pycom09g07620

Mitogen-activated protein kinase kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
5803117 .. 5803716
600 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g07620.1

Sequence Viewer

Length: 600 bp
ATGAGGCCGATTCAGCCGCCGTCCGGAACGAACCCAGCAGTGGTGGCCCCACCACCGAGGCGGGACAACCAGAGACGACGCCGTCACGACCTAACTCTACCGCTACCTCAGCGGGACACCTCGCTTGCAGTACCGCTCCCTCTCCCTCCGCCCGGTCCGAGCTCGGCCCAGTCGTCCTCGGCCCACAGCGCGGCCCAGCAGCTCATCAACTTCTCCGAGCTCGAGCGCTCTAACCGCATCGGGAGCGGAACCGGAGGCACCGTCTACAAGGCCATACACCGCCCGACGGGCCGGGTCTACGCGCTCAAGGTGATTTACGGCAACCACGATGACGCCGTGCGCCGCCAGATCTGCCGCGAGATCGAAATACTCCGCGACGTCGATAACCCCAACGTCGTCAAGTGCCACGACATGTTCGACCACAACGGCGAGATCCAGGTCCTGCTCGAGTACATGGACGGCGGGTCGCTGGAGGGCCAGCACATCAGGAACGAGAAGGCCCTCTCGGATTTGGCCAGGCAAATCCTCAGCGGCCTCGCCTATCTCCACCGGCGGAAGATCGTCCACCGGCCATCGATATCAAACCCTCGAATCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001932 GO:0001934 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006521 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009626 GO:0009791 GO:0009814 GO:0009838 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010227 GO:0010229 GO:0010364 GO:0010365 GO:0010562 GO:0010565 GO:0010604 GO:0010817 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031335 GO:0031337 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0033238 GO:0033240 GO:0033554 GO:0033674 GO:0034050 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0042762 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045764 GO:0045859 GO:0045860 GO:0045937 GO:0046885 GO:0046886 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051176 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0080090 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1900908 GO:1900910 GO:1900911 GO:1900913 GO:1901564
Pfam Domains
Protein Families

Protein Analysis

200

Amino Acids

22.23

Weight (kDa)

9.99

Isoelectric Point (pI)

