Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001741

Physical Location & Seq

Genomic Coordinates Reverse (-)

12565302 .. 12566372

Gene Structure 1071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1157600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGAGGCCGATGCAGCCGCCGCCCGGAACAAACCCAGCAGTGGTGGCCCCACCACCGAGGCGGGACAACCAGAGACGACGTCGTCACGACCTAACCCTACCGCTACCTCAGCGGGACACCTCGCTTGCAGTACCGCTTCCTCTCCCTCCGCCCGGTCCGAGCTCGGCCCAGTCGTCCTCGGCCCACAGCGCGGCCCAGCAGCTCATCAACTTCTCCGAGCTCGAGCGCTCCAACCGCATCGGGAGCGGAACGGGAGGCACTGTCTACAAGGCCATACACCGCCCGACGGGCCGGGTTTACGCGCTCAAGGTGATTTATGGCAACCACGATGACGCCGTGCGCAACCAGATCTGCCGCGAGATCGAAATACTCCGCGACGTCGACAACCCCAACGTCGTCAAGTGCCACGACATGTTCGACCACAACGGCGAGATCCAGGTTCTGCTCGAGTACATGGACGGCGGGTCGCTGGAGGGCCAGCACATCGGGAACGAGAAGGCCCTCTCCGATTTGGCCAGGCAAATCCTCAGCGGCCTCGCCTATCTCCACCGGCGGAAGATCGTCCACCGCGATATCAAACCCTCGAATCTTTTGATCAACGCGAGGAACCAGGTCAAGATCGCCGATTTCGGAGTGAGTCGGATTCTGGCTCAGACCATGGACCCCTGCAATTCTTCCGTCGGGACCATCGCATACATGAGTCCGGAGAGGATCAACACCGATCTCAATCACGGCCAGTACGACGGCTACGCCGGCGATATATGGAGCCTTGGGGTCAGCATATTGGAATTTTACATGGGTCGGTTTCCGTTCTCGGTGGCGCGAGGAGGCGATTGGGCTAGCTTAATGTGGGCTATTTGTATGTCTCATCCGCCTGAAGCGCCGCACAGTGCTTCCAGAGAGTTCAGGCATTTCATTGCTTGTTGCTTGCAAAGAGAGCCGTCTAAGAGATTGTCGGCGGCGCAGTTGTTGCAGCACCCTTTTATCTCCGGCAATGGCGGTGGCCAGCCCCAGCAACCCCATCAGAATCTTCACCATCTGCTGCCTCCACCGAGGCCTCTTTCTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001932 GO:0001934 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006521 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009626 GO:0009791 GO:0009814 GO:0009838 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010227 GO:0010229 GO:0010364 GO:0010365 GO:0010562 GO:0010565 GO:0010604 GO:0010817 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031335 GO:0031337 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0033238 GO:0033240 GO:0033554 GO:0033674 GO:0034050 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0042762 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045764 GO:0045859 GO:0045860 GO:0045937 GO:0046885 GO:0046886 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051176 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0080090 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1900908 GO:1900910 GO:1900911 GO:1900913 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04626 map04016 map04075 map04626

Pfam Domains

Protein Families

Pkinase

Protein Analysis

357

Amino Acids

39.45

Weight (kDa)

9.06

Isoelectric Point (pI)

