Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001727

Physical Location & Seq

Genomic Coordinates Reverse (-)

55528621 .. 55532735

Gene Structure 4115 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034833

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ATGGCGAAGAGATCAGATTTTGCGCAAAAGCTGCTGGATGATCTTCGGGTTAGGAAGGAAAGAATGGCTGCACCAGCGCAGAGCTCAAACCGTTCAAACGCAATGGCTATAGATGCATATGCTTATTCCAAGCAAACTTATAGAGGATCAAGGGATACAAAAACCCATGGAATAACTAGTTCCAGAAATGGGAACCCCCAGAGCAGGTCAACTGGAAGTAGTAGAACACCTATTCGTCAAGAAGCTTCAAACCAGATGGTTGCTTATGGGAGAGGTGGGAACTCAGGACAAATAGTAGATCTTTCCATGGCCTTGGCTTTTGCACTTGAGAATGGAGCCACAAAACTCACCAGAACAAGTTCATCAAGCAAAAGTTCAGTGATGGGGTTTCTGAATCAAATTGGTAGGGGATCCATGGACTTCAAAAAAATGGAAAGAAAGGGAAATGTCAACATGTACTGGGGTTCAAGTAGTCAGTTCCCTAACCTTTCAAATTTCCATATAGAAGAAATATCCAGAGGGGCACAGAAACTAAACCAGATCCTTAGAGCTTGCTCCAATGGTGTTAATGTTGATAAGTTTTCAATAGAGATCGGGAAGGAACTGTTTAAAGGGGCCATGGATTTGGAAGAGTCCTTGAGAATGCTTGTGAACCTGCAGGAAGCTTCAGAACATATGACCACCTCCCAAAGGAAAAGTCGGATCACATTGCTAGACGAAGATGAAGATGGTGAAGACCAAATAGAAGAACAAAAGCAACTGGCTCTGCCAAGGTTTTCCTTTGATAAATCAACAAGACATGCTCGTAAAATCCAAGAAGTAGGAAGGATGGCCCTCAAGCCTAAGATGGCAGCTCTGACTTACCCCACAGGAGGTAGTACGGATGAGAAGCAAGGCAGAGAGACAGCAACCTCAGTTTCTCGCAGGCATTTAGTCAGCTATATCCCTGATGTCAAAAATCCATCAAAACAGTCAGACCAGAAAGTGTCTAAACCAGAAAAAGATAGGATTCCAAATGTTATTGCAAAGCTGATGGGCCTGGATGAGCTTCCCAAAAATGAAAACGCAAAATCCACTACCACACAGAAATACAATATCCCCAAGAAACCAAGAGAAAGGGGAGCTGCAATAGGGCACACAATGCAGGAAAGCAGTAAGATTGCTGGTGTTAAGACCAAAGATGGTGAGAATCTGGTATCCACAAGTAGACAGAAAGTGGTAGAAGGCAATAAGAATCCATTGATGCAGAAGAACACTGCTTTTCTTCTGCAAGCAGAAAAGGTCTTGCCTGCCAACAACAATGTTGGCCTTGAGATGGTTATTCATGATGGAAAACAATCCTCAAAAGACTTGATGGGAATAAAACCTGTGACAAGATCAGGAAAGACAACCACCATTAAAACAGATAAGCAGCAAAGTGCCCAATTCAGACAGAACAGCAGTAAGGATAATCACGAAAGAGAAAGAAAGCAGGATACTATGAGGTATGGGGAACAAAAGTTGCAGGTAAGAAAAGAACAAGATACTGAGATGGTATCCAAGAGTACATCCAACAAGGCAACAAAGCAGCCTCACACAAGCCAAGCCAGGGTAAATAGAAACGGTATGATAGAAGTTGTTAATGACGTGCAACCCAGAGGAGTTCCAAATGGCACTTACCACGAGAATCTGGTGAGAAGAAAAAGTTCAGCTGAATTGAACATCCATATGAATGATTTTCCTCAAAAGGACTTAGATCAAGAAAATTTAGGCATTCCACCAGCTAGGAAGGAGAAAGCTATTCATCATGTAGCACCCTTACAGAAGGCAAAAACTAGAAGAGTGAATAAAAGTGAAATTCCTCGAAGAGTGGATGAAGTAGTGACCAGAAGAAATGGAACGCTGAATAAGTTGACAAGGCCACCAAAACAGTCTATTTTGGAGCAAGTGACACATAGAACCCATGATAAAGTCAGTGGCCACAGTGGAGCAGAAAAGGGTAGAGCCAGCAGGTTGAAACAAGCAGAGCCGCGCATAGTCAAGTCCAACAAATCAACAGAAAGCACTCGACCACTACATTTGGTACAGAACCTACAGAAAGAAGCTGAGGCTCCTACTTTCTATGGTCACAATGAAGACGAATTCCGAAGCCTCCGAGAACCAAAAACTCTAGTCCGACATGACAGTCGTCAAAATTCAATCTCAGTAGTACCTAACGATCAACATGATCAAGTACCAATCTTTGGAGCTGATGAGTGCATTACATCACCAAATGCACTTAATGGAACCCAATCAACCCATGAAGACACCTTGGATATTTCATCCACATTGCAATTGGAGACAGAGAAGCCTTTCAAATGGAGAAAACAAGAGCCACTTACAGAAACTGAAATCCTTCTCAAGCAGATAGTGATCCAGAGCCAACTGTTCCTCAACACAGCAGAGGCACTTTTCAGACTCGAAATCCCTTTCGGAATTCTCCACGCTAGTAGTAGCGACTACGATCATGAGTACAAGTACATCACTCATCCCGAAGACATTAAGCTCACATTAGACTGCAGCTACGAGATAATGAAAAGAAAAGGTAAAAGGCAAGAGCTCGCTGTGCATCCCACTTTTGTGAAGGTATCCATAAGCTTCACTCAAGTCCAGTCTCTGGATGAGCTGGTTAAGCAGTTGAGTAAAGACATTGATAAGCTGAAACTGTATGGGAAGAATGGAAAACTGGAATGTGGGGCTGAAGAGTATGTGCCTAGAATGCTTGAATTCGACGTGAATAACAGGGAGCCTGAGCTGAATTGTATGTGGGATTTGGGTTGGGATGTGACCATGTTTGGGTTTGTTGAAGTGGATGAAGTTGTTAGGGATTTGGAGATGGGTGTGCTCAGTGGACTTGTTGATGAGCTTACCAGAGACCTCTTTCATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VARLMGL

