Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003017

Physical Location & Seq

Genomic Coordinates Forward (+)

69455759 .. 69457288

Gene Structure 1530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0569200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGTCTCCGGTTGGAAGAGAGAAGAAAGTTAACCTCTTTCTAGTACTCGCAGCGCTACAGAGAGATTCGTATACTACTTACAACGATGCCATCTTGAACGGGCTAGAAATCTTCAAGCTCAGCGACTCGACTCGGAATCTTGCCGGACCCAACCCCGACCCACCTCCGGTGAAAGCCCCAAAGGTACCACCGAAGAGCACCAGTAAGAAGAAGTCTACTCCTATGGCAGCTATCATTGCAGGCGTAGTTTCCGGGTTACTTATGCTCTCTGTTCTCGGATTTTTTGTTTTCCGGCGAGGGAGAAAGGCCAAGGATTATAGCTCAAGTCAAGTAAAGTGGGGTCTGCTTTCTTTTTCAACGACTGCTAAGTCCACCACGTCTTACGGTTCATCTCTGCCGTCCGAGCTGTGTCATCACTTTTCATTGGCGGAGATCAGAGCCGCCACGCAAAACTTTGATGATTCGAACGTTATTGGGCGTGGCGGATTTGGTAACGTGTACAAAGGTACCATCAACGGTGAGTCCTCCCCCTTCGCCATCAAACGGCTGAAAGCGGAGTCGTCACAGGGTGCCCTTGAGTTCAAGACGGAGATCGAATTGCTCTCCCAACTCCGTCACGTCCATCTCGTGTCTCTGGTCGGGTACTGTGACGACAACGGCGAGATGATTTTGGTGTATGACTATATGGAAAATGGGACCCTACGCGATCATTTGTACAACTCCGAAAATTCACCTCTTCCTTGGGAACAAAGGCTTCAAGTTTGTATTGGTGCGGCGCGCGGGTTGCACTACCTTCACACTGGTGTCAAGTGCATGATCATTCACCGAGACGTGAAGAGCACGAACATCTTGTTGGACGATAAATGGGTGGCCAAGGTCGCTGATTTCGGGTTGTCGAAAATGGGCACGACCACCATGTCTAAGACCCACATCAGCACCATGGTCAAGGGTAGTTTCGGCTATCTCGACCCGGAGTACTATCGTCGTCAACAGTTGACTGAGAAGTCTGATGTGTACTCATTCGGAGTAGTATTGTGTGAGGTGTTGTGTGCTAGGCCGGCTTTGATCCGTACAGCGGACAAGAAGCAAATGAACCTAGCTGCATGGTTTAAGACCTGTCATGAAAACGGAACGCTTGACCAAATCATTGACCCCAATTTGAGGGGTAAGATTGTAAATGAGTGCTTGAACAAGTTTGTTGAAATTGCAATTAGTTGTATGCATGATAATGGGAGTGAACGACCGTCCATGAATGATGTTATATGGGCACTTGATTGTGCATTAAAACCTCAACAGACCGCAGAGGGTTCGGATTTGGATTTCAATGCCGGGAAGAAGGGTGAAGATGAGGCTTCAGTGCTGAATGATAGTGATGCAGGGTTTAGTGGCACATGGGAAGACTCGTCAGGTTCCAAGAACAGCAGGGTGACCAAAACTAGTAGTAGTTACCAAAATTCTACTGCTAGTGATTCCATTAAAGGGCTGTCAGGTACAGTCTTTTCTGAGATCTACGATCCCAATGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

509

Amino Acids

55.92

Weight (kDa)

7.93

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	154 - 420	7.1e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	156 - 421	3.9e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35850
fragaria_vesca	FvH4_6g51990
malus_domestica	MD09G1021100.v1.1 MD09G1021300.v1.1 MD17G1021300.v1.1
