MD14G1059700.v1.1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0001228
Physical Location & Seq
Forward (+)
6318746 .. 6320520
1775 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1059700.v1.1.491

Sequence Viewer

Length: 1728 bp
ATGATGACCCATTTGCACAAACTCAGAACAGCATCTATTCTCAAATGGGTTTCTTCAAATTTTGATAAAAACCACTTTAGATCGACAAGAACCCCAATTCACCCAATTGGGTATTTCCCCATTGTCCAAAACCCTAGGTTTTACACAACTAAAAGGGATTCTGTGACTCAAAGTTGTGAAAAAGGGGATACTACTTCGACTGCCATTGCTAATGGCAAAAGTGATGCTCAAATTTCTCGTGCTATTAGAAAAGAAGCGGAAAATGCATTGTTCGATTATTTGTATTTTACTAGATACTTACAGTTTGCAGATGCAGAGAACATGAGTAAAAACTCCCCACATTTTCTCAGGAAGCTTGTAAAATGTGCTGGTAATGAAAAGGGATATGGGGGTTCAATTGCTCGTTTCTTGCGTTACCACCCTATTAATGAATTCGAACCTTTCCTTGAGAGCTTGGGGTTGAAACCTTCCGAGTATAGTCCTCTTCTTCCTCGCAATTTGATGTTCTTGATCGACGATGGTTTGTTGCTTCATAATTATGCTGTTTTGTGTAATTATGGGGTTGCTCGTAATAAGATAGGAAAGATTTATAGGGAAGCTACTGAAATCTTTCAATACCGTGTTGGGGTGTTACGATCAAAGCTTGAAGCTTATGAAGAACTAGGTCTCAGCCAGTCTGATTTGATTAAGCTTGTTGTTGCTAGTCCTAATCTTTTAAGTGGGGTCGTCAATGCCATGTTGTTCAAGGTGTTGGAAAAACTGAAGTCTGTTGGATTTGAAACCAGTTGGATTATAGGGAACTTATCGGAAGAAAATTCTTATAATTGGAGCCGGTTGCTTGAAGCTCTAAGTTTTCTGAGTAAGATGGTTTGCAGCGACAAACAGTTGGGTGAATTAATTGGCCAACACCCACATATTTTATTTGAGGGCTCAGGGGAAAAGATGTTTTCAGTTATTGGGTTCTTACTGAAATTTGGATCCACAAAAAGCCAGCTATGCTCAATATTTCTGCAATTTCCACAGATTCCAGTTGTGAAATTTGTTTCAAATTTGAGACAATGCATTTTGTTCCTGAATGAGATTGACATGAAGGTTGCAGAGATTGGAAAGTTGATTCGTTTTCACCCCTTGCTACTGGGTTCATGTGCTTTGAAGAAAACGAACACCTTACTTCTTCACTTGAAAGTTGGAAAGAAGAGCCTGTGTAGATACATACAGGAGAACCCTCAAGAATTGAAGAATTGGGTTTTAGGTAAAAGACTTAGGCCATTAGAGAACCGATTTGTAGAGAACTCAAACAAAATGAAAGTAGCGCAAAAGGCATTTCAAGGCAATGCATGGGAGTTTCAGGAAAGATTTGATTGTATTGTGGAAGCTGGTTTGGATCGCGAGGCTGTCTGCAAAATGATTAAAGCGTACCCTCTAATTCTTAGCCAGTCAAAGGCTGTTATTGAAATGAAGATTGATTTTCTTGTAAATCATTTGCGTTATCCGTTATCAACTGTGCTGACCTTCCCAAGATTTCTTACATATGGAATTAAAAGGGTCAAGCGTAGGGTGTTTATGTACAATTGGCTCAAAGATCAAGGAACGGCAGATCCTAGGTATGCTTTGAGCACTGTTGTTTCGTGTTCAGATGCATGTTTTATAAGGAAGTATGTAAATTGCCATCCTAATGGTCCTGAAGTGTGGGAGGATTTGAAGAATAAAATTCATTTGGAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

576

Amino Acids

66.01

Weight (kDa)

9.43

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 283 - 423 2.8e-12 mTERF
mTERF PF02536 450 - 549 7.3e-16 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 822, 1649
