Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001727

Physical Location & Seq

Genomic Coordinates Reverse (-)

57097334 .. 57102731

Gene Structure 5398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG346200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2640 bp

ATGGTTGCTTATGGGAGAGGTGGGAACTCAGGACAAATAGTAGATCTTTCCATGGCCTTGGCTTTTGCACTTGAGAATGGAGCCACAAAACTCACCAGAACAAGTTCATCAAGCAAAAGTTCAGTGATGGGGTTTCTGAATCAAATTGGTAGGGGATCCATGGAAAGAAAGGGAAATGTCAACATGTACTGGGGTTCAAGTAGTCAGTTCCCTAACCTTTCAAATTTCCATATAGAAGAAATATCCAGAGGGGCACAGAAACTAAACCAGATCCTTAGAGCTTGCTCCAATGGTGTTAATGTTGATAAGTTTTCAATAGAGATCGGGAAGGAACTGTTTAAAGGGGCCATGGATTTGGAAGAGTCCTTGAGAATGCTTGTGAACCTGCAGGAAGCTTCAGAACATATGAACACCTCCCAAAGGAAAAGTCGAATCACATTGCTAGACGAAGATGAAGATGGTGAAGACCAAATAGAAGAACAAAAGCAACTGGCTCTGCCAAGGTTTTCCTTTGACAAATCAACAAGACATGCTCGTAAAATCCAAGAAGTAGGAAGGATGGCCCTCAAGCCTAAGATGGCAGCTCTGACTTACCCCACAGGAGGTAGTACGGATGAGAAGCAAGGCAGAGAGACAGCAACCTCAGTTTCTCGCAGGCATTCAGTCAGCTATATCCCTGATGTCAAAAATCCATCAAAACAGTCAGACCAGAAAGTGTCTAAACCAGAAAAAGATAGGATTCCAAATGTTATTGCAAAGCTGATGGGCCTGGATGAGCTTCCCAAAAATGAAAACGCAAAATCCACCACCACACGGAAAGACAACATCCCCAAGAAACCAAGAGAAAGGGGAGCTGCAATAGGGCACACAATGCAGGAAAGCAGTAAGATTGCTGGTGTTAAGACCAAAGATGGTGAGAATCTGGTATCCACAAGTAGACAGAAAGTGGTAGAAGGCAATAAGAATCCATTGATGCAGAAAAACACTGCTTTTCTTCTGCAAGAAGAAAAGGTCCTGCCTGCCAACAACAATGTTGGCCTTGAGATGGTTATTCATGATGGAAAACAATCCTCAAAAGACTTGATGGGAATAAAACCTGTGACAAGATCAGGAAAGACTACCACCATGAAAACAGATAAGCAGCAAAGTGCCCAATTCAGACAGAACAGCAGTAAGAATAATCACGAAAGAGAAAGAAAGCAGGATACTATGAGGTATGGGGAACTAAAGTTGCAGGTAAGAAAACAACAAGATACTGAGATGCTATCCAAGAGCACATCCAACAAGGCAGCAAAGCAGCCTCACACAAGCCAAGCCAGGGTAAATAGAAACAGTATGATAGAAGTTGTTAATGCCGTGCAACCCAGAGGAGTTCCAAATGGCACTTACCACGAGAATCTAGTGAGAAGAAAAAGTTCAGCTGAATTGAACATCCATATGAATGATTTTCCTCAAAAGGACTCGGATCAAGAAAATTTAGGCATTCCACCAGCTAGGAAGGAGAAAGCTGTTCATCATGTAGCACCCTTACAGAAGGCAAAAACTAGAAGAGTGAATAAAAGTGAAATTCCTCGAAGAGTGGATGAAGTAGTGACCAGAAGAAATGGAACGCTGAATAAGTTGACAAGGCCACCAAAACAATCTATTTTGGAGCAAGTGACACATAGAACCCATGATAAAGTCAGTGGCCACAGTGGAGCAGAAAAGGGTAGAGCCAGCAGGTTGAAACAAGCAGAGCCACGCATAGTCAAGTCCAACAAATCAACAGAAAGCACTCGACCACTACATTTGGTACAGAACCTACAGAAAGAAGCTGAGGCTCCTACTTTCTATGGTCATAATGAAGACGAATTCCGAAGCCTCCGAGAACCAAAAACTCTAGTCCCACATGACAGTCGTCAAAATTCAATCTCAGTAGTACATAACGATCAACATGATCAAGTACCAATCTTTGGAGCTGATGAGTGCATTACATCACCAAATGCACTTAATGGAACCCAATCAACCCATGAAGACACCTTGGATATTTCATCCACATTGCAATTGGAGCAACAGAAGGCTTTCAAATGGAGAAAACAAGAGCCACTAAGAGAAACTGAAATCCTTCTCAAGCAGATAGTGATCCAGAGCCAACTGTTCCTCAACACAGCAGAGGCACTTTTCAGACTCGAAATCCCTTTCGGAATTCTCCACGCTAGTAGTAGCGACTACGATCATGAGTACAAGTACATCACTCATCCCGAAGACATTAAGCTCACATTAGACTGCAGCTACGAGATAATGAAAAGAAAAGGTAAAAGGCAAGAGCTCGCTGTGCATCCCAAGTTTGTGAAGGTATCCATAAGCTTCACTCAGGTCCAGTCTCTGGATGAGCTGGTTAAGCAGTTGAGTAAAGACATTGATAAGCTGAAACTGTATGGGAAGAATGGAAAACTGGAATGTGGGCCTGAAGAGTATGTGCCTAGAATGCTTGAATTCGACGTGAATAACAGGGAGCCTGAGCTGAATTGTATGTGGGATTTGGGTTGGGATGTGACCATGTTTGGGTTTGTTGAAGTGGATGAAGTTGTTAGGGATTTGGAGAGGGGTGTGCTCAGTGGACTTGTTGATGAGCTTACCAGAGACCTCTTTCATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VARLMGL

