Rh6CG474100

Mitogen-activated protein kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0001741
Physical Location & Seq
Reverse (-)
64353456 .. 64353899
444 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG474100.1

Sequence Viewer

Length: 444 bp
ATGAGTCAGATGCCGGCGCCGCCGGGAGGTGTGTCCGCCATAAAGGACTCGTCGGGGAAGTCACAGCGTCGTCCTGACCTCAGTCTACCGATGTCGAGGCGGGACACGTCTCTGGCCGTGCAGTTGCCACTGCCGCCGGGGTCGAGCTCGACTCCGTCCGGGTTCGAGGCCGTGATGATCAACTTCTCCGAACTGGAGCGGGCGAACCGGATTGGGAGAGGAGCCGGCAGCACGCTCTACAGGGTTATTCACAAGCCAACCGGGCGGCTCTACGTGATGAAAGTCATCTACGGCAACCCGACGAGTCTGTCCGGCACTAGATCTGCCGTGAGATCCAAATCCTCCGCGACGTCGATAATCCTAACGTCGTCAAGTGCCACGATATGTTTGACCACAAAGGCGAGATCCAGGTGCTGCTGGAGTTCATGGACGGTGGTTCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001932 GO:0001934 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006521 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009626 GO:0009791 GO:0009814 GO:0009838 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010227 GO:0010229 GO:0010364 GO:0010365 GO:0010562 GO:0010565 GO:0010604 GO:0010817 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031335 GO:0031337 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0033238 GO:0033240 GO:0033554 GO:0033674 GO:0034050 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0042762 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045764 GO:0045859 GO:0045860 GO:0045937 GO:0046885 GO:0046886 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051176 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0080090 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1900908 GO:1900910 GO:1900911 GO:1900913 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 ko04626 map04016 map04075 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

147

Amino Acids

15.7

Weight (kDa)

11.13

Isoelectric Point (pI)

