Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001727

Physical Location & Seq

Genomic Coordinates Reverse (-)

1927433 .. 1931453

Gene Structure 4021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1031800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGGCAAAGAGATCGGATTTTGCGCAGAAGCTGCTGGACGATCTTCGCGTCCGCAAGGAGAAAATGGGTGCGCCTCAGAGTTCAAACCGTTGGACTTCAATGGCAGTAGATGCATATGCTTGTTCCGAGCAGAATCATAGAGGAAGAGCGGATGTAAGCACCAATGGACCGATTGGCTCCGGAGGAAGTAGCAGAACACCGATTGTTCAAGAGGGTTCGAATCAGATTGTTGCTTACGGGAGAGGAGGTAGGAGCTCAGAACCAATGGGAGATTTTTCCGTGGCATTGGCTTTTGCACTTGAAAATGGAGGAAAGCTCGGGAAAGCGGATACATCTAGCAGAAGTCCAATGCTAGGATTTTTGAATCAAATTGGGAGGGGAGCCGTGGAGTTCAGCGAGATGGAAGGAAAAGGTAGCGTCAATAGGCACTTCGGTTCAAGTAACCATTTTCCTAACCTTTCTCATCACCATATCGAAGAAATATCGAGAGGAGCACATAAATTGAATCAGATCCTAGAGGCCTGCTCGAATGGACTTAATGTTGATAGATTTTCAATAGAAGTTGGGAAGGAGTTAGTGAAAGAGGCAATGGATTTGGAAGAGTCCTTGAGAATGCTTGTAAACCTGCAGGAAACTTCTGGTTACATAGTCAGCTCTCAGAGGAAAAATCAGATCACATTGCTAGATGAGGAAGATAATGCTGTCAAAATGGCTGAGGAAAAGCAAATTGATCTGCCAAACTTCTCCTTTGACAAGGGTTCGAGACACGCGCGTAAAAATCAAGAAGTTGGAAGGCCCGGGTTCGAGCAGAAGGTGACTGCAGCTCTAACCTACACTACAGAAGGTAGTGGCTTAAACCGCGAAAAGCAAGGGAAAATAACCTCCTCAACATCAGTTTCTCAGAGGCAATCAGTCAGCTATACCGGAGGTGTCAAGAATCCATCAACAGAACAGAAAGAGTCTAAACCAGAAAAGGAGAGGATTCCAATTGTAATTGCAAAACTAATGGGGCTGAATGAGCTTCCAAAAAACGAAAACTTGAAGCACACCGCGGAGGAAGACTTGAGTTCCAAGTCAAAAAGAGAAAGGCACGTGATAGAGCAAACAACAAATGAAAGCAGTAAGATTTCTGGGGTTAAGACTAAGGATCCTTTGATGCAGAATATGACGTTTGTTTCGCAAGCAGAGAAAAGAATGCTTGCCAATAATATCAGCATTGGGGTAGTTGTTCATGATCCGGAAGAATTTAAACCCGTGGCAATATTAGGAAATGCAACCATCAAATCAGATAAGCACCAAAAACCTAGTCAGACCTTCAAACAGGATAAACCTGTGATGCAAGCAAAACCAGGGTTCAAGGAAATTCGGGTTCCAGTGGAAAAGCAAAATGGGAACAACGTTCTCCCAAGAAATCAGCAGCATAAGCCCCCATACGATGTTGAACTCCAGCAGCAATCCATGGCTTTGAAATCTGAGTCACCGAAAGAAAAGCGCAGACAGGAGACGAAGGAGCGGCAAATTCCACAACCAAAGTTGGTGGCGAAGAAACAACGAAGAAGTGAAATGATATCAAGAAGAAAGTCAAAAGGGGCAGTAGATTTGCAAAAGAAGCAGACACTTGCAGAGCAAACTTGGGTAAATAAGAAAATCGCTAGAGAAGCCGCTGCAACAGTGCAATCCACAAGAGTTCCAAATGGCAAATATCATGAAAATCTGGTCAGAAGCAAAAGTTCCGCTGACTTGAATTTCAACAAGAAAGATTTTTCACCAAACTCCTTGGATCCTCAACAAGCAAAAGAAAATTTTGGCACTCTACCGGCTATGGAGGAGAGATCAGTTCATGCAGCACCACCACTGCAGAAGGCAAAATCTAGAAGAGTGAATAAAAGCGAAATGCCTCAAAGAATCGATGAAGTGGCAACCAGACGAAGCTATGAAAAACGTGGTAGTCACAATGCAACAGAAAAAGTTAGAGCCAGCAGGCTAAAACAAGCTGAGCCACACATCGTCAAGTCCAACAAATCAACAGCAAGCGTTCAACCACTAGATTCAGGGCAAAACCAACATAAAGAAGCAGAGCTGGAGGCTCCCACTTTGTATGATCCCAATGAAGTTGAAAGTCGAAGACTCGAAAAATCACAAACTCTACTTCCAAAGGAAAGTTATGATCAACAAGATCAAGCACCTGCTTTCGGAGATGATGAGTGCATAACTGCATCAATTACAGTTAATGGAAACCGTGACATTTGTTATGCAGAAGTATTGGAGCACCATAAAGCACTCAACCTGAGAAAACAAGAGCCGACAGAAATTGAAAACCACCTGAAGCAGGTAGTGATCAAGAGCCATCATTTCCTCAACACAGCAGAAGCACTTTTCAAGCTCGACATCCCTTTCAGCATTCTTCACGACAGCGGCCGCGACTGCAACCCAGATGTAGACAGCAAGCTCACATTAGACTGTGCCTACGAAGTAATGAAACGAAAAGGGATAAGGCACGAGCTCAATGTTCATCCTAAATGCGAGAAGGCATCAATAAGTTTTGTCAAAATACGGTCCTTGAATGAGCTGGTTAGGCAACTGCATAAAGATTTCGAGACTCTGAAGTTCTACGGGAGAAAAGGAAAATATGAATGTGAGGCGGAAGCGTATCTGCCCAAAATGCTGGAAAGCGATATGCATAGCTGGGAGCCGGAACTGAATTGCATGTGGGATATGGGTTGGGATAAAACTATGTTTGCAGTTGTTGAAGTAGATGAAGTTGTGAAAGATTTGGAGAGGCTTGTGCTCGGTGGACTTGTAGATGAGCTTACCAGAGACCTCTTTCGCACGGGTTTTTCAGCGATACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VARLMGL

Protein Analysis

951

Amino Acids

106.95

Weight (kDa)

9.0

Isoelectric Point (pI)

53.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001727)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42710 AT5G42710 AT5G42710
fragaria_vesca	FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870
malus_domestica	MD08G1035200.v1.1 MD15G1031800.v1.1
prunus_persica	Prupe.1G380200_v2.0.a1
pyrus_communis	pycom08g02780 pycom15g02750
rosa_chinensis	RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941
rosa_laevigata	RLG00000011289 RLG00000034832 RLG00000034833
rosa_multiflora	Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003
rosa_roxburghii	Rroxscaffold_1G00028100 Rroxscaffold_7G00167300
rosa_rugosa	Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700
rosa_samantha	Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300
rosa_wichuraiana	Rw5G032650 Rw5G032690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2194
Acc16I	TGCGCA	1 cut(s)	24
Acc36I	ACCTGC	3 cut(s)	633, 2194, 2320
AccBSI	CCGCTC	2 cut(s)	149, 1513
AccI	GTMKAC	1 cut(s)	2439