Protein Analysis

970

Amino Acids

109.45

Weight (kDa)

9.37

Isoelectric Point (pI)

46.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001727)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42710 AT5G42710 AT5G42710
fragaria_vesca	FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870
malus_domestica	MD08G1035200.v1.1 MD15G1031800.v1.1
prunus_persica	Prupe.1G380200_v2.0.a1
pyrus_communis	pycom08g02780 pycom15g02750
rosa_chinensis	RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941
rosa_laevigata	RLG00000011289 RLG00000034832 RLG00000034833
rosa_multiflora	Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003
rosa_roxburghii	Rroxscaffold_1G00028100 Rroxscaffold_7G00167300
rosa_rugosa	Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700
rosa_samantha	Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300
rosa_wichuraiana	Rw5G032650 Rw5G032690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2163
Acc16I	TGCGCA	1 cut(s)	24
Acc36I	ACCTGC	4 cut(s)	195, 663, 1495, 1980
AccB7I	CCANNNNNTGG	2 cut(s)	2222, 2635
AccI	GTMKAC	1 cut(s)	1207
AccII	CGCG	1 cut(s)	2011
AciI	CCGC	1 cut(s)	2009
AclWI	GGATC	6 cut(s)	154, 405, 418, 535, 710, 2386
AcoI	YGGCCR	1 cut(s)	1957
AcsI	RAATTY	7 cut(s)	493, 1744, 1836, 2120, 2173, 2454, 2744
AcuI	CTGAAG	2 cut(s)	651, 2739
AfaI	GTAC	8 cut(s)	458, 880, 1546, 2064, 2190, 2214, 2492, 2498
AfiI	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2635, 2814
AflIII	ACRYGT	1 cut(s)	453
AhlI	ACTAGT	1 cut(s)	176
AjiI	CACGTC	2 cut(s)	1627, 2752
AjnI	CCWGG	2 cut(s)	1038, 1586
AleI	CACNNNNGTG	1 cut(s)	2597
Alw21I	GWGCWC	3 cut(s)	86, 2580, 2865
Alw26I	GTCTC	4 cut(s)	896, 2312, 2637, 2886
AlwI	GGATC	6 cut(s)	154, 405, 418, 535, 710, 2386
AlwNI	CAGNNNCTG	2 cut(s)	2366, 2635
AoxI	GGCC	7 cut(s)	309, 615, 831, 1036, 1306, 1898, 1957
ApeKI	GCWGC	7 cut(s)	31, 68, 851, 1124, 1411, 1567, 2538
ApoI	RAATTY	7 cut(s)	493, 1744, 1836, 2120, 2173, 2454, 2744
ArsI	GACNNNNNNTTYG	2 cut(s)	682, 714
Asp700I	GAANNNNTTC	4 cut(s)	358, 1684, 2330, 2373
AspLEI	GCGC	3 cut(s)	25, 79, 2013
AspS9I	GGNCC	3 cut(s)	615, 832, 1036
AsuHPI	GGTGA	5 cut(s)	340, 743, 1196, 1684, 2238
BaeGI	GKGCMC	3 cut(s)	526, 1137, 1423
BalI	TGGCCA	1 cut(s)	1959
BamHI	GGATCC	1 cut(s)	410
BanII	GRGCYC	2 cut(s)	86, 2580
BauI	CACGAG	1 cut(s)	1661
BbsI	GAAGAC	4 cut(s)	741, 2121, 2289, 2520
Bbv12I	GWGCWC	3 cut(s)	86, 2580, 2865
BbvCI	CCTCAGC	1 cut(s)	2085
BbvI	GCAGC	7 cut(s)	18, 55, 863, 1111, 1423, 1579, 2550
BciT130I	CCWGG	2 cut(s)	1040, 1588
BciVI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2617
BclI	TGATCA	1 cut(s)	2206
BcoDI	GTCTC	4 cut(s)	896, 2312, 2637, 2886
BcuI	ACTAGT	1 cut(s)	176
BfaI	CTAG	7 cut(s)	177, 713, 1764, 1815, 2150, 2466, 2733
