Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001727

Physical Location & Seq

Genomic Coordinates Reverse (-)

55493849 .. 55499360

Gene Structure 5512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG356900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2916 bp

ATGGCGAAGAGATCAGATTTTGCGCAAAAGCTGCTGGATGATCTTCGGGTTAGGAAGGAACGAATGGCTGCACCAGCGCAGAGCTCAAACCGTTCAAACACAATGGCTATAGATGCATATGCTTATTCCAAGCAAACTTATAGAGGATCAAGGGATACAAAAACCCATGGAATAACTAGTTCCAGAACTGGGAACCCCCAGAGCAGGTCAACTGGAAGTAGTAGAACACCTATTCGTCAAGAAGCTTCAAACCAGATGGTTGCTTATGGGAGAGGTGGGAACTCAGGACAAATAGTAGATCTTTCCATGGCCTTGGCTTTTGCACTTGAGAATGGAGCCACAAAACTCACCAGAACAAGTTCATCAAGCAAAAGTTCAGTGATGGGGTTTCTGAATCAAATTGGTAGGGGATCCATGGACTTCAAAAATATGGAAAGAAAGGGAAATGTCAACATGTACTGGGGTTCAAGTAGTCAGTTCCCTAACCTTTCAAATTTCCATATAGAAGAAATATCCAGAGGGGCACAGAAACTAAACCAGATCCTTAGAGCTTGCTCCAATGGTGTTAATGTTGATAAGTTTTCAATAGAGATCGGGAAGGAACTGTTTAAAGGGGCCATGGATTTGGAAGAGTCCTTGAGAATGCTTGTGAACCTGCAGGAAGCTTCAGAACATATGAACACCTCCCAGAGGAAAAGTCGAATCACATTGCTAGACGAAGATGAAGATGGTGAAGACCAAATAGAAGAACAAAAGCAACTGGCTCTGCCAAGGTTTTCCTTTGACAAATCAACAAGACATGCTCGTAAAATCCAAGAAGTAGGAAGGATGGTCCTCAAGCCTAAGATGGCAGCTCTGACTTACCCCACAGGAGGTAGTACGGATGAGAAGCAAGGCAGAGAGACAGCAACCTCAGTTTCTCGCAGGCATTCAGTCAGCTATATCCCTGATGTCAAAAATCCATCAAAACAGTCAGACCAGAAAGTGTCTAAACCAGAAAAAGATAGGATTCCAAATGTTATTGCAAAGCTGATGGGCCTGGATGAGCTTCCCAAAAATGAAAACGCAAAATCCAGTACCAGACAGAAAGACAACATCCCCAAGAAACCAAGAGAAAGGGGAGCTGCAATAGGGCATACAATGCAGGAAAGCAGTAAGATTGCTGGTGTTAAGACCAAAGATGGTGAGAATCTGGTATCCACAAGTAGACAGAAAGTGGTAGAAGGCAATAAGAATCCCTTGATGCAGAAAAACACTGCTTTTCTTCTGCAAGCAGAAAAGGTCCTGCCTGCCAACAACAATGTTGGCCTTGAGATGGTTATTCATGATGGAAAACAATCCTCAAAAGACTTGATGGGAATAAAACCTGTGACAAGATCAGGAAAGACAACCACCATGAAAACAGATAAGCAGCAAAGTGCCCAATTCAGACAGAACAGCAGTAAGGATAATCACGAAAGAGAAAGAAAGCAGGATACTATGAGGTATGGGGAACAAAAGTTGCAGGTAAGAAAACAACAAGATACTGAGATGGTATCCAAGAGTACATCCAACAAGGCAGCAAAGCAGCCTCACACAAGCCAAGCCAGGGTAAATAGAAACAGTATGGTAGAAGTTGTTAATGCCGTGCAACCCAGAGGAGTTCCAAATGGCACTTACCACGAGAATCTAGTGAGAAGAAAAAGTGCAGCTGAATTGAACATGCATATGAATGATTTTCCTCAAAAGGACTCAGATCAAGAAAATTTAGGCATTCCACCAGCTAGGAAGGAAAAAGCTGTTCATCATGTAGCACCCTTACAGAAGGCAAAAACTAGAAGAGTGAATAAAAGTGAAATTCCTCGAAGAGTGGATGAAGTAGTGACCAGAAGAAATGGAACGCTGAATAAGTTGACAAGGCCACCAAAACAATCTATTTTGGACCAAGTGACACATAGAACCCATGATAAAGTCAGTGGCCACAGTGGAGCAGAAAAGGGTAGAGCCAGTAGGTTGAAACAAGCAGAGCCACGCATAGTCAAGTCCAACAAATCAACAGAAAGCACTCGACCACTACATTTGGTACAGAACCTACAGAAAGAAGCTGAGGCTCCTACTTTCTATGGTCACAATGAAGACGAATTCCGAAGCCTCCGAGAACCAAAAACTCTAGTCCCACATGACAGTCGTCAAAATTCAATCTCAGTAGTACCTAACGATCAACATGATCAAGTACCAATCTTTGGAGCTGATGAGTGCATTACATCACCAAATGCACTTAATGTTGCAGGAACCCAATCAACCCATGAAGACACCTTGGATATTTCATCCACATTGCAATTGGAGCAACAGAAGCCTTTCAAATGGAGAAAACAAGAGCCACTTACAGAAACTGAAATCCTTCTCAAGCAGATAGTGATCCAGAGCCAACTGTTCCTCAACACAGCAGAGGCACTTTTCAGACTCGAAATCCCTTTCGGAATTCTCCACGCTAGTAGTAGCGACTACGATCATGAGTACAAGTACATCACTCATCCCGAAGACATTAAGCTCACATTAGACTGCAGCTACGAGATAATGAAAAGAAAAGGTAAAAGGCAAGAGCTCGCTGTGCATCCCAAGTTTGTGAAGGTATCCATAAGCTTCACTCAGGTCCAGTCTCTGGATGAGCTGGTTAAGCAGTTGAGTAAAGACATTGATAAGCTGAAACTGTATGGGAAGAATGGAAAACTGGAATGTGGGGTTGAAGAGTATGTGCCTAGAATGCTTGAATTCGACGTGAATAACAGGGAGCCTGAGCTGAATTGTATGTGGGATTTGGGTTGGGATGTGACCATGTTTGGGTTTGTTGAAGTGGATGAAGTTGTTAGGGATTTGGAGAGGGGTGTGCTCAGTGGACTTGTTGATGAGCTTACCAGAGACCTCTTTCATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VARLMGL