prunus_persica	Prupe.3G295200_v2.0.a1 Prupe.3G295200_v2.0.a1
pyrus_communis	pycom111g01770 pycom17g01800
rosa_chinensis	RchiOBHm_Chr2g0173461 RchiOBHm_Chr6g0291191
rosa_laevigata	RLG00000022192
rosa_multiflora	Rmu_sc0000580.1_g000120 Rmu_sc0015463.1_g000007 Rmu_sc0028728.1_g000001 Rmu_ssc0000467.1_g000039
rosa_roxburghii	Rroxscaffold_2G00078830 Rroxscaffold_2G00079350 Rroxscaffold_2G00084510
rosa_rugosa	Rorug02G0525500 Rorug02G0568900 Rorug02G0569200 Rorug02G0569500 Rorug02G0570700
rosa_samantha	Rh2AG521200 Rh2AG649100 Rh2BG659700 Rh2CG574600 Rh2CG624900 Rh2DG674800 Rh3DG228100 Rh4CG014600 Rh4CG314700 Rh4DG296000 Rh6AG277500 Rh6AG329100 Rh7BG450100
rosa_wichuraiana	Rw2G053290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	367, 916, 1003
Acc65I	GGTACC	2 cut(s)	184, 506
AccB1I	GGYRCC	3 cut(s)	184, 506, 569
AccI	GTMKAC	2 cut(s)	71, 215
AccII	CGCG	3 cut(s)	705, 778, 780
AciI	CCGC	8 cut(s)	428, 441, 483, 554, 773, 780, 1076, 1299
AclI	AACGTT	1 cut(s)	468
AclWI	GGATC	2 cut(s)	1060, 1508
AcoI	YGGCCR	1 cut(s)	870
AcsI	RAATTY	2 cut(s)	727, 1453
AcuI	CTGAAG	1 cut(s)	1338
AdeI	CACNNNGTG	1 cut(s)	569
AfeI	AGCGCT	1 cut(s)	54
AfiI	CCNNNNNNNGG	5 cut(s)	166, 543, 1075, 1161, 1479
AflIII	ACRYGT	1 cut(s)	495
AgsI	TTSAA	8 cut(s)	97, 115, 357, 583, 758, 1189, 1202, 1324
AhlI	ACTAGT	1 cut(s)	1436
AjiI	CACGTC	3 cut(s)	378, 619, 832
AjuI	GAANNNNNNNTTGG	2 cut(s)	836, 868
AleI	CACNNNNGTG	1 cut(s)	801
AluBI	AGCT	5 cut(s)	118, 230, 321, 406, 1100
AluI	AGCT	5 cut(s)	118, 230, 321, 406, 1100
Alw21I	GWGCWC	2 cut(s)	200, 842
Alw26I	GTCTC	3 cut(s)	9, 636, 822
AlwI	GGATC	2 cut(s)	1060, 1508
Aor51HI	AGCGCT	1 cut(s)	54
AoxI	GGCC	3 cut(s)	306, 870, 1055
ApeKI	GCWGC	3 cut(s)	50, 227, 1100
ApoI	RAATTY	2 cut(s)	727, 1453
Asp718I	GGTACC	2 cut(s)	184, 506
AspLEI	GCGC	3 cut(s)	55, 778, 780
AspS9I	GGNCC	2 cut(s)	146, 696
AsuC2I	CCSGG	3 cut(s)	253, 971, 1330
AsuHPI	GGTGA	6 cut(s)	181, 530, 723, 815, 1352, 1438
AsuII	TTCGAA	1 cut(s)	464
AvaII	GGWCC	2 cut(s)	146, 696
BaeGI	GKGCMC	3 cut(s)	574, 908, 1270
BaeI	ACNNNNGTAYC	2 cut(s)	490, 523
BalI	TGGCCA	1 cut(s)	872
BanI	GGYRCC	3 cut(s)	184, 506, 569
BauI	CACGAG	1 cut(s)	626
BbsI	GAAGAC	1 cut(s)	1404