60.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 307
AatII GACGTC 1 cut(s) 353
AccB1I GGYRCC 1 cut(s) 16
AccBSI CCGCTC 1 cut(s) 199
AccI GTMKAC 1 cut(s) 85
AccII CGCG 1 cut(s) 347
AciI CCGC 7 cut(s) 20, 36, 100, 134, 199, 265, 345
AclWI GGATC 2 cut(s) 327, 399
AcoI YGGCCR 1 cut(s) 114
AcyI GRCGYC 2 cut(s) 17, 350
AfiI CCNNNNNNNGG 1 cut(s) 26
AflIII ACRYGT 1 cut(s) 105
AjiI CACGTC 1 cut(s) 108
AjnI CCWGG 1 cut(s) 407
AluBI AGCT 1 cut(s) 147
AluI AGCT 1 cut(s) 147
Alw21I GWGCWC 1 cut(s) 149
Alw26I GTCTC 1 cut(s) 114
AlwI GGATC 2 cut(s) 327, 399
AlwNI CAGNNNCTG 1 cut(s) 414
AoxI GGCC 2 cut(s) 114, 168
ApeKI GCWGC 2 cut(s) 228, 414
AspLEI GCGC 1 cut(s) 19
AsuC2I CCSGG 4 cut(s) 24, 138, 160, 262
BanI GGYRCC 1 cut(s) 16
BanII GRGCYC 1 cut(s) 149
Bbv12I GWGCWC 1 cut(s) 149
BbvI GCAGC 2 cut(s) 240, 401
BceAI ACGGC 4 cut(s) 101, 155, 307, 311
BciT130I CCWGG 1 cut(s) 409
BclI TGATCA 1 cut(s) 177
BcnI CCSGG 4 cut(s) 24, 138, 160, 262
BcoDI GTCTC 1 cut(s) 114
BfaI CTAG 1 cut(s) 318
BfmI CTRYAG 1 cut(s) 238
BfoI RGCGCY 1 cut(s) 20
BglI GCCNNNNNGGC 1 cut(s) 262
BglII AGATCT 1 cut(s) 320
BisI GCNGC 5 cut(s) 20, 134, 229, 266, 415
BlsI GCNGC 5 cut(s) 21, 135, 230, 267, 416
Bme1390I CCNGG 5 cut(s) 24, 138, 160, 262, 409
BmgBI CACGTC 1 cut(s) 108
BmiI GGNNCC 2 cut(s) 18, 223
BmrFI CCNGG 5 cut(s) 24, 138, 160, 262, 409
BoxI GACNNNNGTC 1 cut(s) 81
BplI GAGNNNNNCTC 2 cut(s) 136, 168
BpmI CTGGAG 2 cut(s) 215, 439
BpuMI CCSGG 4 cut(s) 24, 138, 160, 262
BsaAI YACGTR 1 cut(s) 274
BsaBI GATNNNNATC 1 cut(s) 337
BsaHI GRCGYC 2 cut(s) 17, 350
BsaJI CCNNGG 1 cut(s) 137
BsaWI WCCGGW 1 cut(s) 207
Bsc4I CCNNNNNNNGG 1 cut(s) 26
Bse118I RCCGGY 2 cut(s) 13, 224
Bse1I ACTGG 1 cut(s) 198
Bse8I GATNNNNATC 1 cut(s) 337
BseBI CCWGG 1 cut(s) 409
BseDI CCNNGG 1 cut(s) 137
BseJI GATNNNNATC 1 cut(s) 337
BseLI CCNNNNNNNGG 1 cut(s) 26
BseMII CTCAG 1 cut(s) 94
BseNI ACTGG 1 cut(s) 198
BseRI GAGGAG 1 cut(s) 234
BseXI GCAGC 2 cut(s) 240, 401
BsgI GTGCAG 1 cut(s) 140
Bsh1236I CGCG 1 cut(s) 347
BshFI GGCC 2 cut(s) 116, 170
BshNI GGYRCC 1 cut(s) 16
BsiHKAI GWGCWC 1 cut(s) 149
BsiSI CCGG 8 cut(s) 14, 23, 137, 159, 208, 225, 261, 312
BslFI GGGAC 1 cut(s) 116
BslI CCNNNNNNNGG 1 cut(s) 26
BsmAI GTCTC 1 cut(s) 114
BsmBI CGTCTC 1 cut(s) 114
BsmFI GGGAC 1 cut(s) 116
BsnI GGCC 2 cut(s) 116, 170
Bsp1286I GDGCHC 1 cut(s) 149
Bsp143I GATC 4 cut(s) 177, 320, 332, 404
BspACI CCGC 7 cut(s) 20, 36, 100, 134, 199, 265, 345
BspANI GGCC 2 cut(s) 116, 170
BspCNI CTCAG 1 cut(s) 93
BspFNI CGCG 1 cut(s) 347
BspLI GGNNCC 2 cut(s) 18, 223
BspPI GGATC 2 cut(s) 327, 399
BspT107I GGYRCC 1 cut(s) 16
BsrBI CCGCTC 1 cut(s) 199
BsrFI RCCGGY 2 cut(s) 13, 224
BsrI ACTGG 1 cut(s) 198