Protein Analysis

971

Amino Acids

109.59

Weight (kDa)

9.45

Isoelectric Point (pI)

46.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001727)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42710 AT5G42710 AT5G42710
fragaria_vesca	FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870
malus_domestica	MD08G1035200.v1.1 MD15G1031800.v1.1
prunus_persica	Prupe.1G380200_v2.0.a1
pyrus_communis	pycom08g02780 pycom15g02750
rosa_chinensis	RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941
rosa_laevigata	RLG00000011289 RLG00000034832 RLG00000034833
rosa_multiflora	Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003
rosa_roxburghii	Rroxscaffold_1G00028100 Rroxscaffold_7G00167300
rosa_rugosa	Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700
rosa_samantha	Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300
rosa_wichuraiana	Rw5G032650 Rw5G032690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	24
Acc36I	ACCTGC	3 cut(s)	195, 663, 1495
AccB7I	CCANNNNNTGG	2 cut(s)	2222, 2641
AccI	GTMKAC	1 cut(s)	1207
AclWI	GGATC	5 cut(s)	154, 405, 418, 535, 2392
AcoI	YGGCCR	1 cut(s)	1957
AcsI	RAATTY	7 cut(s)	493, 1744, 1836, 2120, 2173, 2460, 2750
AcuI	CTGAAG	1 cut(s)	651
AfaI	GTAC	9 cut(s)	458, 880, 1078, 1546, 2064, 2190, 2214, 2498, 2504
AfiI	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2641, 2820
AflIII	ACRYGT	1 cut(s)	453
AhlI	ACTAGT	1 cut(s)	176
AjiI	CACGTC	1 cut(s)	2758
AjnI	CCWGG	2 cut(s)	1038, 1586
Alw21I	GWGCWC	3 cut(s)	86, 2586, 2871
Alw26I	GTCTC	3 cut(s)	896, 2643, 2892
AlwI	GGATC	5 cut(s)	154, 405, 418, 535, 2392
AlwNI	CAGNNNCTG	2 cut(s)	2372, 2641
AoxI	GGCC	6 cut(s)	309, 615, 1036, 1306, 1898, 1957
ApeKI	GCWGC	9 cut(s)	31, 68, 851, 1124, 1411, 1559, 1567, 1688, 2544
ApoI	RAATTY	7 cut(s)	493, 1744, 1836, 2120, 2173, 2460, 2750
Asp700I	GAANNNNTTC	3 cut(s)	358, 2336, 2379
AspLEI	GCGC	2 cut(s)	25, 79
AspS9I	GGNCC	6 cut(s)	615, 832, 1036, 1282, 1921, 2632
AsuHPI	GGTGA	4 cut(s)	340, 743, 1196, 2238
AvaII	GGWCC	4 cut(s)	832, 1282, 1921, 2632
BaeGI	GKGCMC	2 cut(s)	526, 1423
BalI	TGGCCA	1 cut(s)	1959
BamHI	GGATCC	1 cut(s)	410
BanII	GRGCYC	2 cut(s)	86, 2586
BauI	CACGAG	1 cut(s)	1661
BbsI	GAAGAC	4 cut(s)	741, 2121, 2295, 2526
Bbv12I	GWGCWC	3 cut(s)	86, 2586, 2871
BbvCI	CCTCAGC	1 cut(s)	2085
BbvI	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 1700, 2556
BceAI	ACGGC	1 cut(s)	1610
BciT130I	CCWGG	2 cut(s)	1040, 1588
BciVI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2623
BclI	TGATCA	1 cut(s)	2206
BcoDI	GTCTC	3 cut(s)	896, 2643, 2892
BcuI	ACTAGT	1 cut(s)	176
BfaI	CTAG	8 cut(s)	177, 713, 1670, 1764, 1815, 2150, 2472, 2739
BfmI	CTRYAG	4 cut(s)	108, 656, 2072, 2542
BfuAI	ACCTGC	3 cut(s)	195, 663, 1495