60.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	75 - 329	2.1e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	75 - 325	1.3e-38	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	165 - 291	1e-05	Kinase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001741)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51660 AT3G21220 AT3G21220
fragaria_vesca	FvH4_4g27851 FvH4_6g37490 FvH4_6g37492
malus_domestica	MD09G1157600.v1.1 MD17G1173100.v1.1
prunus_persica	Prupe.3G168400_v2.0.a1
pyrus_communis	pycom09g07620 pycom17g13670
rosa_chinensis	RchiOBHm_Chr2g0150331 RchiOBHm_Chr2g0150341 RchiOBHm_Chr2g0150351 RchiOBHm_Chr6g0306151
rosa_laevigata	RLG00000016011 RLG00000020488 RLG00000020490 RLG00000020492
rosa_multiflora	Rmu_sc0002179.1_g000003 Rmu_sc0002179.1_g000004 Rmu_sc0002179.1_g000006
rosa_roxburghii	Rroxscaffold_2G00097240 Rroxscaffold_2G00097250 Rroxscaffold_2G00097270
rosa_rugosa	Rorug02G0420500 Rorug02G0420700 Rorug02G0420800 Rorug06G0347200
rosa_samantha	Rh2AG479800 Rh2AG479900 Rh2AG480000 Rh2BG491900 Rh2BG492000 Rh2BG492100 Rh2CG466100 Rh2CG466200 Rh2CG466300 Rh2DG500700 Rh2DG500900 Rh2DG501000 Rh6AG459700 Rh6BG441300 Rh6CG474100 Rh6DG460400
rosa_wichuraiana	Rw2G039150 Rw2G039160 Rw2G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	81
AatII	GACGTC	2 cut(s)	82, 381
Acc16I	TGCGCA	1 cut(s)	341
AccBSI	CCGCTC	1 cut(s)	246
AccI	GTMKAC	2 cut(s)	264, 381
AccII	CGCG	7 cut(s)	191, 302, 357, 375, 570, 602, 823
AccIII	TCCGGA	1 cut(s)	703
AclWI	GGATC	2 cut(s)	427, 719
AcoI	YGGCCR	3 cut(s)	513, 733, 1003
AcsI	RAATTY	1 cut(s)	788
AcuI	CTGAAG	1 cut(s)	897
AcyI	GRCGYC	3 cut(s)	79, 333, 378
AfaI	GTAC	3 cut(s)	132, 452, 740
AfeI	AGCGCT	1 cut(s)	227
AfiI	CCNNNNNNNGG	5 cut(s)	23, 40, 152, 190, 286
AflIII	ACRYGT	1 cut(s)	411
AhdI	GACNNNNNGTC	1 cut(s)	463
AjnI	CCWGG	3 cut(s)	435, 515, 609
AluBI	AGCT	4 cut(s)	162, 202, 220, 843
AluI	AGCT	4 cut(s)	162, 202, 220, 843
Alw21I	GWGCWC	2 cut(s)	164, 222
Alw26I	GTCTC	2 cut(s)	67, 870
AlwI	GGATC	2 cut(s)	427, 719
AlwNI	CAGNNNCTG	1 cut(s)	442
Ama87I	CYCGRG	2 cut(s)	221, 446
Aor13HI	TCCGGA	1 cut(s)	703
Aor51HI	AGCGCT	1 cut(s)	227
ApeKI	GCWGC	4 cut(s)	13, 199, 973, 1042