AccII	CGCG	6 cut(s)	48, 770, 772, 861, 1052, 2421
AccIII	TCCGGA	2 cut(s)	179, 1237
AclI	AACGTT	1 cut(s)	1398
AclWI	GGATC	7 cut(s)	505, 1142, 1155, 1229, 1775, 1788, 2096
AcoI	YGGCCR	1 cut(s)	2416
AcsI	RAATTY	5 cut(s)	1244, 1362, 1518, 1744, 1801
AcuI	CTGAAG	2 cut(s)	2345, 2624
AcvI	CACGTG	1 cut(s)	1093
AfiI	CCNNNNNNNGG	3 cut(s)	353, 2192, 2329
AjnI	CCWGG	1 cut(s)	1348
Alw21I	GWGCWC	5 cut(s)	257, 496, 2271, 2505, 2790
Alw26I	GTCTC	4 cut(s)	757, 1496, 2591, 2811
AlwI	GGATC	7 cut(s)	505, 1142, 1155, 1229, 1775, 1788, 2096
AlwNI	CAGNNNCTG	1 cut(s)	31
Ama87I	CYCGRG	2 cut(s)	317, 797
Aor13HI	TCCGGA	2 cut(s)	179, 1237
AoxI	GGCC	3 cut(s)	519, 794, 2416
ApeKI	GCWGC	6 cut(s)	31, 821, 1417, 1450, 1664, 1844
ApoI	RAATTY	5 cut(s)	1244, 1362, 1518, 1744, 1801
ArsI	GACNNNNNNTTYG	4 cut(s)	1159, 1191, 1291, 1323
AspLEI	GCGC	4 cut(s)	25, 73, 772, 1494
AspS9I	GGNCC	3 cut(s)	167, 795, 2556
AsuC2I	CCSGG	2 cut(s)	798, 799
AsuHPI	GGTGA	4 cut(s)	458, 826, 1470, 1758
AsuII	TTCGAA	1 cut(s)	218
AvaI	CYCGRG	2 cut(s)	317, 797
AvaII	GGWCC	2 cut(s)	167, 2556
BamHI	GGATCC	2 cut(s)	1147, 1780
BanII	GRGCYC	2 cut(s)	257, 2505
BauI	CACGAG	1 cut(s)	2498
BbrPI	CACGTG	1 cut(s)	1093
BbsI	GAAGAC	2 cut(s)	1065, 2131
Bbv12I	GWGCWC	5 cut(s)	257, 496, 2271, 2505, 2790
BbvCI	CCTCAGC	1 cut(s)	714
BbvI	GCAGC	6 cut(s)	18, 833, 1429, 1462, 1651, 1856
BccI	CCATC	4 cut(s)	394, 949, 1286, 2355
BceAI	ACGGC	1 cut(s)	368
BcgI	CGANNNNNNTGC	1 cut(s)	28
BciT130I	CCWGG	1 cut(s)	1350
BciVI	GTATCC	1 cut(s)	322
BclI	TGATCA	2 cut(s)	2167, 2337
BcnI	CCSGG	2 cut(s)	798, 799
BcoDI	GTCTC	4 cut(s)	757, 1496, 2591, 2811
BfaI	CTAG	8 cut(s)	336, 353, 515, 683, 1305, 1653, 1872, 2045
BfmI	CTRYAG	4 cut(s)	626, 819, 837, 1856
BfuAI	ACCTGC	3 cut(s)	633, 2194, 2320
BfuI	GTATCC	1 cut(s)	322
BlpI	GCTNAGC	1 cut(s)	1995
Bme1390I	CCNGG	3 cut(s)	798, 799, 1350
Bme18I	GGWCC	2 cut(s)	167, 2556
BmeT110I	CYCGRG	2 cut(s)	317, 797
BmgT120I	GGNCC	3 cut(s)	167, 795, 2556
BmiI	GGNNCC	7 cut(s)	178, 382, 1149, 1371, 1782, 2088, 2691
BmrFI	CCNGG	3 cut(s)	798, 799, 1350
BmsI	GCATC	5 cut(s)	100, 1146, 1326, 2225, 2540
BpiI	GAAGAC	2 cut(s)	1065, 2131
BplI	GAGNNNNNCTC	4 cut(s)	300, 332, 509, 541