BfmI	CTRYAG	4 cut(s)	108, 656, 2072, 2536
BfuAI	ACCTGC	4 cut(s)	195, 663, 1495, 1980
BfuI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2617
BglII	AGATCT	1 cut(s)	298
BisI	GCNGC	8 cut(s)	32, 69, 852, 1125, 1412, 1568, 2009, 2539
BlsI	GCNGC	8 cut(s)	33, 70, 853, 1126, 1413, 1569, 2010, 2540
Bme1390I	CCNGG	2 cut(s)	1040, 1588
BmgBI	CACGTC	2 cut(s)	1627, 2752
BmgT120I	GGNCC	3 cut(s)	615, 832, 1036
BmiI	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2266, 2766
BmrFI	CCNGG	2 cut(s)	1040, 1588
BmrI	ACTGGG	1 cut(s)	469
BmsI	GCATC	3 cut(s)	103, 1233, 2596
BmuI	ACTGGG	1 cut(s)	469
BoxI	GACNNNNGTC	1 cut(s)	2166
BpiI	GAAGAC	4 cut(s)	741, 2121, 2289, 2520
Bpu10I	CCTNAGC	2 cut(s)	2085, 2769
BpuEI	CTTGAG	6 cut(s)	347, 658, 821, 1331, 2363, 2607
BsaBI	GATNNNNATC	1 cut(s)	2390
BsaI	GGTCTC	1 cut(s)	2886
BsaJI	CCNNGG	8 cut(s)	166, 306, 312, 414, 618, 770, 1587, 2289
Bsc4I	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2635, 2814
Bse1I	ACTGG	5 cut(s)	217, 464, 765, 2629, 2709
Bse3DI	GCAATG	3 cut(s)	108, 707, 2306
Bse8I	GATNNNNATC	1 cut(s)	2390
BseBI	CCWGG	2 cut(s)	1040, 1588
BseDI	CCNNGG	8 cut(s)	166, 306, 312, 414, 618, 770, 1587, 2289
BseJI	GATNNNNATC	1 cut(s)	2390
BseLI	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2635, 2814
BseMI	GCAATG	3 cut(s)	108, 707, 2306
BseMII	CTCAG	7 cut(s)	297, 927, 1518, 2076, 2196, 2760, 2878
BseNI	ACTGG	5 cut(s)	217, 464, 765, 2629, 2709
BseRI	GAGGAG	1 cut(s)	1653
BseSI	GKGCMC	3 cut(s)	526, 1137, 1423
BseXI	GCAGC	7 cut(s)	18, 55, 863, 1111, 1423, 1579, 2550
BsgI	GTGCAG	1 cut(s)	54
Bsh1236I	CGCG	1 cut(s)	2011
BshFI	GGCC	7 cut(s)	311, 617, 833, 1038, 1308, 1900, 1959
BsiHKAI	GWGCWC	3 cut(s)	86, 2580, 2865
BslI	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2635, 2814
BsmAI	GTCTC	4 cut(s)	896, 2312, 2637, 2886
BsmI	GAATGC	3 cut(s)	648, 1752, 2742
BsnI	GGCC	7 cut(s)	311, 617, 833, 1038, 1308, 1900, 1959
Bso31I	GGTCTC	1 cut(s)	2886
Bsp1286I	GDGCHC	6 cut(s)	86, 526, 1137, 1423, 2580, 2865
Bsp19I	CCATGG	4 cut(s)	166, 306, 414, 618
BspACI	CCGC	1 cut(s)	2009
BspANI	GGCC	7 cut(s)	311, 617, 833, 1038, 1308, 1900, 1959
BspCNI	CTCAG	7 cut(s)	296, 926, 1519, 2077, 2195, 2761, 2877
BspFNI	CGCG	1 cut(s)	2011
BspHI	TCATGA	2 cut(s)	1324, 2485
BspLI	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2266, 2766
BspMAI	CTGCAG	2 cut(s)	660, 2540
BspMI	ACCTGC	4 cut(s)	195, 663, 1495, 1980
BspPI	GGATC	6 cut(s)	154, 405, 418, 535, 710, 2386
BspTNI	GGTCTC	1 cut(s)	2886
BsrDI	GCAATG	3 cut(s)	108, 707, 2306
BsrI	ACTGG	5 cut(s)	217, 464, 765, 2629, 2709
BssECI	CCNNGG	8 cut(s)	166, 306, 312, 414, 618, 770, 1587, 2289
BssSI	CACGAG	1 cut(s)	1661