Bbv12I	GWGCWC	2 cut(s)	200, 842
BbvI	GCAGC	3 cut(s)	62, 239, 1087
BccI	CCATC	4 cut(s)	98, 518, 545, 630
BceAI	ACGGC	3 cut(s)	382, 560, 673
BcgI	CGANNNNNNTGC	2 cut(s)	1290, 1324
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	3 cut(s)	253, 971, 1330
BcoDI	GTCTC	3 cut(s)	9, 636, 822
BcuI	ACTAGT	1 cut(s)	1436
BfaI	CTAG	6 cut(s)	41, 104, 1053, 1097, 1437, 1464
BfmI	CTRYAG	1 cut(s)	56
BfoI	RGCGCY	1 cut(s)	56
BglII	AGATCT	1 cut(s)	1506
BisI	GCNGC	5 cut(s)	51, 228, 441, 774, 1101
BlpI	GCTNAGC	1 cut(s)	119
BlsI	GCNGC	5 cut(s)	52, 229, 442, 775, 1102
BmcAI	AGTACT	2 cut(s)	45, 977
Bme1390I	CCNGG	3 cut(s)	253, 971, 1330
Bme18I	GGWCC	2 cut(s)	146, 696
BmgBI	CACGTC	3 cut(s)	378, 619, 832
BmgT120I	GGNCC	2 cut(s)	146, 696
BmiI	GGNNCC	7 cut(s)	148, 186, 508, 571, 697, 698, 1411
BmrFI	CCNGG	3 cut(s)	253, 971, 1330
BmsI	GCATC	2 cut(s)	76, 1363
BpiI	GAAGAC	1 cut(s)	1404
Bpu1102I	GCTNAGC	1 cut(s)	119
Bpu14I	TTCGAA	1 cut(s)	464
BpuEI	CTTGAG	2 cut(s)	307, 596
BpuMI	CCSGG	3 cut(s)	253, 971, 1330
BsaJI	CCNNGG	4 cut(s)	309, 740, 873, 939
BsaWI	WCCGGW	2 cut(s)	7, 166
Bsc4I	CCNNNNNNNGG	5 cut(s)	166, 543, 1075, 1161, 1479
Bse118I	RCCGGY	1 cut(s)	1057
Bse1I	ACTGG	2 cut(s)	201, 805
Bse3DI	GCAATG	1 cut(s)	234
BseDI	CCNNGG	4 cut(s)	309, 740, 873, 939
BseLI	CCNNNNNNNGG	5 cut(s)	166, 543, 1075, 1161, 1479
BseMI	GCAATG	1 cut(s)	234
BseMII	CTCAG	3 cut(s)	133, 990, 1494
BseNI	ACTGG	2 cut(s)	201, 805
BsePI	GCGCGC	1 cut(s)	776
BseSI	GKGCMC	3 cut(s)	574, 908, 1270
BseXI	GCAGC	3 cut(s)	62, 239, 1087
Bsh1236I	CGCG	3 cut(s)	705, 778, 780
Bsh1285I	CGRYCG	1 cut(s)	1244
BshFI	GGCC	3 cut(s)	308, 872, 1057
BshNI	GGYRCC	3 cut(s)	184, 506, 569
BsiEI	CGRYCG	1 cut(s)	1244
BsiHKAI	GWGCWC	2 cut(s)	200, 842
BsiSI	CCGG	8 cut(s)	8, 144, 167, 252, 292, 971, 1058, 1329
BslFI	GGGAC	1 cut(s)	709
BslI	CCNNNNNNNGG	5 cut(s)	166, 543, 1075, 1161, 1479
BsmAI	GTCTC	3 cut(s)	9, 636, 822
BsmBI	CGTCTC	1 cut(s)	822
BsmFI	GGGAC	1 cut(s)	709
BsnI	GGCC	3 cut(s)	308, 872, 1057
Bsp119I	TTCGAA	1 cut(s)	464
Bsp1286I	GDGCHC	5 cut(s)	200, 574, 842, 908, 1270
Bsp1407I	TGTACA	2 cut(s)	498, 714
Bsp143I	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
Bsp1720I	GCTNAGC	1 cut(s)	119
Bsp19I	CCATGG	1 cut(s)	939
