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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G42710 AT5G42710 AT5G42710 |
| fragaria_vesca | FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 |
| malus_domestica | MD08G1035200.v1.1 MD15G1031800.v1.1 |
| prunus_persica | Prupe.1G380200_v2.0.a1 |
| pyrus_communis | pycom08g02780 pycom15g02750 |
| rosa_chinensis | RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941 |
| rosa_laevigata | RLG00000011289 RLG00000034832 RLG00000034833 |
| rosa_multiflora | Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00028100 Rroxscaffold_7G00167300 |
| rosa_rugosa | Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700 |
| rosa_samantha | Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300 |
| rosa_wichuraiana | Rw5G032650 Rw5G032690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 130 |
| Acc16I | TGCGCA | 1 cut(s) | 294 |
| Acc36I | ACCTGC | 3 cut(s) | 465, 933, 1657 |
| AccB1I | GGYRCC | 1 cut(s) | 203 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2075, 2488 |
| AccBSI | CCGCTC | 1 cut(s) | 153 |
| AccI | GTMKAC | 2 cut(s) | 14, 1369 |
| AciI | CCGC | 3 cut(s) | 71, 151, 201 |
| AclWI | GGATC | 9 cut(s) | 37, 106, 424, 675, 688, 805, 856, 980, 2239 |
| AcsI | RAATTY | 6 cut(s) | 763, 1079, 1906, 1998, 2307, 2597 |
| AcuI | CTGAAG | 2 cut(s) | 921, 2592 |
| AcyI | GRCGYC | 2 cut(s) | 125, 204 |
| AfaI | GTAC | 6 cut(s) | 728, 1687, 1708, 2043, 2067, 2345 |
| AflII | CTTAAG | 1 cut(s) | 139 |
| AflIII | ACRYGT | 1 cut(s) | 723 |
| AhlI | ACTAGT | 1 cut(s) | 446 |
| AjiI | CACGTC | 2 cut(s) | 198, 2605 |
| AjnI | CCWGG | 2 cut(s) | 1200, 1748 |
| Alw21I | GWGCWC | 3 cut(s) | 1585, 2433, 2718 |
| Alw26I | GTCTC | 3 cut(s) | 2038, 2490, 2739 |
| AlwI | GGATC | 9 cut(s) | 37, 106, 424, 675, 688, 805, 856, 980, 2239 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2219, 2488 |
| Ama87I | CYCGRG | 1 cut(s) | 553 |
| AoxI | GGCC | 7 cut(s) | 51, 179, 579, 885, 1101, 1198, 1468 |
| ApoI | RAATTY | 6 cut(s) | 763, 1079, 1906, 1998, 2307, 2597 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 952, 984 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 628, 1846, 2183, 2226 |
| AspLEI | GCGC | 3 cut(s) | 206, 295, 349 |
| AspS9I | GGNCC | 6 cut(s) | 180, 885, 1102, 1198, 1444, 2479 |
| AsuC2I | CCSGG | 4 cut(s) | 47, 107, 183, 245 |
| AsuHPI | GGTGA | 8 cut(s) | 113, 286, 610, 1013, 1358, 1846, 2091, 2303 |
| AsuNHI | GCTAGC | 1 cut(s) | 212 |
| AvaI | CYCGRG | 1 cut(s) | 553 |
| AvaII | GGWCC | 2 cut(s) | 1444, 2479 |
