Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001727

Physical Location & Seq

Genomic Coordinates Reverse (-)

56242971 .. 56247735

Gene Structure 4765 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG372200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

ATGGTTGCTTATGGGAGAGGTGGGAACTCAGGACAAATAGTAGATCTTTCCATGGCCTTGGCTTTTGCACTTGAGAATGGAGCCACAAAACTCACCAGAACAAGTTCATCAAGCAAAAGTTCAGTGATGGGGTTTCTGAATCAAATTGGTAGGGGATCCATGGACTTCAAAAATATGGAAAGAAAGGGAAATGTCAACATGTACTGGGGTTCAAGTAGTCAGTTCCCTAACCTTTCAAATTTCCATATAGAAGAAATATCCAGAGGGGCACAGAAACTAAACCAGATCCTTAGAGCTTGCTCCAATGGTGTTAATGTTGATAAGTTTTCAATAGAGATCGGGAAGGAACTGTTTAAAGGGGCCATGGATTTGGAAGAGTCCTTGAGAATGCTTGTGAACCTGCAGGAAGCTTCAGAACATATGAACACCTCCCAGAGGAAAAGTCGAATCACATTGCTAGACGAAGATGAAGATGGTGAAGACCAAATAGAAGAACAAAAGCAACTGGCTCTGCCAAGGTTTTCCTTTGACAAATCAACAAGACATGCTCGTAAAATCCAAGAAGTAGGAAGGATGGTCCTCAAGCCTAAGATGGCAGCTCTGACTTACCCCACAGGAGGTAGTACGGATGAGAAGCAAGGCAGAGAGACAGCAACCTCAGTTTCTCGCAGGCATTCAGTCAGCTATATCCCTGATGTCAAAAATCCATCAAAACAGTCAGACCAGAAAGTGTCTAAACCAGAAAAAGATAGGATTCCAAATGTTATTGCAAAGCTGATGGGCCTGGATGAGCTTCCCAAAAATGAAAACGCAAAATCCAGTACCAGACAGAAAGACAACATCCCCAAGAAACCAAGAGAAAGGGGAGCTGCAATAGGGCATACAATGCAGGAAAGCAGTAAGATTGCTGGTGTTAAGACCAAAGATGGTGAGAATCTGGTATCCACAAGTAGACAGAAAGTGGTAGAAGGCAATAAGAATCCCTTGATGCAGAAAAACACTGCTTTTCTTCTGCAAGCAGAAAAGGTCCTGCCTGCCAACAACAATGTTGGCCTTGAGATGGTTATTCATGATGGAAAACAATCCTCAAAAGACTTGATGGGAATAAAACCTGTGACAAGATCAGGAAAGACAACCACCATGAAAACAGATAAGCAGCAAAGTGCCCAATTCAGACAGAACAGCAGTAAGGATAATCACGAAAGAGAAAGAAAGCAGGATACTATGAGGTATGGGGAACAAAAGTTGCAGGTAAGAAAACAACAAGATACTGAGATGGTATCCAAGAGTACATCCAACAAGGCAGCAAAGCAGCCTCACACAAGCCAAGCCAGGGTAAATAGAAACAGTATGGTAGAAGTTGTTAATGCCGTGCAACCCAGAGGAGTTCCAAATGGCACTTACCACGAGAATCTAGTGAGAAGAAAAAGTGCAGCTGAATTGAACATGCATATGAATGATTTTCCTCAAAAGGACTCAGATCAAGAAAATTTAGGCATTCCACCAGCTAGGAAGGAAAAAGCTGTTCATCATGTAGCACCCTTACAGAAGGCAAAAACTAGAAGAGTGAATAAAAGTGAAATTCCTCGAAGAGTGGATGAAGTAGTGACCAGAAGAAATGGAACGCTGAATAAGTTGACAAGGCCACCAAAACAATCTATTTTGGACCAAGTGACACATAGAACCCATGATAAAGTCAGTGGCCACAGTGGAGCAGAAAAGGGTAGAGCCAGTAGGTTGAAACAAGCAGAGCCACGCATAGTCAAGTCCAACAAATCAACAGAAAGCACTCGACCACTACATTTGGTACAGAACCTACAGAAAGAAGCTGAGGCTCCTACTTTCTATGGTCACAATGAAGACGAATTCCGAAGCCTCCGAGAACCAAAAACTCTAGTCCCACATGACAGTCGTCAAAATTCAATCTCAGTAGTACCTAACGATCAACATGATCAAGTACCAATCTTTGGAGCTGATGAGTGCATTACATCACCAAATGCACTTAATGGAACCCAATCAACCCATGAAGACACCTTGGATATTTCATCCACATTGCAATTGGAGCAACAGAAGCCTTTCAAATGGAGAAAACAAGAGCCACTTACAGAAACTGAAATCCTTCTCAAGCAGATAGTGATCCAGAGCCAACTGTTCCTCAACACAGCAGAGGCACTTTTCAGACTCGAAATCCCTTTCGGAATTCTCCACGCTAGTAGTAGCGACTACGATCATGAGTACAAGTACATCACTCATCCCGAAGACATTAAGCTCACATTAGACTGCAGCTACGAGATAATGAAAAGAAAAGGTAAAAGGCAAGAGCTCGCTGTGCATCCCAAGTTTGTGAAGGTATCCATAAGCTTCACTCAGGTCCAGTCTCTGGATGAGCTGGTTAAGCAGTTGAGTAAAGACATTGATAAGCTGAAACTGTATGGGAAGAATGGAAAACTGGAATGTGGGGTTGAAGAGTATGTGCCTAGAATGCTTGAATTCGACGTGAATAACAGGGAGCCTGAGCTGAATTGTATGTGGGATTTGGGTTGGGATGTGACCATGTTTGGGTTTGTTGAAGTGGATGAAGTTGTTAGGGATTTGGAGAGGGGTGTGCTCAGTGGACTTGTTGATGAGCTTACCAGAGACCTCTTTCATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VARLMGL