BpmI	CTGGAG	2 cut(s)	1430, 2102
Bpu10I	CCTNAGC	1 cut(s)	714
Bpu1102I	GCTNAGC	1 cut(s)	1995
Bpu14I	TTCGAA	1 cut(s)	218
BpuEI	CTTGAG	2 cut(s)	628, 1084
BpuMI	CCSGG	2 cut(s)	798, 799
Bsa29I	ATCGAT	1 cut(s)	1908
BsaAI	YACGTR	1 cut(s)	1093
BsaI	GGTCTC	1 cut(s)	2811
BsaJI	CCNNGG	8 cut(s)	279, 384, 797, 1050, 1254, 1349, 1458, 1776
BsaWI	WCCGGW	3 cut(s)	179, 923, 1237
BsaXI	ACNNNNNCTCC	2 cut(s)	232, 262
Bsc4I	CCNNNNNNNGG	3 cut(s)	353, 2192, 2329
Bse118I	RCCGGY	1 cut(s)	1816
Bse1I	ACTGG	1 cut(s)	1373
Bse3DI	GCAATG	2 cut(s)	594, 677
BseAI	TCCGGA	2 cut(s)	179, 1237
BseBI	CCWGG	1 cut(s)	1350
BseCI	ATCGAT	1 cut(s)	1908
BseDI	CCNNGG	8 cut(s)	279, 384, 797, 1050, 1254, 1349, 1458, 1776
BseGI	GGATG	3 cut(s)	157, 2388, 2512
BseLI	CCNNNNNNNGG	3 cut(s)	353, 2192, 2329
BseMI	GCAATG	2 cut(s)	594, 677
BseMII	CTCAG	8 cut(s)	89, 270, 671, 705, 914, 1464, 1986, 2279
BseNI	ACTGG	1 cut(s)	1373
BseRI	GAGGAG	4 cut(s)	258, 504, 874, 1841
BseX3I	CGGCCG	1 cut(s)	2416
BseXI	GCAGC	6 cut(s)	18, 833, 1429, 1462, 1651, 1856
BseYI	CCCAGC	1 cut(s)	2685
Bsh1236I	CGCG	6 cut(s)	48, 770, 772, 861, 1052, 2421
Bsh1285I	CGRYCG	1 cut(s)	2419
BshFI	GGCC	3 cut(s)	521, 796, 2418
BshVI	ATCGAT	1 cut(s)	1908
BsiEI	CGRYCG	1 cut(s)	2419
BsiHKAI	GWGCWC	5 cut(s)	257, 496, 2271, 2505, 2790
BsiHKCI	CYCGRG	2 cut(s)	317, 797
BsiSI	CCGG	6 cut(s)	180, 798, 924, 1238, 1817, 2693
BslI	CCNNNNNNNGG	3 cut(s)	353, 2192, 2329
BsmAI	GTCTC	4 cut(s)	757, 1496, 2591, 2811
BsmBI	CGTCTC	1 cut(s)	1496
BsmI	GAATGC	3 cut(s)	618, 1200, 2400
BsnI	GGCC	3 cut(s)	521, 796, 2418
Bso31I	GGTCTC	1 cut(s)	2811
BsoBI	CYCGRG	2 cut(s)	317, 797
Bsp119I	TTCGAA	1 cut(s)	218
Bsp1286I	GDGCHC	5 cut(s)	257, 496, 2271, 2505, 2790
Bsp13I	TCCGGA	2 cut(s)	179, 1237
Bsp1720I	GCTNAGC	1 cut(s)	1995
Bsp19I	CCATGG	1 cut(s)	1458
BspANI	GGCC	3 cut(s)	521, 796, 2418
BspCNI	CTCAG	8 cut(s)	88, 269, 670, 706, 913, 1465, 1987, 2280
BspDI	ATCGAT	1 cut(s)	1908
BspEI	TCCGGA	2 cut(s)	179, 1237
BspFNI	CGCG	6 cut(s)	48, 770, 772, 861, 1052, 2421
BspHI	TCATGA	2 cut(s)	1231, 1705
BspLI	GGNNCC	7 cut(s)	178, 382, 1149, 1371, 1782, 2088, 2691
BspMAI	CTGCAG	3 cut(s)	630, 823, 1860
BspMI	ACCTGC	3 cut(s)	633, 2194, 2320
