Rmu_sc0002179.1_g000006

Mitogen-activated protein kinase kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002179.1
Physical Location & Seq
Forward (+)
32044 .. 33159
1116 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002179.1_g000006.1.cds

Sequence Viewer

Length: 1116 bp
atggaccaaagttccgtaccccaggcttttcctccggttcccagctcggctccgacggaggaacttcctatcaacttcttggagccggagcgggcgatcaacgggatcagaagcggatcagctcggcttcgtgaaagcatcttgacgaggtctggccgatcatcttcaaccggtaaaagtatacacccagtaaaacatggtaagagtttctccatggaccaaagttccgtaccccagcctcttcttccggttcccagctcggctcttccagtaccggagtcacttctgatcaacttctcggatatagagcgggagaaaaaaccgattagaagcggagccggaggcacggtctacaaagccgttcacaagccgaccggcctgctctacgcggtgaaagtgatctacggagaccctgaggactcggtccggcgtcagatcttcgaagagttccaagtcctctgcaaagttgctaaccctaacgtcgtcaagtgctacgacattttcgatcacaacagcgagatacaggtgctgctagaattcatggacggaggttcgttaaagggcaagtacatccacgacgagaaggctctctccaatttggctcggcagatcctcaccggcttggcctatctccacagacggcacgtcgtccaccgcgatatcaagcccgctaatctcttgatcaacacccgaaatgaagtaaaaattgctgatttcgtgggaaaagttttggcgcagactatggacccttgtaactcttgtgtgggaaatatagcctacatgagcccggagaggatcaaccccgatctcaatcagggcaattacgaccgctacgccggcgatatttggagctttggggtcagcatcttggaaatttacgtaggtcggtaccccttctctgtggatcgttaccaaaaaggatactggttccgcttaacttgggtaatatgtatgtctcagcctcctgaagctccttctactgcgtccaaagagttcaggtatttcattgcttgctgtttgcaacgagagccgaataaaagattctcggcggctcagttgttgcagcacccattcatctctggcaatggcgctggacagaccctggttgatcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001932 GO:0001934 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006521 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009626 GO:0009791 GO:0009814 GO:0009838 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010227 GO:0010229 GO:0010364 GO:0010365 GO:0010562 GO:0010565 GO:0010604 GO:0010817 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031335 GO:0031337 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0033238 GO:0033240 GO:0033554 GO:0033674 GO:0034050 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0042762 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045764 GO:0045859 GO:0045860 GO:0045937 GO:0046885 GO:0046886 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051176 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0080090 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1900908 GO:1900910 GO:1900911 GO:1900913 GO:1901564
Pfam Domains
Protein Families

Protein Analysis

371

Amino Acids

41.43

Weight (kDa)

8.72

Isoelectric Point (pI)