Protein Analysis

884

Amino Acids

99.96

Weight (kDa)

9.24

Isoelectric Point (pI)

44.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001727)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42710 AT5G42710 AT5G42710
fragaria_vesca	FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870
malus_domestica	MD08G1035200.v1.1 MD15G1031800.v1.1
prunus_persica	Prupe.1G380200_v2.0.a1
pyrus_communis	pycom08g02780 pycom15g02750
rosa_chinensis	RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941
rosa_laevigata	RLG00000011289 RLG00000034832 RLG00000034833
rosa_multiflora	Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003
rosa_roxburghii	Rroxscaffold_1G00028100 Rroxscaffold_7G00167300
rosa_rugosa	Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700
rosa_samantha	Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300
rosa_wichuraiana	Rw5G032650 Rw5G032690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	408, 1240
AccB7I	CCANNNNNTGG	2 cut(s)	1967, 2380
AccI	GTMKAC	1 cut(s)	952
AclWI	GGATC	4 cut(s)	150, 163, 280, 2131
AcoI	YGGCCR	1 cut(s)	1702
AcsI	RAATTY	7 cut(s)	238, 1489, 1581, 1865, 1918, 2199, 2489
AcuI	CTGAAG	1 cut(s)	396
AfaI	GTAC	9 cut(s)	203, 625, 823, 1291, 1809, 1935, 1959, 2237, 2243
AfiI	CCNNNNNNNGG	7 cut(s)	435, 617, 1060, 1333, 1967, 2380, 2559
AflIII	ACRYGT	1 cut(s)	198
AjiI	CACGTC	1 cut(s)	2497
AjnI	CCWGG	2 cut(s)	783, 1331
Alw21I	GWGCWC	2 cut(s)	2325, 2610
Alw26I	GTCTC	3 cut(s)	641, 2382, 2631
AlwI	GGATC	4 cut(s)	150, 163, 280, 2131
AlwNI	CAGNNNCTG	2 cut(s)	2111, 2380
AoxI	GGCC	6 cut(s)	54, 360, 781, 1051, 1643, 1702
ApeKI	GCWGC	7 cut(s)	596, 869, 1156, 1304, 1312, 1433, 2283
ApoI	RAATTY	7 cut(s)	238, 1489, 1581, 1865, 1918, 2199, 2489
Asp700I	GAANNNNTTC	3 cut(s)	103, 2075, 2118
AspS9I	GGNCC	6 cut(s)	360, 577, 781, 1027, 1666, 2371
AsuHPI	GGTGA	4 cut(s)	85, 488, 941, 1983
AvaII	GGWCC	4 cut(s)	577, 1027, 1666, 2371
BaeGI	GKGCMC	2 cut(s)	271, 1168
BalI	TGGCCA	1 cut(s)	1704
BamHI	GGATCC	1 cut(s)	155
BanII	GRGCYC	1 cut(s)	2325
BauI	CACGAG	1 cut(s)	1406
BbsI	GAAGAC	4 cut(s)	486, 1866, 2034, 2265
