Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003017

Physical Location & Seq

Genomic Coordinates Forward (+)

65577690 .. 65581177

Gene Structure 3488 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0525500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGCCAAAGGAGGTGGACTCTCCATTGATTCAGATCCAATTGGCTACTTGTCCCTCCACAAACCCATAGTCCTCAACTCCTTTCAAGATCAATACCCTAATTCTAGTTCTAGTTCTACTACCCACAAACAACACCTCTCTGGGTTTTCAATGGATCATCACACCCACCAAGCCAGGTCACCACCACCGCCCCAGACTCTGCAATTCTCAGTCAACCTCAACTGCACCGACGACCGAGAAAACTCGCCGCCGCAATCGGACGACAACCAGCGCAAGGTCGTAGACGAGAGGGACTTCTTTGCCGATAACAACAACAAGGCCGAGGAAGCTTCCACTGAGAAAATGGACTTCGACGATGGCCCTTCCGGCATGGAATTCAACGTAAACACTGGGTTAAATCTTCTCATCACAAACACTAGTAGTGACCAGTCAGTTGTGGATGATAGCATTTCGTCGAGCATGGAGGATAAAAGAGCCAAAAGTGAGCTGGCTGTTCTTCAAGCTGAGCTGGAGAGGATGAACGCGGAGAATCAGAGGCTGAGAGAGATGCTTAATCAGGTCACTACCAATTACAATGCTCTACAAGTGCATTTGCTGAGTTTGATGCAAAACCAGAAGGCTGAGAACAGTGTGGAAGTGGAAGTGGAAGAGAAGAAGCTTAATAATGGCAGTGGATCGCAGATGGTGGTTCCGAGGCAGTTTATGGATCTCGGTTTGGCTGCAAATGGGGATGCCGAAGAGCCATCACATTCTTCTTCGGATGAGAGAAGCCGGGAACGGTCTGGATCAGGTGATAATGGAAAGGTTGGTGCTGGGAATGTTGGTGATGAGGGGCCTGCGTTTGATCAGGAGAAGAAGGAATTTGGTCGGGGGATTAGTGGGAGAGAGGAGAGTCCTGATCAACAAACGCAGAGTTGGGGACCTAACAAAGTTCCCAGACTCAATTCTCCAAAGGAGGTTGATCAAACTGAGGCTACAATGAGGAAGGCTCGGGTTTCTGTTAGAGCTCGATCAGAGGCACCCATGATCACTGATGGATGTCAATGGCGTAAGTACGGGCAAAAGATGGCGAAAGGAAACCCATGTCCTCGAGCTTATTACAGATGCACCATGGCTGCTGGTTGCCCAGTTCGAAAACAAGTACAAAGATGTGCTGAAGATAGGACAATCCTCATCACAACATATGAAGGCAATCACAACCACCCATTGCCACCAGCCGCCATGGCAATGGCGTCGACCACTTCATCTGCAGCCCGGATGCTGCTTTCCGGGTCTATGCCAAGCGCAGATGGCCTAATGGACTCAAACTTCCTCACTAGGACCATCCTCCCATGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCTCCATTCCCCACTGTTACATTGGACTTAACACAGTCCCCAAACCCTTTACAGTTCCAAAGGCCACCAGGCCAATTCAACATCCCATTCCCAAACCCGTCTCAGAACTTGACCAATGGACCTGTCTCATTGCTGCCCCAAATCTTCGGTCAGGCGCTCTACAACCAGTCTAAGTTTTCTGGCCTTCAAATGTCACAGGACATGGACCGTAATGCCCAACCTCAACAAGGACAGCAGCAGAACTCATTGGCCGATACTGTTACTGCTGCCACTGCCGCTATCGCATCCGATCCAAACTTCACTGCAGCTCTAGCAGCCGCCATCACCTCCATCATTGGCAATGCTCATCCAAACAACAATGGTAACAATTCCACCACCACCAACAACACAAGCAACAGCAACAGCAATGGAAACAACAGCAGCAAATTGCAACAACAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