BfuI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2623
BglII	AGATCT	1 cut(s)	298
BisI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 1689, 2545
BlsI	GCNGC	9 cut(s)	33, 70, 853, 1126, 1413, 1561, 1569, 1690, 2546
Bme1390I	CCNGG	2 cut(s)	1040, 1588
Bme18I	GGWCC	4 cut(s)	832, 1282, 1921, 2632
BmgBI	CACGTC	1 cut(s)	2758
BmgT120I	GGNCC	6 cut(s)	615, 832, 1036, 1282, 1921, 2632
BmiI	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2272, 2772
BmrFI	CCNGG	2 cut(s)	1040, 1588
BmrI	ACTGGG	2 cut(s)	198, 469
BmsI	GCATC	3 cut(s)	103, 1233, 2602
BmuI	ACTGGG	2 cut(s)	198, 469
BoxI	GACNNNNGTC	1 cut(s)	2166
BpiI	GAAGAC	4 cut(s)	741, 2121, 2295, 2526
Bpu10I	CCTNAGC	2 cut(s)	2085, 2775
BpuEI	CTTGAG	5 cut(s)	347, 658, 821, 1331, 2369
BsaBI	GATNNNNATC	1 cut(s)	2396
BsaI	GGTCTC	1 cut(s)	2892
BsaJI	CCNNGG	8 cut(s)	166, 306, 312, 414, 618, 770, 1587, 2295
Bsc4I	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2641, 2820
Bse1I	ACTGG	8 cut(s)	193, 217, 464, 765, 1074, 1986, 2635, 2715
Bse3DI	GCAATG	2 cut(s)	707, 2312
Bse8I	GATNNNNATC	1 cut(s)	2396
BseBI	CCWGG	2 cut(s)	1040, 1588
BseDI	CCNNGG	8 cut(s)	166, 306, 312, 414, 618, 770, 1587, 2295
BseJI	GATNNNNATC	1 cut(s)	2396
BseLI	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2641, 2820
BseMI	GCAATG	2 cut(s)	707, 2312
BseMII	CTCAG	9 cut(s)	297, 927, 1518, 1746, 2076, 2196, 2642, 2766, 2884
BseNI	ACTGG	8 cut(s)	193, 217, 464, 765, 1074, 1986, 2635, 2715
BseRI	GAGGAG	1 cut(s)	1653
BseSI	GKGCMC	2 cut(s)	526, 1423
BseXI	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 1700, 2556
BsgI	GTGCAG	2 cut(s)	54, 1707
BshFI	GGCC	6 cut(s)	311, 617, 1038, 1308, 1900, 1959
BsiHKAI	GWGCWC	3 cut(s)	86, 2586, 2871
BslFI	GGGAC	1 cut(s)	2138
BslI	CCNNNNNNNGG	9 cut(s)	189, 204, 690, 872, 1315, 1588, 2222, 2641, 2820
BsmAI	GTCTC	3 cut(s)	896, 2643, 2892
BsmFI	GGGAC	1 cut(s)	2138
BsmI	GAATGC	4 cut(s)	648, 928, 1752, 2748
BsnI	GGCC	6 cut(s)	311, 617, 1038, 1308, 1900, 1959
Bso31I	GGTCTC	1 cut(s)	2892
Bsp1286I	GDGCHC	5 cut(s)	86, 526, 1423, 2586, 2871
Bsp19I	CCATGG	4 cut(s)	166, 306, 414, 618
BspANI	GGCC	6 cut(s)	311, 617, 1038, 1308, 1900, 1959
BspCNI	CTCAG	9 cut(s)	296, 926, 1519, 1745, 2077, 2195, 2641, 2767, 2883
BspHI	TCATGA	2 cut(s)	1324, 2491
BspLI	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2272, 2772
BspMAI	CTGCAG	2 cut(s)	660, 2546
BspMI	ACCTGC	3 cut(s)	195, 663, 1495
BspPI	GGATC	5 cut(s)	154, 405, 418, 535, 2392
BspTNI	GGTCTC	1 cut(s)	2892
BsrDI	GCAATG	2 cut(s)	707, 2312
BsrI	ACTGG	8 cut(s)	193, 217, 464, 765, 1074, 1986, 2635, 2715
BssECI	CCNNGG	8 cut(s)	166, 306, 312, 414, 618, 770, 1587, 2295
BssSI	CACGAG	1 cut(s)	1661
BssT1I	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2295