Bbv12I	GWGCWC	2 cut(s)	2325, 2610
BbvCI	CCTCAGC	1 cut(s)	1830
BbvI	GCAGC	7 cut(s)	608, 856, 1168, 1316, 1324, 1445, 2295
BceAI	ACGGC	1 cut(s)	1355
BciT130I	CCWGG	2 cut(s)	785, 1333
BciVI	GTATCC	4 cut(s)	952, 1213, 1291, 2362
BclI	TGATCA	1 cut(s)	1951
BcoDI	GTCTC	3 cut(s)	641, 2382, 2631
BfaI	CTAG	7 cut(s)	458, 1415, 1509, 1560, 1895, 2211, 2478
BfmI	CTRYAG	3 cut(s)	401, 1817, 2281
BfuAI	ACCTGC	2 cut(s)	408, 1240
BfuI	GTATCC	4 cut(s)	952, 1213, 1291, 2362
BglII	AGATCT	1 cut(s)	43
BisI	GCNGC	7 cut(s)	597, 870, 1157, 1305, 1313, 1434, 2284
BlsI	GCNGC	7 cut(s)	598, 871, 1158, 1306, 1314, 1435, 2285
Bme1390I	CCNGG	2 cut(s)	785, 1333
Bme18I	GGWCC	4 cut(s)	577, 1027, 1666, 2371
BmgBI	CACGTC	1 cut(s)	2497
BmgT120I	GGNCC	6 cut(s)	360, 577, 781, 1027, 1666, 2371
BmiI	GGNNCC	6 cut(s)	82, 157, 361, 1836, 2011, 2511
BmrFI	CCNGG	2 cut(s)	785, 1333
BmrI	ACTGGG	1 cut(s)	214
BmsI	GCATC	2 cut(s)	978, 2341
BmuI	ACTGGG	1 cut(s)	214
BoxI	GACNNNNGTC	1 cut(s)	1911
BpiI	GAAGAC	4 cut(s)	486, 1866, 2034, 2265
Bpu10I	CCTNAGC	2 cut(s)	1830, 2514
BpuEI	CTTGAG	5 cut(s)	92, 403, 566, 1076, 2108
BsaBI	GATNNNNATC	1 cut(s)	2135
BsaI	GGTCTC	1 cut(s)	2631
BsaJI	CCNNGG	7 cut(s)	51, 57, 159, 363, 515, 1332, 2034
Bsc4I	CCNNNNNNNGG	7 cut(s)	435, 617, 1060, 1333, 1967, 2380, 2559
Bse1I	ACTGG	6 cut(s)	209, 510, 819, 1731, 2374, 2454
Bse3DI	GCAATG	2 cut(s)	452, 2051
Bse8I	GATNNNNATC	1 cut(s)	2135
BseBI	CCWGG	2 cut(s)	785, 1333
BseDI	CCNNGG	7 cut(s)	51, 57, 159, 363, 515, 1332, 2034
BseJI	GATNNNNATC	1 cut(s)	2135
BseLI	CCNNNNNNNGG	7 cut(s)	435, 617, 1060, 1333, 1967, 2380, 2559
BseMI	GCAATG	2 cut(s)	452, 2051
BseMII	CTCAG	9 cut(s)	42, 672, 1263, 1491, 1821, 1941, 2381, 2505, 2623
BseNI	ACTGG	6 cut(s)	209, 510, 819, 1731, 2374, 2454
BseRI	GAGGAG	1 cut(s)	1398
BseSI	GKGCMC	2 cut(s)	271, 1168
BseXI	GCAGC	7 cut(s)	608, 856, 1168, 1316, 1324, 1445, 2295
BsgI	GTGCAG	1 cut(s)	1452
BshFI	GGCC	6 cut(s)	56, 362, 783, 1053, 1645, 1704
BsiHKAI	GWGCWC	2 cut(s)	2325, 2610
BslFI	GGGAC	1 cut(s)	1883
BslI	CCNNNNNNNGG	7 cut(s)	435, 617, 1060, 1333, 1967, 2380, 2559