56.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 888
AccB1I GGYRCC 1 cut(s) 888
AccBSI CCGCTC 2 cut(s) 91, 310
AccI GTMKAC 2 cut(s) 181, 351
AccII CGCG 2 cut(s) 389, 657
AclWI GGATC 5 cut(s) 113, 124, 604, 803, 912
AcoI YGGCCR 1 cut(s) 154
AcsI RAATTY 2 cut(s) 536, 873
AcuI CTGAAG 1 cut(s) 987
AcyI GRCGYC 1 cut(s) 430
AfaI GTAC 5 cut(s) 18, 231, 273, 569, 890
AgeI ACCGGT 1 cut(s) 170
AgsI TTSAA 1 cut(s) 168
AhdI GACNNNNNGTC 1 cut(s) 644
AjiI CACGTC 1 cut(s) 646
AjnI CCWGG 2 cut(s) 21, 1101
AluBI AGCT 5 cut(s) 45, 122, 258, 852, 971
AluI AGCT 5 cut(s) 45, 122, 258, 852, 971
Alw26I GTCTC 2 cut(s) 402, 960
AlwI GGATC 5 cut(s) 113, 124, 604, 803, 912
AlwNI CAGNNNCTG 2 cut(s) 529, 1102
AoxI GGCC 3 cut(s) 154, 376, 624
ApeKI GCWGC 2 cut(s) 529, 1063
ApoI RAATTY 2 cut(s) 536, 873
AsiGI ACCGGT 1 cut(s) 170
Asp718I GGTACC 1 cut(s) 888
AspLEI GCGC 2 cut(s) 736, 1091
AspS9I GGNCC 4 cut(s) 4, 217, 424, 745
AsuC2I CCSGG 1 cut(s) 788
AsuHPI GGTGA 2 cut(s) 403, 607
AsuII TTCGAA 1 cut(s) 441
AvaII GGWCC 4 cut(s) 4, 217, 424, 745
AxyI CCTNAGG 1 cut(s) 414
BanI GGYRCC 1 cut(s) 888
BanII GRGCYC 1 cut(s) 788
BbvI GCAGC 2 cut(s) 516, 1075
BceAI ACGGC 2 cut(s) 344, 656
BcgI CGANNNNNNTGC 2 cut(s) 361, 395
BciT130I CCWGG 2 cut(s) 23, 1103
BciVI GTATCC 1 cut(s) 914
BclI TGATCA 3 cut(s) 288, 681, 1108
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 2 cut(s) 402, 960
BfaI CTAG 1 cut(s) 533
BfoI RGCGCY 1 cut(s) 1092
BfuI GTATCC 1 cut(s) 914
BglII AGATCT 1 cut(s) 435
BisI GCNGC 3 cut(s) 530, 1050, 1064
BlsI GCNGC 3 cut(s) 531, 1051, 1065
Bme1390I CCNGG 3 cut(s) 23, 788, 1103
Bme18I GGWCC 4 cut(s) 4, 217, 424, 745
BmeRI GACNNNNNGTC 1 cut(s) 644
BmgBI CACGTC 1 cut(s) 646
BmgT120I GGNCC 4 cut(s) 4, 217, 424, 745
BmiI GGNNCC 8 cut(s) 39, 51, 84, 252, 337, 747, 890, 929
BmrFI CCNGG 3 cut(s) 23, 788, 1103
BmrI ACTGGG 1 cut(s) 182
BmsI GCATC 2 cut(s) 147, 873
BmuI ACTGGG 1 cut(s) 182
Bpu14I TTCGAA 1 cut(s) 441
BpuMI CCSGG 1 cut(s) 788
BsaAI YACGTR 1 cut(s) 880
BsaBI GATNNNNATC 1 cut(s) 810
BsaHI GRCGYC 1 cut(s) 430
BsaI GGTCTC 1 cut(s) 402
BsaJI CCNNGG 3 cut(s) 21, 213, 1101
BsaWI WCCGGW 4 cut(s) 34, 170, 247, 274
BsaXI ACNNNNNCTCC 2 cut(s) 333, 363
Bse118I RCCGGY 4 cut(s) 170, 374, 617, 836
Bse1I ACTGG 3 cut(s) 188, 269, 929
Bse21I CCTNAGG 1 cut(s) 414
Bse3DI GCAATG 2 cut(s) 1005, 1090
Bse8I GATNNNNATC 1 cut(s) 810
BseBI CCWGG 2 cut(s) 23, 1103
BseDI CCNNGG 3 cut(s) 21, 213, 1101
BseGI GGATG 1 cut(s) 570
BseJI GATNNNNATC 1 cut(s) 810