BspACI	CCGC	8 cut(s)	428, 441, 483, 554, 773, 780, 1076, 1299
BspANI	GGCC	3 cut(s)	308, 872, 1057
BspCNI	CTCAG	3 cut(s)	132, 991, 1495
BspFNI	CGCG	3 cut(s)	705, 778, 780
BspHI	TCATGA	1 cut(s)	1120
BspLI	GGNNCC	7 cut(s)	148, 186, 508, 571, 697, 698, 1411
BspPI	GGATC	2 cut(s)	1060, 1508
BspQI	GCTCTTC	2 cut(s)	188, 830
BspT104I	TTCGAA	1 cut(s)	464
BspT107I	GGYRCC	3 cut(s)	184, 506, 569
BsrDI	GCAATG	1 cut(s)	234
BsrFI	RCCGGY	1 cut(s)	1057
BsrGI	TGTACA	2 cut(s)	498, 714
BsrI	ACTGG	2 cut(s)	201, 805
BssAI	RCCGGY	1 cut(s)	1057
BssECI	CCNNGG	4 cut(s)	309, 740, 873, 939
BssHII	GCGCGC	1 cut(s)	776
BssMI	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
BssNAI	GTATAC	1 cut(s)	72
BssSI	CACGAG	1 cut(s)	626
BssT1I	CCWWGG	4 cut(s)	309, 740, 873, 939
Bst1107I	GTATAC	1 cut(s)	72
Bst2BI	CACGAG	1 cut(s)	626
Bst4CI	ACNGT	6 cut(s)	386, 518, 647, 993, 1245, 1495
Bst6I	CTCTTC	4 cut(s)	10, 188, 741, 830
BstAUI	TGTACA	2 cut(s)	498, 714
BstBI	TTCGAA	1 cut(s)	464
BstC8I	GCNNGC	3 cut(s)	241, 778, 1059
BstDEI	CTNAG	5 cut(s)	119, 366, 921, 999, 1503
BstDSI	CCRYGG	1 cut(s)	939
BstEII	GGTNACC	1 cut(s)	1426
BstFNI	CGCG	3 cut(s)	705, 778, 780
BstH2I	RGCGCY	1 cut(s)	56
BstHHI	GCGC	3 cut(s)	55, 778, 780
BstKTI	GATC	7 cut(s)	435, 594, 709, 819, 1068, 1509, 1516
BstMAI	GTCTC	3 cut(s)	9, 636, 822
BstMBI	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
BstMCI	CGRYCG	1 cut(s)	1244
BstMWI	GCNNNNNNNGC	5 cut(s)	236, 403, 784, 878, 1058
BstPI	GGTNACC	1 cut(s)	1426
BstSCI	CCNGG	3 cut(s)	251, 969, 1328
BstSFI	CTRYAG	1 cut(s)	56
BstSLI	GKGCMC	3 cut(s)	574, 908, 1270
BstUI	CGCG	3 cut(s)	705, 778, 780
BstV1I	GCAGC	3 cut(s)	62, 239, 1087
BstV2I	GAAGAC	1 cut(s)	1404
BstX2I	RGATCY	1 cut(s)	1506
BstYI	RGATCY	1 cut(s)	1506
BstZ17I	GTATAC	1 cut(s)	72
BsuRI	GGCC	3 cut(s)	308, 872, 1057
BtgI	CCRYGG	1 cut(s)	939
BtrI	CACGTC	3 cut(s)	378, 619, 832
BtsIMutI	CAGTG	2 cut(s)	798, 1362
Cac8I	GCNNGC	3 cut(s)	241, 778, 1059
CciI	TCATGA	1 cut(s)	1120
CfoI	GCGC	3 cut(s)	55, 778, 780
Cfr10I	RCCGGY	1 cut(s)	1057
Cfr13I	GGNCC	2 cut(s)	146, 696
CspCI	CAANNNNNGTGG	2 cut(s)	317, 352
CviAII	CATG	8 cut(s)	814, 916, 940, 1104, 1121, 1223, 1249, 1392
DdeI	CTNAG	5 cut(s)	119, 366, 921, 999, 1503
