Mitogen-activated protein kinase kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51660 AT3G21220 AT3G21220 |
| fragaria_vesca | FvH4_4g27851 FvH4_6g37490 FvH4_6g37492 |
| malus_domestica | MD09G1157600.v1.1 MD17G1173100.v1.1 |
| prunus_persica | Prupe.3G168400_v2.0.a1 |
| pyrus_communis | pycom09g07620 pycom17g13670 |
| rosa_chinensis | RchiOBHm_Chr2g0150331 RchiOBHm_Chr2g0150341 RchiOBHm_Chr2g0150351 RchiOBHm_Chr6g0306151 |
| rosa_laevigata | RLG00000016011 RLG00000020488 RLG00000020490 RLG00000020492 |
| rosa_multiflora | Rmu_sc0002179.1_g000003 Rmu_sc0002179.1_g000004 Rmu_sc0002179.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00097240 Rroxscaffold_2G00097250 Rroxscaffold_2G00097270 |
| rosa_rugosa | Rorug02G0420500 Rorug02G0420700 Rorug02G0420800 Rorug06G0347200 |
| rosa_samantha | Rh2AG479800 Rh2AG479900 Rh2AG480000 Rh2BG491900 Rh2BG492000 Rh2BG492100 Rh2CG466100 Rh2CG466200 Rh2CG466300 Rh2DG500700 Rh2DG500900 Rh2DG501000 Rh6AG459700 Rh6BG441300 Rh6CG474100 Rh6DG460400 |
| rosa_wichuraiana | Rw2G039150 Rw2G039160 Rw2G039170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 697, 1314 |
| AccB1I | GGYRCC | 2 cut(s) | 697, 1314 |
| AccBSI | CCGCTC | 4 cut(s) | 184, 314, 517, 736 |
| AccI | GTMKAC | 4 cut(s) | 5, 394, 607, 777 |
| AccII | CGCG | 3 cut(s) | 815, 1083, 1162 |
| AclI | AACGTT | 1 cut(s) | 103 |
| AclWI | GGATC | 4 cut(s) | 539, 550, 1229, 1338 |
| AcoI | YGGCCR | 2 cut(s) | 580, 802 |
| AcsI | RAATTY | 3 cut(s) | 719, 962, 1299 |
| AcuI | CTGAAG | 1 cut(s) | 1413 |
| AcyI | GRCGYC | 1 cut(s) | 856 |
| AfaI | GTAC | 7 cut(s) | 111, 241, 444, 657, 699, 995, 1316 |
| AgeI | ACCGGT | 1 cut(s) | 596 |
| AgsI | TTSAA | 3 cut(s) | 33, 381, 594 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1070 |
| AjiI | CACGTC | 1 cut(s) | 1072 |
| AjnI | CCWGG | 2 cut(s) | 447, 1527 |
| AluBI | AGCT | 9 cut(s) | 64, 335, 471, 548, 684, 1013, 1257, 1278, 1397 |
| AluI | AGCT | 9 cut(s) | 64, 335, 471, 548, 684, 1013, 1257, 1278, 1397 |
| Alw26I | GTCTC | 2 cut(s) | 828, 1386 |
| AlwI | GGATC | 4 cut(s) | 539, 550, 1229, 1338 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 955 |
| AoxI | GGCC | 4 cut(s) | 176, 580, 802, 1050 |
| ApeKI | GCWGC | 6 cut(s) | 61, 115, 213, 245, 955, 1489 |
| ApoI | RAATTY | 3 cut(s) | 719, 962, 1299 |
| AsiGI | ACCGGT | 1 cut(s) | 596 |
| Asp718I | GGTACC | 2 cut(s) | 697, 1314 |
| AspLEI | GCGC | 1 cut(s) | 1162 |
| AspS9I | GGNCC | 5 cut(s) | 176, 430, 643, 850, 1171 |
| AsuC2I | CCSGG | 2 cut(s) | 401, 1214 |
| AsuHPI | GGTGA | 4 cut(s) | 18, 329, 829, 1033 |
| AsuII | TTCGAA | 1 cut(s) | 867 |
| AvaII | GGWCC | 4 cut(s) | 430, 643, 850, 1171 |
