No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G42710 AT5G42710 AT5G42710 |
| fragaria_vesca | FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 |
| malus_domestica | MD08G1035200.v1.1 MD15G1031800.v1.1 |
| prunus_persica | Prupe.1G380200_v2.0.a1 |
| pyrus_communis | pycom08g02780 pycom15g02750 |
| rosa_chinensis | RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941 |
| rosa_laevigata | RLG00000011289 RLG00000034832 RLG00000034833 |
| rosa_multiflora | Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00028100 Rroxscaffold_7G00167300 |
| rosa_rugosa | Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700 |
| rosa_samantha | Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300 |
| rosa_wichuraiana | Rw5G032650 Rw5G032690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 42 |
| AclWI | GGATC | 1 cut(s) | 172 |
| AcsI | RAATTY | 1 cut(s) | 240 |
| AfaI | GTAC | 1 cut(s) | 278 |
| AgsI | TTSAA | 1 cut(s) | 121 |
| AluBI | AGCT | 1 cut(s) | 309 |
| AluI | AGCT | 1 cut(s) | 309 |
| AlwI | GGATC | 1 cut(s) | 172 |
| ApoI | RAATTY | 1 cut(s) | 240 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 116, 159 |
| BbsI | GAAGAC | 2 cut(s) | 75, 305 |
| BfaI | CTAG | 1 cut(s) | 252 |
| BmiI | GGNNCC | 1 cut(s) | 52 |
| BpiI | GAAGAC | 2 cut(s) | 75, 305 |
| BpuEI | CTTGAG | 1 cut(s) | 149 |
| BsaBI | GATNNNNATC | 1 cut(s) | 176 |
| BsaJI | CCNNGG | 1 cut(s) | 75 |
| Bse3DI | GCAATG | 1 cut(s) | 92 |
| Bse8I | GATNNNNATC | 1 cut(s) | 176 |
| BseDI | CCNNGG | 1 cut(s) | 75 |
| BseGI | GGATG | 1 cut(s) | 86 |
| BseJI | GATNNNNATC | 1 cut(s) | 176 |
| BseMI | GCAATG | 1 cut(s) | 92 |
| Bsp143I | GATC | 2 cut(s) | 177, 268 |
| BspHI | TCATGA | 1 cut(s) | 271 |
| BspLI | GGNNCC | 1 cut(s) | 52 |
| BspPI | GGATC | 1 cut(s) | 172 |
| BsrDI | GCAATG | 1 cut(s) | 92 |
| BssECI | CCNNGG | 1 cut(s) | 75 |
| BssMI | GATC | 2 cut(s) | 177, 268 |
| BssT1I | CCWWGG | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 1 cut(s) | 192 |
| BstDEI | CTNAG | 1 cut(s) | 143 |
| BstF5I | GGATG | 1 cut(s) | 86 |
| BstKTI | GATC | 2 cut(s) | 180, 271 |
| BstMBI | GATC | 2 cut(s) | 177, 268 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 103 |
| BstV2I | GAAGAC | 2 cut(s) | 75, 305 |
| BtsCI | GGATG | 1 cut(s) | 86 |
| CciI | TCATGA | 1 cut(s) | 271 |
| Csp6I | GTAC | 1 cut(s) | 277 |
| CviAII | CATG | 2 cut(s) | 65, 272 |
| CviJI | RGCY | 4 cut(s) | 116, 139, 186, 309 |
| CviKI_1 | RGCY | 4 cut(s) | 116, 139, 186, 309 |
| CviQI | GTAC | 1 cut(s) | 277 |
| DdeI | CTNAG | 1 cut(s) | 143 |
| DpnI | GATC | 2 cut(s) | 179, 270 |
| DpnII | GATC | 2 cut(s) | 177, 268 |
| Eco130I | CCWWGG | 1 cut(s) | 75 |