Bst2BI	CACGAG	1 cut(s)	1661
Bst2UI	CCWGG	2 cut(s)	1040, 1588
Bst4CI	ACNGT	8 cut(s)	92, 606, 972, 1604, 1964, 2165, 2412, 2691
Bst6I	CTCTTC	5 cut(s)	2, 624, 1813, 1840, 2721
BstAPI	GCANNNNNTGC	2 cut(s)	31, 1141
BstC8I	GCNNGC	5 cut(s)	553, 926, 1272, 1290, 2586
BstDSI	CCRYGG	4 cut(s)	166, 306, 414, 618
BstENI	CCTNNNNNAGG	1 cut(s)	688
BstHHI	GCGC	2 cut(s)	25, 79
BstMAI	GTCTC	3 cut(s)	896, 2643, 2892
BstMWI	GCNNNNNNNGC	9 cut(s)	31, 74, 113, 1141, 2323, 2332, 2590, 2656, 2743
BstNI	CCWGG	2 cut(s)	1040, 1588
BstNSI	RCATGY	3 cut(s)	457, 803, 1705
BstPAI	GACNNNNGTC	1 cut(s)	2166
BstSCI	CCNGG	2 cut(s)	1038, 1586
BstSFI	CTRYAG	4 cut(s)	108, 656, 2072, 2542
BstSLI	GKGCMC	2 cut(s)	526, 1423
BstV1I	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 1700, 2556
BstV2I	GAAGAC	4 cut(s)	741, 2121, 2295, 2526
BstX2I	RGATCY	3 cut(s)	298, 410, 540
BstXI	CCANNNNNNTGG	2 cut(s)	313, 625
BstYI	RGATCY	3 cut(s)	298, 410, 540
BsuI	GTATCC	5 cut(s)	148, 1207, 1468, 1546, 2623
BsuRI	GGCC	6 cut(s)	311, 617, 1038, 1308, 1900, 1959
BtgI	CCRYGG	4 cut(s)	166, 306, 414, 618
BtrI	CACGTC	1 cut(s)	2758
BtsI	GCAGTG	1 cut(s)	1254
BtsIMutI	CAGTG	5 cut(s)	384, 1254, 1960, 1969, 2878
BveI	ACCTGC	3 cut(s)	195, 663, 1495
Cac8I	GCNNGC	5 cut(s)	553, 926, 1272, 1290, 2586
CaiI	CAGNNNCTG	2 cut(s)	2372, 2641
CciI	TCATGA	2 cut(s)	1324, 2491
CfoI	GCGC	2 cut(s)	25, 79
Cfr13I	GGNCC	6 cut(s)	615, 832, 1036, 1282, 1921, 2632
Csp6I	GTAC	9 cut(s)	457, 879, 1077, 1545, 2063, 2189, 2213, 2497, 2503
CspCI	CAANNNNNGTGG	2 cut(s)	2040, 2075
CviQI	GTAC	9 cut(s)	457, 879, 1077, 1545, 2063, 2189, 2213, 2497, 2503
DraI	TTTAAA	1 cut(s)	610
EaeI	YGGCCR	1 cut(s)	1957
Eam1104I	CTCTTC	5 cut(s)	2, 624, 1813, 1840, 2721
EarI	CTCTTC	5 cut(s)	2, 624, 1813, 1840, 2721
Ecl136II	GAGCTC	2 cut(s)	84, 2584
Eco130I	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2295
Eco24I	GRGCYC	2 cut(s)	86, 2586
Eco31I	GGTCTC	1 cut(s)	2892
Eco47I	GGWCC	4 cut(s)	832, 1282, 1921, 2632
Eco53kI	GAGCTC	2 cut(s)	84, 2584
Eco57I	CTGAAG	1 cut(s)	651
EcoICRI	GAGCTC	2 cut(s)	84, 2584
EcoNI	CCTNNNNNAGG	1 cut(s)	688
EcoO109I	RGGNCCY	1 cut(s)	1282
EcoRI	GAATTC	3 cut(s)	2120, 2460, 2750
EcoRII	CCWGG	2 cut(s)	1038, 1586
EcoT14I	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2295
EcoT22I	ATGCAT	2 cut(s)	118, 1707
EcoT38I	GRGCYC	2 cut(s)	86, 2586
ErhI	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2295
FalI	AAGNNNNNCTT	4 cut(s)	1223, 1255, 2346, 2378
FaqI	GGGAC	1 cut(s)	2138
FauNDI	CATATG	4 cut(s)	118, 675, 1707, 2910
FbaI	TGATCA	1 cut(s)	2206
FblI	GTMKAC	1 cut(s)	1207
Fnu4HI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 1689, 2545
FriOI	GRGCYC	2 cut(s)	86, 2586
Fsp4HI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 1689, 2545