602

Amino Acids

65.32

Weight (kDa)

5.3

Isoelectric Point (pI)

46.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	345 - 402	1.2e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35850
fragaria_vesca	FvH4_6g51990
malus_domestica	MD09G1021100.v1.1 MD09G1021300.v1.1 MD17G1021300.v1.1
prunus_persica	Prupe.3G295200_v2.0.a1 Prupe.3G295200_v2.0.a1
pyrus_communis	pycom111g01770 pycom17g01800
rosa_chinensis	RchiOBHm_Chr2g0173461 RchiOBHm_Chr6g0291191
rosa_laevigata	RLG00000022192
rosa_multiflora	Rmu_sc0000580.1_g000120 Rmu_sc0015463.1_g000007 Rmu_sc0028728.1_g000001 Rmu_ssc0000467.1_g000039
rosa_roxburghii	Rroxscaffold_2G00078830 Rroxscaffold_2G00079350 Rroxscaffold_2G00084510
rosa_rugosa	Rorug02G0525500 Rorug02G0568900 Rorug02G0569200 Rorug02G0569500 Rorug02G0570700
rosa_samantha	Rh2AG521200 Rh2AG649100 Rh2BG659700 Rh2CG574600 Rh2CG624900 Rh2DG674800 Rh3DG228100 Rh4CG014600 Rh4CG314700 Rh4DG296000 Rh6AG277500 Rh6AG329100 Rh7BG450100
rosa_wichuraiana	Rw2G053290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1018
AccI	GTMKAC	2 cut(s)	282, 1235
AccII	CGCG	1 cut(s)	524
AciI	CCGC	7 cut(s)	188, 248, 251, 524, 1218, 1641, 1683
AclWI	GGATC	6 cut(s)	29, 162, 682, 714, 793, 1649
AcoI	YGGCCR	3 cut(s)	3, 1347, 1614
AcsI	RAATTY	2 cut(s)	374, 860
AcuI	CTGAAG	1 cut(s)	1176
AcyI	GRCGYC	1 cut(s)	1232
AfaI	GTAC	2 cut(s)	1055, 1143
AfiI	CCNNNNNNNGG	2 cut(s)	274, 1592
AgsI	TTSAA	6 cut(s)	86, 150, 379, 500, 1444, 1553
AhlI	ACTAGT	1 cut(s)	416
AjnI	CCWGG	2 cut(s)	173, 1432
AluBI	AGCT	9 cut(s)	329, 487, 503, 508, 658, 1007, 1094, 1367, 1673
AluI	AGCT	9 cut(s)	329, 487, 503, 508, 658, 1007, 1094, 1367, 1673
Alw21I	GWGCWC	1 cut(s)	1009
Alw26I	GTCTC	2 cut(s)	1470, 1495
AlwI	GGATC	6 cut(s)	29, 162, 682, 714, 793, 1649
AlwNI	CAGNNNCTG	2 cut(s)	199, 538
Ama87I	CYCGRG	2 cut(s)	990, 1089
ApoI	RAATTY	2 cut(s)	374, 860
ArsI	GACNNNNNNTTYG	4 cut(s)	54, 86, 1498, 1530
