGC 1 cut(s) 809
BstBI TTCGAA 1 cut(s) 826
BstC8I GCNNGC 5 cut(s) 65, 289, 293, 405, 1197
BstDEI CTNAG 4 cut(s) 96, 197, 590, 747
BstDSI CCRYGG 1 cut(s) 330
BstF5I GGATG 1 cut(s) 877
BstFNI CGCG 3 cut(s) 302, 528, 1260
BstH2I RGCGCY 1 cut(s) 1026
BstHHI GCGC 2 cut(s) 175, 1025
BstKTI GATC 5 cut(s) 17, 508, 943, 1126, 1279
BstMAI GTCTC 3 cut(s) 195, 240, 476
BstMBI GATC 5 cut(s) 14, 505, 940, 1123, 1276
BstMCI CGRYCG 1 cut(s) 64
BstMWI GCNNNNNNNGC 6 cut(s) 454, 488, 809, 1022, 1067, 1232
BstNI CCWGG 2 cut(s) 74, 1090
BstNSI RCATGY 6 cut(s) 220, 367, 469, 486, 739, 862
BstSCI CCNGG 2 cut(s) 72, 1088
BstSFI CTRYAG 1 cut(s) 1224
BstUI CGCG 3 cut(s) 302, 528, 1260
BstV1I GCAGC 4 cut(s) 500, 610, 1126, 1148
BstXI CCANNNNNNTGG 1 cut(s) 337
BstZI CGGCCG 1 cut(s) 61
BsuRI GGCC 4 cut(s) 63, 498, 781, 985
BtgI CCRYGG 1 cut(s) 330
BtsCI GGATG 1 cut(s) 877
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 2 cut(s) 168, 587
Cac8I GCNNGC 5 cut(s) 65, 289, 293, 405, 1197
CaiI CAGNNNCTG 1 cut(s) 494
CfoI GCGC 2 cut(s) 175, 1025
Cfr10I RCCGGY 3 cut(s) 36, 63, 1142
Cfr13I GGNCC 3 cut(s) 241, 273, 820
CpoI CGGWCCG 1 cut(s) 241
CseI GACGC 2 cut(s) 142, 308
Csp6I GTAC 5 cut(s) 145, 358, 992, 1289, 1302
CspAI ACCGGT 1 cut(s) 36
CspI CGGWCCG 1 cut(s) 241
CviQI GTAC 5 cut(s) 145, 358, 992, 1289, 1302
DdeI CTNAG 4 cut(s) 96, 197, 590, 747
DinI GGCGCC 1 cut(s) 1024
DpnI GATC 5 cut(s) 16, 507, 942, 1125, 1278
DpnII GATC 5 cut(s) 14, 505, 940, 1123, 1276
DriI GACNNNNNGTC 1 cut(s) 217
EaeI YGGCCR 2 cut(s) 61, 496
EagI CGGCCG 1 cut(s) 61
Eam1104I CTCTTC 1 cut(s) 714
Eam1105I GACNNNNNGTC 1 cut(s) 217
EarI CTCTTC 1 cut(s) 714
EclXI CGGCCG 1 cut(s) 61
Eco130I CCWWGG 2 cut(s) 330, 1044
Eco147I AGGCCT 1 cut(s) 985
Eco24I GRGCYC 1 cut(s) 289
Eco47I GGWCC 3 cut(s) 241, 273, 820
Eco52I CGGCCG 1 cut(s) 61
Eco57I CTGAAG 1 cut(s) 992
EcoRI GAATTC 1 cut(s) 1084
EcoRII CCWGG 2 cut(s) 72, 1088
EcoT14I CCWWGG 2 cut(s) 330, 1044
EcoT22I ATGCAT 1 cut(s) 484
EcoT38I GRGCYC 1 cut(s) 289
EgeI GGCGCC 1 cut(s) 1024
EheI GGCGCC 1 cut(s) 1024
ErhI CCWWGG 2 cut(s) 330, 1044
Esp3I CGTCTC 1 cut(s) 195
FalI AAGNNNNNCTT 4 cut(s) 172, 204, 590, 622
FaqI GGGAC 3 cut(s) 588, 1132, 1199
FauI CCCGC 1 cut(s) 565
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 5 cut(s) 489, 540, 624, 1137, 1140
FokI GGATG 1 cut(s) 884
FriOI GRGCYC 1 cut(s) 289
Fsp4HI GCNGC 5 cut(s) 489, 540, 624, 1137, 1140
FspBI CTAG 2 cut(s) 503, 1286
FspI TGCGCA 1 cut(s) 174
GlaI GCGC 2 cut(s) 174, 1024
GluI GCNGC 5 cut(s) 489, 540, 624, 1137, 1140
GsuI CTGGAG 1 cut(s) 1176
HaeII RGCGCY 1 cut(s) 1026