ApoI	RAATTY	1 cut(s)	788
AspLEI	GCGC	7 cut(s)	191, 228, 304, 342, 823, 883, 964
AsuC2I	CCSGG	3 cut(s)	24, 153, 293
AsuHPI	GGTGA	2 cut(s)	322, 1025
AsuNHI	GCTAGC	1 cut(s)	839
AvaI	CYCGRG	2 cut(s)	221, 446
AvaII	GGWCC	3 cut(s)	155, 661, 684
BalI	TGGCCA	2 cut(s)	515, 1005
BanII	GRGCYC	2 cut(s)	164, 222
Bbv12I	GWGCWC	2 cut(s)	164, 222
BbvCI	CCTCAGC	2 cut(s)	108, 527
BbvI	GCAGC	4 cut(s)	25, 211, 985, 1029
BccI	CCATC	3 cut(s)	695, 1029, 1044
BceAI	ACGGC	6 cut(s)	320, 442, 475, 748, 760, 925
BciT130I	CCWGG	3 cut(s)	437, 517, 611
BclI	TGATCA	1 cut(s)	594
BcnI	CCSGG	3 cut(s)	24, 153, 293
BcoDI	GTCTC	2 cut(s)	67, 870
BfaI	CTAG	1 cut(s)	840
BfoI	RGCGCY	2 cut(s)	229, 884
BglI	GCCNNNNNGGC	1 cut(s)	288
BglII	AGATCT	1 cut(s)	348
Bme1390I	CCNGG	6 cut(s)	24, 153, 293, 437, 517, 611
Bme18I	GGWCC	3 cut(s)	155, 661, 684
BmeRI	GACNNNNNGTC	1 cut(s)	463
BmeT110I	CYCGRG	2 cut(s)	221, 446
BmiI	GGNNCC	5 cut(s)	48, 608, 663, 685, 767
BmrFI	CCNGG	6 cut(s)	24, 153, 293, 437, 517, 611
BmrI	ACTGGG	1 cut(s)	163
BmsI	GCATC	1 cut(s)	246
BmtI	GCTAGC	1 cut(s)	843
BmuI	ACTGGG	1 cut(s)	163
BpmI	CTGGAG	1 cut(s)	491
Bpu10I	CCTNAGC	2 cut(s)	108, 527
BpuEI	CTTGAG	1 cut(s)	290
BpuMI	CCSGG	3 cut(s)	24, 153, 293
BsaBI	GATNNNNATC	1 cut(s)	726
BsaHI	GRCGYC	3 cut(s)	79, 333, 378
BsaJI	CCNNGG	5 cut(s)	56, 177, 657, 769, 1052
BsaWI	WCCGGW	1 cut(s)	703
BsaXI	ACNNNNNCTCC	2 cut(s)	246, 276
Bsc4I	CCNNNNNNNGG	5 cut(s)	23, 40, 152, 190, 286
Bse118I	RCCGGY	2 cut(s)	549, 752
Bse1I	ACTGG	2 cut(s)	169, 736
Bse3DI	GCAATG	2 cut(s)	915, 1000
Bse8I	GATNNNNATC	1 cut(s)	726
BseAI	TCCGGA	1 cut(s)	703
BseBI	CCWGG	3 cut(s)	437, 517, 611
BseDI	CCNNGG	5 cut(s)	56, 177, 657, 769, 1052
BseGI	GGATG	1 cut(s)	868
BseJI	GATNNNNATC	1 cut(s)	726
BseLI	CCNNNNNNNGG	5 cut(s)	23, 40, 152, 190, 286
BseMI	GCAATG	2 cut(s)	915, 1000
BseMII	CTCAG	3 cut(s)	122, 541, 665
BseNI	ACTGG	2 cut(s)	169, 736
BseRI	GAGGAG	1 cut(s)	840
BseXI	GCAGC	4 cut(s)	25, 211, 985, 1029
BseYI	CCCAGC	3 cut(s)	34, 195, 1011
Bsh1236I	CGCG	7 cut(s)	191, 302, 357, 375, 570, 602, 823
BsiHKAI	GWGCWC	2 cut(s)	164, 222
BsiHKCI	CYCGRG	2 cut(s)	221, 446
BsiSI	CCGG	7 cut(s)	24, 153, 292, 550, 704, 753, 990
BslFI	GGGAC	3 cut(s)	77, 128, 697