65.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 75 - 190 5.7e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 75 - 190 1.6e-16 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 81
AatII GACGTC 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 257
AccBSI CCGCTC 2 cut(s) 136, 246
AccI GTMKAC 2 cut(s) 264, 297
AccII CGCG 4 cut(s) 191, 302, 357, 375
AccIII TCCGGA 1 cut(s) 23
AclWI GGATC 1 cut(s) 427
AcoI YGGCCR 2 cut(s) 513, 569
AcyI GRCGYC 3 cut(s) 79, 333, 378
AfaI GTAC 2 cut(s) 132, 452
AfeI AGCGCT 1 cut(s) 227
AfiI CCNNNNNNNGG 5 cut(s) 23, 40, 152, 190, 286
AflIII ACRYGT 1 cut(s) 411
AhdI GACNNNNNGTC 1 cut(s) 463
AjnI CCWGG 2 cut(s) 435, 515
AluBI AGCT 3 cut(s) 162, 202, 220
AluI AGCT 3 cut(s) 162, 202, 220
Alw21I GWGCWC 2 cut(s) 164, 222
Alw26I GTCTC 1 cut(s) 67
AlwI GGATC 1 cut(s) 427
AlwNI CAGNNNCTG 1 cut(s) 442
Ama87I CYCGRG 2 cut(s) 221, 446
Aor13HI TCCGGA 1 cut(s) 23
Aor51HI AGCGCT 1 cut(s) 227
ApeKI GCWGC 1 cut(s) 199
AspLEI GCGC 4 cut(s) 191, 228, 304, 342
AspS9I GGNCC 9 cut(s) 46, 155, 166, 181, 193, 289, 439, 475, 499
AsuC2I CCSGG 2 cut(s) 153, 293
AsuHPI GGTGA 1 cut(s) 322
AvaI CYCGRG 2 cut(s) 221, 446
AvaII GGWCC 2 cut(s) 155, 439
BalI TGGCCA 1 cut(s) 515
BanI GGYRCC 1 cut(s) 257
BanII GRGCYC 2 cut(s) 164, 222
Bbv12I GWGCWC 2 cut(s) 164, 222
BbvCI CCTCAGC 2 cut(s) 108, 527
BbvI GCAGC 1 cut(s) 211
BccI CCATC 1 cut(s) 580
BceAI ACGGC 6 cut(s) 4, 66, 320, 334, 442, 475
BciT130I CCWGG 2 cut(s) 437, 517
BcnI CCSGG 2 cut(s) 153, 293
BcoDI GTCTC 1 cut(s) 67
BfoI RGCGCY 1 cut(s) 229
BglI GCCNNNNNGGC 1 cut(s) 288
BglII AGATCT 1 cut(s) 348
BisI GCNGC 6 cut(s) 17, 192, 200, 343, 355, 532
BlsI GCNGC 6 cut(s) 18, 193, 201, 344, 356, 533
Bme1390I CCNGG 4 cut(s) 153, 293, 437, 517
Bme18I GGWCC 2 cut(s) 155, 439
BmeRI GACNNNNNGTC 1 cut(s) 463
BmeT110I CYCGRG 2 cut(s) 221, 446
BmgT120I GGNCC 9 cut(s) 46, 155, 166, 181, 193, 289, 439, 475, 499
BmiI GGNNCC 3 cut(s) 48, 250, 259
BmrFI CCNGG 4 cut(s) 153, 293, 437, 517
BmrI ACTGGG 1 cut(s) 163
BmsI GCATC 1 cut(s) 246
BmuI ACTGGG 1 cut(s) 163
BpmI CTGGAG 1 cut(s) 491
Bpu10I CCTNAGC 2 cut(s) 108, 527
BpuEI CTTGAG 1 cut(s) 290
BpuMI CCSGG 2 cut(s) 153, 293
Bsa29I ATCGAT 1 cut(s) 575
BsaHI GRCGYC 3 cut(s) 79, 333, 378
BsaJI CCNNGG 2 cut(s) 56, 177
BsaWI WCCGGW 2 cut(s) 23, 251
BsaXI ACNNNNNCTCC 2 cut(s) 246, 276
Bsc4I CCNNNNNNNGG 5 cut(s) 23, 40, 152, 190, 286
Bse118I RCCGGY 2 cut(s) 549, 567
Bse1I ACTGG 1 cut(s) 169
BseAI TCCGGA 1 cut(s) 23
