Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001727

Physical Location & Seq

Genomic Coordinates Reverse (-)

55362579 .. 55366684

Gene Structure 4106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G032650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2877 bp

ATGGCGAAGAGATCAGATTTTGCGCAAAAGCTGCTTGATGATCTTCGGGTTAGGAAGGAACGAATGGCTGCACCAGCGCAGAGCTCAAACCGTTCAAACGCAATGGCTATAGATGCATATGCTTATTCCAAGCAAACTTATAGAGGATCAAGGGATACAAAAACCCATGGAATAACTAGTTCCAGAACTGGGAACCCCCAGAGCAGGTCAACTGGAAGTAGTAGAACACCTATTCGTCAAGAAGCTTCAAACCAGATGGTTGCTTATGGGAGAGGTGGGAACTCAGGACAAATAGTAGATCTTTCCATGGCATTGGCTTTTGCACTTGAGAATGGAGCCACAAAACTCACCAGAACAAGTTCATCAAGCAAAAGTTCAGTGATGGGGTTTCTGAATCAAATTGGTAGGGGATCCATGGACTTCAAAAAAATGGAAAGAAAGGGAAATGTCAACATGTACTGGGGTTCAAGTAGTCAGTTCCCTAACCTTTCAAATTTCCATATAGAAGAAATATCCAGAGGGGCACAGAAACTAAACCAGATCCTTAGAGCTTGCTCCAATGGTGTTAATGTTGATAAGTTTTCAATAGAGATCGGGAAGGAACTGTTTAAAGGGGCCATGGATTTGGAAGAGTCCTTGAGAATGCTTGTGAACCTGCAGGAAGCTTCAGAACATATGACCACGTCCCAAAGGAAAAGTCGGATCACATTGCTAGACGAAGATGAAGATGGTGAAGACCAAATAGAAGAACAAAAGCAATTGGCTCTGCCAAGGTTTTCCTTTGACAAATCAACAAGACATGCTAGTAAAATCCAAGAAGTAGGAAGGATGGCCCTCAAGCCTAAGATGGCAGCTCTGACTTACCCCACAGGAGGTAGTACGGATGAGAAGCAAGGCAGAGAGACAGCAACCTCAGTTTCTCGCAGGCATTCAGTCAGCTATATCCCTGATGTCAAAAATCCATCAAAACGGTCAGACCAGAAAGTGTCTAAACCAGAAAAAGATAGGATTCCAAATGTTATTGCAAAGCTGATGGGCCTGGATGAGCTTCCCAAAAATGAAAACGCAAAATCCACTACCACACAGAAAGACAACATCCCCAAGAAACCAAGAGAAAGGGGAGCTGCAATAGGGCACACAATGCAGGAAAGCAGTAAGATTGCTGGTGTTAAGACCAAAGATGGTGAGAATCTGGTATCCACAAGTAGACAGAAAGTGGTAGAAGGCAATAAGAATCCATTGATGCAGAAAAACACTGCTTTTCTTCTGCAAGCAGAAAAGGTCCTGCCTGCCAACAACAATGTTGGCCTTGCGATGGTTATTCATGATGGAAAACAATCCTCAAAAGACTTGATGGGAATAAAACCTGTGACAAGATCAGGAAAGACAACCACCGTGAAAACAGATAAGCAGCAAAGTGACCAATTCAGACAGAACAGCAGTAAGAATAATCACGAAAGAGAAAGAAAGCAGGATACTATGAGGTATGGGGAACAAAAGTTGCAGGTAAGAAAACAACAAGATACTGAGATGGTATCCAAGAGTACATCCAACAAGGCAGCAAAGCAGCCTCACACAAGCCAAGCCAGGGTAAATAGAAACAGTATGATAGAAGTTGTTAATGCCGTGCAACCCAGAGGAGTTCCAAATGGCACTTACCACGAGAATCTGGTGAGAAGAAAAAGTTCAGCTGAATTGAACATCCATATGAATGATTTTCCTCAAAAGGACTCAGATCAAGAAAATTTAGGCATTCCACCAGCTATGAAGGAGAAAGCTGTTCATCATGTAGCACCCTTACAGAAGGCAAAAACTAGAAGAGTGGATGAAGTAGTGACCAGAAGAAATGGAACGCTGAATAAGTTGACAAGGCCACCAAAACAATCTATTTTGGAGCAAGTGACACATAGAACCCATGATAAAGTCAGTGGCCACAGTGGAGCAGAAAAGGGTAGAGCCAGCAGGTTGAAACAAGCAGAGCCACGCATAGTCAAGTCCAACAAATCAACAGAAAGCAGTACTCGACCACTACATTTGGTACAGAACCTACAGAAAGAAGCTGAGGCTGCTATTTTCTATGGTCACAATGAAGACGAATTCCGAAGCCTCCGAGAACCAAAAACTCTAGTCCCACATGACAGTCGTCAAAACTCAGTCTCAGTAGTACCTAACGATCAACATGATCAAATACCAAACTTTGGAGCTGATGAGTGCATTACGTCACTTAATGGAACCCAATCAACCCATGAAGACACCTTGGATATTTCATCCACATTGCAATTGGAGCAACAGAAGGCTTTCAAATGGAGAAAACAAGAGCCACTTAGAGAAACTGAAATCCTTCTCAAGCAGATAGTGATCCAGAGCCAACTGTTCCTCAACACAGCAGAGGCACTTTTCAGACTCGAAATCCCTTTCGGAATTCTCCACGCTAGTAGTAGCGACTACGATCACGAGTACAAGTACATCACTCATCCCGAAGACATTAAGCTCACATTAGACTGCAGCTACGAGATAATGAAAAGAAAAGGTAAAAGGCAAGAGCTCGCTGTGCATCCCAATTTTGTGAAGGTATCCATAAGCTTCACTCAGGTCCAGTCTCTGGATGAGCTGGTTAAGCAGTTGAGTAAAGACATTGACAAGCTGAAACTGTATGGGAAGAATGGAAAACTGGAATGTGGGGTTGAAGAGTATGTGCCTAGAATGCTTGAGTTCGACGTGAATAACAGGGAGCCTGAGCTGAATTGTATGTGGGATTTGGGTTGGGATGTGACCATGTTTGGGTTTGTTGAAGTGGATGAAGTTGTGAGGGATTTGGAGAGGGGTGTGCTCAGTGGACTTGTTGATGAGCTTACCAGAGACCTCTTTCATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VARLMGL