HaeIII GGCC 4 cut(s) 63, 498, 781, 985
HapII CCGG 7 cut(s) 24, 37, 64, 86, 92, 239, 1143
HgaI GACGC 2 cut(s) 142, 308
HhaI GCGC 2 cut(s) 175, 1025
Hin1I GRCGYC 3 cut(s) 153, 204, 1023
Hin6I GCGC 2 cut(s) 173, 1023
HinP1I GCGC 2 cut(s) 173, 1023
HincII GTYRAC 1 cut(s) 160
HindII GTYRAC 1 cut(s) 160
HindIII AAGCTT 1 cut(s) 675
HinfI GANTC 5 cut(s) 231, 409, 901, 1264, 1326
HpaI GTTAAC 1 cut(s) 160
HpaII CCGG 7 cut(s) 24, 37, 64, 86, 92, 239, 1143
HphI GGTGA 3 cut(s) 304, 850, 1157
Hpy166II GTNNAC 2 cut(s) 160, 208
Hpy188I TCNGA 7 cut(s) 14, 99, 198, 400, 414, 972, 1331
Hpy188III TCNNGA 5 cut(s) 344, 503, 884, 978, 1323
Hpy8I GTNNAC 2 cut(s) 160, 208
Hpy99I CGWCG 4 cut(s) 158, 215, 230, 1341
HpyAV CCTTC 4 cut(s) 174, 262, 833, 975
HpyCH4III ACNGT 2 cut(s) 790, 929
HpyCH4IV ACGT 1 cut(s) 204
HpyF10VI GCNNNNNNNGC 6 cut(s) 454, 488, 809, 1022, 1067, 1232
HpyF3I CTNAG 4 cut(s) 96, 197, 590, 747
HpySE526I ACGT 1 cut(s) 204
Hsp92I GRCGYC 3 cut(s) 153, 204, 1023
HspAI GCGC 2 cut(s) 173, 1023
KasI GGCGCC 1 cut(s) 1022
KroI GCCGGC 1 cut(s) 63
KroNI GCCGGC 1 cut(s) 65
KspAI GTTAAC 1 cut(s) 160
Kzo9I GATC 5 cut(s) 14, 505, 940, 1123, 1276
LmnI GCTCC 4 cut(s) 94, 400, 646, 1110
Lsp1109I GCAGC 4 cut(s) 500, 610, 1126, 1148
LweI GCATC 2 cut(s) 905, 1182
MaeI CTAG 2 cut(s) 503, 1286
MaeII ACGT 1 cut(s) 204
MaeIII GTNAC 4 cut(s) 39, 136, 712, 1207
MalI GATC 5 cut(s) 16, 507, 942, 1125, 1278
MbiI CCGCTC 1 cut(s) 649
MboI GATC 5 cut(s) 14, 505, 940, 1123, 1276
MboII GAAGA 6 cut(s) 41, 185, 442, 731, 1088, 1118
MfeI CAATTG 1 cut(s) 519
MhlI GDGCHC 1 cut(s) 289
MluCI AATT 7 cut(s) 18, 352, 519, 630, 1056, 1084, 1345
MluI ACGCGT 1 cut(s) 300
Mly113I GGCGCC 1 cut(s) 1023
MlyI GAGTC 1 cut(s) 240
Mph1103I ATGCAT 1 cut(s) 484
MroNI GCCGGC 1 cut(s) 63
MseI TTAA 5 cut(s) 159, 554, 756, 1296, 1348
MslI CAYNNNNRTG 1 cut(s) 813
MspA1I CMGCKG 2 cut(s) 746, 1139
MspI CCGG 7 cut(s) 24, 37, 64, 86, 92, 239, 1143
MspR9I CCNGG 2 cut(s) 74, 1090
MunI CAATTG 1 cut(s) 519
Mva1269I GAATGC 1 cut(s) 1056
MvaI CCWGG 2 cut(s) 74, 1090
MvnI CGCG 3 cut(s) 302, 528, 1260
MwoI GCNNNNNNNGC 6 cut(s) 454, 488, 809, 1022, 1067, 1232
NaeI GCCGGC 1 cut(s) 65
NarI GGCGCC 1 cut(s) 1023
NcoI CCATGG 1 cut(s) 330
NdeII GATC 5 cut(s) 14, 505, 940, 1123, 1276
NgoMIV GCCGGC 1 cut(s) 63
NlaIV GGNNCC 4 cut(s) 90, 274, 342, 1024
NmuCI GTSAC 2 cut(s) 39, 136
NsbI TGCGCA 1 cut(s) 174
NsiI ATGCAT 1 cut(s) 484
NspI RCATGY 6 cut(s) 220, 367, 469, 486, 739, 862
NspV TTCGAA 1 cut(s) 826
PceI AGGCCT 1 cut(s) 985
PciI ACATGT 3 cut(s) 216, 363, 465
PcsI WCGNNNNNNNCGW 2 cut(s) 210, 404