AspLEI	GCGC	3 cut(s)	273, 1286, 1522
AspS9I	GGNCC	6 cut(s)	359, 833, 920, 1320, 1484, 1570
AsuC2I	CCSGG	3 cut(s)	773, 1255, 1270
AsuHPI	GGTGA	4 cut(s)	171, 803, 836, 1681
AsuII	TTCGAA	1 cut(s)	1132
AvaI	CYCGRG	2 cut(s)	990, 1089
AvaII	GGWCC	4 cut(s)	920, 1320, 1484, 1570
BalI	TGGCCA	2 cut(s)	5, 1349
BanI	GGYRCC	1 cut(s)	1018
BanII	GRGCYC	1 cut(s)	1009
Bbv12I	GWGCWC	1 cut(s)	1009
BbvCI	CCTCAGC	1 cut(s)	1363
BccI	CCATC	9 cut(s)	350, 676, 751, 1028, 1060, 1283, 1331, 1694, 1703
BcgI	CGANNNNNNTGC	2 cut(s)	1215, 1249
BciT130I	CCWGG	2 cut(s)	175, 1434
BclI	TGATCA	4 cut(s)	844, 898, 961, 1026
BcnI	CCSGG	3 cut(s)	773, 1255, 1270
BcoDI	GTCTC	2 cut(s)	1470, 1495
BcuI	ACTAGT	1 cut(s)	416
BfaI	CTAG	5 cut(s)	105, 111, 417, 1317, 1676
BfmI	CTRYAG	2 cut(s)	1248, 1668
BfoI	RGCGCY	1 cut(s)	1523
BglI	GCCNNNNNGGC	2 cut(s)	366, 1223
BlpI	GCTNAGC	1 cut(s)	504
Bme1390I	CCNGG	5 cut(s)	175, 773, 1255, 1270, 1434
Bme18I	GGWCC	4 cut(s)	920, 1320, 1484, 1570
BmeT110I	CYCGRG	2 cut(s)	990, 1089
BmgT120I	GGNCC	6 cut(s)	359, 833, 920, 1320, 1484, 1570
BmiI	GGNNCC	4 cut(s)	690, 834, 921, 1020
BmrFI	CCNGG	5 cut(s)	175, 773, 1255, 1270, 1434
BmrI	ACTGGG	2 cut(s)	399, 1121
BmsI	GCATC	6 cut(s)	537, 594, 721, 1094, 1248, 1658
BmuI	ACTGGG	2 cut(s)	399, 1121
BplI	GAGNNNNNCTC	3 cut(s)	35, 973, 1005
BpmI	CTGGAG	1 cut(s)	530
Bpu10I	CCTNAGC	1 cut(s)	1363
Bpu1102I	GCTNAGC	1 cut(s)	504
Bpu14I	TTCGAA	1 cut(s)	1132
BpuEI	CTTGAG	1 cut(s)	1324
BpuMI	CCSGG	3 cut(s)	773, 1255, 1270
BsaBI	GATNNNNATC	1 cut(s)	33
BsaHI	GRCGYC	1 cut(s)	1232
BsaJI	CCNNGG	4 cut(s)	321, 692, 1110, 1221
Bsc4I	CCNNNNNNNGG	2 cut(s)	274, 1592
Bse1I	ACTGG	4 cut(s)	394, 427, 1127, 1531
Bse3DI	GCAATG	5 cut(s)	1205, 1233, 1493, 1711, 1777
Bse8I	GATNNNNATC	1 cut(s)	33
BseBI	CCWGG	2 cut(s)	175, 1434
BseDI	CCNNGG	4 cut(s)	321, 692, 1110, 1221
BseJI	GATNNNNATC	1 cut(s)	33
BseLI	CCNNNNNNNGG	2 cut(s)	274, 1592
BseMI	GCAATG	5 cut(s)	1205, 1233, 1493, 1711, 1777
BseNI	ACTGG	4 cut(s)	394, 427, 1127, 1531
BseRI	GAGGAG	2 cut(s)	902, 1327
BseYI	CCCAGC	1 cut(s)	812