| EcoRI | GAATTC | 1 cut(s) | 240 |
| EcoT14I | CCWWGG | 1 cut(s) | 75 |
| ErhI | CCWWGG | 1 cut(s) | 75 |
| FaeI | CATG | 2 cut(s) | 68, 275 |
| FaiI | YATR | 2 cut(s) | 66, 273 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 126, 158 |
| FatI | CATG | 2 cut(s) | 64, 271 |
| FokI | GGATG | 1 cut(s) | 73 |
| FspBI | CTAG | 1 cut(s) | 252 |
| Hin1II | CATG | 2 cut(s) | 68, 275 |
| HinfI | GANTC | 1 cut(s) | 222 |
| Hpy188I | TCNGA | 2 cut(s) | 221, 239 |
| Hpy188III | TCNNGA | 3 cut(s) | 181, 272, 295 |
| HpyAV | CCTTC | 2 cut(s) | 106, 170 |
| HpyCH4III | ACNGT | 1 cut(s) | 192 |
| HpyCH4IV | ACGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 47, 97 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 103 |
| HpyF3I | CTNAG | 1 cut(s) | 143 |
| HpySE526I | ACGT | 1 cut(s) | 42 |
| Hsp92II | CATG | 2 cut(s) | 68, 275 |
| Kzo9I | GATC | 2 cut(s) | 177, 268 |
| LmnI | GCTCC | 1 cut(s) | 103 |
| LpnPI | CCDG | 2 cut(s) | 33, 194 |
| MaeI | CTAG | 1 cut(s) | 252 |
| MaeII | ACGT | 1 cut(s) | 42 |
| MalI | GATC | 2 cut(s) | 179, 270 |
| MboI | GATC | 2 cut(s) | 177, 268 |
| MboII | GAAGA | 2 cut(s) | 80, 310 |
| MfeI | CAATTG | 1 cut(s) | 98 |
| MluCI | AATT | 3 cut(s) | 36, 98, 240 |
| MlyI | GAGTC | 1 cut(s) | 216 |
| MnlI | CCTC | 3 cut(s) | 202, 206, 243 |
| MroXI | GAANNNNTTC | 2 cut(s) | 116, 159 |
| MseI | TTAA | 3 cut(s) | 32, 39, 305 |
| MunI | CAATTG | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 103 |
| NdeII | GATC | 2 cut(s) | 177, 268 |
| NlaIII | CATG | 2 cut(s) | 68, 275 |
| NlaIV | GGNNCC | 1 cut(s) | 52 |
| PagI | TCATGA | 1 cut(s) | 271 |
| PdmI | GAANNNNTTC | 2 cut(s) | 116, 159 |
| PleI | GAGTC | 1 cut(s) | 216 |
| PpsI | GAGTC | 1 cut(s) | 216 |
| Psp1406I | AACGTT | 1 cut(s) | 42 |
| PspN4I | GGNNCC | 1 cut(s) | 52 |
| RsaI | GTAC | 1 cut(s) | 278 |
| RsaNI | GTAC | 1 cut(s) | 277 |
| SaqAI | TTAA | 3 cut(s) | 32, 39, 305 |
| Sau3AI | GATC | 2 cut(s) | 177, 268 |
| SchI | GAGTC | 1 cut(s) | 216 |
| SetI | ASST | 3 cut(s) | 45, 77, 311 |
| SmlI | CTYRAG | 1 cut(s) | 164 |
| SmoI | CTYRAG | 1 cut(s) | 164 |
| Sse9I | AATT | 3 cut(s) | 36, 98, 240 |
| SspMI | CTAG | 1 cut(s) | 252 |
| StyI | CCWWGG | 1 cut(s) | 75 |
| TaaI | ACNGT | 1 cut(s) | 192 |
| TaiI | ACGT | 1 cut(s) | 45 |
| TaqI | TCGA | 1 cut(s) | 225 |
| TasI | AATT | 3 cut(s) | 36, 98, 240 |
| TatI | WGTACW | 1 cut(s) | 276 |
| Tru1I | TTAA | 3 cut(s) | 32, 39, 305 |
| Tru9I | TTAA | 3 cut(s) | 32, 39, 305 |
| TspDTI | ATGAA | 2 cut(s) | 75, 81 |
| XapI | RAATTY | 1 cut(s) | 240 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 97 |
| XmnI | GAANNNNTTC | 2 cut(s) | 116, 159 |
| XspI | CTAG | 1 cut(s) | 252 |