BspPI	GGATC	7 cut(s)	505, 1142, 1155, 1229, 1775, 1788, 2096
BspQI	GCTCTTC	1 cut(s)	139
BspT104I	TTCGAA	1 cut(s)	218
BspTNI	GGTCTC	1 cut(s)	2811
BsrBI	CCGCTC	2 cut(s)	149, 1513
BsrDI	GCAATG	2 cut(s)	594, 677
BsrFI	RCCGGY	1 cut(s)	1816
BsrI	ACTGG	1 cut(s)	1373
BssAI	RCCGGY	1 cut(s)	1816
BssECI	CCNNGG	8 cut(s)	279, 384, 797, 1050, 1254, 1349, 1458, 1776
BssSI	CACGAG	1 cut(s)	2498
BssT1I	CCWWGG	2 cut(s)	1458, 1776
Bst2BI	CACGAG	1 cut(s)	2498
Bst2UI	CCWGG	1 cut(s)	1350
Bst4CI	ACNGT	6 cut(s)	89, 1672, 2227, 2240, 2462, 2556
Bst6I	CTCTTC	3 cut(s)	139, 594, 1870
BstAPI	GCANNNNNTGC	2 cut(s)	31, 110
BstBAI	YACGTR	1 cut(s)	1093
BstBI	TTCGAA	1 cut(s)	218
BstC8I	GCNNGC	8 cut(s)	523, 1182, 1200, 1341, 1978, 1982, 2032, 2447
BstDEI	CTNAG	9 cut(s)	75, 256, 657, 714, 900, 1143, 1473, 1995, 2288
BstDSI	CCRYGG	5 cut(s)	279, 384, 1050, 1254, 1458
BstENI	CCTNNNNNAGG	1 cut(s)	2327
BstF5I	GGATG	3 cut(s)	157, 2388, 2512
BstFNI	CGCG	6 cut(s)	48, 770, 772, 861, 1052, 2421
BstHHI	GCGC	4 cut(s)	25, 73, 772, 1494
BstMAI	GTCTC	4 cut(s)	757, 1496, 2591, 2811
BstMCI	CGRYCG	1 cut(s)	2419
BstNI	CCWGG	1 cut(s)	1350
BstNSI	RCATGY	1 cut(s)	2710
BstSCI	CCNGG	3 cut(s)	796, 797, 1348
BstSFI	CTRYAG	4 cut(s)	626, 819, 837, 1856
BstUI	CGCG	6 cut(s)	48, 770, 772, 861, 1052, 2421
BstV1I	GCAGC	6 cut(s)	18, 833, 1429, 1462, 1651, 1856
BstV2I	GAAGAC	2 cut(s)	1065, 2131
BstX2I	RGATCY	3 cut(s)	510, 1147, 1780
BstXI	CCANNNNNNTGG	1 cut(s)	2665
BstYI	RGATCY	3 cut(s)	510, 1147, 1780
BstZI	CGGCCG	1 cut(s)	2416
Bsu15I	ATCGAT	1 cut(s)	1908
BsuI	GTATCC	1 cut(s)	322
BsuRI	GGCC	3 cut(s)	521, 796, 2418
BsuTUI	ATCGAT	1 cut(s)	1908
BtgI	CCRYGG	5 cut(s)	279, 384, 1050, 1254, 1458
BtsCI	GGATG	3 cut(s)	157, 2388, 2512
BtsI	GCAGTG	1 cut(s)	1853
BtsIMutI	CAGTG	3 cut(s)	1380, 1677, 1853
BveI	ACCTGC	3 cut(s)	633, 2194, 2320
Cac8I	GCNNGC	8 cut(s)	523, 1182, 1200, 1341, 1978, 1982, 2032, 2447
CaiI	CAGNNNCTG	1 cut(s)	31
CciI	TCATGA	2 cut(s)	1231, 1705
CciNI	GCGGCCGC	1 cut(s)	2416
CfoI	GCGC	4 cut(s)	25, 73, 772, 1494
Cfr10I	RCCGGY	1 cut(s)	1816
Cfr13I	GGNCC	3 cut(s)	167, 795, 2556
Cfr42I	CCGCGG	1 cut(s)	1053
Cfr9I	CCCGGG	1 cut(s)	797
ClaI	ATCGAT	1 cut(s)	1908