BslI	CCNNNNNNNGG	5 cut(s)	23, 40, 152, 190, 286
BsmAI	GTCTC	2 cut(s)	67, 870
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	3 cut(s)	77, 128, 697
BsoBI	CYCGRG	2 cut(s)	221, 446
Bsp1286I	GDGCHC	2 cut(s)	164, 222
Bsp13I	TCCGGA	1 cut(s)	703
Bsp143I	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
Bsp19I	CCATGG	1 cut(s)	657
BspCNI	CTCAG	3 cut(s)	121, 540, 664
BspEI	TCCGGA	1 cut(s)	703
BspFNI	CGCG	7 cut(s)	191, 302, 357, 375, 570, 602, 823
BspLI	GGNNCC	5 cut(s)	48, 608, 663, 685, 767
BspOI	GCTAGC	1 cut(s)	843
BspPI	GGATC	2 cut(s)	427, 719
BsrBI	CCGCTC	1 cut(s)	246
BsrDI	GCAATG	2 cut(s)	915, 1000
BsrFI	RCCGGY	2 cut(s)	549, 752
BsrI	ACTGG	2 cut(s)	169, 736
BssAI	RCCGGY	2 cut(s)	549, 752
BssECI	CCNNGG	5 cut(s)	56, 177, 657, 769, 1052
BssMI	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
BssNI	GRCGYC	3 cut(s)	79, 333, 378
BssT1I	CCWWGG	2 cut(s)	657, 769
Bst2UI	CCWGG	3 cut(s)	437, 517, 611
Bst4CI	ACNGT	2 cut(s)	262, 890
BstACI	GRCGYC	3 cut(s)	79, 333, 378
BstAPI	GCANNNNNTGC	1 cut(s)	970
BstC8I	GCNNGC	6 cut(s)	126, 479, 754, 841, 929, 1007
BstDEI	CTNAG	5 cut(s)	108, 527, 651, 945, 1068
BstDSI	CCRYGG	1 cut(s)	657
BstF5I	GGATG	1 cut(s)	868
BstFNI	CGCG	7 cut(s)	191, 302, 357, 375, 570, 602, 823
BstH2I	RGCGCY	2 cut(s)	229, 884
BstHHI	GCGC	7 cut(s)	191, 228, 304, 342, 823, 883, 964
BstKTI	GATC	8 cut(s)	351, 363, 435, 561, 597, 621, 714, 724
BstMAI	GTCTC	2 cut(s)	67, 870
BstMBI	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
BstNI	CCWGG	3 cut(s)	437, 517, 611
BstNSI	RCATGY	1 cut(s)	415
BstSCI	CCNGG	6 cut(s)	22, 151, 291, 435, 515, 609
BstUI	CGCG	7 cut(s)	191, 302, 357, 375, 570, 602, 823
BstV1I	GCAGC	4 cut(s)	25, 211, 985, 1029
BstX2I	RGATCY	2 cut(s)	348, 432
BstYI	RGATCY	2 cut(s)	348, 432
BtgI	CCRYGG	1 cut(s)	657
BtgZI	GCGATG	1 cut(s)	673
BtsCI	GGATG	1 cut(s)	868
BtsI	GCAGTG	1 cut(s)	45
BtsIMutI	CAGTG	3 cut(s)	45, 258, 895
Cac8I	GCNNGC	6 cut(s)	126, 479, 754, 841, 929, 1007
CaiI	CAGNNNCTG	1 cut(s)	442
CfoI	GCGC	7 cut(s)	191, 228, 304, 342, 823, 883, 964
Cfr10I	RCCGGY	2 cut(s)	549, 752
CpoI	CGGWCCG	1 cut(s)	155
CseI	GACGC	1 cut(s)	341
CsiI	ACCWGGT	1 cut(s)	609
Csp6I	GTAC	3 cut(s)	131, 451, 739