BsgI	GTGCAG	1 cut(s)	208
Bsh1236I	CGCG	1 cut(s)	524
Bsh1285I	CGRYCG	1 cut(s)	235
BshNI	GGYRCC	1 cut(s)	1018
BsiEI	CGRYCG	1 cut(s)	235
BsiHKAI	GWGCWC	1 cut(s)	1009
BsiHKCI	CYCGRG	2 cut(s)	990, 1089
BsiSI	CCGG	4 cut(s)	366, 772, 1255, 1269
BslFI	GGGAC	4 cut(s)	37, 305, 933, 1387
BslI	CCNNNNNNNGG	2 cut(s)	274, 1592
BsmAI	GTCTC	2 cut(s)	1470, 1495
BsmBI	CGTCTC	1 cut(s)	1470
BsmFI	GGGAC	4 cut(s)	37, 305, 933, 1387
BsoBI	CYCGRG	2 cut(s)	990, 1089
Bsp119I	TTCGAA	1 cut(s)	1132
Bsp1286I	GDGCHC	1 cut(s)	1009
Bsp1720I	GCTNAGC	1 cut(s)	504
Bsp19I	CCATGG	2 cut(s)	1110, 1221
BspACI	CCGC	7 cut(s)	188, 248, 251, 524, 1218, 1641, 1683
BspFNI	CGCG	1 cut(s)	524
BspLI	GGNNCC	4 cut(s)	690, 834, 921, 1020
BspMAI	CTGCAG	2 cut(s)	1252, 1672
BspPI	GGATC	6 cut(s)	29, 162, 682, 714, 793, 1649
BspQI	GCTCTTC	1 cut(s)	732
BspT104I	TTCGAA	1 cut(s)	1132
BspT107I	GGYRCC	1 cut(s)	1018
BsrDI	GCAATG	5 cut(s)	1205, 1233, 1493, 1711, 1777
BsrI	ACTGG	4 cut(s)	394, 427, 1127, 1531
BssECI	CCNNGG	4 cut(s)	321, 692, 1110, 1221
BssNI	GRCGYC	1 cut(s)	1232
BssT1I	CCWWGG	2 cut(s)	1110, 1221
Bst2UI	CCWGG	2 cut(s)	175, 1434
Bst4CI	ACNGT	7 cut(s)	629, 780, 1381, 1401, 1419, 1574, 1624
Bst6I	CTCTTC	2 cut(s)	642, 732
BstACI	GRCGYC	1 cut(s)	1232
BstBI	TTCGAA	1 cut(s)	1132
BstC8I	GCNNGC	2 cut(s)	489, 837
BstDSI	CCRYGG	2 cut(s)	1110, 1221
BstEII	GGTNACC	1 cut(s)	177
BstENI	CCTNNNNNAGG	1 cut(s)	1590
BstFNI	CGCG	1 cut(s)	524
BstH2I	RGCGCY	1 cut(s)	1523
BstHHI	GCGC	3 cut(s)	273, 1286, 1522
BstMAI	GTCTC	2 cut(s)	1470, 1495
BstMCI	CGRYCG	1 cut(s)	235
BstNI	CCWGG	2 cut(s)	175, 1434
BstPI	GGTNACC	1 cut(s)	177
BstSCI	CCNGG	5 cut(s)	173, 771, 1253, 1268, 1432
BstSFI	CTRYAG	2 cut(s)	1248, 1668
BstUI	CGCG	1 cut(s)	524
BstX2I	RGATCY	2 cut(s)	34, 706
BstXI	CCANNNNNNTGG	1 cut(s)	1228
BstYI	RGATCY	2 cut(s)	34, 706
BtgI	CCRYGG	2 cut(s)	1110, 1221
BtsI	GCAGTG	3 cut(s)	676, 1635, 1665
BtsIMutI	CAGTG	8 cut(s)	333, 387, 634, 676, 1029, 1377, 1635, 1665
Cac8I	GCNNGC	2 cut(s)	489, 837
CaiI	CAGNNNCTG	2 cut(s)	199, 538
CfoI	GCGC	3 cut(s)	273, 1286, 1522