CseI	GACGC	2 cut(s)	37, 406
CspCI	CAANNNNNGTGG	2 cut(s)	1518, 1553
CviAII	CATG	5 cut(s)	1232, 1459, 1706, 1841, 2707
DdeI	CTNAG	9 cut(s)	75, 256, 657, 714, 900, 1143, 1473, 1995, 2288
DraI	TTTAAA	1 cut(s)	1249
EaeI	YGGCCR	1 cut(s)	2416
EagI	CGGCCG	1 cut(s)	2416
Eam1104I	CTCTTC	3 cut(s)	139, 594, 1870
EarI	CTCTTC	3 cut(s)	139, 594, 1870
EciI	GGCGGA	1 cut(s)	2657
Ecl136II	GAGCTC	2 cut(s)	255, 2503
EclXI	CGGCCG	1 cut(s)	2416
Eco130I	CCWWGG	2 cut(s)	1458, 1776
Eco147I	AGGCCT	1 cut(s)	521
Eco24I	GRGCYC	2 cut(s)	257, 2505
Eco31I	GGTCTC	1 cut(s)	2811
Eco32I	GATATC	1 cut(s)	1569
Eco47I	GGWCC	2 cut(s)	167, 2556
Eco52I	CGGCCG	1 cut(s)	2416
Eco53kI	GAGCTC	2 cut(s)	255, 2503
Eco57I	CTGAAG	2 cut(s)	2345, 2624
Eco72I	CACGTG	1 cut(s)	1093
Eco88I	CYCGRG	2 cut(s)	317, 797
EcoICRI	GAGCTC	2 cut(s)	255, 2503
EcoNI	CCTNNNNNAGG	1 cut(s)	2327
EcoRII	CCWGG	1 cut(s)	1348
EcoRV	GATATC	1 cut(s)	1569
EcoT14I	CCWWGG	2 cut(s)	1458, 1776
EcoT22I	ATGCAT	2 cut(s)	115, 2682
EcoT38I	GRGCYC	2 cut(s)	257, 2505
ErhI	CCWWGG	2 cut(s)	1458, 1776
Esp3I	CGTCTC	1 cut(s)	1496
FaeI	CATG	5 cut(s)	1235, 1462, 1709, 1844, 2710
FatI	CATG	5 cut(s)	1231, 1458, 1705, 1840, 2706
FauNDI	CATATG	1 cut(s)	115
FbaI	TGATCA	2 cut(s)	2167, 2337
FblI	GTMKAC	1 cut(s)	2439
FokI	GGATG	3 cut(s)	164, 2375, 2499
FriOI	GRGCYC	2 cut(s)	257, 2505
FspBI	CTAG	8 cut(s)	336, 353, 515, 683, 1305, 1653, 1872, 2045
FspI	TGCGCA	1 cut(s)	24
GlaI	GCGC	4 cut(s)	24, 72, 771, 1493
GsaI	CCCAGC	1 cut(s)	2689
GsuI	CTGGAG	2 cut(s)	1430, 2102
HaeIII	GGCC	3 cut(s)	521, 796, 2418
HapII	CCGG	6 cut(s)	180, 798, 924, 1238, 1817, 2693
HgaI	GACGC	2 cut(s)	37, 406
HhaI	GCGC	4 cut(s)	25, 73, 772, 1494
Hin1II	CATG	5 cut(s)	1235, 1462, 1709, 1844, 2710
Hin6I	GCGC	4 cut(s)	23, 71, 770, 1492
HinP1I	GCGC	4 cut(s)	23, 71, 770, 1492
HpaII	CCGG	6 cut(s)	180, 798, 924, 1238, 1817, 2693
HphI	GGTGA	4 cut(s)	458, 826, 1470, 1758
Hpy166II	GTNNAC	3 cut(s)	622, 2440, 2795
Hpy8I	GTNNAC	3 cut(s)	622, 2440, 2795
HpyAV	CCTTC	9 cut(s)	398, 562, 786, 805, 836, 1324, 1501, 1855, 2521
HpyCH4III	ACNGT	6 cut(s)	89, 1672, 2227, 2240, 2462, 2556
HpyCH4IV	ACGT	4 cut(s)	1092, 1169, 1398, 1942
HpyF3I	CTNAG	9 cut(s)	75, 256, 657, 714, 900, 1143, 1473, 1995, 2288