| AxyI | CCTNAGG | 1 cut(s) | 840 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 689, 722 |
| BanI | GGYRCC | 2 cut(s) | 697, 1314 |
| BanII | GRGCYC | 1 cut(s) | 1214 |
| BbvI | GCAGC | 6 cut(s) | 73, 127, 225, 257, 942, 1501 |
| BccI | CCATC | 1 cut(s) | 170 |
| BceAI | ACGGC | 1 cut(s) | 1082 |
| BciT130I | CCWGG | 2 cut(s) | 449, 1529 |
| BciVI | GTATCC | 1 cut(s) | 1340 |
| BclI | TGATCA | 4 cut(s) | 319, 714, 1107, 1534 |
| BcnI | CCSGG | 2 cut(s) | 401, 1214 |
| BcoDI | GTCTC | 2 cut(s) | 828, 1386 |
| BfaI | CTAG | 1 cut(s) | 959 |
| BfuI | GTATCC | 1 cut(s) | 1340 |
| BglII | AGATCT | 1 cut(s) | 861 |
| BisI | GCNGC | 7 cut(s) | 62, 116, 214, 246, 956, 1476, 1490 |
| BlsI | GCNGC | 7 cut(s) | 63, 117, 215, 247, 957, 1477, 1491 |
| Bme1390I | CCNGG | 4 cut(s) | 401, 449, 1214, 1529 |
| Bme18I | GGWCC | 4 cut(s) | 430, 643, 850, 1171 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1070 |
| BmgBI | CACGTC | 1 cut(s) | 1072 |
| BmgT120I | GGNCC | 5 cut(s) | 176, 430, 643, 850, 1171 |
| BmrFI | CCNGG | 4 cut(s) | 401, 449, 1214, 1529 |
| BmrI | ACTGGG | 1 cut(s) | 608 |
| BmsI | GCATC | 3 cut(s) | 84, 573, 1299 |
| BmuI | ACTGGG | 1 cut(s) | 608 |
| Bpu14I | TTCGAA | 1 cut(s) | 867 |
| BpuMI | CCSGG | 2 cut(s) | 401, 1214 |
| BsaAI | YACGTR | 1 cut(s) | 1306 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1236 |
| BsaHI | GRCGYC | 1 cut(s) | 856 |
| BsaI | GGTCTC | 1 cut(s) | 828 |
| BsaJI | CCNNGG | 6 cut(s) | 138, 268, 426, 447, 639, 1527 |
| BsaWI | WCCGGW | 7 cut(s) | 231, 257, 460, 596, 673, 694, 700 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 127, 157, 257, 287, 759, 789 |
| Bse118I | RCCGGY | 5 cut(s) | 596, 800, 804, 1043, 1262 |
| Bse1I | ACTGG | 3 cut(s) | 56, 614, 1355 |
| Bse21I | CCTNAGG | 1 cut(s) | 840 |
| Bse3DI | GCAATG | 2 cut(s) | 1431, 1516 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1236 |
| BseBI | CCWGG | 2 cut(s) | 449, 1529 |
| BseDI | CCNNGG | 6 cut(s) | 138, 268, 426, 447, 639, 1527 |
| BseGI | GGATG | 1 cut(s) | 996 |
| BseJI | GATNNNNATC | 1 cut(s) | 1236 |
| BseMI | GCAATG | 2 cut(s) | 1431, 1516 |
| BseMII | CTCAG | 3 cut(s) | 831, 1397, 1493 |
| BseNI | ACTGG | 3 cut(s) | 56, 614, 1355 |
| BseX3I | CGGCCG | 1 cut(s) | 802 |
| BseXI | GCAGC | 6 cut(s) | 73, 127, 225, 257, 942, 1501 |
| BseYI | CCCAGC | 3 cut(s) | 467, 660, 680 |
| Bsh1236I | CGCG | 3 cut(s) | 815, 1083, 1162 |
| Bsh1285I | CGRYCG | 2 cut(s) | 801, 805 |
| BshFI | GGCC | 4 cut(s) | 178, 582, 804, 1052 |
| BshNI | GGYRCC | 2 cut(s) | 697, 1314 |
| BshTI | ACCGGT | 1 cut(s) | 596 |
| BsiEI | CGRYCG | 2 cut(s) | 801, 805 |