| BaeGI | GKGCMC | 2 cut(s) | 796, 1299 |
| BamHI | GGATCC | 1 cut(s) | 680 |
| BanI | GGYRCC | 1 cut(s) | 203 |
| BanII | GRGCYC | 1 cut(s) | 2433 |
| BauI | CACGAG | 1 cut(s) | 1823 |
| BbsI | GAAGAC | 4 cut(s) | 170, 1011, 2142, 2373 |
| Bbv12I | GWGCWC | 3 cut(s) | 1585, 2433, 2718 |
| BceAI | ACGGC | 2 cut(s) | 112, 191 |
| BciT130I | CCWGG | 2 cut(s) | 1202, 1750 |
| BciVI | GTATCC | 5 cut(s) | 418, 1369, 1630, 1708, 2470 |
| BclI | TGATCA | 1 cut(s) | 2059 |
| BcnI | CCSGG | 4 cut(s) | 47, 107, 183, 245 |
| BcoDI | GTCTC | 3 cut(s) | 2038, 2490, 2739 |
| BcuI | ACTAGT | 1 cut(s) | 446 |
| BfaI | CTAG | 8 cut(s) | 116, 213, 447, 483, 983, 1977, 2319, 2586 |
| BfmI | CTRYAG | 4 cut(s) | 378, 926, 1137, 2389 |
| BfoI | RGCGCY | 1 cut(s) | 207 |
| BfrI | CTTAAG | 1 cut(s) | 139 |
| BfuAI | ACCTGC | 3 cut(s) | 465, 933, 1657 |
| BfuI | GTATCC | 5 cut(s) | 418, 1369, 1630, 1708, 2470 |
| BglII | AGATCT | 1 cut(s) | 568 |
| Bme1390I | CCNGG | 6 cut(s) | 47, 107, 183, 245, 1202, 1750 |
| Bme18I | GGWCC | 2 cut(s) | 1444, 2479 |
| BmeT110I | CYCGRG | 1 cut(s) | 553 |
| BmgBI | CACGTC | 2 cut(s) | 198, 2605 |
| BmgT120I | GGNCC | 6 cut(s) | 180, 885, 1102, 1198, 1444, 2479 |
| BmiI | GGNNCC | 7 cut(s) | 205, 224, 464, 682, 886, 2119, 2619 |
| BmrFI | CCNGG | 6 cut(s) | 47, 107, 183, 245, 1202, 1750 |
| BmrI | ACTGGG | 2 cut(s) | 468, 739 |
| BmsI | GCATC | 3 cut(s) | 373, 1395, 2449 |
| BmtI | GCTAGC | 1 cut(s) | 216 |
| BmuI | ACTGGG | 2 cut(s) | 468, 739 |
| BpiI | GAAGAC | 4 cut(s) | 170, 1011, 2142, 2373 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2622 |
| BpuEI | CTTGAG | 5 cut(s) | 617, 928, 1091, 1493, 2216 |
| BpuMI | CCSGG | 4 cut(s) | 47, 107, 183, 245 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2243 |
| BsaHI | GRCGYC | 2 cut(s) | 125, 204 |
| BsaI | GGTCTC | 1 cut(s) | 2739 |
| BsaJI | CCNNGG | 8 cut(s) | 244, 436, 576, 582, 684, 888, 1749, 2142 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 210, 214, 240, 244 |
| Bse1I | ACTGG | 5 cut(s) | 463, 734, 1035, 2482, 2562 |
| Bse3DI | GCAATG | 3 cut(s) | 378, 977, 2159 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2243 |
| BseBI | CCWGG | 2 cut(s) | 1202, 1750 |
| BseDI | CCNNGG | 8 cut(s) | 244, 436, 576, 582, 684, 888, 1749, 2142 |
| BseJI | GATNNNNATC | 1 cut(s) | 2243 |
| BseMI | GCAATG | 3 cut(s) | 378, 977, 2159 |
| BseMII | CTCAG | 6 cut(s) | 1680, 2043, 2049, 2489, 2613, 2731 |
| BseNI | ACTGG | 5 cut(s) | 463, 734, 1035, 2482, 2562 |
| BseRI | GAGGAG | 1 cut(s) | 1815 |
| BseSI | GKGCMC | 2 cut(s) | 796, 1299 |