Protein Analysis

958

Amino Acids

107.96

Weight (kDa)

9.41

Isoelectric Point (pI)

45.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001727)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42710 AT5G42710 AT5G42710
fragaria_vesca	FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870
malus_domestica	MD08G1035200.v1.1 MD15G1031800.v1.1
prunus_persica	Prupe.1G380200_v2.0.a1
pyrus_communis	pycom08g02780 pycom15g02750
rosa_chinensis	RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941
rosa_laevigata	RLG00000011289 RLG00000034832 RLG00000034833
rosa_multiflora	Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003
rosa_roxburghii	Rroxscaffold_1G00028100 Rroxscaffold_7G00167300
rosa_rugosa	Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700
rosa_samantha	Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300
rosa_wichuraiana	Rw5G032650 Rw5G032690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	24
Acc36I	ACCTGC	4 cut(s)	195, 663, 1495, 1953
AccB7I	CCANNNNNTGG	2 cut(s)	2198, 2602
AccI	GTMKAC	1 cut(s)	1207
AclWI	GGATC	6 cut(s)	154, 405, 418, 535, 710, 2353
AcoI	YGGCCR	1 cut(s)	1930
AcsI	RAATTY	4 cut(s)	493, 1744, 2096, 2421
AcuI	CTGAAG	1 cut(s)	651
AfaI	GTAC	8 cut(s)	458, 880, 1546, 2020, 2040, 2166, 2459, 2465
AfiI	CCNNNNNNNGG	8 cut(s)	189, 204, 872, 1315, 1588, 2198, 2602, 2781
AflIII	ACRYGT	1 cut(s)	453
AhlI	ACTAGT	1 cut(s)	176
AjiI	CACGTC	2 cut(s)	684, 2719
AjnI	CCWGG	2 cut(s)	1038, 1586
Alw21I	GWGCWC	3 cut(s)	86, 2547, 2832
Alw26I	GTCTC	4 cut(s)	896, 2161, 2604, 2853
AlwI	GGATC	6 cut(s)	154, 405, 418, 535, 710, 2353
AlwNI	CAGNNNCTG	1 cut(s)	2602
AoxI	GGCC	6 cut(s)	615, 831, 1036, 1306, 1871, 1930
ApeKI	GCWGC	9 cut(s)	31, 68, 851, 1124, 1411, 1559, 1567, 2066, 2505
ApoI	RAATTY	4 cut(s)	493, 1744, 2096, 2421
ArsI	GACNNNNNNTTYG	2 cut(s)	682, 714
Asp700I	GAANNNNTTC	4 cut(s)	358, 1684, 2297, 2340
AspLEI	GCGC	2 cut(s)	25, 79
AspS9I	GGNCC	5 cut(s)	615, 832, 1036, 1282, 2593
AsuHPI	GGTGA	4 cut(s)	340, 743, 1196, 1684
AvaII	GGWCC	2 cut(s)	1282, 2593
BaeGI	GKGCMC	2 cut(s)	526, 1137
BalI	TGGCCA	1 cut(s)	1932
BamHI	GGATCC	1 cut(s)	410
BanII	GRGCYC	2 cut(s)	86, 2547
BauI	CACGAG	2 cut(s)	1661, 2453
BbsI	GAAGAC	4 cut(s)	741, 2097, 2256, 2487
Bbv12I	GWGCWC	3 cut(s)	86, 2547, 2832
BbvCI	CCTCAGC	1 cut(s)	2061
BbvI	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 2053, 2517
BceAI	ACGGC	1 cut(s)	1610
BciT130I	CCWGG	2 cut(s)	1040, 1588
BciVI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2584
BclI	TGATCA	1 cut(s)	2182
BcoDI	GTCTC	4 cut(s)	896, 2161, 2604, 2853
BcuI	ACTAGT	1 cut(s)	176
BfaI	CTAG	7 cut(s)	177, 713, 804, 1815, 2126, 2433, 2700
BfmI	CTRYAG	4 cut(s)	108, 656, 2048, 2503