FspBI	CTAG	8 cut(s)	177, 713, 1670, 1764, 1815, 2150, 2472, 2739
FspI	TGCGCA	1 cut(s)	24
GlaI	GCGC	2 cut(s)	24, 78
GluI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 1689, 2545
HaeIII	GGCC	6 cut(s)	311, 617, 1038, 1308, 1900, 1959
HhaI	GCGC	2 cut(s)	25, 79
Hin6I	GCGC	2 cut(s)	23, 77
HinP1I	GCGC	2 cut(s)	23, 77
HincII	GTYRAC	3 cut(s)	210, 451, 1893
HindII	GTYRAC	3 cut(s)	210, 451, 1893
HindIII	AAGCTT	3 cut(s)	243, 663, 2620
HinfI	GANTC	9 cut(s)	394, 632, 702, 1009, 1189, 1234, 1666, 1730, 2442
HphI	GGTGA	4 cut(s)	340, 743, 1196, 2238
Hpy166II	GTNNAC	6 cut(s)	210, 451, 652, 1208, 1893, 2876
Hpy8I	GTNNAC	6 cut(s)	210, 451, 652, 1208, 1893, 2876
Hpy99I	CGWCG	1 cut(s)	2759
HpyAV	CCTTC	8 cut(s)	49, 592, 819, 1217, 1762, 1798, 2390, 2602
HpyCH4III	ACNGT	8 cut(s)	92, 606, 972, 1604, 1964, 2165, 2412, 2691
HpyCH4IV	ACGT	1 cut(s)	2757
HpyF10VI	GCNNNNNNNGC	9 cut(s)	31, 74, 113, 1141, 2323, 2332, 2590, 2656, 2743
HpySE526I	ACGT	1 cut(s)	2757
HspAI	GCGC	2 cut(s)	23, 77
Ksp22I	TGATCA	1 cut(s)	2206
LmnI	GCTCC	8 cut(s)	335, 560, 1121, 1967, 2095, 2225, 2323, 2770
Lsp1109I	GCAGC	9 cut(s)	18, 55, 863, 1111, 1423, 1571, 1579, 1700, 2556
LweI	GCATC	3 cut(s)	103, 1233, 2602
MaeI	CTAG	8 cut(s)	177, 713, 1670, 1764, 1815, 2150, 2472, 2739
MaeII	ACGT	1 cut(s)	2757
MaeIII	GTNAC	5 cut(s)	1369, 1861, 1927, 2105, 2809
MfeI	CAATTG	1 cut(s)	2318
MflI	RGATCY	3 cut(s)	298, 410, 540
MhlI	GDGCHC	5 cut(s)	86, 526, 1423, 2586, 2871
MlsI	TGGCCA	1 cut(s)	1959
MluNI	TGGCCA	1 cut(s)	1959
MlyI	GAGTC	3 cut(s)	641, 1724, 2436
MmeI	TCCRAC	2 cut(s)	1575, 2049
Mox20I	TGGCCA	1 cut(s)	1959
Mph1103I	ATGCAT	2 cut(s)	118, 1707
MroXI	GAANNNNTTC	3 cut(s)	358, 2336, 2379
MscI	TGGCCA	1 cut(s)	1959
MseI	TTAA	7 cut(s)	567, 609, 1170, 1620, 2259, 2526, 2655
MslI	CAYNNNNRTG	2 cut(s)	1706, 1710
Msp20I	TGGCCA	1 cut(s)	1959
MspA1I	CMGCKG	1 cut(s)	1691
MspR9I	CCNGG	2 cut(s)	1040, 1588
MunI	CAATTG	1 cut(s)	2318
Mva1269I	GAATGC	4 cut(s)	648, 928, 1752, 2748
MvaI	CCWGG	2 cut(s)	1040, 1588
MwoI	GCNNNNNNNGC	9 cut(s)	31, 74, 113, 1141, 2323, 2332, 2590, 2656, 2743
NcoI	CCATGG	4 cut(s)	166, 306, 414, 618
NdeI	CATATG	4 cut(s)	118, 675, 1707, 2910
NlaIV	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2272, 2772
NmuCI	GTSAC	5 cut(s)	1369, 1861, 1927, 2105, 2809
NsbI	TGCGCA	1 cut(s)	24
NsiI	ATGCAT	2 cut(s)	118, 1707
NspI	RCATGY	3 cut(s)	457, 803, 1705
PagI	TCATGA	2 cut(s)	1324, 2491
PciI	ACATGT	1 cut(s)	453
PctI	GAATGC	4 cut(s)	648, 928, 1752, 2748
PdmI	GAANNNNTTC	3 cut(s)	358, 2336, 2379
PfeI	GAWTC	6 cut(s)	394, 702, 1009, 1189, 1234, 1666
PflMI	CCANNNNNTGG	2 cut(s)	2222, 2641
PkrI	GCNGC	9 cut(s)	33, 70, 853, 1126, 1413, 1561, 1569, 1690, 2546
PleI	GAGTC	3 cut(s)	640, 1724, 2436