| BseYI | CCCAGC | 1 cut(s) | 343 |
| BsgI | GTGCAG | 2 cut(s) | 236, 244 |
| BshFI | GGCC | 7 cut(s) | 53, 181, 581, 887, 1103, 1200, 1470 |
| BshNI | GGYRCC | 1 cut(s) | 203 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1585, 2433, 2718 |
| BsiHKCI | CYCGRG | 1 cut(s) | 553 |
| BsiSI | CCGG | 4 cut(s) | 46, 106, 183, 244 |
| BslFI | GGGAC | 1 cut(s) | 570 |
| BsmAI | GTCTC | 3 cut(s) | 2038, 2490, 2739 |
| BsmFI | GGGAC | 1 cut(s) | 570 |
| BsmI | GAATGC | 3 cut(s) | 918, 1914, 2595 |
| BsnI | GGCC | 7 cut(s) | 53, 181, 581, 887, 1103, 1200, 1470 |
| Bso31I | GGTCTC | 1 cut(s) | 2739 |
| BsoBI | CYCGRG | 1 cut(s) | 553 |
| Bsp1286I | GDGCHC | 5 cut(s) | 796, 1299, 1585, 2433, 2718 |
| Bsp19I | CCATGG | 4 cut(s) | 436, 576, 684, 888 |
| BspACI | CCGC | 3 cut(s) | 71, 151, 201 |
| BspANI | GGCC | 7 cut(s) | 53, 181, 581, 887, 1103, 1200, 1470 |
| BspCNI | CTCAG | 6 cut(s) | 1681, 2042, 2048, 2488, 2614, 2730 |
| BspHI | TCATGA | 3 cut(s) | 1486, 2338, 2731 |
| BspLI | GGNNCC | 7 cut(s) | 205, 224, 464, 682, 886, 2119, 2619 |
| BspMAI | CTGCAG | 2 cut(s) | 930, 2393 |
| BspMI | ACCTGC | 3 cut(s) | 465, 933, 1657 |
| BspOI | GCTAGC | 1 cut(s) | 216 |
| BspPI | GGATC | 9 cut(s) | 37, 106, 424, 675, 688, 805, 856, 980, 2239 |
| BspQI | GCTCTTC | 1 cut(s) | 2010 |
| BspT107I | GGYRCC | 1 cut(s) | 203 |
| BspTI | CTTAAG | 1 cut(s) | 139 |
| BspTNI | GGTCTC | 1 cut(s) | 2739 |
| BsrBI | CCGCTC | 1 cut(s) | 153 |
| BsrDI | GCAATG | 3 cut(s) | 378, 977, 2159 |
| BsrI | ACTGG | 5 cut(s) | 463, 734, 1035, 2482, 2562 |
| BssECI | CCNNGG | 8 cut(s) | 244, 436, 576, 582, 684, 888, 1749, 2142 |
| BssNI | GRCGYC | 2 cut(s) | 125, 204 |
| BssSI | CACGAG | 1 cut(s) | 1823 |
| BssT1I | CCWWGG | 6 cut(s) | 436, 576, 582, 684, 888, 2142 |
| Bst2BI | CACGAG | 1 cut(s) | 1823 |
| Bst2UI | CCWGG | 2 cut(s) | 1202, 1750 |
| Bst4CI | ACNGT | 7 cut(s) | 60, 362, 833, 876, 1766, 2259, 2538 |
| Bst6I | CTCTTC | 6 cut(s) | 272, 894, 1975, 2002, 2010, 2568 |
| BstACI | GRCGYC | 2 cut(s) | 125, 204 |
| BstAFI | CTTAAG | 1 cut(s) | 139 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 301, 1303 |
| BstC8I | GCNNGC | 6 cut(s) | 214, 241, 823, 1434, 1452, 2433 |
| BstDEI | CTNAG | 9 cut(s) | 815, 1113, 1689, 1894, 2029, 2035, 2475, 2622, 2717 |
| BstDSI | CCRYGG | 4 cut(s) | 436, 576, 684, 888 |
| BstEII | GGTNACC | 1 cut(s) | 101 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 139, 958 |
| BstH2I | RGCGCY | 1 cut(s) | 207 |
| BstHHI | GCGC | 3 cut(s) | 206, 295, 349 |
| BstMAI | GTCTC | 3 cut(s) | 2038, 2490, 2739 |
