Rh2AG649100

Pentatricopeptide repeat-containing protein At4g35850

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0003017
Physical Location & Seq
Forward (+)
86844800 .. 86850298
5499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG649100.1

Sequence Viewer

Length: 1506 bp
ATGACACTCCTCCGATCAATTTCCGGTGCTTCTCACCGGTCACTATTTCTTCGTGCCATCGGCCGGCGACACCTGGCTTCAACTCCGGCTCCGGCTCCGGCTCAGACGGAGGAATACAAGAGGAGAAACTACGCCAACAATGTCACGGAGTACAACGGCGTCGTTAACTCCATCACTGCGCAGAGAAGGTTCTCTTTTCTTCTGAGAGACGTCTACGACGACATGTCGCTCGACGGAGTCCAGCCGGACCGAGACACCTTCCACTCGCTCATTTTGGGGTCCATGAAGGGGGCTCGCTTGCAGGACGCGTTCTACTTCACTGAGCAGATGAAATCCATGGGCTTGGTTCCTGATGTCAATTCGTACAACATGTTGATTTCGGTGTGTGGGAAGTGCAAGAACTCGGAGCAGGCGATTCAGATTTTGGAAGAAATGAAGAAGTATAAGGTAAAGCCGATGGTGCAAACCTACATGTGTCTCCTCAATGCATGTGCAGCTGCTGGCCGTCTAGATCAAGTGTATGCAATTGTCCGCGACATGACTGCTGCTGGTCTTGGGTTAAACAAGTTTTGCTATGCGGGACTTATAACTGCACTGAGGAACAAGACACCCTTACCAGATGATTATGCTGCCAAAATTATAGAGTTTGTGGAGCGGTCAAAAGAGTGGTCATCGGTGGAAGCTTCAAGTGAAACAGCTCAAAATGTAATGACGGGGGTAACAGAAGAGGAGCTGTATAACATGCCAACAGCTGAGTATATTAATAGGCGTGGATTTTTGAATAGGCCACTAACTGTGTATCATGTTGCATTTCATGCATGTGCGGACCTTGGAAATGTTGAGGTGATGGAAGCTCTTTTGGACATGCTAAAAAAGGATGGGAAATTTCCTGATACCTATATTGTGATTCAAACTATGAGATGCTATTTGAACTGTGGGGATATTGATCGTGGTTGGCAAATGCTTGATGAATATCTGAAGTCAGGAAGGCCTCCTGTACCAGAACTCTATACAACACTTGCAGAGGGCGCCATGATTGGATATACTCCTAAGGGAATGCAAATTGCCCAAAAGGCATTGGAAGATATGAATTCCAGGAACTTTTACTTGCTTCCAAGACAAGGGACTGATCTTCTCCTTGTAGCTGCCGGTGAAAAGACCGGAGGTTATACTACTGCAAACTATATATGGGACTTGATGCAAGCTCGTAAAGTAACTCCTCAACTTCCTGCAGTAGAAGCATATTACAATGGCTTGAAAGAACGCGAGATTCCTGCTGATGATCCACGACTAGTACTGGTTAAGCTTGTGCGAGGCCCACTAAGAAGCCCAAGAGACGAATACCCGCTTCCTTCTTCTTCTTCTAGCCAATCTTTCATTCGCTCGCTGCAAAACCCTACTGAACTAGTGATATTGGAGTGTAGCTGTTTAGCTTTGAGCTGCTTAGAGATCACCATTGCTTTGGATTCAGTGGCTGCGGCGCACAGTGTTCGAGGATTTGCATAG

Protein Analysis

501

Amino Acids

56.01

Weight (kDa)

6.63

Isoelectric Point (pI)