BseMI GCAATG 2 cut(s) 1005, 1090
BseMII CTCAG 3 cut(s) 405, 971, 1067
BseNI ACTGG 3 cut(s) 188, 269, 929
BseXI GCAGC 2 cut(s) 516, 1075
BseYI CCCAGC 3 cut(s) 41, 234, 254
Bsh1236I CGCG 2 cut(s) 389, 657
Bsh1285I CGRYCG 2 cut(s) 375, 829
BshFI GGCC 3 cut(s) 156, 378, 626
BshNI GGYRCC 1 cut(s) 888
BshTI ACCGGT 1 cut(s) 170
BsiEI CGRYCG 2 cut(s) 375, 829
BsmAI GTCTC 2 cut(s) 402, 960
BsnI GGCC 3 cut(s) 156, 378, 626
Bso31I GGTCTC 1 cut(s) 402
Bsp119I TTCGAA 1 cut(s) 441
Bsp1286I GDGCHC 1 cut(s) 788
Bsp19I CCATGG 1 cut(s) 213
BspANI GGCC 3 cut(s) 156, 378, 626
BspCNI CTCAG 3 cut(s) 406, 970, 1066
BspFNI CGCG 2 cut(s) 389, 657
BspLI GGNNCC 8 cut(s) 39, 51, 84, 252, 337, 747, 890, 929
BspPI GGATC 5 cut(s) 113, 124, 604, 803, 912
BspQI GCTCTTC 1 cut(s) 270
BspT104I TTCGAA 1 cut(s) 441
BspT107I GGYRCC 1 cut(s) 888
BspTNI GGTCTC 1 cut(s) 402
BsrBI CCGCTC 2 cut(s) 91, 310
BsrDI GCAATG 2 cut(s) 1005, 1090
BsrFI RCCGGY 4 cut(s) 170, 374, 617, 836
BsrI ACTGG 3 cut(s) 188, 269, 929
BssAI RCCGGY 4 cut(s) 170, 374, 617, 836
BssECI CCNNGG 3 cut(s) 21, 213, 1101
BssNAI GTATAC 1 cut(s) 182
BssNI GRCGYC 1 cut(s) 430
BssT1I CCWWGG 1 cut(s) 213
Bst1107I GTATAC 1 cut(s) 182
Bst2UI CCWGG 2 cut(s) 23, 1103
Bst4CI ACNGT 1 cut(s) 349
Bst6I CTCTTC 3 cut(s) 246, 270, 438
BstACI GRCGYC 1 cut(s) 430
BstBAI YACGTR 1 cut(s) 880
BstBI TTCGAA 1 cut(s) 441
BstC8I GCNNGC 5 cut(s) 93, 380, 669, 838, 1012
BstDEI CTNAG 3 cut(s) 414, 957, 1053
BstDSI CCRYGG 1 cut(s) 213
BstF5I GGATG 1 cut(s) 570
BstFNI CGCG 2 cut(s) 389, 657
BstH2I RGCGCY 1 cut(s) 1092
BstHHI GCGC 2 cut(s) 736, 1091
BstMAI GTCTC 2 cut(s) 402, 960
BstMCI CGRYCG 2 cut(s) 375, 829
BstMWI GCNNNNNNNGC 2 cut(s) 837, 1027
BstNI CCWGG 2 cut(s) 23, 1103
BstSCI CCNGG 3 cut(s) 21, 786, 1101
BstSNI TACGTA 1 cut(s) 880
BstUI CGCG 2 cut(s) 389, 657
BstV1I GCAGC 2 cut(s) 516, 1075
BstX2I RGATCY 2 cut(s) 435, 609
BstYI RGATCY 2 cut(s) 435, 609
BstZ17I GTATAC 1 cut(s) 182
Bsu36I CCTNAGG 1 cut(s) 414
BsuI GTATCC 1 cut(s) 914
BsuRI GGCC 3 cut(s) 156, 378, 626
BtgI CCRYGG 1 cut(s) 213
BtrI CACGTC 1 cut(s) 646
BtsCI GGATG 1 cut(s) 570
Cac8I GCNNGC 5 cut(s) 93, 380, 669, 838, 1012
CaiI CAGNNNCTG 2 cut(s) 529, 1102
CfoI GCGC 2 cut(s) 736, 1091
Cfr10I RCCGGY 4 cut(s) 170, 374, 617, 836
Cfr13I GGNCC 4 cut(s) 4, 217, 424, 745
CpoI CGGWCCG 1 cut(s) 424
CseI GACGC 2 cut(s) 419, 972
Csp6I GTAC 5 cut(s) 17, 230, 272, 568, 889
CspAI ACCGGT 1 cut(s) 170
CspI CGGWCCG 1 cut(s) 424
CviAII CATG 4 cut(s) 197, 214, 541, 781