| BstNI | CCWGG | 2 cut(s) | 1202, 1750 |
| BstNSI | RCATGY | 2 cut(s) | 727, 1073 |
| BstPI | GGTNACC | 1 cut(s) | 101 |
| BstSCI | CCNGG | 6 cut(s) | 45, 105, 181, 243, 1200, 1748 |
| BstSFI | CTRYAG | 4 cut(s) | 378, 926, 1137, 2389 |
| BstSLI | GKGCMC | 2 cut(s) | 796, 1299 |
| BstV2I | GAAGAC | 4 cut(s) | 170, 1011, 2142, 2373 |
| BstX2I | RGATCY | 6 cut(s) | 42, 111, 568, 680, 810, 861 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 583, 895 |
| BstYI | RGATCY | 6 cut(s) | 42, 111, 568, 680, 810, 861 |
| BsuI | GTATCC | 5 cut(s) | 418, 1369, 1630, 1708, 2470 |
| BsuRI | GGCC | 7 cut(s) | 53, 181, 581, 887, 1103, 1200, 1470 |
| BtgI | CCRYGG | 4 cut(s) | 436, 576, 684, 888 |
| BtgZI | GCGATG | 1 cut(s) | 134 |
| BtrI | CACGTC | 2 cut(s) | 198, 2605 |
| BtsI | GCAGTG | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 3 cut(s) | 253, 654, 2725 |
| BveI | ACCTGC | 3 cut(s) | 465, 933, 1657 |
| Cac8I | GCNNGC | 6 cut(s) | 214, 241, 823, 1434, 1452, 2433 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2219, 2488 |
| CciI | TCATGA | 3 cut(s) | 1486, 2338, 2731 |
| CfoI | GCGC | 3 cut(s) | 206, 295, 349 |
| Cfr13I | GGNCC | 6 cut(s) | 180, 885, 1102, 1198, 1444, 2479 |
| CseI | GACGC | 3 cut(s) | 82, 133, 2009 |
| Csp6I | GTAC | 6 cut(s) | 727, 1686, 1707, 2042, 2066, 2344 |
| CviQI | GTAC | 6 cut(s) | 727, 1686, 1707, 2042, 2066, 2344 |
| DdeI | CTNAG | 9 cut(s) | 815, 1113, 1689, 1894, 2029, 2035, 2475, 2622, 2717 |
| DinI | GGCGCC | 1 cut(s) | 205 |
| DraI | TTTAAA | 1 cut(s) | 880 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 130 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 6 cut(s) | 272, 894, 1975, 2002, 2010, 2568 |
| EarI | CTCTTC | 6 cut(s) | 272, 894, 1975, 2002, 2010, 2568 |
| Ecl136II | GAGCTC | 1 cut(s) | 2431 |
| Eco130I | CCWWGG | 6 cut(s) | 436, 576, 582, 684, 888, 2142 |
| Eco24I | GRGCYC | 1 cut(s) | 2433 |
| Eco31I | GGTCTC | 1 cut(s) | 2739 |
| Eco47I | GGWCC | 2 cut(s) | 1444, 2479 |
| Eco53kI | GAGCTC | 1 cut(s) | 2431 |
| Eco57I | CTGAAG | 2 cut(s) | 921, 2592 |
| Eco88I | CYCGRG | 1 cut(s) | 553 |
| Eco91I | GGTNACC | 1 cut(s) | 101 |
| EcoICRI | GAGCTC | 1 cut(s) | 2431 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 139, 958 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1444 |
| EcoO65I | GGTNACC | 1 cut(s) | 101 |
| EcoRI | GAATTC | 2 cut(s) | 2307, 2597 |
| EcoRII | CCWGG | 2 cut(s) | 1200, 1748 |
| EcoT14I | CCWWGG | 6 cut(s) | 436, 576, 582, 684, 888, 2142 |
| EcoT22I | ATGCAT | 1 cut(s) | 388 |