AccII CGCG 1 cut(s) 1389
AciI CCGC 1 cut(s) 257
AclWI GGATC 4 cut(s) 972, 985, 1392, 1592
AcoI YGGCCR 1 cut(s) 901
AcsI RAATTY 8 cut(s) 58, 231, 431, 814, 971, 1037, 1048, 1710
AcuI CTGAAG 2 cut(s) 782, 1704
AfaI GTAC 2 cut(s) 1418, 1568
AfiI CCNNNNNNNGG 2 cut(s) 625, 1441
AloI GAACNNNNNNTCC 2 cut(s) 1582, 1614
AluBI AGCT 9 cut(s) 355, 453, 599, 643, 650, 691, 845, 994, 1376
AluI AGCT 9 cut(s) 355, 453, 599, 643, 650, 691, 845, 994, 1376
Alw21I GWGCWC 1 cut(s) 1619
Alw26I GTCTC 2 cut(s) 671, 1048
AlwI GGATC 4 cut(s) 972, 985, 1392, 1592
AoxI GGCC 2 cut(s) 901, 1265
ApeKI GCWGC 1 cut(s) 873
ApoI RAATTY 8 cut(s) 58, 231, 431, 814, 971, 1037, 1048, 1710
AseI ATTAAT 2 cut(s) 426, 896
Asp700I GAANNNNTTC 1 cut(s) 609
AspA2I CCTAGG 2 cut(s) 134, 1601
AspLEI GCGC 1 cut(s) 1315
AspS9I GGNCC 1 cut(s) 1679
AsuHPI GGTGA 3 cut(s) 92, 902, 1115
AsuII TTCGAA 1 cut(s) 435
AvaII GGWCC 1 cut(s) 1679
AvrII CCTAGG 2 cut(s) 134, 1601
BalI TGGCCA 1 cut(s) 903
BamHI GGATCC 1 cut(s) 977
BanII GRGCYC 1 cut(s) 932
BauI CACGAG 1 cut(s) 237
Bbv12I GWGCWC 1 cut(s) 1619
BbvI GCAGC 1 cut(s) 885
BccI CCATC 3 cut(s) 512, 859, 1677
BceAI ACGGC 1 cut(s) 1608
BciVI GTATCC 1 cut(s) 181
BcoDI GTCTC 2 cut(s) 671, 1048
BfaI CTAG 5 cut(s) 135, 291, 662, 702, 1602
BfuI GTATCC 1 cut(s) 181
BisI GCNGC 1 cut(s) 874
BlnI CCTAGG 2 cut(s) 134, 1601
BlsI GCNGC 1 cut(s) 875
Bme18I GGWCC 1 cut(s) 1679
BmgT120I GGNCC 1 cut(s) 1679
BmiI GGNNCC 2 cut(s) 830, 979
BmrI ACTGGG 1 cut(s) 1145
BmsI GCATC 4 cut(s) 41, 214, 301, 1627
BmuI ACTGGG 1 cut(s) 1145
Bpu10I CCTNAGC 1 cut(s) 931
Bpu14I TTCGAA 1 cut(s) 435
BpuEI CTTGAG 2 cut(s) 467, 1212
BsaI GGTCTC 1 cut(s) 671
BsaJI CCNNGG 2 cut(s) 134, 1601
Bsc4I CCNNNNNNNGG 2 cut(s) 625, 1441
Bse118I RCCGGY 1 cut(s) 831
Bse1I ACTGG 5 cut(s) 673, 783, 1028, 1140, 1435
Bse3DI GCAATG 2 cut(s) 204, 1339
BseDI CCNNGG 2 cut(s) 134, 1601
BseGI GGATG 1 cut(s) 1669
BseLI CCNNNNNNNGG 2 cut(s) 625, 1441
BseMI GCAATG 2 cut(s) 204, 1339
BseMII CTCAG 5 cut(s) 37, 361, 682, 848, 945
BseNI ACTGG 5 cut(s) 673, 783, 1028, 1140, 1435
BseXI GCAGC 1 cut(s) 885
Bsh1236I CGCG 1 cut(s) 1389
BshFI GGCC 2 cut(s) 903, 1267
BsiHKAI GWGCWC 1 cut(s) 1619
BsiSI CCGG 1 cut(s) 832
BslI CCNNNNNNNGG 2 cut(s) 625, 1441
BsmAI GTCTC 2 cut(s) 671, 1048