BsmAI	GTCTC	3 cut(s)	641, 2382, 2631
BsmFI	GGGAC	1 cut(s)	1883
BsmI	GAATGC	4 cut(s)	393, 673, 1497, 2487
BsnI	GGCC	6 cut(s)	56, 362, 783, 1053, 1645, 1704
Bso31I	GGTCTC	1 cut(s)	2631
Bsp1286I	GDGCHC	4 cut(s)	271, 1168, 2325, 2610
Bsp19I	CCATGG	3 cut(s)	51, 159, 363
BspANI	GGCC	6 cut(s)	56, 362, 783, 1053, 1645, 1704
BspCNI	CTCAG	9 cut(s)	41, 671, 1264, 1490, 1822, 1940, 2380, 2506, 2622
BspHI	TCATGA	2 cut(s)	1069, 2230
BspLI	GGNNCC	6 cut(s)	82, 157, 361, 1836, 2011, 2511
BspMAI	CTGCAG	2 cut(s)	405, 2285
BspMI	ACCTGC	2 cut(s)	408, 1240
BspPI	GGATC	4 cut(s)	150, 163, 280, 2131
BspTNI	GGTCTC	1 cut(s)	2631
BsrDI	GCAATG	2 cut(s)	452, 2051
BsrI	ACTGG	6 cut(s)	209, 510, 819, 1731, 2374, 2454
BssECI	CCNNGG	7 cut(s)	51, 57, 159, 363, 515, 1332, 2034
BssSI	CACGAG	1 cut(s)	1406
BssT1I	CCWWGG	6 cut(s)	51, 57, 159, 363, 515, 2034
Bst2BI	CACGAG	1 cut(s)	1406
Bst2UI	CCWGG	2 cut(s)	785, 1333
Bst4CI	ACNGT	7 cut(s)	351, 717, 1349, 1709, 1910, 2151, 2430
Bst6I	CTCTTC	4 cut(s)	369, 1558, 1585, 2460
BstAPI	GCANNNNNTGC	1 cut(s)	886
BstC8I	GCNNGC	5 cut(s)	298, 671, 1017, 1035, 2325
BstDSI	CCRYGG	3 cut(s)	51, 159, 363
BstENI	CCTNNNNNAGG	1 cut(s)	433
BstMAI	GTCTC	3 cut(s)	641, 2382, 2631
BstMWI	GCNNNNNNNGC	6 cut(s)	886, 2062, 2071, 2329, 2395, 2482
BstNI	CCWGG	2 cut(s)	785, 1333
BstNSI	RCATGY	3 cut(s)	202, 548, 1450
BstPAI	GACNNNNGTC	1 cut(s)	1911
BstSCI	CCNGG	2 cut(s)	783, 1331
BstSFI	CTRYAG	3 cut(s)	401, 1817, 2281
BstSLI	GKGCMC	2 cut(s)	271, 1168
BstV1I	GCAGC	7 cut(s)	608, 856, 1168, 1316, 1324, 1445, 2295
BstV2I	GAAGAC	4 cut(s)	486, 1866, 2034, 2265
BstX2I	RGATCY	3 cut(s)	43, 155, 285
BstXI	CCANNNNNNTGG	2 cut(s)	58, 370
BstYI	RGATCY	3 cut(s)	43, 155, 285
BsuI	GTATCC	4 cut(s)	952, 1213, 1291, 2362
BsuRI	GGCC	6 cut(s)	56, 362, 783, 1053, 1645, 1704
BtgI	CCRYGG	3 cut(s)	51, 159, 363
BtrI	CACGTC	1 cut(s)	2497
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	5 cut(s)	129, 999, 1705, 1714, 2617
BveI	ACCTGC	2 cut(s)	408, 1240
Cac8I	GCNNGC	5 cut(s)	298, 671, 1017, 1035, 2325
CaiI	CAGNNNCTG	2 cut(s)	2111, 2380
CciI	TCATGA	2 cut(s)	1069, 2230