| EcoT38I | GRGCYC | 1 cut(s) | 2433 |
| EgeI | GGCGCC | 1 cut(s) | 205 |
| EheI | GGCGCC | 1 cut(s) | 205 |
| ErhI | CCWWGG | 6 cut(s) | 436, 576, 582, 684, 888, 2142 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1034, 1066, 2193, 2225 |
| FaqI | GGGAC | 1 cut(s) | 570 |
| FauNDI | CATATG | 3 cut(s) | 945, 1869, 2757 |
| FbaI | TGATCA | 1 cut(s) | 2059 |
| FblI | GTMKAC | 2 cut(s) | 14, 1369 |
| FriOI | GRGCYC | 1 cut(s) | 2433 |
| FspBI | CTAG | 8 cut(s) | 116, 213, 447, 483, 983, 1977, 2319, 2586 |
| FspI | TGCGCA | 1 cut(s) | 294 |
| GlaI | GCGC | 3 cut(s) | 205, 294, 348 |
| GsaI | CCCAGC | 1 cut(s) | 347 |
| HaeII | RGCGCY | 1 cut(s) | 207 |
| HaeIII | GGCC | 7 cut(s) | 53, 181, 581, 887, 1103, 1200, 1470 |
| HapII | CCGG | 4 cut(s) | 46, 106, 183, 244 |
| HgaI | GACGC | 3 cut(s) | 82, 133, 2009 |
| HhaI | GCGC | 3 cut(s) | 206, 295, 349 |
| Hin1I | GRCGYC | 2 cut(s) | 125, 204 |
| Hin6I | GCGC | 3 cut(s) | 204, 293, 347 |
| HinP1I | GCGC | 3 cut(s) | 204, 293, 347 |
| HincII | GTYRAC | 3 cut(s) | 15, 480, 721 |
| HindII | GTYRAC | 3 cut(s) | 15, 480, 721 |
| HindIII | AAGCTT | 3 cut(s) | 513, 933, 2467 |
| HinfI | GANTC | 6 cut(s) | 902, 1171, 1351, 1396, 1828, 2289 |
| HpaII | CCGG | 4 cut(s) | 46, 106, 183, 244 |
| HphI | GGTGA | 8 cut(s) | 113, 286, 610, 1013, 1358, 1846, 2091, 2303 |
| Hpy166II | GTNNAC | 6 cut(s) | 15, 480, 721, 922, 1370, 2723 |
| Hpy188I | TCNGA | 9 cut(s) | 98, 157, 286, 940, 972, 1128, 1592, 2288, 2306 |
| Hpy8I | GTNNAC | 6 cut(s) | 15, 480, 721, 922, 1370, 2723 |
| Hpy99I | CGWCG | 6 cut(s) | 19, 98, 133, 196, 199, 2606 |
| HpyCH4III | ACNGT | 7 cut(s) | 60, 362, 833, 876, 1766, 2259, 2538 |
| HpyCH4IV | ACGT | 2 cut(s) | 197, 2604 |
| HpyF3I | CTNAG | 9 cut(s) | 815, 1113, 1689, 1894, 2029, 2035, 2475, 2622, 2717 |
| HpySE526I | ACGT | 2 cut(s) | 197, 2604 |
| Hsp92I | GRCGYC | 2 cut(s) | 125, 204 |
| HspAI | GCGC | 3 cut(s) | 204, 293, 347 |
| KasI | GGCGCC | 1 cut(s) | 203 |
| Ksp22I | TGATCA | 1 cut(s) | 2059 |
| LguI | GCTCTTC | 1 cut(s) | 2010 |
| LweI | GCATC | 3 cut(s) | 373, 1395, 2449 |
| MaeI | CTAG | 8 cut(s) | 116, 213, 447, 483, 983, 1977, 2319, 2586 |
| MaeII | ACGT | 2 cut(s) | 197, 2604 |
| MaeIII | GTNAC | 3 cut(s) | 101, 1531, 2656 |
| MbiI | CCGCTC | 1 cut(s) | 153 |
| MfeI | CAATTG | 1 cut(s) | 2165 |
| MflI | RGATCY | 6 cut(s) | 42, 111, 568, 680, 810, 861 |
| MhlI | GDGCHC | 5 cut(s) | 796, 1299, 1585, 2433, 2718 |
| Mly113I | GGCGCC | 1 cut(s) | 204 |
| MlyI | GAGTC | 2 cut(s) | 911, 2283 |
| MmeI | TCCRAC | 4 cut(s) | 76, 852, 950, 1737 |