CspCI	CAANNNNNGTGG	2 cut(s)	982, 1017
CspI	CGGWCCG	1 cut(s)	155
CviAII	CATG	5 cut(s)	412, 454, 658, 697, 796
CviQI	GTAC	3 cut(s)	131, 451, 739
DdeI	CTNAG	5 cut(s)	108, 527, 651, 945, 1068
DpnI	GATC	8 cut(s)	350, 362, 434, 560, 596, 620, 713, 723
DpnII	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
DrdI	GACNNNNNNGTC	1 cut(s)	81
DriI	GACNNNNNGTC	1 cut(s)	463
DseDI	GACNNNNNNGTC	1 cut(s)	81
EaeI	YGGCCR	3 cut(s)	513, 733, 1003
Eam1105I	GACNNNNNGTC	1 cut(s)	463
EciI	GGCGGA	3 cut(s)	138, 568, 861
Ecl136II	GAGCTC	2 cut(s)	162, 220
Eco130I	CCWWGG	2 cut(s)	657, 769
Eco147I	AGGCCT	1 cut(s)	1057
Eco24I	GRGCYC	2 cut(s)	164, 222
Eco32I	GATATC	1 cut(s)	574
Eco47I	GGWCC	3 cut(s)	155, 661, 684
Eco47III	AGCGCT	1 cut(s)	227
Eco53kI	GAGCTC	2 cut(s)	162, 220
Eco57I	CTGAAG	1 cut(s)	897
Eco88I	CYCGRG	2 cut(s)	221, 446
EcoICRI	GAGCTC	2 cut(s)	162, 220
EcoO109I	RGGNCCY	1 cut(s)	499
EcoRII	CCWGG	3 cut(s)	435, 515, 609
EcoRV	GATATC	1 cut(s)	574
EcoT14I	CCWWGG	2 cut(s)	657, 769
EcoT38I	GRGCYC	2 cut(s)	164, 222
ErhI	CCWWGG	2 cut(s)	657, 769
Esp3I	CGTCTC	1 cut(s)	67
FaeI	CATG	5 cut(s)	415, 457, 661, 700, 799
FaqI	GGGAC	3 cut(s)	77, 128, 697
FatI	CATG	5 cut(s)	411, 453, 657, 696, 795
FauI	CCCGC	3 cut(s)	54, 105, 455
FbaI	TGATCA	1 cut(s)	594
FblI	GTMKAC	2 cut(s)	264, 381
FokI	GGATG	1 cut(s)	855
FriOI	GRGCYC	2 cut(s)	164, 222
FspBI	CTAG	1 cut(s)	840
FspI	TGCGCA	1 cut(s)	341
GlaI	GCGC	7 cut(s)	190, 227, 303, 341, 822, 882, 963
GsaI	CCCAGC	3 cut(s)	38, 199, 1015
GsuI	CTGGAG	1 cut(s)	491
HaeII	RGCGCY	2 cut(s)	229, 884
HapII	CCGG	7 cut(s)	24, 153, 292, 550, 704, 753, 990
HgaI	GACGC	1 cut(s)	341
HhaI	GCGC	7 cut(s)	191, 228, 304, 342, 823, 883, 964
Hin1I	GRCGYC	3 cut(s)	79, 333, 378
Hin1II	CATG	5 cut(s)	415, 457, 661, 700, 799
Hin6I	GCGC	7 cut(s)	189, 226, 302, 340, 821, 881, 962
HinP1I	GCGC	7 cut(s)	189, 226, 302, 340, 821, 881, 962
HincII	GTYRAC	1 cut(s)	382
HindII	GTYRAC	1 cut(s)	382
HinfI	GANTC	5 cut(s)	586, 637, 643, 700, 1027
HpaII	CCGG	7 cut(s)	24, 153, 292, 550, 704, 753, 990
HphI	GGTGA	2 cut(s)	322, 1025
Hpy166II	GTNNAC	4 cut(s)	265, 298, 382, 565
Hpy188I	TCNGA	7 cut(s)	159, 217, 508, 632, 642, 654, 1026
Hpy188III	TCNNGA	7 cut(s)	86, 241, 487, 616, 682, 704, 897