50.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 70 - 181 1.3e-11 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 71 - 131 4e-09 Pentatricopeptide repeat domain
PPR_3 PF13812 109 - 164 1.8e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 113 - 146 9e-06 PPR repeat
PPR_2 PF13041 117 - 165 2.6e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
AatII GACGTC 1 cut(s) 213
Acc16I TGCGCA 1 cut(s) 180
AccB1I GGYRCC 1 cut(s) 1028
AccBSI CCGCTC 1 cut(s) 655
AccI GTMKAC 1 cut(s) 213
AccII CGCG 3 cut(s) 308, 534, 1266
AciI CCGC 6 cut(s) 532, 578, 655, 824, 1346, 1478
AclWI GGATC 1 cut(s) 1277
AcoI YGGCCR 2 cut(s) 61, 502
AcsI RAATTY 2 cut(s) 884, 1090
AcuI CTGAAG 1 cut(s) 998
AcyI GRCGYC 3 cut(s) 159, 210, 1029
AfaI GTAC 4 cut(s) 152, 365, 999, 1296
AfiI CCNNNNNNNGG 3 cut(s) 63, 288, 1121
AflIII ACRYGT 4 cut(s) 222, 306, 369, 471
AgeI ACCGGT 1 cut(s) 36
AgsI TTSAA 6 cut(s) 81, 687, 781, 911, 931, 1258
AhdI GACNNNNNGTC 1 cut(s) 223
AhlI ACTAGT 2 cut(s) 1291, 1405
AjnI CCWGG 2 cut(s) 72, 1094
AjuI GAANNNNNNNTTGG 2 cut(s) 1362, 1394
Alw26I GTCTC 4 cut(s) 201, 246, 482, 1329
AlwI GGATC 1 cut(s) 1277
AlwNI CAGNNNCTG 2 cut(s) 500, 1475
AoxI GGCC 5 cut(s) 61, 502, 785, 989, 1315
ApeKI GCWGC 8 cut(s) 494, 497, 545, 629, 1145, 1387, 1440, 1475
ApoI RAATTY 2 cut(s) 884, 1090
ArsI GACNNNNNNTTYG 2 cut(s) 653, 685
AseI ATTAAT 1 cut(s) 762
AsiGI ACCGGT 1 cut(s) 36
AspLEI GCGC 3 cut(s) 181, 1031, 1483
AspS9I GGNCC 4 cut(s) 247, 279, 826, 1316
AsuHPI GGTGA 4 cut(s) 26, 856, 1163, 1444
AvaII GGWCC 3 cut(s) 247, 279, 826
AxyI CCTNAGG 1 cut(s) 1050
BanI GGYRCC 1 cut(s) 1028
BanII GRGCYC 1 cut(s) 295
BbvI GCAGC 8 cut(s) 484, 506, 532, 616, 1132, 1374, 1427, 1462
BccI CCATC 5 cut(s) 65, 179, 451, 841, 872
BceAI ACGGC 2 cut(s) 172, 489
BcgI CGANNNNNNTGC 6 cut(s) 524, 558, 1256, 1290, 1472, 1506
BciT130I CCWGG 2 cut(s) 74, 1096
BcoDI GTCTC 4 cut(s) 201, 246, 482, 1329
BcuI ACTAGT 2 cut(s) 1291, 1405
BfaI CTAG 4 cut(s) 509, 1292, 1365, 1406
BfmI CTRYAG 1 cut(s) 1230
BfoI RGCGCY 1 cut(s) 1032
BglI GCCNNNNNGGC 1 cut(s) 1073
BisI GCNGC 9 cut(s) 495, 498, 546, 630, 1146, 1388, 1441, 1476, 1479
BlsI GCNGC 9 cut(s) 496, 499, 547, 631, 1147, 1389, 1442, 1477, 1480
BmcAI AGTACT 1 cut(s) 1296
Bme1390I CCNGG 2 cut(s) 74, 1096
Bme18I GGWCC 3 cut(s) 247, 279, 826
BmeRI GACNNNNNGTC 1 cut(s) 223
BmgT120I GGNCC 4 cut(s) 247, 279, 826, 1316
BmiI GGNNCC 5 cut(s) 90, 96, 280, 348, 1030
BmrFI CCNGG 2 cut(s) 74, 1096
BmsI GCATC 2 cut(s) 911, 1188
BsaBI GATNNNNATC 2 cut(s) 945, 972
BsaHI GRCGYC 3 cut(s) 159, 210, 1029
BsaJI CCNNGG 2 cut(s) 336, 829