HpySE526I	ACGT	4 cut(s)	1092, 1169, 1398, 1942
Hsp92II	CATG	5 cut(s)	1235, 1462, 1709, 1844, 2710
HspAI	GCGC	4 cut(s)	23, 71, 770, 1492
Kpn2I	TCCGGA	2 cut(s)	179, 1237
Ksp22I	TGATCA	2 cut(s)	2167, 2337
KspI	CCGCGG	1 cut(s)	1053
LguI	GCTCTTC	1 cut(s)	139
LmnI	GCTCC	8 cut(s)	182, 252, 380, 491, 1510, 2092, 2266, 2689
Lsp1109I	GCAGC	6 cut(s)	18, 833, 1429, 1462, 1651, 1856
LweI	GCATC	5 cut(s)	100, 1146, 1326, 2225, 2540
MaeI	CTAG	8 cut(s)	336, 353, 515, 683, 1305, 1653, 1872, 2045
MaeII	ACGT	4 cut(s)	1092, 1169, 1398, 1942
MaeIII	GTNAC	6 cut(s)	440, 641, 814, 1476, 1949, 2240
MbiI	CCGCTC	2 cut(s)	149, 1513
MfeI	CAATTG	1 cut(s)	987
MflI	RGATCY	3 cut(s)	510, 1147, 1780
MhlI	GDGCHC	5 cut(s)	257, 496, 2271, 2505, 2790
MlyI	GAGTC	5 cut(s)	611, 968, 1484, 2121, 2593
MmeI	TCCRAC	3 cut(s)	71, 769, 2040
Mph1103I	ATGCAT	2 cut(s)	115, 2682
MroI	TCCGGA	2 cut(s)	179, 1237
MseI	TTAA	6 cut(s)	537, 854, 1137, 1248, 2229, 2851
MspA1I	CMGCKG	4 cut(s)	1052, 1664, 1736, 2415
MspI	CCGG	6 cut(s)	180, 798, 924, 1238, 1817, 2693
MspR9I	CCNGG	3 cut(s)	798, 799, 1350
MunI	CAATTG	1 cut(s)	987
Mva1269I	GAATGC	3 cut(s)	618, 1200, 2400
MvaI	CCWGG	1 cut(s)	1350
MvnI	CGCG	6 cut(s)	48, 770, 772, 861, 1052, 2421
NciI	CCSGG	2 cut(s)	798, 799
NcoI	CCATGG	1 cut(s)	1458
NdeI	CATATG	1 cut(s)	115
NlaIII	CATG	5 cut(s)	1235, 1462, 1709, 1844, 2710
NlaIV	GGNNCC	7 cut(s)	178, 382, 1149, 1371, 1782, 2088, 2691
NmuCI	GTSAC	4 cut(s)	814, 1476, 1949, 2240
NotI	GCGGCCGC	1 cut(s)	2416
NsbI	TGCGCA	1 cut(s)	24
NsiI	ATGCAT	2 cut(s)	115, 2682
NspI	RCATGY	1 cut(s)	2710
NspV	TTCGAA	1 cut(s)	218
PagI	TCATGA	2 cut(s)	1231, 1705
PaqCI	CACCTGC	1 cut(s)	2194
PceI	AGGCCT	1 cut(s)	521
PciSI	GCTCTTC	1 cut(s)	139
PcsI	WCGNNNNNNNCGW	1 cut(s)	45
PctI	GAATGC	3 cut(s)	618, 1200, 2400
PfeI	GAWTC	8 cut(s)	133, 220, 364, 505, 937, 982, 1905, 2048
PleI	GAGTC	5 cut(s)	610, 967, 1483, 2121, 2593
PmaCI	CACGTG	1 cut(s)	1093
PmlI	CACGTG	1 cut(s)	1093
PpsI	GAGTC	5 cut(s)	610, 967, 1483, 2121, 2593
Ppu21I	YACGTR	1 cut(s)	1093
Psp124BI	GAGCTC	2 cut(s)	257, 2505
Psp1406I	AACGTT	1 cut(s)	1398
Psp6I	CCWGG	1 cut(s)	1348
PspCI	CACGTG	1 cut(s)	1093