Cfr13I	GGNCC	6 cut(s)	360, 577, 781, 1027, 1666, 2371
Csp6I	GTAC	9 cut(s)	202, 624, 822, 1290, 1808, 1934, 1958, 2236, 2242
CspCI	CAANNNNNGTGG	2 cut(s)	1785, 1820
CviQI	GTAC	9 cut(s)	202, 624, 822, 1290, 1808, 1934, 1958, 2236, 2242
DraI	TTTAAA	1 cut(s)	355
EaeI	YGGCCR	1 cut(s)	1702
Eam1104I	CTCTTC	4 cut(s)	369, 1558, 1585, 2460
EarI	CTCTTC	4 cut(s)	369, 1558, 1585, 2460
Ecl136II	GAGCTC	1 cut(s)	2323
Eco130I	CCWWGG	6 cut(s)	51, 57, 159, 363, 515, 2034
Eco24I	GRGCYC	1 cut(s)	2325
Eco31I	GGTCTC	1 cut(s)	2631
Eco47I	GGWCC	4 cut(s)	577, 1027, 1666, 2371
Eco53kI	GAGCTC	1 cut(s)	2323
Eco57I	CTGAAG	1 cut(s)	396
EcoICRI	GAGCTC	1 cut(s)	2323
EcoNI	CCTNNNNNAGG	1 cut(s)	433
EcoO109I	RGGNCCY	1 cut(s)	1027
EcoRI	GAATTC	3 cut(s)	1865, 2199, 2489
EcoRII	CCWGG	2 cut(s)	783, 1331
EcoT14I	CCWWGG	6 cut(s)	51, 57, 159, 363, 515, 2034
EcoT22I	ATGCAT	1 cut(s)	1452
EcoT38I	GRGCYC	1 cut(s)	2325
ErhI	CCWWGG	6 cut(s)	51, 57, 159, 363, 515, 2034
FalI	AAGNNNNNCTT	4 cut(s)	968, 1000, 2085, 2117
FaqI	GGGAC	1 cut(s)	1883
FauNDI	CATATG	3 cut(s)	420, 1452, 2649
FbaI	TGATCA	1 cut(s)	1951
FblI	GTMKAC	1 cut(s)	952
Fnu4HI	GCNGC	7 cut(s)	597, 870, 1157, 1305, 1313, 1434, 2284
FriOI	GRGCYC	1 cut(s)	2325
Fsp4HI	GCNGC	7 cut(s)	597, 870, 1157, 1305, 1313, 1434, 2284
FspBI	CTAG	7 cut(s)	458, 1415, 1509, 1560, 1895, 2211, 2478
GluI	GCNGC	7 cut(s)	597, 870, 1157, 1305, 1313, 1434, 2284
HaeIII	GGCC	6 cut(s)	56, 362, 783, 1053, 1645, 1704
HincII	GTYRAC	2 cut(s)	196, 1638
HindII	GTYRAC	2 cut(s)	196, 1638
HindIII	AAGCTT	2 cut(s)	408, 2359
HinfI	GANTC	9 cut(s)	139, 377, 447, 754, 934, 979, 1411, 1475, 2181
HphI	GGTGA	4 cut(s)	85, 488, 941, 1983
Hpy166II	GTNNAC	5 cut(s)	196, 397, 953, 1638, 2615
Hpy8I	GTNNAC	5 cut(s)	196, 397, 953, 1638, 2615
Hpy99I	CGWCG	1 cut(s)	2498
HpyAV	CCTTC	7 cut(s)	337, 564, 962, 1507, 1543, 2129, 2341
HpyCH4III	ACNGT	7 cut(s)	351, 717, 1349, 1709, 1910, 2151, 2430
HpyCH4IV	ACGT	1 cut(s)	2496
HpyF10VI	GCNNNNNNNGC	6 cut(s)	886, 2062, 2071, 2329, 2395, 2482
HpySE526I	ACGT	1 cut(s)	2496
Ksp22I	TGATCA	1 cut(s)	1951