BsnI GGCC 2 cut(s) 903, 1267
Bso31I GGTCTC 1 cut(s) 671
Bsp119I TTCGAA 1 cut(s) 435
Bsp1286I GDGCHC 2 cut(s) 932, 1619
Bsp1407I TGTACA 1 cut(s) 1566
Bsp143I GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
Bsp68I TCGCGA 1 cut(s) 1389
BspACI CCGC 1 cut(s) 257
BspANI GGCC 2 cut(s) 903, 1267
BspCNI CTCAG 5 cut(s) 36, 360, 681, 849, 944
BspFNI CGCG 1 cut(s) 1389
BspLI GGNNCC 2 cut(s) 830, 979
BspPI GGATC 4 cut(s) 972, 985, 1392, 1592
BspQI GCTCTTC 1 cut(s) 1190
BspT104I TTCGAA 1 cut(s) 435
BspTNI GGTCTC 1 cut(s) 671
BsrDI GCAATG 2 cut(s) 204, 1339
BsrFI RCCGGY 1 cut(s) 831
BsrGI TGTACA 1 cut(s) 1566
BsrI ACTGG 5 cut(s) 673, 783, 1028, 1140, 1435
BssAI RCCGGY 1 cut(s) 831
BssECI CCNNGG 2 cut(s) 134, 1601
BssMI GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
BssSI CACGAG 1 cut(s) 237
BssT1I CCWWGG 2 cut(s) 134, 1601
Bst2BI CACGAG 1 cut(s) 237
Bst4CI ACNGT 5 cut(s) 303, 620, 885, 1504, 1621
Bst6I CTCTTC 2 cut(s) 489, 1190
BstAUI TGTACA 1 cut(s) 1566
BstBI TTCGAA 1 cut(s) 435
BstC8I GCNNGC 1 cut(s) 992
BstDEI CTNAG 8 cut(s) 23, 347, 668, 848, 857, 931, 1262, 1430
BstF5I GGATG 1 cut(s) 1669
BstFNI CGCG 1 cut(s) 1389
BstHHI GCGC 1 cut(s) 1315
BstKTI GATC 7 cut(s) 83, 513, 638, 980, 1387, 1585, 1600
BstMAI GTCTC 2 cut(s) 671, 1048
BstMBI GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
BstMWI GCNNNNNNNGC 3 cut(s) 263, 996, 1319
BstNSI RCATGY 1 cut(s) 1644
BstUI CGCG 1 cut(s) 1389
BstV1I GCAGC 1 cut(s) 885
BstX2I RGATCY 2 cut(s) 977, 1597
BstXI CCANNNNNNTGG 1 cut(s) 1676
BstYI RGATCY 2 cut(s) 977, 1597
BsuI GTATCC 1 cut(s) 181
BsuRI GGCC 2 cut(s) 903, 1267
BtsCI GGATG 1 cut(s) 1669
BtsIMutI CAGTG 1 cut(s) 1617
BtuMI TCGCGA 1 cut(s) 1389
Cac8I GCNNGC 1 cut(s) 992
CfoI GCGC 1 cut(s) 1315
Cfr10I RCCGGY 1 cut(s) 831
Cfr13I GGNCC 1 cut(s) 1679
Csp6I GTAC 2 cut(s) 1417, 1567
CviAII CATG 6 cut(s) 322, 736, 1087, 1143, 1338, 1641
CviQI GTAC 2 cut(s) 1417, 1567
DdeI CTNAG 8 cut(s) 23, 347, 668, 848, 857, 931, 1262, 1430
DpnI GATC 7 cut(s) 82, 512, 637, 979, 1386, 1584, 1599
DpnII GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
EaeI YGGCCR 1 cut(s) 901
Eam1104I CTCTTC 2 cut(s) 489, 1190
EarI CTCTTC 2 cut(s) 489, 1190
Eco130I CCWWGG 2 cut(s) 134, 1601
Eco24I GRGCYC 1 cut(s) 932
Eco31I GGTCTC 1 cut(s) 671