Cfr13I	GGNCC	6 cut(s)	359, 833, 920, 1320, 1484, 1570
CseI	GACGC	1 cut(s)	1221
Csp6I	GTAC	2 cut(s)	1054, 1142
CspCI	CAANNNNNGTGG	1 cut(s)	30
CviAII	CATG	9 cut(s)	370, 460, 1024, 1083, 1111, 1222, 1332, 1345, 1567
CviQI	GTAC	2 cut(s)	1054, 1142
EaeI	YGGCCR	3 cut(s)	3, 1347, 1614
Eam1104I	CTCTTC	2 cut(s)	642, 732
EarI	CTCTTC	2 cut(s)	642, 732
Ecl136II	GAGCTC	1 cut(s)	1007
Eco130I	CCWWGG	2 cut(s)	1110, 1221
Eco24I	GRGCYC	1 cut(s)	1009
Eco47I	GGWCC	4 cut(s)	920, 1320, 1484, 1570
Eco53kI	GAGCTC	1 cut(s)	1007
Eco57I	CTGAAG	1 cut(s)	1176
Eco88I	CYCGRG	2 cut(s)	990, 1089
Eco91I	GGTNACC	1 cut(s)	177
EcoICRI	GAGCTC	1 cut(s)	1007
EcoNI	CCTNNNNNAGG	1 cut(s)	1590
EcoO109I	RGGNCCY	2 cut(s)	833, 920
EcoO65I	GGTNACC	1 cut(s)	177
EcoRI	GAATTC	1 cut(s)	374
EcoRII	CCWGG	2 cut(s)	173, 1432
EcoT14I	CCWWGG	2 cut(s)	1110, 1221
EcoT38I	GRGCYC	1 cut(s)	1009
ErhI	CCWWGG	2 cut(s)	1110, 1221
Esp3I	CGTCTC	1 cut(s)	1470
FaeI	CATG	9 cut(s)	373, 463, 1027, 1086, 1114, 1225, 1335, 1348, 1570
FaqI	GGGAC	4 cut(s)	37, 305, 933, 1387
FatI	CATG	9 cut(s)	369, 459, 1023, 1082, 1110, 1221, 1331, 1344, 1566
FauNDI	CATATG	1 cut(s)	1183
FbaI	TGATCA	4 cut(s)	844, 898, 961, 1026
FblI	GTMKAC	2 cut(s)	282, 1235
FriOI	GRGCYC	1 cut(s)	1009
FspBI	CTAG	5 cut(s)	105, 111, 417, 1317, 1676
GlaI	GCGC	3 cut(s)	272, 1285, 1521
GsaI	CCCAGC	1 cut(s)	816
GsuI	CTGGAG	1 cut(s)	530
HaeII	RGCGCY	1 cut(s)	1523
HapII	CCGG	4 cut(s)	366, 772, 1255, 1269
HgaI	GACGC	1 cut(s)	1221
HhaI	GCGC	3 cut(s)	273, 1286, 1522
Hin1I	GRCGYC	1 cut(s)	1232
Hin1II	CATG	9 cut(s)	373, 463, 1027, 1086, 1114, 1225, 1335, 1348, 1570
Hin6I	GCGC	3 cut(s)	271, 1284, 1520
HinP1I	GCGC	3 cut(s)	271, 1284, 1520
HincII	GTYRAC	2 cut(s)	214, 1236
HindII	GTYRAC	2 cut(s)	214, 1236
HindIII	AAGCTT	2 cut(s)	327, 656
HinfI	GANTC	7 cut(s)	18, 29, 196, 529, 892, 939, 1301
HpaII	CCGG	4 cut(s)	366, 772, 1255, 1269
HphI	GGTGA	4 cut(s)	171, 803, 836, 1681
Hpy166II	GTNNAC	5 cut(s)	17, 214, 283, 385, 1236
Hpy188I	TCNGA	8 cut(s)	34, 259, 534, 693, 760, 1015, 1470, 1654