BsaWI WCCGGW 3 cut(s) 23, 36, 1160
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 3 cut(s) 63, 288, 1121
Bse118I RCCGGY 3 cut(s) 36, 63, 1148
Bse1I ACTGG 1 cut(s) 1302
Bse21I CCTNAGG 1 cut(s) 1050
Bse3DI GCAATG 1 cut(s) 1455
Bse8I GATNNNNATC 2 cut(s) 945, 972
BseBI CCWGG 2 cut(s) 74, 1096
BseDI CCNNGG 2 cut(s) 336, 829
BseGI GGATG 1 cut(s) 883
BseJI GATNNNNATC 2 cut(s) 945, 972
BseLI CCNNNNNNNGG 3 cut(s) 63, 288, 1121
BseMI GCAATG 1 cut(s) 1455
BseMII CTCAG 5 cut(s) 116, 194, 312, 587, 744
BseNI ACTGG 1 cut(s) 1302
BseRI GAGGAG 4 cut(s) 136, 470, 743, 1209
BseX3I CGGCCG 1 cut(s) 61
BseXI GCAGC 8 cut(s) 484, 506, 532, 616, 1132, 1374, 1427, 1462
BsgI GTGCAG 2 cut(s) 513, 576
Bsh1236I CGCG 3 cut(s) 308, 534, 1266
Bsh1285I CGRYCG 1 cut(s) 64
BshFI GGCC 5 cut(s) 63, 504, 787, 991, 1317
BshNI GGYRCC 1 cut(s) 1028
BshTI ACCGGT 1 cut(s) 36
BsiEI CGRYCG 1 cut(s) 64
BsiSI CCGG 9 cut(s) 24, 37, 64, 86, 92, 98, 245, 1149, 1161
BslFI GGGAC 3 cut(s) 594, 1138, 1205
BslI CCNNNNNNNGG 3 cut(s) 63, 288, 1121
BsmAI GTCTC 4 cut(s) 201, 246, 482, 1329
BsmBI CGTCTC 2 cut(s) 201, 1329
BsmFI GGGAC 3 cut(s) 594, 1138, 1205
BsmI GAATGC 1 cut(s) 1062
BsnI GGCC 5 cut(s) 63, 504, 787, 991, 1317
Bsp1286I GDGCHC 1 cut(s) 295
Bsp143I GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 6 cut(s) 532, 578, 655, 824, 1346, 1478
BspANI GGCC 5 cut(s) 63, 504, 787, 991, 1317
BspCNI CTCAG 5 cut(s) 115, 195, 313, 588, 745
BspFNI CGCG 3 cut(s) 308, 534, 1266
BspLI GGNNCC 5 cut(s) 90, 96, 280, 348, 1030
BspMAI CTGCAG 1 cut(s) 1234
BspPI GGATC 1 cut(s) 1277
BspT107I GGYRCC 1 cut(s) 1028
BsrBI CCGCTC 1 cut(s) 655
BsrDI GCAATG 1 cut(s) 1455
BsrFI RCCGGY 3 cut(s) 36, 63, 1148
BsrI ACTGG 1 cut(s) 1302
BssAI RCCGGY 3 cut(s) 36, 63, 1148
BssECI CCNNGG 2 cut(s) 336, 829
BssMI GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
BssNI GRCGYC 3 cut(s) 159, 210, 1029
BssT1I CCWWGG 2 cut(s) 336, 829
Bst2UI CCWGG 2 cut(s) 74, 1096
Bst4CI ACNGT 3 cut(s) 796, 935, 1487
Bst6I CTCTTC 1 cut(s) 720
BstACI GRCGYC 3 cut(s) 159, 210, 1029
BstAPI GCANNNNNTGC 1 cut(s) 815
BstC8I GCNNGC 7 cut(s) 65, 295, 299, 411, 502, 1203, 1385
BstDEI CTNAG 8 cut(s) 102, 203, 321, 596, 753, 1050, 1322, 1444
BstDSI CCRYGG 1 cut(s) 336
BstF5I GGATG 1 cut(s) 883
BstFNI CGCG 3 cut(s) 308, 534, 1266
BstH2I RGCGCY 1 cut(s) 1032
BstHHI GCGC 3 cut(s) 181, 1031, 1483
BstKTI GATC 6 cut(s) 17, 514, 949, 1132, 1285, 1452
BstMAI GTCTC 4 cut(s) 201, 246, 482, 1329
BstMBI GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
BstMCI CGRYCG 1 cut(s) 64
BstMWI GCNNNNNNNGC 6 cut(s) 460, 494, 815, 1028, 1073, 1238