Eco47I GGWCC 1 cut(s) 1679
Eco57I CTGAAG 2 cut(s) 782, 1704
EcoRI GAATTC 1 cut(s) 431
EcoT14I CCWWGG 2 cut(s) 134, 1601
EcoT22I ATGCAT 4 cut(s) 268, 1064, 1339, 1642
EcoT38I GRGCYC 1 cut(s) 932
ErhI CCWWGG 2 cut(s) 134, 1601
FaeI CATG 6 cut(s) 325, 739, 1090, 1146, 1341, 1644
FatI CATG 6 cut(s) 321, 735, 1086, 1142, 1337, 1640
FauNDI CATATG 1 cut(s) 1531
Fnu4HI GCNGC 1 cut(s) 874
FokI GGATG 1 cut(s) 1656
FriOI GRGCYC 1 cut(s) 932
Fsp4HI GCNGC 1 cut(s) 874
FspBI CTAG 5 cut(s) 135, 291, 662, 702, 1602
GlaI GCGC 1 cut(s) 1314
GluI GCNGC 1 cut(s) 874
HaeIII GGCC 2 cut(s) 903, 1267
HapII CCGG 1 cut(s) 832
HhaI GCGC 1 cut(s) 1315
Hin1II CATG 6 cut(s) 325, 739, 1090, 1146, 1341, 1644
Hin6I GCGC 1 cut(s) 1313
HinP1I GCGC 1 cut(s) 1313
HindIII AAGCTT 4 cut(s) 353, 641, 648, 689
HinfI GANTC 4 cut(s) 158, 166, 1024, 1114
HpaII CCGG 1 cut(s) 832
HphI GGTGA 3 cut(s) 92, 902, 1115
Hpy188I TCNGA 6 cut(s) 26, 472, 679, 808, 858, 1636
Hpy188III TCNNGA 7 cut(s) 349, 508, 1072, 1229, 1349, 1388, 1682
Hpy99I CGWCG 1 cut(s) 518
HpyAV CCTTC 3 cut(s) 477, 1084, 1522
HpyCH4III ACNGT 5 cut(s) 303, 620, 885, 1504, 1621
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 996, 1319
HpyF3I CTNAG 8 cut(s) 23, 347, 668, 848, 857, 931, 1262, 1430
Hsp92II CATG 6 cut(s) 325, 739, 1090, 1146, 1341, 1644
HspAI GCGC 1 cut(s) 1313
Kzo9I GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
LguI GCTCTTC 1 cut(s) 1190
LmnI GCTCC 2 cut(s) 828, 1720
Lsp1109I GCAGC 1 cut(s) 885
LweI GCATC 4 cut(s) 41, 214, 301, 1627
MaeI CTAG 5 cut(s) 135, 291, 662, 702, 1602
MaeIII GTNAC 3 cut(s) 163, 413, 630
MalI GATC 7 cut(s) 82, 512, 637, 979, 1386, 1584, 1599
MboI GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
MfeI CAATTG 3 cut(s) 105, 396, 1570
MflI RGATCY 2 cut(s) 977, 1597
MhlI GDGCHC 2 cut(s) 932, 1619
MlsI TGGCCA 1 cut(s) 903
MluNI TGGCCA 1 cut(s) 903
MlyI GAGTC 1 cut(s) 160
MmeI TCCRAC 4 cut(s) 732, 751, 767, 1168
MnlI CCTC 7 cut(s) 492, 501, 919, 1236, 1384, 1431, 1687
Mox20I TGGCCA 1 cut(s) 903
Mph1103I ATGCAT 4 cut(s) 268, 1064, 1339, 1642
MroXI GAANNNNTTC 1 cut(s) 609
MscI TGGCCA 1 cut(s) 903
MseI TTAA 6 cut(s) 426, 687, 716, 896, 1410, 1539
MslI CAYNNNNRTG 2 cut(s) 537, 1674
Msp20I TGGCCA 1 cut(s) 903
MspI CCGG 1 cut(s) 832
MunI CAATTG 3 cut(s) 105, 396, 1570