BseBI CCWGG 2 cut(s) 437, 517
BseCI ATCGAT 1 cut(s) 575
BseDI CCNNGG 2 cut(s) 56, 177
BseLI CCNNNNNNNGG 5 cut(s) 23, 40, 152, 190, 286
BseMII CTCAG 2 cut(s) 122, 541
BseNI ACTGG 1 cut(s) 169
BseXI GCAGC 1 cut(s) 211
BseYI CCCAGC 2 cut(s) 34, 195
Bsh1236I CGCG 4 cut(s) 191, 302, 357, 375
BshNI GGYRCC 1 cut(s) 257
BshVI ATCGAT 1 cut(s) 575
BsiHKAI GWGCWC 2 cut(s) 164, 222
BsiHKCI CYCGRG 2 cut(s) 221, 446
BsiSI CCGG 6 cut(s) 24, 153, 252, 292, 550, 568
BslFI GGGAC 2 cut(s) 77, 128
BslI CCNNNNNNNGG 5 cut(s) 23, 40, 152, 190, 286
BsmAI GTCTC 1 cut(s) 67
BsmBI CGTCTC 1 cut(s) 67
BsmFI GGGAC 2 cut(s) 77, 128
BsoBI CYCGRG 2 cut(s) 221, 446
Bsp1286I GDGCHC 2 cut(s) 164, 222
Bsp13I TCCGGA 1 cut(s) 23
Bsp143I GATC 4 cut(s) 348, 360, 432, 558
BspCNI CTCAG 2 cut(s) 121, 540
BspDI ATCGAT 1 cut(s) 575
BspEI TCCGGA 1 cut(s) 23
BspFNI CGCG 4 cut(s) 191, 302, 357, 375
BspLI GGNNCC 3 cut(s) 48, 250, 259
BspPI GGATC 1 cut(s) 427
BspT107I GGYRCC 1 cut(s) 257
BsrBI CCGCTC 2 cut(s) 136, 246
BsrFI RCCGGY 2 cut(s) 549, 567
BsrI ACTGG 1 cut(s) 169
BssAI RCCGGY 2 cut(s) 549, 567
BssECI CCNNGG 2 cut(s) 56, 177
BssMI GATC 4 cut(s) 348, 360, 432, 558
BssNI GRCGYC 3 cut(s) 79, 333, 378
Bst2UI CCWGG 2 cut(s) 437, 517
Bst4CI ACNGT 1 cut(s) 262
BstACI GRCGYC 3 cut(s) 79, 333, 378
BstC8I GCNNGC 2 cut(s) 126, 479
BstDEI CTNAG 2 cut(s) 108, 527
BstFNI CGCG 4 cut(s) 191, 302, 357, 375
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 4 cut(s) 191, 228, 304, 342
BstKTI GATC 4 cut(s) 351, 363, 435, 561
BstMAI GTCTC 1 cut(s) 67
BstMBI GATC 4 cut(s) 348, 360, 432, 558
BstMWI GCNNNNNNNGC 8 cut(s) 13, 44, 109, 188, 234, 243, 288, 351
BstNI CCWGG 2 cut(s) 437, 517
BstNSI RCATGY 1 cut(s) 415
BstSCI CCNGG 4 cut(s) 151, 291, 435, 515
BstUI CGCG 4 cut(s) 191, 302, 357, 375
BstV1I GCAGC 1 cut(s) 211
BstX2I RGATCY 2 cut(s) 348, 432
BstYI RGATCY 2 cut(s) 348, 432
Bsu15I ATCGAT 1 cut(s) 575
BsuTUI ATCGAT 1 cut(s) 575
BtsI GCAGTG 1 cut(s) 45
BtsIMutI CAGTG 1 cut(s) 45
Cac8I GCNNGC 2 cut(s) 126, 479
CaiI CAGNNNCTG 1 cut(s) 442
CfoI GCGC 4 cut(s) 191, 228, 304, 342
Cfr10I RCCGGY 2 cut(s) 549, 567
Cfr13I GGNCC 9 cut(s) 46, 155, 166, 181, 193, 289, 439, 475, 499
ClaI ATCGAT 1 cut(s) 575
CpoI CGGWCCG 1 cut(s) 155
CseI GACGC 2 cut(s) 87, 341
Csp6I GTAC 2 cut(s) 131, 451
CspI CGGWCCG 1 cut(s) 155
CviAII CATG 2 cut(s) 412, 454
CviQI GTAC 2 cut(s) 131, 451
DdeI CTNAG 2 cut(s) 108, 527
DpnI GATC 4 cut(s) 350, 362, 434, 560
DpnII GATC 4 cut(s) 348, 360, 432, 558