| BsmAI | GTCTC | 2 cut(s) | 828, 1386 |
| BsnI | GGCC | 4 cut(s) | 178, 582, 804, 1052 |
| Bso31I | GGTCTC | 1 cut(s) | 828 |
| Bsp119I | TTCGAA | 1 cut(s) | 867 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1214 |
| Bsp19I | CCATGG | 2 cut(s) | 426, 639 |
| BspANI | GGCC | 4 cut(s) | 178, 582, 804, 1052 |
| BspCNI | CTCAG | 3 cut(s) | 832, 1396, 1492 |
| BspFNI | CGCG | 3 cut(s) | 815, 1083, 1162 |
| BspPI | GGATC | 4 cut(s) | 539, 550, 1229, 1338 |
| BspQI | GCTCTTC | 2 cut(s) | 459, 696 |
| BspT104I | TTCGAA | 1 cut(s) | 867 |
| BspT107I | GGYRCC | 2 cut(s) | 697, 1314 |
| BspTNI | GGTCTC | 1 cut(s) | 828 |
| BsrBI | CCGCTC | 4 cut(s) | 184, 314, 517, 736 |
| BsrDI | GCAATG | 2 cut(s) | 1431, 1516 |
| BsrFI | RCCGGY | 5 cut(s) | 596, 800, 804, 1043, 1262 |
| BsrI | ACTGG | 3 cut(s) | 56, 614, 1355 |
| BssAI | RCCGGY | 5 cut(s) | 596, 800, 804, 1043, 1262 |
| BssECI | CCNNGG | 6 cut(s) | 138, 268, 426, 447, 639, 1527 |
| BssNAI | GTATAC | 2 cut(s) | 395, 608 |
| BssNI | GRCGYC | 1 cut(s) | 856 |
| BssT1I | CCWWGG | 2 cut(s) | 426, 639 |
| Bst1107I | GTATAC | 2 cut(s) | 395, 608 |
| Bst2UI | CCWGG | 2 cut(s) | 449, 1529 |
| Bst4CI | ACNGT | 1 cut(s) | 775 |
| Bst6I | CTCTTC | 4 cut(s) | 459, 672, 696, 864 |
| BstACI | GRCGYC | 1 cut(s) | 856 |
| BstBAI | YACGTR | 1 cut(s) | 1306 |
| BstBI | TTCGAA | 1 cut(s) | 867 |
| BstC8I | GCNNGC | 6 cut(s) | 186, 519, 806, 1095, 1264, 1438 |
| BstDEI | CTNAG | 3 cut(s) | 840, 1383, 1479 |
| BstDSI | CCRYGG | 2 cut(s) | 426, 639 |
| BstF5I | GGATG | 1 cut(s) | 996 |
| BstFNI | CGCG | 3 cut(s) | 815, 1083, 1162 |
| BstHHI | GCGC | 1 cut(s) | 1162 |
| BstMAI | GTCTC | 2 cut(s) | 828, 1386 |
| BstMCI | CGRYCG | 2 cut(s) | 801, 805 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 251, 1263, 1453 |
| BstNI | CCWGG | 2 cut(s) | 449, 1529 |
| BstNSI | RCATGY | 1 cut(s) | 88 |
| BstSCI | CCNGG | 4 cut(s) | 399, 447, 1212, 1527 |
| BstSNI | TACGTA | 1 cut(s) | 1306 |
| BstUI | CGCG | 3 cut(s) | 815, 1083, 1162 |
| BstV1I | GCAGC | 6 cut(s) | 73, 127, 225, 257, 942, 1501 |
| BstX2I | RGATCY | 1 cut(s) | 861 |
| BstYI | RGATCY | 1 cut(s) | 861 |
| BstZ17I | GTATAC | 2 cut(s) | 395, 608 |
| BstZI | CGGCCG | 1 cut(s) | 802 |
| Bsu36I | CCTNAGG | 1 cut(s) | 840 |
| BsuI | GTATCC | 1 cut(s) | 1340 |
| BsuRI | GGCC | 4 cut(s) | 178, 582, 804, 1052 |
| BtgI | CCRYGG | 2 cut(s) | 426, 639 |
| BtrI | CACGTC | 1 cut(s) | 1072 |
| BtsCI | GGATG | 1 cut(s) | 996 |
| BtsIMutI | CAGTG | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 6 cut(s) | 186, 519, 806, 1095, 1264, 1438 |
| CaiI | CAGNNNCTG | 1 cut(s) | 955 |
| CfoI | GCGC | 1 cut(s) | 1162 |