BfuAI	ACCTGC	4 cut(s)	195, 663, 1495, 1953
BfuI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2584
BglII	AGATCT	1 cut(s)	298
BisI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 2067, 2506
BlsI	GCNGC	9 cut(s)	33, 70, 853, 1126, 1413, 1561, 1569, 2068, 2507
BmcAI	AGTACT	1 cut(s)	2020
Bme1390I	CCNGG	2 cut(s)	1040, 1588
Bme18I	GGWCC	2 cut(s)	1282, 2593
BmgBI	CACGTC	2 cut(s)	684, 2719
BmgT120I	GGNCC	5 cut(s)	615, 832, 1036, 1282, 2593
BmiI	GGNNCC	6 cut(s)	194, 337, 412, 616, 2233, 2733
BmrFI	CCNGG	2 cut(s)	1040, 1588
BmrI	ACTGGG	2 cut(s)	198, 469
BmsI	GCATC	3 cut(s)	103, 1233, 2563
BmuI	ACTGGG	2 cut(s)	198, 469
BoxI	GACNNNNGTC	1 cut(s)	2142
BpiI	GAAGAC	4 cut(s)	741, 2097, 2256, 2487
Bpu10I	CCTNAGC	2 cut(s)	2061, 2736
BpuEI	CTTGAG	5 cut(s)	347, 658, 821, 2330, 2729
BsaBI	GATNNNNATC	1 cut(s)	2357
BsaI	GGTCTC	1 cut(s)	2853
BsaJI	CCNNGG	7 cut(s)	166, 306, 414, 618, 770, 1587, 2256
Bsc4I	CCNNNNNNNGG	8 cut(s)	189, 204, 872, 1315, 1588, 2198, 2602, 2781
Bse1I	ACTGG	5 cut(s)	193, 217, 464, 2596, 2676
Bse3DI	GCAATG	3 cut(s)	108, 707, 2273
Bse8I	GATNNNNATC	1 cut(s)	2357
BseBI	CCWGG	2 cut(s)	1040, 1588
BseDI	CCNNGG	7 cut(s)	166, 306, 414, 618, 770, 1587, 2256
BseJI	GATNNNNATC	1 cut(s)	2357
BseLI	CCNNNNNNNGG	8 cut(s)	189, 204, 872, 1315, 1588, 2198, 2602, 2781
BseMI	GCAATG	3 cut(s)	108, 707, 2273
BseNI	ACTGG	5 cut(s)	193, 217, 464, 2596, 2676
BseRI	GAGGAG	1 cut(s)	1653
BseSI	GKGCMC	2 cut(s)	526, 1137
BseXI	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 2053, 2517
BsgI	GTGCAG	1 cut(s)	54
BshFI	GGCC	6 cut(s)	617, 833, 1038, 1308, 1873, 1932
BsiHKAI	GWGCWC	3 cut(s)	86, 2547, 2832
BslFI	GGGAC	2 cut(s)	670, 2114
BslI	CCNNNNNNNGG	8 cut(s)	189, 204, 872, 1315, 1588, 2198, 2602, 2781
BsmAI	GTCTC	4 cut(s)	896, 2161, 2604, 2853
BsmFI	GGGAC	2 cut(s)	670, 2114
BsmI	GAATGC	4 cut(s)	648, 928, 1752, 2709
BsnI	GGCC	6 cut(s)	617, 833, 1038, 1308, 1873, 1932
Bso31I	GGTCTC	1 cut(s)	2853
Bsp1286I	GDGCHC	5 cut(s)	86, 526, 1137, 2547, 2832
Bsp19I	CCATGG	4 cut(s)	166, 306, 414, 618
BspANI	GGCC	6 cut(s)	617, 833, 1038, 1308, 1873, 1932
BspHI	TCATGA	1 cut(s)	1324
BspLI	GGNNCC	6 cut(s)	194, 337, 412, 616, 2233, 2733
BspMAI	CTGCAG	2 cut(s)	660, 2507
BspMI	ACCTGC	4 cut(s)	195, 663, 1495, 1953
BspPI	GGATC	6 cut(s)	154, 405, 418, 535, 710, 2353
BspTNI	GGTCTC	1 cut(s)	2853
BsrDI	GCAATG	3 cut(s)	108, 707, 2273
BsrI	ACTGG	5 cut(s)	193, 217, 464, 2596, 2676
BssECI	CCNNGG	7 cut(s)	166, 306, 414, 618, 770, 1587, 2256
BssSI	CACGAG	2 cut(s)	1661, 2453
BssT1I	CCWWGG	6 cut(s)	166, 306, 414, 618, 770, 2256
Bst2BI	CACGAG	2 cut(s)	1661, 2453
Bst2UI	CCWGG	2 cut(s)	1040, 1588
Bst4CI	ACNGT	9 cut(s)	92, 606, 972, 1396, 1604, 1937, 2141, 2373, 2652