BssT1I	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2289
Bst2BI	CACGAG	1 cut(s)	1661
Bst2UI	CCWGG	2 cut(s)	1040, 1588
Bst4CI	ACNGT	9 cut(s)	92, 606, 972, 1604, 1911, 1964, 2165, 2406, 2685
Bst6I	CTCTTC	5 cut(s)	2, 624, 1813, 1840, 2715
BstAPI	GCANNNNNTGC	2 cut(s)	31, 1141
BstC8I	GCNNGC	6 cut(s)	553, 926, 1272, 1290, 1987, 2580
BstDSI	CCRYGG	4 cut(s)	166, 306, 414, 618
BstENI	CCTNNNNNAGG	1 cut(s)	688
BstFNI	CGCG	1 cut(s)	2011
BstHHI	GCGC	3 cut(s)	25, 79, 2013
BstMAI	GTCTC	4 cut(s)	896, 2312, 2637, 2886
BstMWI	GCNNNNNNNGC	7 cut(s)	31, 74, 113, 1141, 2584, 2650, 2737
BstNI	CCWGG	2 cut(s)	1040, 1588
BstNSI	RCATGY	2 cut(s)	457, 803
BstPAI	GACNNNNGTC	1 cut(s)	2166
BstSCI	CCNGG	2 cut(s)	1038, 1586
BstSFI	CTRYAG	4 cut(s)	108, 656, 2072, 2536
BstSLI	GKGCMC	3 cut(s)	526, 1137, 1423
BstUI	CGCG	1 cut(s)	2011
BstV1I	GCAGC	7 cut(s)	18, 55, 863, 1111, 1423, 1579, 2550
BstV2I	GAAGAC	4 cut(s)	741, 2121, 2289, 2520
BstX2I	RGATCY	3 cut(s)	298, 410, 540
BstXI	CCANNNNNNTGG	2 cut(s)	313, 625
BstYI	RGATCY	3 cut(s)	298, 410, 540
BsuI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2617
BsuRI	GGCC	7 cut(s)	311, 617, 833, 1038, 1308, 1900, 1959
BtgI	CCRYGG	4 cut(s)	166, 306, 414, 618
BtrI	CACGTC	2 cut(s)	1627, 2752
BtsI	GCAGTG	1 cut(s)	1254
BtsIMutI	CAGTG	5 cut(s)	384, 1254, 1960, 1969, 2872
BveI	ACCTGC	4 cut(s)	195, 663, 1495, 1980
Cac8I	GCNNGC	6 cut(s)	553, 926, 1272, 1290, 1987, 2580
CaiI	CAGNNNCTG	2 cut(s)	2366, 2635
CciI	TCATGA	2 cut(s)	1324, 2485
CfoI	GCGC	3 cut(s)	25, 79, 2013
Cfr13I	GGNCC	3 cut(s)	615, 832, 1036
Csp6I	GTAC	8 cut(s)	457, 879, 1545, 2063, 2189, 2213, 2491, 2497
CspCI	CAANNNNNGTGG	2 cut(s)	2040, 2075
CviQI	GTAC	8 cut(s)	457, 879, 1545, 2063, 2189, 2213, 2491, 2497
DraI	TTTAAA	1 cut(s)	610
DrdI	GACNNNNNNGTC	1 cut(s)	2163
DseDI	GACNNNNNNGTC	1 cut(s)	2163
EaeI	YGGCCR	1 cut(s)	1957
Eam1104I	CTCTTC	5 cut(s)	2, 624, 1813, 1840, 2715
EarI	CTCTTC	5 cut(s)	2, 624, 1813, 1840, 2715
Ecl136II	GAGCTC	2 cut(s)	84, 2578
Eco130I	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2289
Eco24I	GRGCYC	2 cut(s)	86, 2580
Eco31I	GGTCTC	1 cut(s)	2886
Eco53kI	GAGCTC	2 cut(s)	84, 2578
Eco57I	CTGAAG	2 cut(s)	651, 2739
EcoICRI	GAGCTC	2 cut(s)	84, 2578
EcoNI	CCTNNNNNAGG	1 cut(s)	688
EcoRI	GAATTC	3 cut(s)	2120, 2454, 2744
EcoRII	CCWGG	2 cut(s)	1038, 1586
EcoT14I	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2289
EcoT22I	ATGCAT	1 cut(s)	118
EcoT38I	GRGCYC	2 cut(s)	86, 2580
ErhI	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2289
FalI	AAGNNNNNCTT	2 cut(s)	2340, 2372
FauNDI	CATATG	4 cut(s)	118, 675, 1707, 2904
FbaI	TGATCA	1 cut(s)	2206
FblI	GTMKAC	1 cut(s)	1207
Fnu4HI	GCNGC	8 cut(s)	32, 69, 852, 1125, 1412, 1568, 2009, 2539
FriOI	GRGCYC	2 cut(s)	86, 2580