Hpy8I	GTNNAC	4 cut(s)	265, 298, 382, 565
Hpy99I	CGWCG	8 cut(s)	81, 84, 289, 380, 383, 398, 683, 746
HpyAV	CCTTC	1 cut(s)	490
HpyCH4III	ACNGT	2 cut(s)	262, 890
HpyCH4IV	ACGT	3 cut(s)	79, 378, 393
HpyCH4V	TGCA	5 cut(s)	13, 128, 669, 931, 973
HpyF3I	CTNAG	5 cut(s)	108, 527, 651, 945, 1068
HpySE526I	ACGT	3 cut(s)	79, 378, 393
Hsp92I	GRCGYC	3 cut(s)	79, 333, 378
Hsp92II	CATG	5 cut(s)	415, 457, 661, 700, 799
HspAI	GCGC	7 cut(s)	189, 226, 302, 340, 821, 881, 962
Kpn2I	TCCGGA	1 cut(s)	703
KroI	GCCGGC	1 cut(s)	752
KroNI	GCCGGC	1 cut(s)	754
Ksp22I	TGATCA	1 cut(s)	594
Kzo9I	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
LmnI	GCTCC	3 cut(s)	233, 243, 765
Lsp1109I	GCAGC	4 cut(s)	25, 211, 985, 1029
LweI	GCATC	1 cut(s)	246
MabI	ACCWGGT	1 cut(s)	609
MaeI	CTAG	1 cut(s)	840
MaeII	ACGT	3 cut(s)	79, 378, 393
MaeIII	GTNAC	1 cut(s)	83
MalI	GATC	8 cut(s)	350, 362, 434, 560, 596, 620, 713, 723
MbiI	CCGCTC	1 cut(s)	246
MboI	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
MboII	GAAGA	4 cut(s)	568, 666, 1022, 1056
MflI	RGATCY	2 cut(s)	348, 432
MhlI	GDGCHC	2 cut(s)	164, 222
MlsI	TGGCCA	2 cut(s)	515, 1005
MluCI	AATT	2 cut(s)	670, 788
MluNI	TGGCCA	2 cut(s)	515, 1005
MlyI	GAGTC	2 cut(s)	646, 709
MmeI	TCCRAC	2 cut(s)	255, 620
Mox20I	TGGCCA	2 cut(s)	515, 1005
MreI	CGCCGGCG	1 cut(s)	752
MroI	TCCGGA	1 cut(s)	703
MroNI	GCCGGC	1 cut(s)	752
MscI	TGGCCA	2 cut(s)	515, 1005
MseI	TTAA	1 cut(s)	845
Msp20I	TGGCCA	2 cut(s)	515, 1005
MspA1I	CMGCKG	2 cut(s)	112, 531
MspI	CCGG	7 cut(s)	24, 153, 292, 550, 704, 753, 990
MspR9I	CCNGG	6 cut(s)	24, 153, 293, 437, 517, 611
MvaI	CCWGG	3 cut(s)	437, 517, 611
MvnI	CGCG	7 cut(s)	191, 302, 357, 375, 570, 602, 823
NaeI	GCCGGC	1 cut(s)	754
NciI	CCSGG	3 cut(s)	24, 153, 293
NcoI	CCATGG	1 cut(s)	657
NdeII	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
NgoMIV	GCCGGC	1 cut(s)	752
NheI	GCTAGC	1 cut(s)	839
NlaIII	CATG	5 cut(s)	415, 457, 661, 700, 799
NlaIV	GGNNCC	5 cut(s)	48, 608, 663, 685, 767
NmeAIII	GCCGAG	2 cut(s)	143, 158
NmuCI	GTSAC	1 cut(s)	83
NsbI	TGCGCA	1 cut(s)	341
NspI	RCATGY	1 cut(s)	415
PaeR7I	CTCGAG	2 cut(s)	221, 446
PceI	AGGCCT	1 cut(s)	1057
PciI	ACATGT	1 cut(s)	411