Hpy188III	TCNNGA	4 cut(s)	86, 783, 848, 896
Hpy8I	GTNNAC	5 cut(s)	17, 214, 283, 385, 1236
Hpy99I	CGWCG	4 cut(s)	233, 356, 457, 1237
HpyAV	CCTTC	6 cut(s)	372, 610, 850, 979, 1181, 1559
HpyCH4III	ACNGT	7 cut(s)	629, 780, 1381, 1401, 1419, 1574, 1624
HpyCH4IV	ACGT	1 cut(s)	381
HpyCH4V	TGCA	9 cut(s)	202, 225, 589, 607, 722, 1107, 1250, 1670, 1795
HpySE526I	ACGT	1 cut(s)	381
Hsp92I	GRCGYC	1 cut(s)	1232
Hsp92II	CATG	9 cut(s)	373, 463, 1027, 1086, 1114, 1225, 1335, 1348, 1570
HspAI	GCGC	3 cut(s)	271, 1284, 1520
Ksp22I	TGATCA	4 cut(s)	844, 898, 961, 1026
LguI	GCTCTTC	1 cut(s)	732
LmnI	GCTCC	2 cut(s)	1340, 1372
LweI	GCATC	6 cut(s)	537, 594, 721, 1094, 1248, 1658
MaeI	CTAG	5 cut(s)	105, 111, 417, 1317, 1676
MaeII	ACGT	1 cut(s)	381
MaeIII	GTNAC	7 cut(s)	177, 422, 559, 1381, 1557, 1624, 1727
MfeI	CAATTG	1 cut(s)	39
MflI	RGATCY	2 cut(s)	34, 706
MhlI	GDGCHC	1 cut(s)	1009
MlsI	TGGCCA	2 cut(s)	5, 1349
MluNI	TGGCCA	2 cut(s)	5, 1349
MlyI	GAGTC	5 cut(s)	12, 190, 901, 933, 1295
Mox20I	TGGCCA	2 cut(s)	5, 1349
MscI	TGGCCA	2 cut(s)	5, 1349
MseI	TTAA	4 cut(s)	395, 552, 660, 1394
MslI	CAYNNNNRTG	1 cut(s)	1226
Msp20I	TGGCCA	2 cut(s)	5, 1349
MspI	CCGG	4 cut(s)	366, 772, 1255, 1269
MspR9I	CCNGG	5 cut(s)	175, 773, 1255, 1270, 1434
MunI	CAATTG	1 cut(s)	39
MvaI	CCWGG	2 cut(s)	175, 1434
MvnI	CGCG	1 cut(s)	524
NciI	CCSGG	3 cut(s)	773, 1255, 1270
NcoI	CCATGG	2 cut(s)	1110, 1221
NdeI	CATATG	1 cut(s)	1183
NlaIII	CATG	9 cut(s)	373, 463, 1027, 1086, 1114, 1225, 1335, 1348, 1570
NlaIV	GGNNCC	4 cut(s)	690, 834, 921, 1020
NmeAIII	GCCGAG	1 cut(s)	346
NmuCI	GTSAC	4 cut(s)	177, 422, 559, 1557
NspV	TTCGAA	1 cut(s)	1132
PaeR7I	CTCGAG	1 cut(s)	1089
PciSI	GCTCTTC	1 cut(s)	732
PfeI	GAWTC	2 cut(s)	29, 529
PleI	GAGTC	5 cut(s)	12, 190, 900, 933, 1295
PpsI	GAGTC	5 cut(s)	12, 190, 900, 933, 1295
PpuMI	RGGWCCY	1 cut(s)	920
Psp124BI	GAGCTC	1 cut(s)	1009
Psp5II	RGGWCCY	1 cut(s)	920
Psp6I	CCWGG	2 cut(s)	173, 1432
PspEI	GGTNACC	1 cut(s)	177
PspFI	CCCAGC	1 cut(s)	812
PspGI	CCWGG	2 cut(s)	173, 1432
PspN4I	GGNNCC	4 cut(s)	690, 834, 921, 1020
