Pentatricopeptide repeat-containing protein At4g35850
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G35850 |
| fragaria_vesca | FvH4_6g51990 |
| malus_domestica | MD09G1021100.v1.1 MD09G1021300.v1.1 MD17G1021300.v1.1 |
| prunus_persica | Prupe.3G295200_v2.0.a1 Prupe.3G295200_v2.0.a1 |
| pyrus_communis | pycom111g01770 pycom17g01800 |
| rosa_chinensis | RchiOBHm_Chr2g0173461 RchiOBHm_Chr6g0291191 |
| rosa_laevigata | RLG00000022192 |
| rosa_multiflora | Rmu_sc0000580.1_g000120 Rmu_sc0015463.1_g000007 Rmu_sc0028728.1_g000001 Rmu_ssc0000467.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00078830 Rroxscaffold_2G00079350 Rroxscaffold_2G00084510 |
| rosa_rugosa | Rorug02G0525500 Rorug02G0568900 Rorug02G0569200 Rorug02G0569500 Rorug02G0570700 |
| rosa_samantha | Rh2AG521200 Rh2AG649100 Rh2BG659700 Rh2CG574600 Rh2CG624900 Rh2DG674800 Rh3DG228100 Rh4CG014600 Rh4CG314700 Rh4DG296000 Rh6AG277500 Rh6AG329100 Rh7BG450100 |
| rosa_wichuraiana | Rw2G053290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 242 |
| AgsI | TTSAA | 3 cut(s) | 54, 155, 175 |
| AluBI | AGCT | 2 cut(s) | 235, 262 |
| AluI | AGCT | 2 cut(s) | 235, 262 |
| BccI | CCATC | 3 cut(s) | 88, 116, 167 |
| BglII | AGATCT | 1 cut(s) | 56 |
| BmsI | GCATC | 1 cut(s) | 155 |
| BsaBI | GATNNNNATC | 2 cut(s) | 189, 216 |
| Bse8I | GATNNNNATC | 2 cut(s) | 189, 216 |
| BseGI | GGATG | 1 cut(s) | 127 |
| BseJI | GATNNNNATC | 2 cut(s) | 189, 216 |
| BseMII | CTCAG | 1 cut(s) | 51 |
| BseRI | GAGGAG | 2 cut(s) | 6, 25 |
| BsgI | GTGCAG | 1 cut(s) | 225 |
| Bsp143I | GATC | 2 cut(s) | 56, 190 |
| BspCNI | CTCAG | 1 cut(s) | 50 |
| BssMI | GATC | 2 cut(s) | 56, 190 |
| Bst4CI | ACNGT | 1 cut(s) | 179 |
| BstDEI | CTNAG | 1 cut(s) | 37 |
| BstF5I | GGATG | 1 cut(s) | 127 |
| BstKTI | GATC | 2 cut(s) | 59, 193 |
| BstMBI | GATC | 2 cut(s) | 56, 190 |
| BstNSI | RCATGY | 1 cut(s) | 115 |
| BstX2I | RGATCY | 1 cut(s) | 56 |
| BstYI | RGATCY | 1 cut(s) | 56 |
| BtsCI | GGATG | 1 cut(s) | 127 |
| CviAII | CATG | 1 cut(s) | 112 |
| CviJI | RGCY | 2 cut(s) | 235, 262 |
| CviKI_1 | RGCY | 2 cut(s) | 235, 262 |
| DdeI | CTNAG | 1 cut(s) | 37 |
| DpnI | GATC | 2 cut(s) | 58, 192 |
| DpnII | GATC | 2 cut(s) | 56, 190 |
| Eco57I | CTGAAG | 1 cut(s) | 242 |
| FaeI | CATG | 1 cut(s) | 115 |
| FaiI | YATR | 4 cut(s) | 7, 113, 144, 254 |
| FatI | CATG | 1 cut(s) | 111 |
| FokI | GGATG | 1 cut(s) | 134 |
| Hin1II | CATG | 1 cut(s) | 115 |
| HindIII | AAGCTT | 2 cut(s) | 233, 260 |
| HinfI | GANTC | 2 cut(s) | 41, 50 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 164, 222 |
| Hpy188III | TCNNGA | 3 cut(s) | 54, 134, 194 |
| HpyCH4III | ACNGT | 1 cut(s) | 179 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 202, 242 |
| HpyF3I | CTNAG | 1 cut(s) | 37 |
| Hsp92II | CATG | 1 cut(s) | 115 |
| Kzo9I | GATC | 2 cut(s) | 56, 190 |
| LpnPI | CCDG | 3 cut(s) | 222, 252, 258 |
| LweI | GCATC | 1 cut(s) | 155 |
| MalI | GATC | 2 cut(s) | 58, 192 |
| MboI | GATC | 2 cut(s) | 56, 190 |
| MflI | RGATCY | 1 cut(s) | 56 |
| MluCI | AATT | 1 cut(s) | 150 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MnlI | CCTC | 4 cut(s) | 24, 27, 46, 276 |
| NdeII | GATC | 2 cut(s) | 56, 190 |
| NlaIII | CATG | 1 cut(s) | 115 |
| NspI | RCATGY | 1 cut(s) | 115 |
| PfeI | GAWTC | 1 cut(s) | 50 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| PsuI | RGATCY | 1 cut(s) | 56 |
| Sau3AI | GATC | 2 cut(s) | 56, 190 |
| SchI | GAGTC | 1 cut(s) | 35 |
| SetI | ASST | 3 cut(s) | 143, 237, 264 |
| SfaNI | GCATC | 1 cut(s) | 155 |
| SgeI | CNNG | 9 cut(s) | 40, 66, 101, 124, 146, 206, 221, 251, 257 |
| Sse9I | AATT | 1 cut(s) | 150 |
| TaaI | ACNGT | 1 cut(s) | 179 |
| TasI | AATT | 1 cut(s) | 150 |
| TfiI | GAWTC | 1 cut(s) | 50 |
| XceI | RCATGY | 1 cut(s) | 115 |