Fsp4HI	GCNGC	8 cut(s)	32, 69, 852, 1125, 1412, 1568, 2009, 2539
FspBI	CTAG	7 cut(s)	177, 713, 1764, 1815, 2150, 2466, 2733
FspI	TGCGCA	1 cut(s)	24
GlaI	GCGC	3 cut(s)	24, 78, 2012
GluI	GCNGC	8 cut(s)	32, 69, 852, 1125, 1412, 1568, 2009, 2539
HaeIII	GGCC	7 cut(s)	311, 617, 833, 1038, 1308, 1900, 1959
HhaI	GCGC	3 cut(s)	25, 79, 2013
Hin6I	GCGC	3 cut(s)	23, 77, 2011
HinP1I	GCGC	3 cut(s)	23, 77, 2011
HincII	GTYRAC	3 cut(s)	210, 451, 1893
HindII	GTYRAC	3 cut(s)	210, 451, 1893
HindIII	AAGCTT	3 cut(s)	243, 663, 2614
HinfI	GANTC	7 cut(s)	394, 632, 1009, 1189, 1234, 1666, 2436
HphI	GGTGA	5 cut(s)	340, 743, 1196, 1684, 2238
Hpy166II	GTNNAC	6 cut(s)	210, 451, 652, 1208, 1893, 2870
Hpy8I	GTNNAC	6 cut(s)	210, 451, 652, 1208, 1893, 2870
Hpy99I	CGWCG	1 cut(s)	2753
HpyAV	CCTTC	8 cut(s)	49, 592, 819, 1217, 1762, 1798, 2384, 2596
HpyCH4III	ACNGT	9 cut(s)	92, 606, 972, 1604, 1911, 1964, 2165, 2406, 2685
HpyCH4IV	ACGT	2 cut(s)	1626, 2751
HpyF10VI	GCNNNNNNNGC	7 cut(s)	31, 74, 113, 1141, 2584, 2650, 2737
HpySE526I	ACGT	2 cut(s)	1626, 2751
HspAI	GCGC	3 cut(s)	23, 77, 2011
Ksp22I	TGATCA	1 cut(s)	2206
LmnI	GCTCC	8 cut(s)	335, 560, 1121, 1921, 1967, 2095, 2225, 2764
Lsp1109I	GCAGC	7 cut(s)	18, 55, 863, 1111, 1423, 1579, 2550
LweI	GCATC	3 cut(s)	103, 1233, 2596
MaeI	CTAG	7 cut(s)	177, 713, 1764, 1815, 2150, 2466, 2733
MaeII	ACGT	2 cut(s)	1626, 2751
MaeIII	GTNAC	5 cut(s)	1369, 1861, 1927, 2105, 2803
MfeI	CAATTG	1 cut(s)	2312
MflI	RGATCY	3 cut(s)	298, 410, 540
MhlI	GDGCHC	6 cut(s)	86, 526, 1137, 1423, 2580, 2865
MlsI	TGGCCA	1 cut(s)	1959
MluNI	TGGCCA	1 cut(s)	1959
MlyI	GAGTC	2 cut(s)	641, 2430
MmeI	TCCRAC	4 cut(s)	680, 1575, 2049, 2179
Mox20I	TGGCCA	1 cut(s)	1959
Mph1103I	ATGCAT	1 cut(s)	118
MroXI	GAANNNNTTC	4 cut(s)	358, 1684, 2330, 2373
MscI	TGGCCA	1 cut(s)	1959
MseI	TTAA	8 cut(s)	567, 609, 1170, 1398, 1620, 2259, 2520, 2649
MslI	CAYNNNNRTG	3 cut(s)	1706, 1710, 2597
Msp20I	TGGCCA	1 cut(s)	1959
MspA1I	CMGCKG	1 cut(s)	1691
MspR9I	CCNGG	2 cut(s)	1040, 1588
MunI	CAATTG	1 cut(s)	2312
Mva1269I	GAATGC	3 cut(s)	648, 1752, 2742
MvaI	CCWGG	2 cut(s)	1040, 1588
MvnI	CGCG	1 cut(s)	2011
MwoI	GCNNNNNNNGC	7 cut(s)	31, 74, 113, 1141, 2584, 2650, 2737
NcoI	CCATGG	4 cut(s)	166, 306, 414, 618
NdeI	CATATG	4 cut(s)	118, 675, 1707, 2904
NlaIV	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2266, 2766
NmuCI	GTSAC	5 cut(s)	1369, 1861, 1927, 2105, 2803
NsbI	TGCGCA	1 cut(s)	24
NsiI	ATGCAT	1 cut(s)	118
NspI	RCATGY	2 cut(s)	457, 803
OliI	CACNNNNGTG	1 cut(s)	2597
PagI	TCATGA	2 cut(s)	1324, 2485
PciI	ACATGT	1 cut(s)	453
PctI	GAATGC	3 cut(s)	648, 1752, 2742
PdmI	GAANNNNTTC	4 cut(s)	358, 1684, 2330, 2373
PfeI	GAWTC	5 cut(s)	394, 1009, 1189, 1234, 1666