Bst6I	CTCTTC	4 cut(s)	2, 624, 1813, 2682
BstAPI	GCANNNNNTGC	2 cut(s)	31, 1141
BstC8I	GCNNGC	6 cut(s)	553, 926, 1272, 1290, 1960, 2547
BstDSI	CCRYGG	4 cut(s)	166, 306, 414, 618
BstHHI	GCGC	2 cut(s)	25, 79
BstMAI	GTCTC	4 cut(s)	896, 2161, 2604, 2853
BstMWI	GCNNNNNNNGC	9 cut(s)	31, 74, 113, 1141, 2066, 2284, 2551, 2617, 2704
BstNI	CCWGG	2 cut(s)	1040, 1588
BstNSI	RCATGY	2 cut(s)	457, 803
BstPAI	GACNNNNGTC	1 cut(s)	2142
BstSCI	CCNGG	2 cut(s)	1038, 1586
BstSFI	CTRYAG	4 cut(s)	108, 656, 2048, 2503
BstSLI	GKGCMC	2 cut(s)	526, 1137
BstV1I	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 2053, 2517
BstV2I	GAAGAC	4 cut(s)	741, 2097, 2256, 2487
BstX2I	RGATCY	3 cut(s)	298, 410, 540
BstXI	CCANNNNNNTGG	2 cut(s)	313, 625
BstYI	RGATCY	3 cut(s)	298, 410, 540
BsuI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2584
BsuRI	GGCC	6 cut(s)	617, 833, 1038, 1308, 1873, 1932
BtgI	CCRYGG	4 cut(s)	166, 306, 414, 618
BtgZI	GCGATG	1 cut(s)	1328
BtrI	CACGTC	2 cut(s)	684, 2719
BtsI	GCAGTG	1 cut(s)	1254
BtsIMutI	CAGTG	5 cut(s)	384, 1254, 1933, 1942, 2839
BveI	ACCTGC	4 cut(s)	195, 663, 1495, 1953
Cac8I	GCNNGC	6 cut(s)	553, 926, 1272, 1290, 1960, 2547
CaiI	CAGNNNCTG	1 cut(s)	2602
CciI	TCATGA	1 cut(s)	1324
CfoI	GCGC	2 cut(s)	25, 79
Cfr13I	GGNCC	5 cut(s)	615, 832, 1036, 1282, 2593
Csp6I	GTAC	8 cut(s)	457, 879, 1545, 2019, 2039, 2165, 2458, 2464
CspCI	CAANNNNNGTGG	2 cut(s)	2016, 2051
CviQI	GTAC	8 cut(s)	457, 879, 1545, 2019, 2039, 2165, 2458, 2464
DraI	TTTAAA	1 cut(s)	610
EaeI	YGGCCR	1 cut(s)	1930
Eam1104I	CTCTTC	4 cut(s)	2, 624, 1813, 2682
EarI	CTCTTC	4 cut(s)	2, 624, 1813, 2682
Ecl136II	GAGCTC	2 cut(s)	84, 2545
Eco130I	CCWWGG	6 cut(s)	166, 306, 414, 618, 770, 2256
Eco24I	GRGCYC	2 cut(s)	86, 2547
Eco31I	GGTCTC	1 cut(s)	2853
Eco47I	GGWCC	2 cut(s)	1282, 2593
Eco53kI	GAGCTC	2 cut(s)	84, 2545
Eco57I	CTGAAG	1 cut(s)	651
EcoICRI	GAGCTC	2 cut(s)	84, 2545
EcoO109I	RGGNCCY	1 cut(s)	1282
EcoRI	GAATTC	2 cut(s)	2096, 2421
EcoRII	CCWGG	2 cut(s)	1038, 1586
EcoT14I	CCWWGG	6 cut(s)	166, 306, 414, 618, 770, 2256
EcoT22I	ATGCAT	1 cut(s)	118
EcoT38I	GRGCYC	2 cut(s)	86, 2547
ErhI	CCWWGG	6 cut(s)	166, 306, 414, 618, 770, 2256
FalI	AAGNNNNNCTT	2 cut(s)	2307, 2339
FaqI	GGGAC	2 cut(s)	670, 2114
FauNDI	CATATG	4 cut(s)	118, 675, 1707, 2871
FbaI	TGATCA	1 cut(s)	2182
FblI	GTMKAC	1 cut(s)	1207
Fnu4HI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 2067, 2506
FriOI	GRGCYC	2 cut(s)	86, 2547
Fsp4HI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 2067, 2506
FspBI	CTAG	7 cut(s)	177, 713, 804, 1815, 2126, 2433, 2700
FspI	TGCGCA	1 cut(s)	24
GlaI	GCGC	2 cut(s)	24, 78
GluI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 2067, 2506