BstNI CCWGG 2 cut(s) 74, 1096
BstNSI RCATGY 7 cut(s) 226, 373, 475, 492, 745, 822, 868
BstSCI CCNGG 2 cut(s) 72, 1094
BstSFI CTRYAG 1 cut(s) 1230
BstUI CGCG 3 cut(s) 308, 534, 1266
BstV1I GCAGC 8 cut(s) 484, 506, 532, 616, 1132, 1374, 1427, 1462
BstXI CCANNNNNNTGG 2 cut(s) 343, 1462
BstZI CGGCCG 1 cut(s) 61
Bsu36I CCTNAGG 1 cut(s) 1050
BsuRI GGCC 5 cut(s) 63, 504, 787, 991, 1317
BtgI CCRYGG 1 cut(s) 336
BtsCI GGATG 1 cut(s) 883
BtsI GCAGTG 1 cut(s) 174
BtsIMutI CAGTG 5 cut(s) 174, 318, 593, 1476, 1492
Cac8I GCNNGC 7 cut(s) 65, 295, 299, 411, 502, 1203, 1385
CaiI CAGNNNCTG 2 cut(s) 500, 1475
CfoI GCGC 3 cut(s) 181, 1031, 1483
Cfr10I RCCGGY 3 cut(s) 36, 63, 1148
Cfr13I GGNCC 4 cut(s) 247, 279, 826, 1316
CpoI CGGWCCG 1 cut(s) 247
CseI GACGC 2 cut(s) 148, 314
Csp6I GTAC 4 cut(s) 151, 364, 998, 1295
CspAI ACCGGT 1 cut(s) 36
CspI CGGWCCG 1 cut(s) 247
CviQI GTAC 4 cut(s) 151, 364, 998, 1295
DdeI CTNAG 8 cut(s) 102, 203, 321, 596, 753, 1050, 1322, 1444
DinI GGCGCC 1 cut(s) 1030
DpnI GATC 6 cut(s) 16, 513, 948, 1131, 1284, 1451
DpnII GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
DriI GACNNNNNGTC 1 cut(s) 223
EaeI YGGCCR 2 cut(s) 61, 502
EagI CGGCCG 1 cut(s) 61
Eam1104I CTCTTC 1 cut(s) 720
Eam1105I GACNNNNNGTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 720
EclXI CGGCCG 1 cut(s) 61
Eco130I CCWWGG 2 cut(s) 336, 829
Eco147I AGGCCT 1 cut(s) 991
Eco24I GRGCYC 1 cut(s) 295
Eco47I GGWCC 3 cut(s) 247, 279, 826
Eco52I CGGCCG 1 cut(s) 61
Eco57I CTGAAG 1 cut(s) 998
Eco81I CCTNAGG 1 cut(s) 1050
EcoRI GAATTC 1 cut(s) 1090
EcoRII CCWGG 2 cut(s) 72, 1094
EcoT14I CCWWGG 2 cut(s) 336, 829
EcoT22I ATGCAT 2 cut(s) 490, 820
EcoT38I GRGCYC 1 cut(s) 295
EgeI GGCGCC 1 cut(s) 1030
EheI GGCGCC 1 cut(s) 1030
ErhI CCWWGG 2 cut(s) 336, 829
Esp3I CGTCTC 2 cut(s) 201, 1329
FalI AAGNNNNNCTT 4 cut(s) 178, 210, 596, 628
FaqI GGGAC 3 cut(s) 594, 1138, 1205
FauI CCCGC 2 cut(s) 571, 1353
FblI GTMKAC 1 cut(s) 213
Fnu4HI GCNGC 9 cut(s) 495, 498, 546, 630, 1146, 1388, 1441, 1476, 1479
FokI GGATG 1 cut(s) 890
FriOI GRGCYC 1 cut(s) 295
Fsp4HI GCNGC 9 cut(s) 495, 498, 546, 630, 1146, 1388, 1441, 1476, 1479
FspBI CTAG 4 cut(s) 509, 1292, 1365, 1406
FspI TGCGCA 1 cut(s) 180
GlaI GCGC 3 cut(s) 180, 1030, 1482
GluI GCNGC 9 cut(s) 495, 498, 546, 630, 1146, 1388, 1441, 1476, 1479
HaeII RGCGCY 1 cut(s) 1032
HaeIII GGCC 5 cut(s) 63, 504, 787, 991, 1317
HapII CCGG 9 cut(s) 24, 37, 64, 86, 92, 98, 245, 1149, 1161
HgaI GACGC 2 cut(s) 148, 314
HhaI GCGC 3 cut(s) 181, 1031, 1483
Hin1I GRCGYC 3 cut(s) 159, 210, 1029
Hin6I GCGC 3 cut(s) 179, 1029, 1481