CviQI GTAC 5 cut(s) 17, 230, 272, 568, 889
DdeI CTNAG 3 cut(s) 414, 957, 1053
DriI GACNNNNNGTC 1 cut(s) 644
EaeI YGGCCR 1 cut(s) 154
Eam1104I CTCTTC 3 cut(s) 246, 270, 438
Eam1105I GACNNNNNGTC 1 cut(s) 644
EarI CTCTTC 3 cut(s) 246, 270, 438
Eco105I TACGTA 1 cut(s) 880
Eco130I CCWWGG 1 cut(s) 213
Eco24I GRGCYC 1 cut(s) 788
Eco31I GGTCTC 1 cut(s) 402
Eco32I GATATC 1 cut(s) 661
Eco47I GGWCC 4 cut(s) 4, 217, 424, 745
Eco57I CTGAAG 1 cut(s) 987
Eco81I CCTNAGG 1 cut(s) 414
EcoRI GAATTC 1 cut(s) 536
EcoRII CCWGG 2 cut(s) 21, 1101
EcoRV GATATC 1 cut(s) 661
EcoT14I CCWWGG 1 cut(s) 213
EcoT38I GRGCYC 1 cut(s) 788
ErhI CCWWGG 1 cut(s) 213
FaeI CATG 4 cut(s) 200, 217, 544, 784
FatI CATG 4 cut(s) 196, 213, 540, 780
FauI CCCGC 3 cut(s) 84, 303, 676
FbaI TGATCA 3 cut(s) 288, 681, 1108
FblI GTMKAC 2 cut(s) 181, 351
Fnu4HI GCNGC 3 cut(s) 530, 1050, 1064
FokI GGATG 1 cut(s) 557
FriOI GRGCYC 1 cut(s) 788
Fsp4HI GCNGC 3 cut(s) 530, 1050, 1064
FspBI CTAG 1 cut(s) 533
GlaI GCGC 2 cut(s) 735, 1090
GluI GCNGC 3 cut(s) 530, 1050, 1064
GsaI CCCAGC 3 cut(s) 45, 238, 258
HaeII RGCGCY 1 cut(s) 1092
HaeIII GGCC 3 cut(s) 156, 378, 626
HgaI GACGC 2 cut(s) 419, 972
HhaI GCGC 2 cut(s) 736, 1091
Hin1I GRCGYC 1 cut(s) 430
Hin1II CATG 4 cut(s) 200, 217, 544, 784
Hin6I GCGC 2 cut(s) 734, 1089
HinP1I GCGC 2 cut(s) 734, 1089
HinfI GANTC 3 cut(s) 278, 419, 1041
HphI GGTGA 2 cut(s) 403, 607
Hpy166II GTNNAC 4 cut(s) 182, 352, 364, 652
Hpy188I TCNGA 5 cut(s) 54, 110, 288, 301, 435
Hpy188III TCNNGA 4 cut(s) 131, 142, 679, 965
Hpy8I GTNNAC 4 cut(s) 182, 352, 364, 652
Hpy99I CGWCG 4 cut(s) 58, 485, 581, 650
HpyAV CCTTC 3 cut(s) 577, 904, 984
HpyCH4III ACNGT 1 cut(s) 349
HpyCH4IV ACGT 3 cut(s) 480, 645, 879
HpyCH4V TGCA 3 cut(s) 462, 1021, 1063
HpyF10VI GCNNNNNNNGC 2 cut(s) 837, 1027
HpyF3I CTNAG 3 cut(s) 414, 957, 1053
HpySE526I ACGT 3 cut(s) 480, 645, 879
Hsp92I GRCGYC 1 cut(s) 430
Hsp92II CATG 4 cut(s) 200, 217, 544, 784
HspAI GCGC 2 cut(s) 734, 1089
KpnI GGTACC 1 cut(s) 892
KroI GCCGGC 1 cut(s) 836
KroNI GCCGGC 1 cut(s) 838
Ksp22I TGATCA 3 cut(s) 288, 681, 1108
LguI GCTCTTC 1 cut(s) 270
LmnI GCTCC 6 cut(s) 55, 82, 88, 335, 849, 976
Lsp1109I GCAGC 2 cut(s) 516, 1075
LweI GCATC 2 cut(s) 147, 873
MaeI CTAG 1 cut(s) 533
MaeII ACGT 3 cut(s) 480, 645, 879
MaeIII GTNAC 3 cut(s) 279, 752, 908
MbiI CCGCTC 2 cut(s) 91, 310
MboII GAAGA 6 cut(s) 156, 233, 236, 257, 430, 455
MflI RGATCY 2 cut(s) 435, 609
MhlI GDGCHC 1 cut(s) 788
MluCI AATT 5 cut(s) 536, 595, 705, 820, 873