LmnI	GCTCC	8 cut(s)	80, 305, 866, 1712, 1840, 1970, 2062, 2509
Lsp1109I	GCAGC	7 cut(s)	608, 856, 1168, 1316, 1324, 1445, 2295
LweI	GCATC	2 cut(s)	978, 2341
MaeI	CTAG	7 cut(s)	458, 1415, 1509, 1560, 1895, 2211, 2478
MaeII	ACGT	1 cut(s)	2496
MaeIII	GTNAC	5 cut(s)	1114, 1606, 1672, 1850, 2548
MfeI	CAATTG	1 cut(s)	2057
MflI	RGATCY	3 cut(s)	43, 155, 285
MhlI	GDGCHC	4 cut(s)	271, 1168, 2325, 2610
MlsI	TGGCCA	1 cut(s)	1704
MluNI	TGGCCA	1 cut(s)	1704
MlyI	GAGTC	3 cut(s)	386, 1469, 2175
MmeI	TCCRAC	2 cut(s)	1320, 1794
Mox20I	TGGCCA	1 cut(s)	1704
Mph1103I	ATGCAT	1 cut(s)	1452
MroXI	GAANNNNTTC	3 cut(s)	103, 2075, 2118
MscI	TGGCCA	1 cut(s)	1704
MseI	TTAA	7 cut(s)	312, 354, 915, 1365, 2004, 2265, 2394
MslI	CAYNNNNRTG	2 cut(s)	1451, 1455
Msp20I	TGGCCA	1 cut(s)	1704
MspA1I	CMGCKG	1 cut(s)	1436
MspR9I	CCNGG	2 cut(s)	785, 1333
MunI	CAATTG	1 cut(s)	2057
Mva1269I	GAATGC	4 cut(s)	393, 673, 1497, 2487
MvaI	CCWGG	2 cut(s)	785, 1333
MwoI	GCNNNNNNNGC	6 cut(s)	886, 2062, 2071, 2329, 2395, 2482
NcoI	CCATGG	3 cut(s)	51, 159, 363
NdeI	CATATG	3 cut(s)	420, 1452, 2649
NlaIV	GGNNCC	6 cut(s)	82, 157, 361, 1836, 2011, 2511
NmuCI	GTSAC	5 cut(s)	1114, 1606, 1672, 1850, 2548
NsiI	ATGCAT	1 cut(s)	1452
NspI	RCATGY	3 cut(s)	202, 548, 1450
PagI	TCATGA	2 cut(s)	1069, 2230
PciI	ACATGT	1 cut(s)	198
PctI	GAATGC	4 cut(s)	393, 673, 1497, 2487
PdmI	GAANNNNTTC	3 cut(s)	103, 2075, 2118
PfeI	GAWTC	6 cut(s)	139, 447, 754, 934, 979, 1411
PflMI	CCANNNNNTGG	2 cut(s)	1967, 2380
PkrI	GCNGC	7 cut(s)	598, 871, 1158, 1306, 1314, 1435, 2285
PleI	GAGTC	3 cut(s)	385, 1469, 2175
PpsI	GAGTC	3 cut(s)	385, 1469, 2175
PpuMI	RGGWCCY	1 cut(s)	1027
PscI	ACATGT	1 cut(s)	198
PshAI	GACNNNNGTC	1 cut(s)	1911
Psp124BI	GAGCTC	1 cut(s)	2325
Psp5II	RGGWCCY	1 cut(s)	1027
Psp6I	CCWGG	2 cut(s)	783, 1331
PspGI	CCWGG	2 cut(s)	783, 1331
PspN4I	GGNNCC	6 cut(s)	82, 157, 361, 1836, 2011, 2511
PspPI	GGNCC	6 cut(s)	360, 577, 781, 1027, 1666, 2371
PspPPI	RGGWCCY	1 cut(s)	1027
PstI	CTGCAG	2 cut(s)	405, 2285
PstNI	CAGNNNCTG	2 cut(s)	2111, 2380
PsuI	RGATCY	3 cut(s)	43, 155, 285
PvuII	CAGCTG	1 cut(s)	1436