PcsI	WCGNNNNNNNCGW	5 cut(s)	170, 333, 414, 567, 738
PdiI	GCCGGC	1 cut(s)	754
PfeI	GAWTC	3 cut(s)	586, 643, 1027
PflFI	GACNNNGTC	2 cut(s)	78, 81
PleI	GAGTC	2 cut(s)	645, 708
PpsI	GAGTC	2 cut(s)	645, 708
PscI	ACATGT	1 cut(s)	411
Psp124BI	GAGCTC	2 cut(s)	164, 222
Psp6I	CCWGG	3 cut(s)	435, 515, 609
PspFI	CCCAGC	3 cut(s)	34, 195, 1011
PspGI	CCWGG	3 cut(s)	435, 515, 609
PspN4I	GGNNCC	5 cut(s)	48, 608, 663, 685, 767
PspXI	VCTCGAGB	2 cut(s)	221, 446
PstNI	CAGNNNCTG	1 cut(s)	442
PsuI	RGATCY	2 cut(s)	348, 432
PsyI	GACNNNGTC	2 cut(s)	78, 81
RsaI	GTAC	3 cut(s)	132, 452, 740
RsaNI	GTAC	3 cut(s)	131, 451, 739
Rsr2I	CGGWCCG	1 cut(s)	155
RsrII	CGGWCCG	1 cut(s)	155
SacI	GAGCTC	2 cut(s)	164, 222
SalI	GTCGAC	1 cut(s)	380
SaqAI	TTAA	1 cut(s)	845
Sau3AI	GATC	8 cut(s)	348, 360, 432, 558, 594, 618, 711, 721
SchI	GAGTC	2 cut(s)	646, 709
ScrFI	CCNGG	6 cut(s)	24, 153, 293, 437, 517, 611
SduI	GDGCHC	2 cut(s)	164, 222
SexAI	ACCWGGT	1 cut(s)	609
SfaNI	GCATC	1 cut(s)	246
Sfr274I	CTCGAG	2 cut(s)	221, 446
SgrAI	CRCCGGYG	2 cut(s)	549, 752
SinI	GGWCC	3 cut(s)	155, 661, 684
SlaI	CTCGAG	2 cut(s)	221, 446
SmlI	CTYRAG	3 cut(s)	221, 305, 446
SmoI	CTYRAG	3 cut(s)	221, 305, 446
Sse9I	AATT	2 cut(s)	670, 788
SseBI	AGGCCT	1 cut(s)	1057
SspMI	CTAG	1 cut(s)	840
SstI	GAGCTC	2 cut(s)	164, 222
StuI	AGGCCT	1 cut(s)	1057
StyD4I	CCNGG	6 cut(s)	22, 151, 291, 435, 515, 609
StyI	CCWWGG	2 cut(s)	657, 769
TaaI	ACNGT	2 cut(s)	262, 890
TaiI	ACGT	3 cut(s)	82, 381, 396
TaqI	TCGA	6 cut(s)	222, 363, 381, 417, 447, 584
TasI	AATT	2 cut(s)	670, 788
TatI	WGTACW	1 cut(s)	450
TauI	GCSGC	7 cut(s)	19, 22, 194, 357, 534, 886, 962
TfiI	GAWTC	3 cut(s)	586, 643, 1027
Tru1I	TTAA	1 cut(s)	845
Tru9I	TTAA	1 cut(s)	845
TscAI	CASTG	3 cut(s)	45, 265, 895
TseFI	GTSAC	1 cut(s)	83
TseI	GCWGC	4 cut(s)	13, 199, 973, 1042
Tsp45I	GTSAC	1 cut(s)	83
TspDTI	ATGAA	1 cut(s)	904
TspGWI	ACGGA	2 cut(s)	667, 798
TspRI	CASTG	3 cut(s)	45, 265, 895
Tth111I	GACNNNGTC	2 cut(s)	78, 81
VpaK11BI	GGWCC	3 cut(s)	155, 661, 684
XapI	RAATTY	1 cut(s)	788
XceI	RCATGY	1 cut(s)	415
XhoI	CTCGAG	2 cut(s)	221, 446
XmiI	GTMKAC	2 cut(s)	264, 381
XspI	CTAG	1 cut(s)	840
ZraI	GACGTC	2 cut(s)	80, 379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.