DrdI GACNNNNNNGTC 1 cut(s) 81
DriI GACNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 81
EaeI YGGCCR 2 cut(s) 513, 569
Eam1105I GACNNNNNGTC 1 cut(s) 463
EciI GGCGGA 2 cut(s) 138, 568
Ecl136II GAGCTC 2 cut(s) 162, 220
Eco24I GRGCYC 2 cut(s) 164, 222
Eco32I GATATC 1 cut(s) 579
Eco47I GGWCC 2 cut(s) 155, 439
Eco47III AGCGCT 1 cut(s) 227
Eco53kI GAGCTC 2 cut(s) 162, 220
Eco88I CYCGRG 2 cut(s) 221, 446
EcoICRI GAGCTC 2 cut(s) 162, 220
EcoO109I RGGNCCY 2 cut(s) 439, 499
EcoRII CCWGG 2 cut(s) 435, 515
EcoRV GATATC 1 cut(s) 579
EcoT38I GRGCYC 2 cut(s) 164, 222
Esp3I CGTCTC 1 cut(s) 67
FaeI CATG 2 cut(s) 415, 457
FaiI YATR 3 cut(s) 275, 413, 455
FaqI GGGAC 2 cut(s) 77, 128
FatI CATG 2 cut(s) 411, 453
FauI CCCGC 3 cut(s) 54, 105, 455
FblI GTMKAC 2 cut(s) 264, 297
Fnu4HI GCNGC 6 cut(s) 17, 192, 200, 343, 355, 532
FriOI GRGCYC 2 cut(s) 164, 222
Fsp4HI GCNGC 6 cut(s) 17, 192, 200, 343, 355, 532
GlaI GCGC 4 cut(s) 190, 227, 303, 341
GluI GCNGC 6 cut(s) 17, 192, 200, 343, 355, 532
GsaI CCCAGC 2 cut(s) 38, 199
GsuI CTGGAG 1 cut(s) 491
HaeII RGCGCY 1 cut(s) 229
HapII CCGG 6 cut(s) 24, 153, 252, 292, 550, 568
HgaI GACGC 2 cut(s) 87, 341
HhaI GCGC 4 cut(s) 191, 228, 304, 342
Hin1I GRCGYC 3 cut(s) 79, 333, 378
Hin1II CATG 2 cut(s) 415, 457
Hin6I GCGC 4 cut(s) 189, 226, 302, 340
HinP1I GCGC 4 cut(s) 189, 226, 302, 340
HinfI GANTC 2 cut(s) 10, 591
HpaII CCGG 6 cut(s) 24, 153, 252, 292, 550, 568
HphI GGTGA 1 cut(s) 322
Hpy166II GTNNAC 3 cut(s) 265, 298, 565
Hpy188I TCNGA 3 cut(s) 159, 217, 508
Hpy188III TCNNGA 4 cut(s) 24, 86, 241, 487
Hpy8I GTNNAC 3 cut(s) 265, 298, 565
Hpy99I CGWCG 5 cut(s) 81, 289, 380, 383, 398
HpyAV CCTTC 1 cut(s) 490
HpyCH4III ACNGT 1 cut(s) 262
HpyCH4IV ACGT 2 cut(s) 378, 393
HpyCH4V TGCA 1 cut(s) 128
HpyF10VI GCNNNNNNNGC 8 cut(s) 13, 44, 109, 188, 234, 243, 288, 351
HpyF3I CTNAG 2 cut(s) 108, 527
HpySE526I ACGT 2 cut(s) 378, 393
Hsp92I GRCGYC 3 cut(s) 79, 333, 378
Hsp92II CATG 2 cut(s) 415, 457
HspAI GCGC 4 cut(s) 189, 226, 302, 340
Kpn2I TCCGGA 1 cut(s) 23
Kzo9I GATC 4 cut(s) 348, 360, 432, 558
LmnI GCTCC 2 cut(s) 141, 243
Lsp1109I GCAGC 1 cut(s) 211
LweI GCATC 1 cut(s) 246
MaeII ACGT 2 cut(s) 378, 393
MaeIII GTNAC 1 cut(s) 83
MalI GATC 4 cut(s) 350, 362, 434, 560
MbiI CCGCTC 2 cut(s) 136, 246
MboI GATC 4 cut(s) 348, 360, 432, 558
MboII GAAGA 1 cut(s) 568
MflI RGATCY 2 cut(s) 348, 432
MhlI GDGCHC 2 cut(s) 164, 222
MlsI TGGCCA 1 cut(s) 515
MluNI TGGCCA 1 cut(s) 515