MlyI GAGTC 2 cut(s) 287, 413
MmeI TCCRAC 1 cut(s) 77
MreI CGCCGGCG 1 cut(s) 836
MroNI GCCGGC 1 cut(s) 836
MseI TTAA 2 cut(s) 557, 935
MspR9I CCNGG 3 cut(s) 23, 788, 1103
MvaI CCWGG 2 cut(s) 23, 1103
MvnI CGCG 2 cut(s) 389, 657
MwoI GCNNNNNNNGC 2 cut(s) 837, 1027
NaeI GCCGGC 1 cut(s) 838
NciI CCSGG 1 cut(s) 788
NcoI CCATGG 1 cut(s) 213
NgoMIV GCCGGC 1 cut(s) 836
NlaIII CATG 4 cut(s) 200, 217, 544, 784
NlaIV GGNNCC 8 cut(s) 39, 51, 84, 252, 337, 747, 890, 929
NmeAIII GCCGAG 5 cut(s) 26, 103, 239, 583, 1025
NmuCI GTSAC 1 cut(s) 279
NspV TTCGAA 1 cut(s) 441
PciSI GCTCTTC 1 cut(s) 270
PcsI WCGNNNNNNNCGW 2 cut(s) 501, 654
PdiI GCCGGC 1 cut(s) 838
PfeI GAWTC 1 cut(s) 1041
PflFI GACNNNGTC 2 cut(s) 148, 422
PinAI ACCGGT 1 cut(s) 170
PkrI GCNGC 3 cut(s) 531, 1051, 1065
PleI GAGTC 2 cut(s) 286, 413
PpsI GAGTC 2 cut(s) 286, 413
Ppu21I YACGTR 1 cut(s) 880
Psp6I CCWGG 2 cut(s) 21, 1101
PspFI CCCAGC 3 cut(s) 41, 234, 254
PspGI CCWGG 2 cut(s) 21, 1101
PspN4I GGNNCC 8 cut(s) 39, 51, 84, 252, 337, 747, 890, 929
PspPI GGNCC 4 cut(s) 4, 217, 424, 745
PstNI CAGNNNCTG 2 cut(s) 529, 1102
PsuI RGATCY 2 cut(s) 435, 609
PsyI GACNNNGTC 2 cut(s) 148, 422
RsaI GTAC 5 cut(s) 18, 231, 273, 569, 890
RsaNI GTAC 5 cut(s) 17, 230, 272, 568, 889
Rsr2I CGGWCCG 1 cut(s) 424
RsrII CGGWCCG 1 cut(s) 424
SapI GCTCTTC 1 cut(s) 270
SaqAI TTAA 2 cut(s) 557, 935
SatI GCNGC 3 cut(s) 530, 1050, 1064
Sau96I GGNCC 4 cut(s) 4, 217, 424, 745
SchI GAGTC 2 cut(s) 287, 413
ScrFI CCNGG 3 cut(s) 23, 788, 1103
SduI GDGCHC 1 cut(s) 788
SfaNI GCATC 2 cut(s) 147, 873
SfuI TTCGAA 1 cut(s) 441
SgrAI CRCCGGYG 1 cut(s) 836
SinI GGWCC 4 cut(s) 4, 217, 424, 745
SnaBI TACGTA 1 cut(s) 880
Sse9I AATT 5 cut(s) 536, 595, 705, 820, 873
SspMI CTAG 1 cut(s) 533
StyD4I CCNGG 3 cut(s) 21, 786, 1101
StyI CCWWGG 1 cut(s) 213
TaaI ACNGT 1 cut(s) 349
TaiI ACGT 3 cut(s) 483, 648, 882
TaqI TCGA 2 cut(s) 441, 504
TaqII GACCGA 1 cut(s) 412
TasI AATT 5 cut(s) 536, 595, 705, 820, 873
TatI WGTACW 1 cut(s) 567
TauI GCSGC 1 cut(s) 1052
TfiI GAWTC 1 cut(s) 1041
Tru1I TTAA 2 cut(s) 557, 935
Tru9I TTAA 2 cut(s) 557, 935
TseFI GTSAC 1 cut(s) 279
TseI GCWGC 2 cut(s) 529, 1063
Tsp45I GTSAC 1 cut(s) 279
TspDTI ATGAA 4 cut(s) 529, 711, 994, 1063
TspGWI ACGGA 5 cut(s) 4, 71, 217, 420, 561
Tth111I GACNNNGTC 2 cut(s) 148, 422
VpaK11BI GGWCC 4 cut(s) 4, 217, 424, 745
XapI RAATTY 2 cut(s) 536, 873
XmiI GTMKAC 2 cut(s) 181, 351
XspI CTAG 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.