HaeIII	GGCC	6 cut(s)	617, 833, 1038, 1308, 1873, 1932
HhaI	GCGC	2 cut(s)	25, 79
Hin6I	GCGC	2 cut(s)	23, 77
HinP1I	GCGC	2 cut(s)	23, 77
HincII	GTYRAC	3 cut(s)	210, 451, 1866
HindII	GTYRAC	3 cut(s)	210, 451, 1866
HindIII	AAGCTT	3 cut(s)	243, 663, 2581
HinfI	GANTC	8 cut(s)	394, 632, 1009, 1189, 1234, 1666, 1730, 2403
HphI	GGTGA	4 cut(s)	340, 743, 1196, 1684
Hpy166II	GTNNAC	6 cut(s)	210, 451, 652, 1208, 1866, 2837
Hpy8I	GTNNAC	6 cut(s)	210, 451, 652, 1208, 1866, 2837
Hpy99I	CGWCG	1 cut(s)	2720
HpyAV	CCTTC	9 cut(s)	49, 592, 819, 1217, 1762, 1798, 2287, 2351, 2563
HpyCH4III	ACNGT	9 cut(s)	92, 606, 972, 1396, 1604, 1937, 2141, 2373, 2652
HpyCH4IV	ACGT	3 cut(s)	683, 2219, 2718
HpyF10VI	GCNNNNNNNGC	9 cut(s)	31, 74, 113, 1141, 2066, 2284, 2551, 2617, 2704
HpySE526I	ACGT	3 cut(s)	683, 2219, 2718
HspAI	GCGC	2 cut(s)	23, 77
Ksp22I	TGATCA	1 cut(s)	2182
LmnI	GCTCC	8 cut(s)	335, 560, 1121, 1894, 1940, 2201, 2284, 2731
Lsp1109I	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 2053, 2517
LweI	GCATC	3 cut(s)	103, 1233, 2563
MaeI	CTAG	7 cut(s)	177, 713, 804, 1815, 2126, 2433, 2700
MaeII	ACGT	3 cut(s)	683, 2219, 2718
MaeIII	GTNAC	7 cut(s)	1369, 1418, 1834, 1900, 2081, 2220, 2770
MfeI	CAATTG	2 cut(s)	758, 2279
MflI	RGATCY	3 cut(s)	298, 410, 540
MhlI	GDGCHC	5 cut(s)	86, 526, 1137, 2547, 2832
MlsI	TGGCCA	1 cut(s)	1932
MluNI	TGGCCA	1 cut(s)	1932
MlyI	GAGTC	3 cut(s)	641, 1724, 2397
MmeI	TCCRAC	3 cut(s)	680, 1575, 2022
Mox20I	TGGCCA	1 cut(s)	1932
Mph1103I	ATGCAT	1 cut(s)	118
MroXI	GAANNNNTTC	4 cut(s)	358, 1684, 2297, 2340
MscI	TGGCCA	1 cut(s)	1932
MseI	TTAA	7 cut(s)	567, 609, 1170, 1620, 2226, 2487, 2616
MslI	CAYNNNNRTG	2 cut(s)	1706, 1710
Msp20I	TGGCCA	1 cut(s)	1932
MspA1I	CMGCKG	1 cut(s)	1691
MspR9I	CCNGG	2 cut(s)	1040, 1588
MunI	CAATTG	2 cut(s)	758, 2279
Mva1269I	GAATGC	4 cut(s)	648, 928, 1752, 2709
MvaI	CCWGG	2 cut(s)	1040, 1588
MwoI	GCNNNNNNNGC	9 cut(s)	31, 74, 113, 1141, 2066, 2284, 2551, 2617, 2704
NcoI	CCATGG	4 cut(s)	166, 306, 414, 618
NdeI	CATATG	4 cut(s)	118, 675, 1707, 2871
NlaIV	GGNNCC	6 cut(s)	194, 337, 412, 616, 2233, 2733
NmuCI	GTSAC	7 cut(s)	1369, 1418, 1834, 1900, 2081, 2220, 2770
NsbI	TGCGCA	1 cut(s)	24
NsiI	ATGCAT	1 cut(s)	118
NspI	RCATGY	2 cut(s)	457, 803
PagI	TCATGA	1 cut(s)	1324
PciI	ACATGT	1 cut(s)	453
PctI	GAATGC	4 cut(s)	648, 928, 1752, 2709
PdmI	GAANNNNTTC	4 cut(s)	358, 1684, 2297, 2340
PfeI	GAWTC	5 cut(s)	394, 1009, 1189, 1234, 1666
PflFI	GACNNNGTC	1 cut(s)	682
PflMI	CCANNNNNTGG	2 cut(s)	2198, 2602
PkrI	GCNGC	9 cut(s)	33, 70, 853, 1126, 1413, 1561, 1569, 2068, 2507
PleI	GAGTC	3 cut(s)	640, 1724, 2397
PpsI	GAGTC	3 cut(s)	640, 1724, 2397
PpuMI	RGGWCCY	1 cut(s)	1282