PctI GAATGC 1 cut(s) 1056
PdiI GCCGGC 1 cut(s) 65
PfeI GAWTC 4 cut(s) 409, 901, 1264, 1326
PflFI GACNNNGTC 1 cut(s) 230
PfoI TCCNGGA 1 cut(s) 1088
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 5 cut(s) 490, 541, 625, 1138, 1141
PleI GAGTC 1 cut(s) 239
PluTI GGCGCC 1 cut(s) 1026
PpsI GAGTC 1 cut(s) 239
PscI ACATGT 3 cut(s) 216, 363, 465
PshBI ATTAAT 1 cut(s) 756
PsiI TTATAA 1 cut(s) 581
Psp6I CCWGG 2 cut(s) 72, 1088
PspGI CCWGG 2 cut(s) 72, 1088
PspN4I GGNNCC 4 cut(s) 90, 274, 342, 1024
PspPI GGNCC 3 cut(s) 241, 273, 820
PstI CTGCAG 1 cut(s) 1228
PstNI CAGNNNCTG 1 cut(s) 494
PsyI GACNNNGTC 1 cut(s) 230
PvuII CAGCTG 2 cut(s) 746, 1139
RsaI GTAC 5 cut(s) 146, 359, 993, 1290, 1303
RsaNI GTAC 5 cut(s) 145, 358, 992, 1289, 1302
RseI CAYNNNNRTG 1 cut(s) 813
Rsr2I CGGWCCG 1 cut(s) 241
RsrII CGGWCCG 1 cut(s) 241
SaqAI TTAA 5 cut(s) 159, 554, 756, 1296, 1348
SatI GCNGC 5 cut(s) 489, 540, 624, 1137, 1140
Sau3AI GATC 5 cut(s) 14, 505, 940, 1123, 1276
Sau96I GGNCC 3 cut(s) 241, 273, 820
ScaI AGTACT 1 cut(s) 1290
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 2 cut(s) 74, 1090
SduI GDGCHC 1 cut(s) 289
SfaNI GCATC 2 cut(s) 905, 1182
SfcI CTRYAG 1 cut(s) 1224
SfoI GGCGCC 1 cut(s) 1024
SfuI TTCGAA 1 cut(s) 826
SinI GGWCC 3 cut(s) 241, 273, 820
SmiMI CAYNNNNRTG 1 cut(s) 813
SpeI ACTAGT 1 cut(s) 1285
Sse9I AATT 7 cut(s) 18, 352, 519, 630, 1056, 1084, 1345
SseBI AGGCCT 1 cut(s) 985
SsiI CCGC 5 cut(s) 526, 539, 572, 649, 818
SspDI GGCGCC 1 cut(s) 1022
SspMI CTAG 2 cut(s) 503, 1286
StuI AGGCCT 1 cut(s) 985
StyD4I CCNGG 2 cut(s) 72, 1088
StyI CCWWGG 2 cut(s) 330, 1044
TaaI ACNGT 2 cut(s) 790, 929
TaiI ACGT 1 cut(s) 207
TaqI TCGA 3 cut(s) 225, 826, 1322
TaqII GACCGA 1 cut(s) 258
TasI AATT 7 cut(s) 18, 352, 519, 630, 1056, 1084, 1345
TatI WGTACW 2 cut(s) 144, 1288
TauI GCSGC 1 cut(s) 542
TfiI GAWTC 4 cut(s) 409, 901, 1264, 1326
Tru1I TTAA 5 cut(s) 159, 554, 756, 1296, 1348
Tru9I TTAA 5 cut(s) 159, 554, 756, 1296, 1348
TscAI CASTG 2 cut(s) 175, 594
TseFI GTSAC 2 cut(s) 39, 136
TseI GCWGC 4 cut(s) 488, 623, 1136, 1139
Tsp45I GTSAC 2 cut(s) 39, 136
TspDTI ATGAA 7 cut(s) 293, 338, 443, 797, 978, 1097, 1323
TspGWI ACGGA 3 cut(s) 116, 155, 243
TspRI CASTG 2 cut(s) 175, 594
Tth111I GACNNNGTC 1 cut(s) 230
VpaK11BI GGWCC 3 cut(s) 241, 273, 820
VspI ATTAAT 1 cut(s) 756
XapI RAATTY 1 cut(s) 1084
XbaI TCTAGA 1 cut(s) 502
XceI RCATGY 6 cut(s) 220, 367, 469, 486, 739, 862
XmiI GTMKAC 1 cut(s) 207
XspI CTAG 2 cut(s) 503, 1286
ZraI GACGTC 1 cut(s) 205
ZrmI AGTACT 1 cut(s) 1290
Zsp2I ATGCAT 1 cut(s) 484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.