| Mph1103I | ATGCAT | 1 cut(s) | 388 |
| MroXI | GAANNNNTTC | 4 cut(s) | 628, 1846, 2183, 2226 |
| MseI | TTAA | 8 cut(s) | 140, 837, 879, 1332, 1782, 2112, 2373, 2502 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1868, 1872 |
| MspA1I | CMGCKG | 1 cut(s) | 1853 |
| MspCI | CTTAAG | 1 cut(s) | 139 |
| MspI | CCGG | 4 cut(s) | 46, 106, 183, 244 |
| MspR9I | CCNGG | 6 cut(s) | 47, 107, 183, 245, 1202, 1750 |
| MunI | CAATTG | 1 cut(s) | 2165 |
| Mva1269I | GAATGC | 3 cut(s) | 918, 1914, 2595 |
| MvaI | CCWGG | 2 cut(s) | 1202, 1750 |
| NarI | GGCGCC | 1 cut(s) | 204 |
| NciI | CCSGG | 4 cut(s) | 47, 107, 183, 245 |
| NcoI | CCATGG | 4 cut(s) | 436, 576, 684, 888 |
| NdeI | CATATG | 3 cut(s) | 945, 1869, 2757 |
| NheI | GCTAGC | 1 cut(s) | 212 |
| NlaIV | GGNNCC | 7 cut(s) | 205, 224, 464, 682, 886, 2119, 2619 |
| NmeAIII | GCCGAG | 1 cut(s) | 157 |
| NmuCI | GTSAC | 3 cut(s) | 101, 1531, 2656 |
| NsbI | TGCGCA | 1 cut(s) | 294 |
| NsiI | ATGCAT | 1 cut(s) | 388 |
| NspI | RCATGY | 2 cut(s) | 727, 1073 |
| PagI | TCATGA | 3 cut(s) | 1486, 2338, 2731 |
| PciI | ACATGT | 1 cut(s) | 723 |
| PciSI | GCTCTTC | 1 cut(s) | 2010 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 184, 226 |
| PctI | GAATGC | 3 cut(s) | 918, 1914, 2595 |
| PdmI | GAANNNNTTC | 4 cut(s) | 628, 1846, 2183, 2226 |
| PfeI | GAWTC | 4 cut(s) | 1171, 1351, 1396, 1828 |
| PflFI | GACNNNGTC | 1 cut(s) | 127 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2075, 2488 |
| PleI | GAGTC | 2 cut(s) | 910, 2283 |
| PluTI | GGCGCC | 1 cut(s) | 207 |
| PpsI | GAGTC | 2 cut(s) | 910, 2283 |
| PpuMI | RGGWCCY | 1 cut(s) | 1444 |
| PscI | ACATGT | 1 cut(s) | 723 |
| Psp124BI | GAGCTC | 1 cut(s) | 2433 |
| Psp5II | RGGWCCY | 1 cut(s) | 1444 |
| Psp6I | CCWGG | 2 cut(s) | 1200, 1748 |
| PspEI | GGTNACC | 1 cut(s) | 101 |
| PspFI | CCCAGC | 1 cut(s) | 343 |
| PspGI | CCWGG | 2 cut(s) | 1200, 1748 |
| PspN4I | GGNNCC | 7 cut(s) | 205, 224, 464, 682, 886, 2119, 2619 |
| PspPI | GGNCC | 6 cut(s) | 180, 885, 1102, 1198, 1444, 2479 |
| PspPPI | RGGWCCY | 1 cut(s) | 1444 |
| PstI | CTGCAG | 2 cut(s) | 930, 2393 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2219, 2488 |
| PsuI | RGATCY | 6 cut(s) | 42, 111, 568, 680, 810, 861 |
| PsyI | GACNNNGTC | 1 cut(s) | 127 |
| PvuII | CAGCTG | 1 cut(s) | 1853 |
| RsaI | GTAC | 6 cut(s) | 728, 1687, 1708, 2043, 2067, 2345 |
| RsaNI | GTAC | 6 cut(s) | 727, 1686, 1707, 2042, 2066, 2344 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1868, 1872 |
| SacI | GAGCTC | 1 cut(s) | 2433 |