| Cfr10I | RCCGGY | 5 cut(s) | 596, 800, 804, 1043, 1262 |
| Cfr13I | GGNCC | 5 cut(s) | 176, 430, 643, 850, 1171 |
| CpoI | CGGWCCG | 1 cut(s) | 850 |
| CseI | GACGC | 2 cut(s) | 845, 1398 |
| Csp6I | GTAC | 7 cut(s) | 110, 240, 443, 656, 698, 994, 1315 |
| CspAI | ACCGGT | 1 cut(s) | 596 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1498, 1533 |
| CspI | CGGWCCG | 1 cut(s) | 850 |
| CviAII | CATG | 7 cut(s) | 85, 410, 427, 623, 640, 967, 1207 |
| CviQI | GTAC | 7 cut(s) | 110, 240, 443, 656, 698, 994, 1315 |
| DdeI | CTNAG | 3 cut(s) | 840, 1383, 1479 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1070 |
| EaeI | YGGCCR | 2 cut(s) | 580, 802 |
| EagI | CGGCCG | 1 cut(s) | 802 |
| Eam1104I | CTCTTC | 4 cut(s) | 459, 672, 696, 864 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1070 |
| EarI | CTCTTC | 4 cut(s) | 459, 672, 696, 864 |
| EciI | GGCGGA | 1 cut(s) | 241 |
| EclXI | CGGCCG | 1 cut(s) | 802 |
| Eco105I | TACGTA | 1 cut(s) | 1306 |
| Eco130I | CCWWGG | 2 cut(s) | 426, 639 |
| Eco24I | GRGCYC | 1 cut(s) | 1214 |
| Eco31I | GGTCTC | 1 cut(s) | 828 |
| Eco32I | GATATC | 1 cut(s) | 1087 |
| Eco47I | GGWCC | 4 cut(s) | 430, 643, 850, 1171 |
| Eco52I | CGGCCG | 1 cut(s) | 802 |
| Eco57I | CTGAAG | 1 cut(s) | 1413 |
| Eco81I | CCTNAGG | 1 cut(s) | 840 |
| EcoRI | GAATTC | 1 cut(s) | 962 |
| EcoRII | CCWGG | 2 cut(s) | 447, 1527 |
| EcoRV | GATATC | 1 cut(s) | 1087 |
| EcoT14I | CCWWGG | 2 cut(s) | 426, 639 |
| EcoT38I | GRGCYC | 1 cut(s) | 1214 |
| ErhI | CCWWGG | 2 cut(s) | 426, 639 |
| FaeI | CATG | 7 cut(s) | 88, 413, 430, 626, 643, 970, 1210 |
| FatI | CATG | 7 cut(s) | 84, 409, 426, 622, 639, 966, 1206 |
| FauI | CCCGC | 5 cut(s) | 177, 307, 510, 729, 1102 |
| FbaI | TGATCA | 4 cut(s) | 319, 714, 1107, 1534 |
| FblI | GTMKAC | 4 cut(s) | 5, 394, 607, 777 |
| Fnu4HI | GCNGC | 7 cut(s) | 62, 116, 214, 246, 956, 1476, 1490 |
| FokI | GGATG | 1 cut(s) | 983 |
| FriOI | GRGCYC | 1 cut(s) | 1214 |
| Fsp4HI | GCNGC | 7 cut(s) | 62, 116, 214, 246, 956, 1476, 1490 |
| FspBI | CTAG | 1 cut(s) | 959 |
| GlaI | GCGC | 1 cut(s) | 1161 |
| GluI | GCNGC | 7 cut(s) | 62, 116, 214, 246, 956, 1476, 1490 |
| GsaI | CCCAGC | 3 cut(s) | 471, 664, 684 |
| HaeIII | GGCC | 4 cut(s) | 178, 582, 804, 1052 |
| HgaI | GACGC | 2 cut(s) | 845, 1398 |
| HhaI | GCGC | 1 cut(s) | 1162 |
| Hin1I | GRCGYC | 1 cut(s) | 856 |
| Hin1II | CATG | 7 cut(s) | 88, 413, 430, 626, 643, 970, 1210 |
| Hin6I | GCGC | 1 cut(s) | 1160 |
| HinP1I | GCGC | 1 cut(s) | 1160 |
| HincII | GTYRAC | 2 cut(s) | 6, 47 |
| HindII | GTYRAC | 2 cut(s) | 6, 47 |
| HinfI | GANTC | 6 cut(s) | 23, 76, 130, 704, 845, 1467 |