PflMI	CCANNNNNTGG	2 cut(s)	2222, 2635
PkrI	GCNGC	8 cut(s)	33, 70, 853, 1126, 1413, 1569, 2010, 2540
PleI	GAGTC	2 cut(s)	640, 2430
PpsI	GAGTC	2 cut(s)	640, 2430
PscI	ACATGT	1 cut(s)	453
PshAI	GACNNNNGTC	1 cut(s)	2166
Psp124BI	GAGCTC	2 cut(s)	86, 2580
Psp6I	CCWGG	2 cut(s)	1038, 1586
PspGI	CCWGG	2 cut(s)	1038, 1586
PspN4I	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2266, 2766
PspPI	GGNCC	3 cut(s)	615, 832, 1036
PstI	CTGCAG	2 cut(s)	660, 2540
PstNI	CAGNNNCTG	2 cut(s)	2366, 2635
PsuI	RGATCY	3 cut(s)	298, 410, 540
PvuII	CAGCTG	1 cut(s)	1691
RsaI	GTAC	8 cut(s)	458, 880, 1546, 2064, 2190, 2214, 2492, 2498
RsaNI	GTAC	8 cut(s)	457, 879, 1545, 2063, 2189, 2213, 2491, 2497
RseI	CAYNNNNRTG	3 cut(s)	1706, 1710, 2597
SacI	GAGCTC	2 cut(s)	86, 2580
SaqAI	TTAA	8 cut(s)	567, 609, 1170, 1398, 1620, 2259, 2520, 2649
SatI	GCNGC	8 cut(s)	32, 69, 852, 1125, 1412, 1568, 2009, 2539
Sau96I	GGNCC	3 cut(s)	615, 832, 1036
SbfI	CCTGCAGG	1 cut(s)	660
SchI	GAGTC	2 cut(s)	641, 2430
ScrFI	CCNGG	2 cut(s)	1040, 1588
SdaI	CCTGCAGG	1 cut(s)	660
SduI	GDGCHC	6 cut(s)	86, 526, 1137, 1423, 2580, 2865
SfaNI	GCATC	3 cut(s)	103, 1233, 2596
SfcI	CTRYAG	4 cut(s)	108, 656, 2072, 2536
SmiMI	CAYNNNNRTG	3 cut(s)	1706, 1710, 2597
SmlI	CTYRAG	6 cut(s)	326, 637, 836, 1310, 2378, 2622
SmoI	CTYRAG	6 cut(s)	326, 637, 836, 1310, 2378, 2622
SpeI	ACTAGT	1 cut(s)	176
Sse8387I	CCTGCAGG	1 cut(s)	660
SsiI	CCGC	1 cut(s)	2009
SspMI	CTAG	7 cut(s)	177, 713, 1764, 1815, 2150, 2466, 2733
SstI	GAGCTC	2 cut(s)	86, 2580
StyD4I	CCNGG	2 cut(s)	1038, 1586
StyI	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2289
TaaI	ACNGT	9 cut(s)	92, 606, 972, 1604, 1911, 1964, 2165, 2406, 2685
TaiI	ACGT	2 cut(s)	1629, 2754
TaqI	TCGA	4 cut(s)	1843, 2047, 2439, 2748
TatI	WGTACW	4 cut(s)	456, 1544, 2490, 2496
TauI	GCSGC	1 cut(s)	2011
TfiI	GAWTC	5 cut(s)	394, 1009, 1189, 1234, 1666
Tru1I	TTAA	8 cut(s)	567, 609, 1170, 1398, 1620, 2259, 2520, 2649
Tru9I	TTAA	8 cut(s)	567, 609, 1170, 1398, 1620, 2259, 2520, 2649
TscAI	CASTG	5 cut(s)	384, 1261, 1960, 1969, 2872
TseFI	GTSAC	5 cut(s)	1369, 1861, 1927, 2105, 2803
TseI	GCWGC	7 cut(s)	31, 68, 851, 1124, 1411, 1567, 2538
Tsp45I	GTSAC	5 cut(s)	1369, 1861, 1927, 2105, 2803
TspGWI	ACGGA	1 cut(s)	896
TspRI	CASTG	5 cut(s)	384, 1261, 1960, 1969, 2872
Van91I	CCANNNNNTGG	2 cut(s)	2222, 2635
XagI	CCTNNNNNAGG	1 cut(s)	688
XapI	RAATTY	7 cut(s)	493, 1744, 1836, 2120, 2173, 2454, 2744
XceI	RCATGY	2 cut(s)	457, 803
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2311
XmiI	GTMKAC	1 cut(s)	1207
XmnI	GAANNNNTTC	4 cut(s)	358, 1684, 2330, 2373
XspI	CTAG	7 cut(s)	177, 713, 1764, 1815, 2150, 2466, 2733
Zsp2I	ATGCAT	1 cut(s)	118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.