HinP1I GCGC 3 cut(s) 179, 1029, 1481
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HindIII AAGCTT 2 cut(s) 681, 1304
HinfI GANTC 5 cut(s) 237, 415, 907, 1270, 1466
HpaI GTTAAC 1 cut(s) 166
HpaII CCGG 9 cut(s) 24, 37, 64, 86, 92, 98, 245, 1149, 1161
HphI GGTGA 4 cut(s) 26, 856, 1163, 1444
Hpy166II GTNNAC 2 cut(s) 166, 214
Hpy188I TCNGA 6 cut(s) 14, 105, 204, 406, 420, 978
Hpy188III TCNNGA 4 cut(s) 350, 509, 890, 984
Hpy8I GTNNAC 2 cut(s) 166, 214
Hpy99I CGWCG 3 cut(s) 164, 221, 236
HpyAV CCTTC 5 cut(s) 180, 268, 280, 981, 1362
HpyCH4III ACNGT 3 cut(s) 796, 935, 1487
HpyCH4IV ACGT 1 cut(s) 210
HpyF10VI GCNNNNNNNGC 6 cut(s) 460, 494, 815, 1028, 1073, 1238
HpyF3I CTNAG 8 cut(s) 102, 203, 321, 596, 753, 1050, 1322, 1444
HpySE526I ACGT 1 cut(s) 210
Hsp92I GRCGYC 3 cut(s) 159, 210, 1029
HspAI GCGC 3 cut(s) 179, 1029, 1481
KasI GGCGCC 1 cut(s) 1028
KroI GCCGGC 1 cut(s) 63
KroNI GCCGGC 1 cut(s) 65
KspAI GTTAAC 1 cut(s) 166
Kzo9I GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
LmnI GCTCC 5 cut(s) 94, 100, 406, 652, 730
Lsp1109I GCAGC 8 cut(s) 484, 506, 532, 616, 1132, 1374, 1427, 1462
LweI GCATC 2 cut(s) 911, 1188
MaeI CTAG 4 cut(s) 509, 1292, 1365, 1406
MaeII ACGT 1 cut(s) 210
MaeIII GTNAC 4 cut(s) 39, 142, 718, 1213
MalI GATC 6 cut(s) 16, 513, 948, 1131, 1284, 1451
MbiI CCGCTC 1 cut(s) 655
MboI GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
MfeI CAATTG 1 cut(s) 525
MhlI GDGCHC 1 cut(s) 295
MluCI AATT 7 cut(s) 18, 358, 525, 636, 884, 1062, 1090
MluI ACGCGT 1 cut(s) 306
Mly113I GGCGCC 1 cut(s) 1029
MlyI GAGTC 1 cut(s) 246
Mph1103I ATGCAT 2 cut(s) 490, 820
MroNI GCCGGC 1 cut(s) 63
MseI TTAA 4 cut(s) 165, 560, 762, 1302
MslI CAYNNNNRTG 1 cut(s) 819
MspA1I CMGCKG 2 cut(s) 497, 752
MspI CCGG 9 cut(s) 24, 37, 64, 86, 92, 98, 245, 1149, 1161
MspR9I CCNGG 2 cut(s) 74, 1096
MunI CAATTG 1 cut(s) 525
Mva1269I GAATGC 1 cut(s) 1062
MvaI CCWGG 2 cut(s) 74, 1096
MvnI CGCG 3 cut(s) 308, 534, 1266
MwoI GCNNNNNNNGC 6 cut(s) 460, 494, 815, 1028, 1073, 1238
NaeI GCCGGC 1 cut(s) 65
NarI GGCGCC 1 cut(s) 1029
NcoI CCATGG 1 cut(s) 336
NdeII GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
NgoMIV GCCGGC 1 cut(s) 63
NlaIV GGNNCC 5 cut(s) 90, 96, 280, 348, 1030
NmuCI GTSAC 2 cut(s) 39, 142
NsbI TGCGCA 1 cut(s) 180
NsiI ATGCAT 2 cut(s) 490, 820
NspI RCATGY 7 cut(s) 226, 373, 475, 492, 745, 822, 868
PceI AGGCCT 1 cut(s) 991
PciI ACATGT 3 cut(s) 222, 369, 471
PcsI WCGNNNNNNNCGW 2 cut(s) 216, 410
PctI GAATGC 1 cut(s) 1062
PdiI GCCGGC 1 cut(s) 65
PfeI GAWTC 4 cut(s) 415, 907, 1270, 1466
PflFI GACNNNGTC 1 cut(s) 236
PfoI TCCNGGA 1 cut(s) 1094