| HphI | GGTGA | 4 cut(s) | 18, 329, 829, 1033 |
| Hpy166II | GTNNAC | 7 cut(s) | 6, 47, 395, 608, 778, 1078, 1520 |
| Hpy188III | TCNNGA | 5 cut(s) | 557, 568, 1105, 1391, 1413 |
| Hpy8I | GTNNAC | 7 cut(s) | 6, 47, 395, 608, 778, 1078, 1520 |
| Hpy99I | CGWCG | 6 cut(s) | 10, 151, 484, 911, 1007, 1076 |
| HpyAV | CCTTC | 4 cut(s) | 39, 272, 1330, 1410 |
| HpyCH4III | ACNGT | 1 cut(s) | 775 |
| HpyCH4IV | ACGT | 5 cut(s) | 43, 103, 906, 1071, 1305 |
| HpyCH4V | TGCA | 3 cut(s) | 97, 1447, 1489 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 251, 1263, 1453 |
| HpyF3I | CTNAG | 3 cut(s) | 840, 1383, 1479 |
| HpySE526I | ACGT | 5 cut(s) | 43, 103, 906, 1071, 1305 |
| Hsp92I | GRCGYC | 1 cut(s) | 856 |
| Hsp92II | CATG | 7 cut(s) | 88, 413, 430, 626, 643, 970, 1210 |
| HspAI | GCGC | 1 cut(s) | 1160 |
| KpnI | GGTACC | 2 cut(s) | 701, 1318 |
| KroI | GCCGGC | 2 cut(s) | 804, 1262 |
| KroNI | GCCGGC | 2 cut(s) | 806, 1264 |
| Ksp22I | TGATCA | 4 cut(s) | 319, 714, 1107, 1534 |
| LguI | GCTCTTC | 2 cut(s) | 459, 696 |
| LmnI | GCTCC | 9 cut(s) | 148, 278, 305, 311, 481, 508, 761, 1275, 1402 |
| Lsp1109I | GCAGC | 6 cut(s) | 73, 127, 225, 257, 942, 1501 |
| LweI | GCATC | 3 cut(s) | 84, 573, 1299 |
| MaeI | CTAG | 1 cut(s) | 959 |
| MaeII | ACGT | 5 cut(s) | 43, 103, 906, 1071, 1305 |
| MaeIII | GTNAC | 4 cut(s) | 68, 705, 1178, 1334 |
| MbiI | CCGCTC | 4 cut(s) | 184, 314, 517, 736 |
| MboII | GAAGA | 7 cut(s) | 446, 582, 659, 662, 683, 856, 881 |
| MflI | RGATCY | 1 cut(s) | 861 |
| MhlI | GDGCHC | 1 cut(s) | 1214 |
| MluCI | AATT | 6 cut(s) | 719, 962, 1021, 1131, 1246, 1299 |
| MlyI | GAGTC | 2 cut(s) | 713, 839 |
| MmeI | TCCRAC | 2 cut(s) | 170, 503 |
| MreI | CGCCGGCG | 1 cut(s) | 1262 |
| MroNI | GCCGGC | 2 cut(s) | 804, 1262 |
| MseI | TTAA | 2 cut(s) | 983, 1361 |
| MspR9I | CCNGG | 4 cut(s) | 401, 449, 1214, 1529 |
| MvaI | CCWGG | 2 cut(s) | 449, 1529 |
| MvnI | CGCG | 3 cut(s) | 815, 1083, 1162 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 251, 1263, 1453 |
| NaeI | GCCGGC | 2 cut(s) | 806, 1264 |
| NciI | CCSGG | 2 cut(s) | 401, 1214 |
| NcoI | CCATGG | 2 cut(s) | 426, 639 |
| NgoMIV | GCCGGC | 2 cut(s) | 804, 1262 |
| NlaIII | CATG | 7 cut(s) | 88, 413, 430, 626, 643, 970, 1210 |
| NmeAIII | GCCGAG | 8 cut(s) | 119, 249, 316, 452, 529, 665, 1009, 1451 |
| NmuCI | GTSAC | 1 cut(s) | 705 |
| NspI | RCATGY | 1 cut(s) | 88 |
| NspV | TTCGAA | 1 cut(s) | 867 |
| PciSI | GCTCTTC | 2 cut(s) | 459, 696 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 927, 1080 |
| PdiI | GCCGGC | 2 cut(s) | 806, 1264 |
| PfeI | GAWTC | 4 cut(s) | 23, 76, 130, 1467 |
| PflFI | GACNNNGTC | 2 cut(s) | 574, 848 |