MvnI CGCG 1 cut(s) 1389
MwoI GCNNNNNNNGC 3 cut(s) 263, 996, 1319
NdeI CATATG 1 cut(s) 1531
NdeII GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
NlaIII CATG 6 cut(s) 325, 739, 1090, 1146, 1341, 1644
NlaIV GGNNCC 2 cut(s) 830, 979
NmuCI GTSAC 1 cut(s) 163
NruI TCGCGA 1 cut(s) 1389
NsiI ATGCAT 4 cut(s) 268, 1064, 1339, 1642
NspI RCATGY 1 cut(s) 1644
NspV TTCGAA 1 cut(s) 435
PciSI GCTCTTC 1 cut(s) 1190
PcsI WCGNNNNNNNCGW 1 cut(s) 409
PdmI GAANNNNTTC 1 cut(s) 609
PfeI GAWTC 3 cut(s) 158, 1024, 1114
PkrI GCNGC 1 cut(s) 875
PleI GAGTC 1 cut(s) 160
PpsI GAGTC 1 cut(s) 160
PshBI ATTAAT 2 cut(s) 426, 896
PsiI TTATAA 2 cut(s) 822, 1649
PspN4I GGNNCC 2 cut(s) 830, 979
PspPI GGNCC 1 cut(s) 1679
PsuI RGATCY 2 cut(s) 977, 1597
RruI TCGCGA 1 cut(s) 1389
RsaI GTAC 2 cut(s) 1418, 1568
RsaNI GTAC 2 cut(s) 1417, 1567
RseI CAYNNNNRTG 2 cut(s) 537, 1674
SapI GCTCTTC 1 cut(s) 1190
SaqAI TTAA 6 cut(s) 426, 687, 716, 896, 1410, 1539
SatI GCNGC 1 cut(s) 874
Sau3AI GATC 7 cut(s) 80, 510, 635, 977, 1384, 1582, 1597
Sau96I GGNCC 1 cut(s) 1679
SchI GAGTC 1 cut(s) 160
SduI GDGCHC 2 cut(s) 932, 1619
SfaNI GCATC 4 cut(s) 41, 214, 301, 1627
SfuI TTCGAA 1 cut(s) 435
SinI GGWCC 1 cut(s) 1679
SmiMI CAYNNNNRTG 2 cut(s) 537, 1674
SmlI CTYRAG 2 cut(s) 446, 1227
SmoI CTYRAG 2 cut(s) 446, 1227
SsiI CCGC 1 cut(s) 257
SspI AATATT 1 cut(s) 1005
SspMI CTAG 5 cut(s) 135, 291, 662, 702, 1602
StyI CCWWGG 2 cut(s) 134, 1601
TaaI ACNGT 5 cut(s) 303, 620, 885, 1504, 1621
TaqI TCGA 5 cut(s) 83, 197, 273, 435, 513
TatI WGTACW 1 cut(s) 1566
TfiI GAWTC 3 cut(s) 158, 1024, 1114
Tru1I TTAA 6 cut(s) 426, 687, 716, 896, 1410, 1539
Tru9I TTAA 6 cut(s) 426, 687, 716, 896, 1410, 1539
TscAI CASTG 1 cut(s) 1624
TseFI GTSAC 1 cut(s) 163
TseI GCWGC 1 cut(s) 873
Tsp45I GTSAC 1 cut(s) 163
TspDTI ATGAA 9 cut(s) 390, 444, 521, 669, 1103, 1131, 1319, 1472, 1703
TspGWI ACGGA 1 cut(s) 1482
TspRI CASTG 1 cut(s) 1624
VpaK11BI GGWCC 1 cut(s) 1679
VspI ATTAAT 2 cut(s) 426, 896
XapI RAATTY 8 cut(s) 58, 231, 431, 814, 971, 1037, 1048, 1710
XceI RCATGY 1 cut(s) 1644
XmaJI CCTAGG 2 cut(s) 134, 1601
XmnI GAANNNNTTC 1 cut(s) 609
XspI CTAG 5 cut(s) 135, 291, 662, 702, 1602
Zsp2I ATGCAT 4 cut(s) 268, 1064, 1339, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.