Mox20I TGGCCA 1 cut(s) 515
MroI TCCGGA 1 cut(s) 23
MscI TGGCCA 1 cut(s) 515
Msp20I TGGCCA 1 cut(s) 515
MspA1I CMGCKG 2 cut(s) 112, 531
MspI CCGG 6 cut(s) 24, 153, 252, 292, 550, 568
MspR9I CCNGG 4 cut(s) 153, 293, 437, 517
MvaI CCWGG 2 cut(s) 437, 517
MvnI CGCG 4 cut(s) 191, 302, 357, 375
MwoI GCNNNNNNNGC 8 cut(s) 13, 44, 109, 188, 234, 243, 288, 351
NciI CCSGG 2 cut(s) 153, 293
NdeII GATC 4 cut(s) 348, 360, 432, 558
NlaIII CATG 2 cut(s) 415, 457
NlaIV GGNNCC 3 cut(s) 48, 250, 259
NmeAIII GCCGAG 2 cut(s) 143, 158
NmuCI GTSAC 1 cut(s) 83
NspI RCATGY 1 cut(s) 415
PaeR7I CTCGAG 2 cut(s) 221, 446
PciI ACATGT 1 cut(s) 411
PcsI WCGNNNNNNNCGW 4 cut(s) 170, 324, 333, 414
PfeI GAWTC 2 cut(s) 10, 591
PflFI GACNNNGTC 1 cut(s) 81
PkrI GCNGC 6 cut(s) 18, 193, 201, 344, 356, 533
PpuMI RGGWCCY 1 cut(s) 439
PscI ACATGT 1 cut(s) 411
Psp124BI GAGCTC 2 cut(s) 164, 222
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 2 cut(s) 435, 515
PspFI CCCAGC 2 cut(s) 34, 195
PspGI CCWGG 2 cut(s) 435, 515
PspN4I GGNNCC 3 cut(s) 48, 250, 259
PspPI GGNCC 9 cut(s) 46, 155, 166, 181, 193, 289, 439, 475, 499
PspPPI RGGWCCY 1 cut(s) 439
PspXI VCTCGAGB 2 cut(s) 221, 446
PstNI CAGNNNCTG 1 cut(s) 442
PsuI RGATCY 2 cut(s) 348, 432
PsyI GACNNNGTC 1 cut(s) 81
RsaI GTAC 2 cut(s) 132, 452
RsaNI GTAC 2 cut(s) 131, 451
Rsr2I CGGWCCG 1 cut(s) 155
RsrII CGGWCCG 1 cut(s) 155
SacI GAGCTC 2 cut(s) 164, 222
SatI GCNGC 6 cut(s) 17, 192, 200, 343, 355, 532
Sau3AI GATC 4 cut(s) 348, 360, 432, 558
Sau96I GGNCC 9 cut(s) 46, 155, 166, 181, 193, 289, 439, 475, 499
ScrFI CCNGG 4 cut(s) 153, 293, 437, 517
SduI GDGCHC 2 cut(s) 164, 222
SfaNI GCATC 1 cut(s) 246
Sfr274I CTCGAG 2 cut(s) 221, 446
SgrAI CRCCGGYG 1 cut(s) 549
SinI GGWCC 2 cut(s) 155, 439
SlaI CTCGAG 2 cut(s) 221, 446
SmlI CTYRAG 3 cut(s) 221, 305, 446
SmoI CTYRAG 3 cut(s) 221, 305, 446
SstI GAGCTC 2 cut(s) 164, 222
StyD4I CCNGG 4 cut(s) 151, 291, 435, 515
TaaI ACNGT 1 cut(s) 262
TaiI ACGT 2 cut(s) 381, 396
TaqI TCGA 7 cut(s) 222, 363, 381, 417, 447, 575, 589
TatI WGTACW 1 cut(s) 450
TauI GCSGC 5 cut(s) 19, 194, 345, 357, 534
TfiI GAWTC 2 cut(s) 10, 591
TscAI CASTG 1 cut(s) 45
TseFI GTSAC 1 cut(s) 83
TseI GCWGC 1 cut(s) 199
Tsp45I GTSAC 1 cut(s) 83
TspRI CASTG 1 cut(s) 45
Tth111I GACNNNGTC 1 cut(s) 81
VpaK11BI GGWCC 2 cut(s) 155, 439
XceI RCATGY 1 cut(s) 415
XhoI CTCGAG 2 cut(s) 221, 446
XmiI GTMKAC 2 cut(s) 264, 297
ZraI GACGTC 1 cut(s) 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.