PspPI	GGNCC	6 cut(s)	359, 833, 920, 1320, 1484, 1570
PspPPI	RGGWCCY	1 cut(s)	920
PspXI	VCTCGAGB	1 cut(s)	1089
PstI	CTGCAG	2 cut(s)	1252, 1672
PstNI	CAGNNNCTG	2 cut(s)	199, 538
PsuI	RGATCY	2 cut(s)	34, 706
RsaI	GTAC	2 cut(s)	1055, 1143
RsaNI	GTAC	2 cut(s)	1054, 1142
RseI	CAYNNNNRTG	1 cut(s)	1226
SacI	GAGCTC	1 cut(s)	1009
SalI	GTCGAC	1 cut(s)	1234
SapI	GCTCTTC	1 cut(s)	732
SaqAI	TTAA	4 cut(s)	395, 552, 660, 1394
Sau96I	GGNCC	6 cut(s)	359, 833, 920, 1320, 1484, 1570
SchI	GAGTC	5 cut(s)	12, 190, 901, 933, 1295
ScrFI	CCNGG	5 cut(s)	175, 773, 1255, 1270, 1434
SduI	GDGCHC	1 cut(s)	1009
SfaNI	GCATC	6 cut(s)	537, 594, 721, 1094, 1248, 1658
SfcI	CTRYAG	2 cut(s)	1248, 1668
Sfr274I	CTCGAG	1 cut(s)	1089
SfuI	TTCGAA	1 cut(s)	1132
SinI	GGWCC	4 cut(s)	920, 1320, 1484, 1570
SlaI	CTCGAG	1 cut(s)	1089
SmiMI	CAYNNNNRTG	1 cut(s)	1226
SmlI	CTYRAG	2 cut(s)	1089, 1339
SmoI	CTYRAG	2 cut(s)	1089, 1339
SpeI	ACTAGT	1 cut(s)	416
SsiI	CCGC	7 cut(s)	188, 248, 251, 524, 1218, 1641, 1683
SspMI	CTAG	5 cut(s)	105, 111, 417, 1317, 1676
SstI	GAGCTC	1 cut(s)	1009
StyD4I	CCNGG	5 cut(s)	173, 771, 1253, 1268, 1432
StyI	CCWWGG	2 cut(s)	1110, 1221
TaaI	ACNGT	7 cut(s)	629, 780, 1381, 1401, 1419, 1574, 1624
TaiI	ACGT	1 cut(s)	384
TaqI	TCGA	6 cut(s)	351, 455, 1009, 1090, 1132, 1235
TaqII	GACCGA	2 cut(s)	249, 1502
TatI	WGTACW	1 cut(s)	1141
TauI	GCSGC	5 cut(s)	250, 253, 1220, 1643, 1685
TfiI	GAWTC	2 cut(s)	29, 529
Tru1I	TTAA	4 cut(s)	395, 552, 660, 1394
Tru9I	TTAA	4 cut(s)	395, 552, 660, 1394
TscAI	CASTG	8 cut(s)	340, 394, 634, 676, 1036, 1384, 1642, 1672
TseFI	GTSAC	4 cut(s)	177, 422, 559, 1557
Tsp45I	GTSAC	4 cut(s)	177, 422, 559, 1557
TspDTI	ATGAA	3 cut(s)	533, 1200, 1233
TspRI	CASTG	8 cut(s)	340, 394, 634, 676, 1036, 1384, 1642, 1672
VpaK11BI	GGWCC	4 cut(s)	920, 1320, 1484, 1570
XagI	CCTNNNNNAGG	1 cut(s)	1590
XapI	RAATTY	2 cut(s)	374, 860
XcmI	CCANNNNNNNNNTGG	3 cut(s)	340, 484, 1384
XhoI	CTCGAG	1 cut(s)	1089
XmiI	GTMKAC	2 cut(s)	282, 1235
XspI	CTAG	5 cut(s)	105, 111, 417, 1317, 1676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.