| SalI | GTCGAC | 1 cut(s) | 13 |
| SapI | GCTCTTC | 1 cut(s) | 2010 |
| SaqAI | TTAA | 8 cut(s) | 140, 837, 879, 1332, 1782, 2112, 2373, 2502 |
| Sau96I | GGNCC | 6 cut(s) | 180, 885, 1102, 1198, 1444, 2479 |
| SbfI | CCTGCAGG | 1 cut(s) | 930 |
| SchI | GAGTC | 2 cut(s) | 911, 2283 |
| ScrFI | CCNGG | 6 cut(s) | 47, 107, 183, 245, 1202, 1750 |
| SdaI | CCTGCAGG | 1 cut(s) | 930 |
| SduI | GDGCHC | 5 cut(s) | 796, 1299, 1585, 2433, 2718 |
| SfaNI | GCATC | 3 cut(s) | 373, 1395, 2449 |
| SfcI | CTRYAG | 4 cut(s) | 378, 926, 1137, 2389 |
| SfoI | GGCGCC | 1 cut(s) | 205 |
| SinI | GGWCC | 2 cut(s) | 1444, 2479 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1868, 1872 |
| SmlI | CTYRAG | 6 cut(s) | 139, 596, 907, 1106, 1472, 2231 |
| SmoI | CTYRAG | 6 cut(s) | 139, 596, 907, 1106, 1472, 2231 |
| SpeI | ACTAGT | 1 cut(s) | 446 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 930 |
| SsiI | CCGC | 3 cut(s) | 71, 151, 201 |
| SspDI | GGCGCC | 1 cut(s) | 203 |
| SspI | AATATT | 1 cut(s) | 1321 |
| SspMI | CTAG | 8 cut(s) | 116, 213, 447, 483, 983, 1977, 2319, 2586 |
| SstI | GAGCTC | 1 cut(s) | 2433 |
| StyD4I | CCNGG | 6 cut(s) | 45, 105, 181, 243, 1200, 1748 |
| StyI | CCWWGG | 6 cut(s) | 436, 576, 582, 684, 888, 2142 |
| TaaI | ACNGT | 7 cut(s) | 60, 362, 833, 876, 1766, 2259, 2538 |
| TaiI | ACGT | 2 cut(s) | 200, 2607 |
| TaqI | TCGA | 5 cut(s) | 14, 38, 2005, 2292, 2601 |
| TatI | WGTACW | 3 cut(s) | 726, 1706, 2343 |
| TauI | GCSGC | 3 cut(s) | 74, 153, 204 |
| TfiI | GAWTC | 4 cut(s) | 1171, 1351, 1396, 1828 |
| Tru1I | TTAA | 8 cut(s) | 140, 837, 879, 1332, 1782, 2112, 2373, 2502 |
| Tru9I | TTAA | 8 cut(s) | 140, 837, 879, 1332, 1782, 2112, 2373, 2502 |
| TscAI | CASTG | 3 cut(s) | 260, 654, 2725 |
| TseFI | GTSAC | 3 cut(s) | 101, 1531, 2656 |
| Tsp45I | GTSAC | 3 cut(s) | 101, 1531, 2656 |
| TspGWI | ACGGA | 2 cut(s) | 218, 235 |
| TspRI | CASTG | 3 cut(s) | 260, 654, 2725 |
| Tth111I | GACNNNGTC | 1 cut(s) | 127 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2075, 2488 |
| Vha464I | CTTAAG | 1 cut(s) | 139 |
| VpaK11BI | GGWCC | 2 cut(s) | 1444, 2479 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 139, 958 |
| XapI | RAATTY | 6 cut(s) | 763, 1079, 1906, 1998, 2307, 2597 |
| XceI | RCATGY | 2 cut(s) | 727, 1073 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2164 |
| XmiI | GTMKAC | 2 cut(s) | 14, 1369 |
| XmnI | GAANNNNTTC | 4 cut(s) | 628, 1846, 2183, 2226 |
| XspI | CTAG | 8 cut(s) | 116, 213, 447, 483, 983, 1977, 2319, 2586 |
| Zsp2I | ATGCAT | 1 cut(s) | 388 |