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 9 cut(s) 496, 499, 547, 631, 1147, 1389, 1442, 1477, 1480
PleI GAGTC 1 cut(s) 245
PluTI GGCGCC 1 cut(s) 1032
PpsI GAGTC 1 cut(s) 245
PscI ACATGT 3 cut(s) 222, 369, 471
PshBI ATTAAT 1 cut(s) 762
PsiI TTATAA 1 cut(s) 587
Psp6I CCWGG 2 cut(s) 72, 1094
PspGI CCWGG 2 cut(s) 72, 1094
PspN4I GGNNCC 5 cut(s) 90, 96, 280, 348, 1030
PspPI GGNCC 4 cut(s) 247, 279, 826, 1316
PstI CTGCAG 1 cut(s) 1234
PstNI CAGNNNCTG 2 cut(s) 500, 1475
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 2 cut(s) 497, 752
RsaI GTAC 4 cut(s) 152, 365, 999, 1296
RsaNI GTAC 4 cut(s) 151, 364, 998, 1295
RseI CAYNNNNRTG 1 cut(s) 819
Rsr2I CGGWCCG 1 cut(s) 247
RsrII CGGWCCG 1 cut(s) 247
SaqAI TTAA 4 cut(s) 165, 560, 762, 1302
SatI GCNGC 9 cut(s) 495, 498, 546, 630, 1146, 1388, 1441, 1476, 1479
Sau3AI GATC 6 cut(s) 14, 511, 946, 1129, 1282, 1449
Sau96I GGNCC 4 cut(s) 247, 279, 826, 1316
ScaI AGTACT 1 cut(s) 1296
SchI GAGTC 1 cut(s) 246
ScrFI CCNGG 2 cut(s) 74, 1096
SduI GDGCHC 1 cut(s) 295
SfaNI GCATC 2 cut(s) 911, 1188
SfcI CTRYAG 1 cut(s) 1230
SfoI GGCGCC 1 cut(s) 1030
SinI GGWCC 3 cut(s) 247, 279, 826
SmiMI CAYNNNNRTG 1 cut(s) 819
SpeI ACTAGT 2 cut(s) 1291, 1405
Sse9I AATT 7 cut(s) 18, 358, 525, 636, 884, 1062, 1090
SseBI AGGCCT 1 cut(s) 991
SsiI CCGC 6 cut(s) 532, 578, 655, 824, 1346, 1478
SspDI GGCGCC 1 cut(s) 1028
SspMI CTAG 4 cut(s) 509, 1292, 1365, 1406
StuI AGGCCT 1 cut(s) 991
StyD4I CCNGG 2 cut(s) 72, 1094
StyI CCWWGG 2 cut(s) 336, 829
TaaI ACNGT 3 cut(s) 796, 935, 1487
TaiI ACGT 1 cut(s) 213
TaqI TCGA 2 cut(s) 231, 1492
TaqII GACCGA 1 cut(s) 264
TasI AATT 7 cut(s) 18, 358, 525, 636, 884, 1062, 1090
TatI WGTACW 2 cut(s) 150, 1294
TauI GCSGC 1 cut(s) 1481
TfiI GAWTC 4 cut(s) 415, 907, 1270, 1466
Tru1I TTAA 4 cut(s) 165, 560, 762, 1302
Tru9I TTAA 4 cut(s) 165, 560, 762, 1302
TscAI CASTG 5 cut(s) 181, 325, 600, 1476, 1492
TseFI GTSAC 2 cut(s) 39, 142
TseI GCWGC 8 cut(s) 494, 497, 545, 629, 1145, 1387, 1440, 1475
Tsp45I GTSAC 2 cut(s) 39, 142
TspDTI ATGAA 7 cut(s) 299, 344, 449, 803, 984, 1103, 1366
TspGWI ACGGA 3 cut(s) 122, 161, 249
TspRI CASTG 5 cut(s) 181, 325, 600, 1476, 1492
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 3 cut(s) 247, 279, 826
VspI ATTAAT 1 cut(s) 762
XapI RAATTY 2 cut(s) 884, 1090
XbaI TCTAGA 1 cut(s) 508
XceI RCATGY 7 cut(s) 226, 373, 475, 492, 745, 822, 868
XmiI GTMKAC 1 cut(s) 213
XspI CTAG 4 cut(s) 509, 1292, 1365, 1406
ZraI GACGTC 1 cut(s) 211
ZrmI AGTACT 1 cut(s) 1296
Zsp2I ATGCAT 2 cut(s) 490, 820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.