PspFI	CCCAGC	1 cut(s)	2685
PspGI	CCWGG	1 cut(s)	1348
PspN4I	GGNNCC	7 cut(s)	178, 382, 1149, 1371, 1782, 2088, 2691
PspPI	GGNCC	3 cut(s)	167, 795, 2556
PstI	CTGCAG	3 cut(s)	630, 823, 1860
PstNI	CAGNNNCTG	1 cut(s)	31
PsuI	RGATCY	3 cut(s)	510, 1147, 1780
SacI	GAGCTC	2 cut(s)	257, 2505
SacII	CCGCGG	1 cut(s)	1053
SapI	GCTCTTC	1 cut(s)	139
SaqAI	TTAA	6 cut(s)	537, 854, 1137, 1248, 2229, 2851
Sau96I	GGNCC	3 cut(s)	167, 795, 2556
SbfI	CCTGCAGG	1 cut(s)	630
SchI	GAGTC	5 cut(s)	611, 968, 1484, 2121, 2593
ScrFI	CCNGG	3 cut(s)	798, 799, 1350
SdaI	CCTGCAGG	1 cut(s)	630
SduI	GDGCHC	5 cut(s)	257, 496, 2271, 2505, 2790
SfaNI	GCATC	5 cut(s)	100, 1146, 1326, 2225, 2540
SfcI	CTRYAG	4 cut(s)	626, 819, 837, 1856
Sfr303I	CCGCGG	1 cut(s)	1053
SfuI	TTCGAA	1 cut(s)	218
SgrBI	CCGCGG	1 cut(s)	1053
SinI	GGWCC	2 cut(s)	167, 2556
SmaI	CCCGGG	1 cut(s)	799
SmlI	CTYRAG	2 cut(s)	607, 1063
SmoI	CTYRAG	2 cut(s)	607, 1063
Sse8387I	CCTGCAGG	1 cut(s)	630
SseBI	AGGCCT	1 cut(s)	521
SspI	AATATT	1 cut(s)	1263
SspMI	CTAG	8 cut(s)	336, 353, 515, 683, 1305, 1653, 1872, 2045
SstI	GAGCTC	2 cut(s)	257, 2505
StuI	AGGCCT	1 cut(s)	521
StyD4I	CCNGG	3 cut(s)	796, 797, 1348
StyI	CCWWGG	2 cut(s)	1458, 1776
TaaI	ACNGT	6 cut(s)	89, 1672, 2227, 2240, 2462, 2556
TaiI	ACGT	4 cut(s)	1095, 1172, 1401, 1945
TaqII	GACCGA	1 cut(s)	184
TauI	GCSGC	4 cut(s)	1516, 1664, 2418, 2421
TfiI	GAWTC	8 cut(s)	133, 220, 364, 505, 937, 982, 1905, 2048
Tru1I	TTAA	6 cut(s)	537, 854, 1137, 1248, 2229, 2851
Tru9I	TTAA	6 cut(s)	537, 854, 1137, 1248, 2229, 2851
TscAI	CASTG	3 cut(s)	1380, 1677, 1860
TseFI	GTSAC	4 cut(s)	814, 1476, 1949, 2240
TseI	GCWGC	6 cut(s)	31, 821, 1417, 1450, 1664, 1844
Tsp45I	GTSAC	4 cut(s)	814, 1476, 1949, 2240
TspGWI	ACGGA	1 cut(s)	268
TspMI	CCCGGG	1 cut(s)	797
TspRI	CASTG	3 cut(s)	1380, 1677, 1860
VpaK11BI	GGWCC	2 cut(s)	167, 2556
XagI	CCTNNNNNAGG	1 cut(s)	2327
XapI	RAATTY	5 cut(s)	1244, 1362, 1518, 1744, 1801
XbaI	TCTAGA	1 cut(s)	1871
XceI	RCATGY	1 cut(s)	2710
XmaI	CCCGGG	1 cut(s)	797
XmiI	GTMKAC	1 cut(s)	2439
XspI	CTAG	8 cut(s)	336, 353, 515, 683, 1305, 1653, 1872, 2045
Zsp2I	ATGCAT	2 cut(s)	115, 2682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.