DpnI	GATC	7 cut(s)	434, 593, 708, 818, 1067, 1508, 1515
DpnII	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
DraIII	CACNNNGTG	1 cut(s)	569
DrdI	GACNNNNNNGTC	3 cut(s)	367, 916, 1003
DseDI	GACNNNNNNGTC	3 cut(s)	367, 916, 1003
EaeI	YGGCCR	1 cut(s)	870
Eam1104I	CTCTTC	4 cut(s)	10, 188, 741, 830
EarI	CTCTTC	4 cut(s)	10, 188, 741, 830
EciI	GGCGGA	2 cut(s)	443, 498
Eco130I	CCWWGG	4 cut(s)	309, 740, 873, 939
Eco47I	GGWCC	2 cut(s)	146, 696
Eco47III	AGCGCT	1 cut(s)	54
Eco57I	CTGAAG	1 cut(s)	1338
Eco91I	GGTNACC	1 cut(s)	1426
EcoO109I	RGGNCCY	1 cut(s)	696
EcoO65I	GGTNACC	1 cut(s)	1426
EcoT14I	CCWWGG	4 cut(s)	309, 740, 873, 939
EcoT22I	ATGCAT	1 cut(s)	1224
ErhI	CCWWGG	4 cut(s)	309, 740, 873, 939
Esp3I	CGTCTC	1 cut(s)	822
FaeI	CATG	8 cut(s)	817, 919, 943, 1107, 1124, 1226, 1252, 1395
FaqI	GGGAC	1 cut(s)	709
FatI	CATG	8 cut(s)	813, 915, 939, 1103, 1120, 1222, 1248, 1391
FauI	CCCGC	1 cut(s)	773
FbaI	TGATCA	1 cut(s)	816
FblI	GTMKAC	2 cut(s)	71, 215
Fnu4HI	GCNGC	5 cut(s)	51, 228, 441, 774, 1101
Fsp4HI	GCNGC	5 cut(s)	51, 228, 441, 774, 1101
FspBI	CTAG	6 cut(s)	41, 104, 1053, 1097, 1437, 1464
GlaI	GCGC	3 cut(s)	54, 777, 779
GluI	GCNGC	5 cut(s)	51, 228, 441, 774, 1101
HaeII	RGCGCY	1 cut(s)	56
HaeIII	GGCC	3 cut(s)	308, 872, 1057
HapII	CCGG	8 cut(s)	8, 144, 167, 252, 292, 971, 1058, 1329
HhaI	GCGC	3 cut(s)	55, 778, 780
Hin1II	CATG	8 cut(s)	817, 919, 943, 1107, 1124, 1226, 1252, 1395
Hin6I	GCGC	3 cut(s)	53, 776, 778
HinP1I	GCGC	3 cut(s)	53, 776, 778
HincII	GTYRAC	3 cut(s)	31, 989, 996
HindII	GTYRAC	3 cut(s)	31, 989, 996
HinfI	GANTC	9 cut(s)	65, 125, 130, 136, 461, 521, 557, 1400, 1469
HpaI	GTTAAC	1 cut(s)	31
HpaII	CCGG	8 cut(s)	8, 144, 167, 252, 292, 971, 1058, 1329
HphI	GGTGA	6 cut(s)	181, 530, 723, 815, 1352, 1438
Hpy166II	GTNNAC	9 cut(s)	31, 72, 216, 372, 499, 989, 996, 1015, 1238
Hpy188I	TCNGA	9 cut(s)	135, 278, 403, 437, 724, 1009, 1025, 1312, 1504
Hpy188III	TCNNGA	4 cut(s)	94, 583, 965, 1121
Hpy8I	GTNNAC	9 cut(s)	31, 72, 216, 372, 499, 989, 996, 1015, 1238
Hpy99I	CGWCG	1 cut(s)	987
HpyAV	CCTTC	3 cut(s)	541, 803, 1330
HpyCH4III	ACNGT	6 cut(s)	386, 518, 647, 993, 1245, 1495
HpyCH4IV	ACGT	5 cut(s)	377, 468, 495, 618, 831