PscI	ACATGT	1 cut(s)	453
PshAI	GACNNNNGTC	1 cut(s)	2142
Psp124BI	GAGCTC	2 cut(s)	86, 2547
Psp5II	RGGWCCY	1 cut(s)	1282
Psp6I	CCWGG	2 cut(s)	1038, 1586
PspGI	CCWGG	2 cut(s)	1038, 1586
PspN4I	GGNNCC	6 cut(s)	194, 337, 412, 616, 2233, 2733
PspPI	GGNCC	5 cut(s)	615, 832, 1036, 1282, 2593
PspPPI	RGGWCCY	1 cut(s)	1282
PstI	CTGCAG	2 cut(s)	660, 2507
PstNI	CAGNNNCTG	1 cut(s)	2602
PsuI	RGATCY	3 cut(s)	298, 410, 540
PsyI	GACNNNGTC	1 cut(s)	682
PvuII	CAGCTG	1 cut(s)	1691
RsaI	GTAC	8 cut(s)	458, 880, 1546, 2020, 2040, 2166, 2459, 2465
RsaNI	GTAC	8 cut(s)	457, 879, 1545, 2019, 2039, 2165, 2458, 2464
RseI	CAYNNNNRTG	2 cut(s)	1706, 1710
SacI	GAGCTC	2 cut(s)	86, 2547
SaqAI	TTAA	7 cut(s)	567, 609, 1170, 1620, 2226, 2487, 2616
SatI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 2067, 2506
Sau96I	GGNCC	5 cut(s)	615, 832, 1036, 1282, 2593
SbfI	CCTGCAGG	1 cut(s)	660
ScaI	AGTACT	1 cut(s)	2020
SchI	GAGTC	3 cut(s)	641, 1724, 2397
ScrFI	CCNGG	2 cut(s)	1040, 1588
SdaI	CCTGCAGG	1 cut(s)	660
SduI	GDGCHC	5 cut(s)	86, 526, 1137, 2547, 2832
SfaNI	GCATC	3 cut(s)	103, 1233, 2563
SfcI	CTRYAG	4 cut(s)	108, 656, 2048, 2503
SinI	GGWCC	2 cut(s)	1282, 2593
SmiMI	CAYNNNNRTG	2 cut(s)	1706, 1710
SmlI	CTYRAG	5 cut(s)	326, 637, 836, 2345, 2708
SmoI	CTYRAG	5 cut(s)	326, 637, 836, 2345, 2708
SpeI	ACTAGT	1 cut(s)	176
Sse8387I	CCTGCAGG	1 cut(s)	660
SspMI	CTAG	7 cut(s)	177, 713, 804, 1815, 2126, 2433, 2700
SstI	GAGCTC	2 cut(s)	86, 2547
StyD4I	CCNGG	2 cut(s)	1038, 1586
StyI	CCWWGG	6 cut(s)	166, 306, 414, 618, 770, 2256
TaaI	ACNGT	9 cut(s)	92, 606, 972, 1396, 1604, 1937, 2141, 2373, 2652
TaiI	ACGT	3 cut(s)	686, 2222, 2721
TaqI	TCGA	3 cut(s)	2023, 2406, 2715
TatI	WGTACW	5 cut(s)	456, 1544, 2018, 2457, 2463
TfiI	GAWTC	5 cut(s)	394, 1009, 1189, 1234, 1666
Tru1I	TTAA	7 cut(s)	567, 609, 1170, 1620, 2226, 2487, 2616
Tru9I	TTAA	7 cut(s)	567, 609, 1170, 1620, 2226, 2487, 2616
TscAI	CASTG	5 cut(s)	384, 1261, 1933, 1942, 2839
TseFI	GTSAC	7 cut(s)	1369, 1418, 1834, 1900, 2081, 2220, 2770
TseI	GCWGC	9 cut(s)	31, 68, 851, 1124, 1411, 1559, 1567, 2066, 2505
Tsp45I	GTSAC	7 cut(s)	1369, 1418, 1834, 1900, 2081, 2220, 2770
TspGWI	ACGGA	1 cut(s)	896
TspRI	CASTG	5 cut(s)	384, 1261, 1933, 1942, 2839
Tth111I	GACNNNGTC	1 cut(s)	682
Van91I	CCANNNNNTGG	2 cut(s)	2198, 2602
VpaK11BI	GGWCC	2 cut(s)	1282, 2593
XapI	RAATTY	4 cut(s)	493, 1744, 2096, 2421
XceI	RCATGY	2 cut(s)	457, 803
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2278
XmiI	GTMKAC	1 cut(s)	1207
XmnI	GAANNNNTTC	4 cut(s)	358, 1684, 2297, 2340
XspI	CTAG	7 cut(s)	177, 713, 804, 1815, 2126, 2433, 2700
ZrmI	AGTACT	1 cut(s)	2020
Zsp2I	ATGCAT	1 cut(s)	118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.