PpsI	GAGTC	3 cut(s)	640, 1724, 2436
PpuMI	RGGWCCY	1 cut(s)	1282
PscI	ACATGT	1 cut(s)	453
PshAI	GACNNNNGTC	1 cut(s)	2166
Psp124BI	GAGCTC	2 cut(s)	86, 2586
Psp5II	RGGWCCY	1 cut(s)	1282
Psp6I	CCWGG	2 cut(s)	1038, 1586
PspGI	CCWGG	2 cut(s)	1038, 1586
PspN4I	GGNNCC	7 cut(s)	194, 337, 412, 616, 2091, 2272, 2772
PspPI	GGNCC	6 cut(s)	615, 832, 1036, 1282, 1921, 2632
PspPPI	RGGWCCY	1 cut(s)	1282
PstI	CTGCAG	2 cut(s)	660, 2546
PstNI	CAGNNNCTG	2 cut(s)	2372, 2641
PsuI	RGATCY	3 cut(s)	298, 410, 540
PvuII	CAGCTG	1 cut(s)	1691
RsaI	GTAC	9 cut(s)	458, 880, 1078, 1546, 2064, 2190, 2214, 2498, 2504
RsaNI	GTAC	9 cut(s)	457, 879, 1077, 1545, 2063, 2189, 2213, 2497, 2503
RseI	CAYNNNNRTG	2 cut(s)	1706, 1710
SacI	GAGCTC	2 cut(s)	86, 2586
SaqAI	TTAA	7 cut(s)	567, 609, 1170, 1620, 2259, 2526, 2655
SatI	GCNGC	9 cut(s)	32, 69, 852, 1125, 1412, 1560, 1568, 1689, 2545
Sau96I	GGNCC	6 cut(s)	615, 832, 1036, 1282, 1921, 2632
SbfI	CCTGCAGG	1 cut(s)	660
SchI	GAGTC	3 cut(s)	641, 1724, 2436
ScrFI	CCNGG	2 cut(s)	1040, 1588
SdaI	CCTGCAGG	1 cut(s)	660
SduI	GDGCHC	5 cut(s)	86, 526, 1423, 2586, 2871
SfaNI	GCATC	3 cut(s)	103, 1233, 2602
SfcI	CTRYAG	4 cut(s)	108, 656, 2072, 2542
SinI	GGWCC	4 cut(s)	832, 1282, 1921, 2632
SmiMI	CAYNNNNRTG	2 cut(s)	1706, 1710
SmlI	CTYRAG	5 cut(s)	326, 637, 836, 1310, 2384
SmoI	CTYRAG	5 cut(s)	326, 637, 836, 1310, 2384
SpeI	ACTAGT	1 cut(s)	176
Sse8387I	CCTGCAGG	1 cut(s)	660
SspMI	CTAG	8 cut(s)	177, 713, 1670, 1764, 1815, 2150, 2472, 2739
SstI	GAGCTC	2 cut(s)	86, 2586
StyD4I	CCNGG	2 cut(s)	1038, 1586
StyI	CCWWGG	7 cut(s)	166, 306, 312, 414, 618, 770, 2295
TaaI	ACNGT	8 cut(s)	92, 606, 972, 1604, 1964, 2165, 2412, 2691
TaiI	ACGT	1 cut(s)	2760
TaqI	TCGA	5 cut(s)	700, 1843, 2047, 2445, 2754
TatI	WGTACW	4 cut(s)	456, 1544, 2496, 2502
TfiI	GAWTC	6 cut(s)	394, 702, 1009, 1189, 1234, 1666
Tru1I	TTAA	7 cut(s)	567, 609, 1170, 1620, 2259, 2526, 2655
Tru9I	TTAA	7 cut(s)	567, 609, 1170, 1620, 2259, 2526, 2655
TscAI	CASTG	5 cut(s)	384, 1261, 1960, 1969, 2878
TseFI	GTSAC	5 cut(s)	1369, 1861, 1927, 2105, 2809
TseI	GCWGC	9 cut(s)	31, 68, 851, 1124, 1411, 1559, 1567, 1688, 2544
Tsp45I	GTSAC	5 cut(s)	1369, 1861, 1927, 2105, 2809
TspGWI	ACGGA	1 cut(s)	896
TspRI	CASTG	5 cut(s)	384, 1261, 1960, 1969, 2878
Van91I	CCANNNNNTGG	2 cut(s)	2222, 2641
VpaK11BI	GGWCC	4 cut(s)	832, 1282, 1921, 2632
XagI	CCTNNNNNAGG	1 cut(s)	688
XapI	RAATTY	7 cut(s)	493, 1744, 1836, 2120, 2173, 2460, 2750
XceI	RCATGY	3 cut(s)	457, 803, 1705
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2317
XmiI	GTMKAC	1 cut(s)	1207
XmnI	GAANNNNTTC	3 cut(s)	358, 2336, 2379
XspI	CTAG	8 cut(s)	177, 713, 1670, 1764, 1815, 2150, 2472, 2739
Zsp2I	ATGCAT	2 cut(s)	118, 1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.