HpyCH4V	TGCA	8 cut(s)	239, 787, 813, 1103, 1208, 1222, 1280, 1376
HpyF10VI	GCNNNNNNNGC	5 cut(s)	236, 403, 784, 878, 1058
HpyF3I	CTNAG	5 cut(s)	119, 366, 921, 999, 1503
HpySE526I	ACGT	5 cut(s)	377, 468, 495, 618, 831
Hsp92II	CATG	8 cut(s)	817, 919, 943, 1107, 1124, 1226, 1252, 1395
HspAI	GCGC	3 cut(s)	53, 776, 778
KflI	GGGWCCC	1 cut(s)	696
KpnI	GGTACC	2 cut(s)	188, 510
KroI	GCCGGC	1 cut(s)	1057
KroNI	GCCGGC	1 cut(s)	1059
Ksp22I	TGATCA	1 cut(s)	816
KspAI	GTTAAC	1 cut(s)	31
Kzo9I	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
LguI	GCTCTTC	2 cut(s)	188, 830
Lsp1109I	GCAGC	3 cut(s)	62, 239, 1087
LweI	GCATC	2 cut(s)	76, 1363
MaeI	CTAG	6 cut(s)	41, 104, 1053, 1097, 1437, 1464
MaeII	ACGT	5 cut(s)	377, 468, 495, 618, 831
MaeIII	GTNAC	7 cut(s)	255, 491, 561, 614, 647, 1426, 1445
MalI	GATC	7 cut(s)	434, 593, 708, 818, 1067, 1508, 1515
MboI	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
MflI	RGATCY	1 cut(s)	1506
MhlI	GDGCHC	5 cut(s)	200, 574, 842, 908, 1270
MlsI	TGGCCA	1 cut(s)	872
MluCI	AATT	6 cut(s)	596, 727, 1156, 1203, 1209, 1453
MluNI	TGGCCA	1 cut(s)	872
MlyI	GAGTC	5 cut(s)	119, 124, 530, 566, 1394
MmeI	TCCRAC	1 cut(s)	834
Mox20I	TGGCCA	1 cut(s)	872
Mph1103I	ATGCAT	1 cut(s)	1224
MroNI	GCCGGC	1 cut(s)	1057
MscI	TGGCCA	1 cut(s)	872
MseI	TTAA	4 cut(s)	30, 1110, 1283, 1476
MslI	CAYNNNNRTG	2 cut(s)	801, 1227
Msp20I	TGGCCA	1 cut(s)	872
MspA1I	CMGCKG	1 cut(s)	1076
MspI	CCGG	8 cut(s)	8, 144, 167, 252, 292, 971, 1058, 1329
MspR9I	CCNGG	3 cut(s)	253, 971, 1330
MvnI	CGCG	3 cut(s)	705, 778, 780
MwoI	GCNNNNNNNGC	5 cut(s)	236, 403, 784, 878, 1058
NaeI	GCCGGC	1 cut(s)	1059
NciI	CCSGG	3 cut(s)	253, 971, 1330
NcoI	CCATGG	1 cut(s)	939
NdeII	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
NgoMIV	GCCGGC	1 cut(s)	1057
NlaIII	CATG	8 cut(s)	817, 919, 943, 1107, 1124, 1226, 1252, 1395
NlaIV	GGNNCC	7 cut(s)	148, 186, 508, 571, 697, 698, 1411
NmuCI	GTSAC	4 cut(s)	561, 614, 647, 1426
NsiI	ATGCAT	1 cut(s)	1224
NspV	TTCGAA	1 cut(s)	464
OliI	CACNNNNGTG	1 cut(s)	801
PagI	TCATGA	1 cut(s)	1120
PauI	GCGCGC	1 cut(s)	776
PciSI	GCTCTTC	2 cut(s)	188, 830
PcsI	WCGNNNNNNNCGW	3 cut(s)	624, 657, 963
PdiI	GCCGGC	1 cut(s)	1059
PfeI	GAWTC	4 cut(s)	65, 136, 461, 1469
PkrI	GCNGC	5 cut(s)	52, 229, 442, 775, 1102