BssAI RCCGGY 2 cut(s) 13, 224
BssECI CCNNGG 1 cut(s) 137
BssMI GATC 4 cut(s) 177, 320, 332, 404
BssNI GRCGYC 2 cut(s) 17, 350
Bst2UI CCWGG 1 cut(s) 409
Bst4CI ACNGT 1 cut(s) 433
BstACI GRCGYC 2 cut(s) 17, 350
BstBAI YACGTR 1 cut(s) 274
BstC8I GCNNGC 4 cut(s) 15, 201, 226, 233
BstDEI CTNAG 1 cut(s) 80
BstFNI CGCG 1 cut(s) 347
BstH2I RGCGCY 1 cut(s) 20
BstHHI GCGC 1 cut(s) 19
BstKTI GATC 4 cut(s) 180, 323, 335, 407
BstMAI GTCTC 1 cut(s) 114
BstMBI GATC 4 cut(s) 177, 320, 332, 404
BstMWI GCNNNNNNNGC 3 cut(s) 19, 133, 262
BstNI CCWGG 1 cut(s) 409
BstPAI GACNNNNGTC 1 cut(s) 81
BstSCI CCNGG 5 cut(s) 22, 136, 158, 260, 407
BstSFI CTRYAG 1 cut(s) 238
BstUI CGCG 1 cut(s) 347
BstV1I GCAGC 2 cut(s) 240, 401
BstX2I RGATCY 3 cut(s) 320, 332, 404
BstYI RGATCY 3 cut(s) 320, 332, 404
BsuRI GGCC 2 cut(s) 116, 170
BtrI CACGTC 1 cut(s) 108
BtsI GCAGTG 1 cut(s) 128
BtsIMutI CAGTG 1 cut(s) 128
Cac8I GCNNGC 4 cut(s) 15, 201, 226, 233
CaiI CAGNNNCTG 1 cut(s) 414
CfoI GCGC 1 cut(s) 19
Cfr10I RCCGGY 2 cut(s) 13, 224
CseI GACGC 1 cut(s) 56
CviAII CATG 1 cut(s) 426
CviJI RGCY 6 cut(s) 116, 147, 170, 224, 256, 268
CviKI_1 RGCY 6 cut(s) 116, 147, 170, 224, 256, 268
DdeI CTNAG 1 cut(s) 80
DinI GGCGCC 1 cut(s) 18
DpnI GATC 4 cut(s) 179, 322, 334, 406
DpnII GATC 4 cut(s) 177, 320, 332, 404
DrdI GACNNNNNNGTC 1 cut(s) 307
DseDI GACNNNNNNGTC 1 cut(s) 307
EaeI YGGCCR 1 cut(s) 114
EciI GGCGGA 1 cut(s) 25
Ecl136II GAGCTC 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 149
Eco53kI GAGCTC 1 cut(s) 147
EcoICRI GAGCTC 1 cut(s) 147
EcoRII CCWGG 1 cut(s) 407
EcoT38I GRGCYC 1 cut(s) 149
EgeI GGCGCC 1 cut(s) 18
EheI GGCGCC 1 cut(s) 18
Esp3I CGTCTC 1 cut(s) 114
FaeI CATG 1 cut(s) 429
FaiI YATR 3 cut(s) 41, 385, 427
FaqI GGGAC 1 cut(s) 116
FatI CATG 1 cut(s) 425
FauI CCCGC 2 cut(s) 93, 192
FbaI TGATCA 1 cut(s) 177
FblI GTMKAC 1 cut(s) 85
Fnu4HI GCNGC 5 cut(s) 20, 134, 229, 266, 415
FriOI GRGCYC 1 cut(s) 149
Fsp4HI GCNGC 5 cut(s) 20, 134, 229, 266, 415
FspBI CTAG 1 cut(s) 318
GlaI GCGC 1 cut(s) 18
GluI GCNGC 5 cut(s) 20, 134, 229, 266, 415
GsuI CTGGAG 2 cut(s) 215, 439
HaeII RGCGCY 1 cut(s) 20
HaeIII GGCC 2 cut(s) 116, 170
HapII CCGG 8 cut(s) 14, 23, 137, 159, 208, 225, 261, 312
HgaI GACGC 1 cut(s) 56
HhaI GCGC 1 cut(s) 19
Hin1I GRCGYC 2 cut(s) 17, 350
Hin1II CATG 1 cut(s) 429
Hin6I GCGC 1 cut(s) 17
HinP1I GCGC 1 cut(s) 17
HinfI GANTC 4 cut(s) 4, 47, 151, 304
HpaII CCGG 8 cut(s) 14, 23, 137, 159, 208, 225, 261, 312
Hpy166II GTNNAC 1 cut(s) 86
Hpy188I TCNGA 2 cut(s) 9, 190
Hpy188III TCNNGA 1 cut(s) 74
Hpy8I GTNNAC 1 cut(s) 86
Hpy99I CGWCG 6 cut(s) 55, 72, 304, 352, 355, 370
HpyCH4III ACNGT 1 cut(s) 433
HpyCH4IV ACGT 4 cut(s) 107, 273, 350, 365