RsaI	GTAC	9 cut(s)	203, 625, 823, 1291, 1809, 1935, 1959, 2237, 2243
RsaNI	GTAC	9 cut(s)	202, 624, 822, 1290, 1808, 1934, 1958, 2236, 2242
RseI	CAYNNNNRTG	2 cut(s)	1451, 1455
SacI	GAGCTC	1 cut(s)	2325
SaqAI	TTAA	7 cut(s)	312, 354, 915, 1365, 2004, 2265, 2394
SatI	GCNGC	7 cut(s)	597, 870, 1157, 1305, 1313, 1434, 2284
Sau96I	GGNCC	6 cut(s)	360, 577, 781, 1027, 1666, 2371
SbfI	CCTGCAGG	1 cut(s)	405
SchI	GAGTC	3 cut(s)	386, 1469, 2175
ScrFI	CCNGG	2 cut(s)	785, 1333
SdaI	CCTGCAGG	1 cut(s)	405
SduI	GDGCHC	4 cut(s)	271, 1168, 2325, 2610
SfaNI	GCATC	2 cut(s)	978, 2341
SfcI	CTRYAG	3 cut(s)	401, 1817, 2281
SinI	GGWCC	4 cut(s)	577, 1027, 1666, 2371
SmiMI	CAYNNNNRTG	2 cut(s)	1451, 1455
SmlI	CTYRAG	5 cut(s)	71, 382, 581, 1055, 2123
SmoI	CTYRAG	5 cut(s)	71, 382, 581, 1055, 2123
Sse8387I	CCTGCAGG	1 cut(s)	405
SspMI	CTAG	7 cut(s)	458, 1415, 1509, 1560, 1895, 2211, 2478
SstI	GAGCTC	1 cut(s)	2325
StyD4I	CCNGG	2 cut(s)	783, 1331
StyI	CCWWGG	6 cut(s)	51, 57, 159, 363, 515, 2034
TaaI	ACNGT	7 cut(s)	351, 717, 1349, 1709, 1910, 2151, 2430
TaiI	ACGT	1 cut(s)	2499
TaqI	TCGA	5 cut(s)	445, 1588, 1792, 2184, 2493
TatI	WGTACW	4 cut(s)	201, 1289, 2235, 2241
TfiI	GAWTC	6 cut(s)	139, 447, 754, 934, 979, 1411
Tru1I	TTAA	7 cut(s)	312, 354, 915, 1365, 2004, 2265, 2394
Tru9I	TTAA	7 cut(s)	312, 354, 915, 1365, 2004, 2265, 2394
TscAI	CASTG	5 cut(s)	129, 1006, 1705, 1714, 2617
TseFI	GTSAC	5 cut(s)	1114, 1606, 1672, 1850, 2548
TseI	GCWGC	7 cut(s)	596, 869, 1156, 1304, 1312, 1433, 2283
Tsp45I	GTSAC	5 cut(s)	1114, 1606, 1672, 1850, 2548
TspGWI	ACGGA	1 cut(s)	641
TspRI	CASTG	5 cut(s)	129, 1006, 1705, 1714, 2617
Van91I	CCANNNNNTGG	2 cut(s)	1967, 2380
VpaK11BI	GGWCC	4 cut(s)	577, 1027, 1666, 2371
XagI	CCTNNNNNAGG	1 cut(s)	433
XapI	RAATTY	7 cut(s)	238, 1489, 1581, 1865, 1918, 2199, 2489
XceI	RCATGY	3 cut(s)	202, 548, 1450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2056
XmiI	GTMKAC	1 cut(s)	952
XmnI	GAANNNNTTC	3 cut(s)	103, 2075, 2118
XspI	CTAG	7 cut(s)	458, 1415, 1509, 1560, 1895, 2211, 2478
Zsp2I	ATGCAT	1 cut(s)	1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.