| PinAI | ACCGGT | 1 cut(s) | 596 |
| PkrI | GCNGC | 7 cut(s) | 63, 117, 215, 247, 957, 1477, 1491 |
| PleI | GAGTC | 2 cut(s) | 712, 839 |
| PpsI | GAGTC | 2 cut(s) | 712, 839 |
| Ppu21I | YACGTR | 1 cut(s) | 1306 |
| Psp1406I | AACGTT | 1 cut(s) | 103 |
| Psp6I | CCWGG | 2 cut(s) | 447, 1527 |
| PspFI | CCCAGC | 3 cut(s) | 467, 660, 680 |
| PspGI | CCWGG | 2 cut(s) | 447, 1527 |
| PspPI | GGNCC | 5 cut(s) | 176, 430, 643, 850, 1171 |
| PstNI | CAGNNNCTG | 1 cut(s) | 955 |
| PsuI | RGATCY | 1 cut(s) | 861 |
| PsyI | GACNNNGTC | 2 cut(s) | 574, 848 |
| RsaI | GTAC | 7 cut(s) | 111, 241, 444, 657, 699, 995, 1316 |
| RsaNI | GTAC | 7 cut(s) | 110, 240, 443, 656, 698, 994, 1315 |
| Rsr2I | CGGWCCG | 1 cut(s) | 850 |
| RsrII | CGGWCCG | 1 cut(s) | 850 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SapI | GCTCTTC | 2 cut(s) | 459, 696 |
| SaqAI | TTAA | 2 cut(s) | 983, 1361 |
| SatI | GCNGC | 7 cut(s) | 62, 116, 214, 246, 956, 1476, 1490 |
| Sau96I | GGNCC | 5 cut(s) | 176, 430, 643, 850, 1171 |
| SchI | GAGTC | 2 cut(s) | 713, 839 |
| ScrFI | CCNGG | 4 cut(s) | 401, 449, 1214, 1529 |
| SduI | GDGCHC | 1 cut(s) | 1214 |
| SfaNI | GCATC | 3 cut(s) | 84, 573, 1299 |
| SfuI | TTCGAA | 1 cut(s) | 867 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1262 |
| SinI | GGWCC | 4 cut(s) | 430, 643, 850, 1171 |
| SnaBI | TACGTA | 1 cut(s) | 1306 |
| Sse9I | AATT | 6 cut(s) | 719, 962, 1021, 1131, 1246, 1299 |
| SspMI | CTAG | 1 cut(s) | 959 |
| StyD4I | CCNGG | 4 cut(s) | 399, 447, 1212, 1527 |
| StyI | CCWWGG | 2 cut(s) | 426, 639 |
| TaaI | ACNGT | 1 cut(s) | 775 |
| TaiI | ACGT | 5 cut(s) | 46, 106, 909, 1074, 1308 |
| TaqI | TCGA | 4 cut(s) | 5, 92, 867, 930 |
| TaqII | GACCGA | 1 cut(s) | 838 |
| TasI | AATT | 6 cut(s) | 719, 962, 1021, 1131, 1246, 1299 |
| TatI | WGTACW | 1 cut(s) | 993 |
| TauI | GCSGC | 1 cut(s) | 1478 |
| TfiI | GAWTC | 4 cut(s) | 23, 76, 130, 1467 |
| Tru1I | TTAA | 2 cut(s) | 983, 1361 |
| Tru9I | TTAA | 2 cut(s) | 983, 1361 |
| TscAI | CASTG | 1 cut(s) | 56 |
| TseFI | GTSAC | 1 cut(s) | 705 |
| TseI | GCWGC | 6 cut(s) | 61, 115, 213, 245, 955, 1489 |
| Tsp45I | GTSAC | 1 cut(s) | 705 |
| TspDTI | ATGAA | 4 cut(s) | 955, 1137, 1420, 1489 |
| TspGWI | ACGGA | 8 cut(s) | 97, 164, 227, 430, 497, 643, 846, 987 |
| TspRI | CASTG | 1 cut(s) | 56 |
| Tth111I | GACNNNGTC | 2 cut(s) | 574, 848 |
| VpaK11BI | GGWCC | 4 cut(s) | 430, 643, 850, 1171 |
| XapI | RAATTY | 3 cut(s) | 719, 962, 1299 |
| XceI | RCATGY | 1 cut(s) | 88 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 169 |
| XmiI | GTMKAC | 4 cut(s) | 5, 394, 607, 777 |
| XspI | CTAG | 1 cut(s) | 959 |