HpyCH4V TGCA 1 cut(s) 121
HpyF10VI GCNNNNNNNGC 3 cut(s) 19, 133, 262
HpyF3I CTNAG 1 cut(s) 80
HpySE526I ACGT 4 cut(s) 107, 273, 350, 365
Hsp92I GRCGYC 2 cut(s) 17, 350
Hsp92II CATG 1 cut(s) 429
HspAI GCGC 1 cut(s) 17
KasI GGCGCC 1 cut(s) 16
KroI GCCGGC 2 cut(s) 13, 224
KroNI GCCGGC 2 cut(s) 15, 226
Ksp22I TGATCA 1 cut(s) 177
Kzo9I GATC 4 cut(s) 177, 320, 332, 404
LmnI GCTCC 2 cut(s) 196, 221
Lsp1109I GCAGC 2 cut(s) 240, 401
MaeI CTAG 1 cut(s) 318
MaeII ACGT 4 cut(s) 107, 273, 350, 365
MaeIII GTNAC 1 cut(s) 60
MalI GATC 4 cut(s) 179, 322, 334, 406
MbiI CCGCTC 1 cut(s) 199
MboI GATC 4 cut(s) 177, 320, 332, 404
MflI RGATCY 3 cut(s) 320, 332, 404
MhlI GDGCHC 1 cut(s) 149
Mly113I GGCGCC 1 cut(s) 17
MlyI GAGTC 4 cut(s) 13, 41, 145, 313
MnlI CCTC 6 cut(s) 20, 89, 90, 160, 212, 352
MroNI GCCGGC 2 cut(s) 13, 224
MspI CCGG 8 cut(s) 14, 23, 137, 159, 208, 225, 261, 312
MspR9I CCNGG 5 cut(s) 24, 138, 160, 262, 409
MvaI CCWGG 1 cut(s) 409
MvnI CGCG 1 cut(s) 347
MwoI GCNNNNNNNGC 3 cut(s) 19, 133, 262
NaeI GCCGGC 2 cut(s) 15, 226
NarI GGCGCC 1 cut(s) 17
NciI CCSGG 4 cut(s) 24, 138, 160, 262
NdeII GATC 4 cut(s) 177, 320, 332, 404
NgoMIV GCCGGC 2 cut(s) 13, 224
NlaIII CATG 1 cut(s) 429
NlaIV GGNNCC 2 cut(s) 18, 223
NmuCI GTSAC 1 cut(s) 60
PdiI GCCGGC 2 cut(s) 15, 226
PflFI GACNNNGTC 1 cut(s) 154
PkrI GCNGC 5 cut(s) 21, 135, 230, 267, 416
PleI GAGTC 4 cut(s) 12, 41, 145, 312
PluTI GGCGCC 1 cut(s) 20
PpsI GAGTC 4 cut(s) 12, 41, 145, 312
Ppu21I YACGTR 1 cut(s) 274
PshAI GACNNNNGTC 1 cut(s) 81
Psp124BI GAGCTC 1 cut(s) 149
Psp6I CCWGG 1 cut(s) 407
PspGI CCWGG 1 cut(s) 407
PspN4I GGNNCC 2 cut(s) 18, 223
PstNI CAGNNNCTG 1 cut(s) 414
PsuI RGATCY 3 cut(s) 320, 332, 404
PsyI GACNNNGTC 1 cut(s) 154
SacI GAGCTC 1 cut(s) 149
SatI GCNGC 5 cut(s) 20, 134, 229, 266, 415
Sau3AI GATC 4 cut(s) 177, 320, 332, 404
SchI GAGTC 4 cut(s) 13, 41, 145, 313
ScrFI CCNGG 5 cut(s) 24, 138, 160, 262, 409
SduI GDGCHC 1 cut(s) 149
SetI ASST 8 cut(s) 31, 81, 110, 149, 276, 353, 368, 413
SfcI CTRYAG 1 cut(s) 238
SfoI GGCGCC 1 cut(s) 18
SsiI CCGC 7 cut(s) 20, 36, 100, 134, 199, 265, 345
SspDI GGCGCC 1 cut(s) 16
SspMI CTAG 1 cut(s) 318
SstI GAGCTC 1 cut(s) 149
StyD4I CCNGG 5 cut(s) 22, 136, 158, 260, 407
TaaI ACNGT 1 cut(s) 433
TaiI ACGT 4 cut(s) 110, 276, 353, 368
TaqI TCGA 5 cut(s) 95, 143, 149, 165, 353
TauI GCSGC 3 cut(s) 22, 136, 268
TscAI CASTG 1 cut(s) 135
TseFI GTSAC 1 cut(s) 60
TseI GCWGC 2 cut(s) 228, 414
Tsp45I GTSAC 1 cut(s) 60
TspDTI ATGAA 2 cut(s) 293, 414
TspGWI ACGGA 1 cut(s) 144
TspRI CASTG 1 cut(s) 135
Tth111I GACNNNGTC 1 cut(s) 154
XmiI GTMKAC 1 cut(s) 85
XspI CTAG 1 cut(s) 318
ZraI GACGTC 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.