PleI	GAGTC	5 cut(s)	119, 124, 529, 565, 1394
PpsI	GAGTC	5 cut(s)	119, 124, 529, 565, 1394
PpuMI	RGGWCCY	1 cut(s)	696
Psp1406I	AACGTT	1 cut(s)	468
Psp5II	RGGWCCY	1 cut(s)	696
PspEI	GGTNACC	1 cut(s)	1426
PspN4I	GGNNCC	7 cut(s)	148, 186, 508, 571, 697, 698, 1411
PspPI	GGNCC	2 cut(s)	146, 696
PspPPI	RGGWCCY	1 cut(s)	696
PsuI	RGATCY	1 cut(s)	1506
PteI	GCGCGC	1 cut(s)	776
RseI	CAYNNNNRTG	2 cut(s)	801, 1227
SapI	GCTCTTC	2 cut(s)	188, 830
SaqAI	TTAA	4 cut(s)	30, 1110, 1283, 1476
SatI	GCNGC	5 cut(s)	51, 228, 441, 774, 1101
Sau3AI	GATC	7 cut(s)	432, 591, 706, 816, 1065, 1506, 1513
Sau96I	GGNCC	2 cut(s)	146, 696
ScaI	AGTACT	2 cut(s)	45, 977
SchI	GAGTC	5 cut(s)	119, 124, 530, 566, 1394
ScrFI	CCNGG	3 cut(s)	253, 971, 1330
SduI	GDGCHC	5 cut(s)	200, 574, 842, 908, 1270
SfaNI	GCATC	2 cut(s)	76, 1363
SfcI	CTRYAG	1 cut(s)	56
SfuI	TTCGAA	1 cut(s)	464
SinI	GGWCC	2 cut(s)	146, 696
SmiMI	CAYNNNNRTG	2 cut(s)	801, 1227
SmlI	CTYRAG	2 cut(s)	322, 575
SmoI	CTYRAG	2 cut(s)	322, 575
SpeI	ACTAGT	1 cut(s)	1436
Sse9I	AATT	6 cut(s)	596, 727, 1156, 1203, 1209, 1453
SsiI	CCGC	8 cut(s)	428, 441, 483, 554, 773, 780, 1076, 1299
SspMI	CTAG	6 cut(s)	41, 104, 1053, 1097, 1437, 1464
StyD4I	CCNGG	3 cut(s)	251, 969, 1328
StyI	CCWWGG	4 cut(s)	309, 740, 873, 939
TaaI	ACNGT	6 cut(s)	386, 518, 647, 993, 1245, 1495
TaiI	ACGT	5 cut(s)	380, 471, 498, 621, 834
TaqI	TCGA	5 cut(s)	128, 464, 594, 896, 966
TasI	AATT	6 cut(s)	596, 727, 1156, 1203, 1209, 1453
TatI	WGTACW	5 cut(s)	43, 498, 714, 975, 1014
TauI	GCSGC	2 cut(s)	443, 776
TfiI	GAWTC	4 cut(s)	65, 136, 461, 1469
Tru1I	TTAA	4 cut(s)	30, 1110, 1283, 1476
Tru9I	TTAA	4 cut(s)	30, 1110, 1283, 1476
TscAI	CASTG	2 cut(s)	805, 1362
TseFI	GTSAC	4 cut(s)	561, 614, 647, 1426
TseI	GCWGC	3 cut(s)	50, 227, 1100
Tsp45I	GTSAC	4 cut(s)	561, 614, 647, 1426
TspDTI	ATGAA	5 cut(s)	378, 411, 1106, 1137, 1265
TspGWI	ACGGA	4 cut(s)	602, 602, 1058, 1143
TspRI	CASTG	2 cut(s)	805, 1362
VpaK11BI	GGWCC	2 cut(s)	146, 696
XapI	RAATTY	2 cut(s)	727, 1453
XmiI	GTMKAC	2 cut(s)	71, 215
XspI	CTAG	6 cut(s)	41, 104, 1053, 1097, 1437, 1464
ZrmI	AGTACT	2 cut(s)	45, 977
Zsp2I	ATGCAT	1 cut(s)	1224

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.