Protein Analysis

879

Amino Acids

99.43

Weight (kDa)

9.28

Isoelectric Point (pI)

46.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001727)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42710 AT5G42710 AT5G42710
fragaria_vesca	FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870 FvH4_2g39870
malus_domestica	MD08G1035200.v1.1 MD15G1031800.v1.1
prunus_persica	Prupe.1G380200_v2.0.a1
pyrus_communis	pycom08g02780 pycom15g02750
rosa_chinensis	RchiOBHm_Chr5g0052261 RchiOBHm_Chr6g0300941
rosa_laevigata	RLG00000011289 RLG00000034832 RLG00000034833
rosa_multiflora	Rmu_sc0006254.1_g000005 Rmu_sc0008947.1_g000011 Rmu_sc0008947.1_g000012 Rmu_sc0009513.1_g000003
rosa_roxburghii	Rroxscaffold_1G00028100 Rroxscaffold_7G00167300
rosa_rugosa	Rorug05G0273400 Rorug06G0299600 Rorug06G0299600 Rorug06G0299700
rosa_samantha	Rh5AG346200 Rh5BG356900 Rh5CG382200 Rh5CG382300 Rh5CG382400 Rh5DG372200 Rh6AG413200 Rh6AG413300 Rh6AG413400 Rh6AG413500 Rh6BG420400 Rh6BG420500 Rh6CG427900 Rh6CG428000 Rh6DG413200 Rh6DG413300
rosa_wichuraiana	Rw5G032650 Rw5G032690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	393, 1225, 1710
AccB7I	CCANNNNNTGG	2 cut(s)	1952, 2365
AccI	GTMKAC	1 cut(s)	937
AclWI	GGATC	5 cut(s)	150, 163, 265, 1473, 2116
AcoI	YGGCCR	1 cut(s)	1687
AcsI	RAATTY	7 cut(s)	223, 1474, 1566, 1850, 1903, 2184, 2474
AcuI	CTGAAG	2 cut(s)	381, 2469
AfaI	GTAC	7 cut(s)	188, 610, 1794, 1920, 1944, 2222, 2228
AfiI	CCNNNNNNNGG	8 cut(s)	420, 602, 813, 1045, 1318, 1952, 2365, 2544
AflIII	ACRYGT	1 cut(s)	183
AgsI	TTSAA	9 cut(s)	198, 222, 315, 1429, 1726, 1908, 2065, 2474, 2555
AjiI	CACGTC	1 cut(s)	2482
AjnI	CCWGG	2 cut(s)	768, 1316
Alw21I	GWGCWC	3 cut(s)	1277, 2310, 2595
Alw26I	GTCTC	3 cut(s)	626, 2367, 2616
AlwI	GGATC	5 cut(s)	150, 163, 265, 1473, 2116
AlwNI	CAGNNNCTG	1 cut(s)	2365
AoxI	GGCC	8 cut(s)	54, 345, 561, 766, 1036, 1628, 1687, 2444
ApeKI	GCWGC	6 cut(s)	581, 854, 1141, 1289, 1297, 2268
ApoI	RAATTY	7 cut(s)	223, 1474, 1566, 1850, 1903, 2184, 2474
ArsI	GACNNNNNNTTYG	2 cut(s)	412, 444
Asp700I	GAANNNNTTC	4 cut(s)	103, 1414, 2060, 2103
AspS9I	GGNCC	6 cut(s)	345, 562, 766, 1012, 2356, 2444
AsuHPI	GGTGA	4 cut(s)	85, 473, 926, 1968
AvaII	GGWCC	2 cut(s)	1012, 2356
BaeGI	GKGCMC	3 cut(s)	256, 867, 1153
BalI	TGGCCA	1 cut(s)	1689
BamHI	GGATCC	1 cut(s)	155
BanII	GRGCYC	1 cut(s)	2310
BauI	CACGAG	1 cut(s)	1391
BbsI	GAAGAC	4 cut(s)	471, 1851, 2019, 2250
Bbv12I	GWGCWC	3 cut(s)	1277, 2310, 2595
BbvCI	CCTCAGC	1 cut(s)	1815
BbvI	GCAGC	6 cut(s)	593, 841, 1153, 1301, 1309, 2280
BceAI	ACGGC	1 cut(s)	1340
BciT130I	CCWGG	2 cut(s)	770, 1318
BciVI	GTATCC	3 cut(s)	937, 1198, 2347
BclI	TGATCA	1 cut(s)	1936
BcoDI	GTCTC	3 cut(s)	626, 2367, 2616
BfaI	CTAG	7 cut(s)	443, 1400, 1494, 1545, 1880, 2196, 2463
BfmI	CTRYAG	3 cut(s)	386, 1802, 2266
BfuAI	ACCTGC	3 cut(s)	393, 1225, 1710
BfuI	GTATCC	3 cut(s)	937, 1198, 2347
BglII	AGATCT	1 cut(s)	43
BisI	GCNGC	6 cut(s)	582, 855, 1142, 1290, 1298, 2269
BlsI	GCNGC	6 cut(s)	583, 856, 1143, 1291, 1299, 2270
Bme1390I	CCNGG	2 cut(s)	770, 1318
Bme18I	GGWCC	2 cut(s)	1012, 2356
BmgBI	CACGTC	1 cut(s)	2482
BmgT120I	GGNCC	6 cut(s)	345, 562, 766, 1012, 2356, 2444
BmiI	GGNNCC	6 cut(s)	82, 157, 346, 1821, 1996, 2496
BmrFI	CCNGG	2 cut(s)	770, 1318
BmrI	ACTGGG	1 cut(s)	199
BmsI	GCATC	3 cut(s)	963, 1251, 2326
BmuI	ACTGGG	1 cut(s)	199
BoxI	GACNNNNGTC	1 cut(s)	1896
BpiI	GAAGAC	4 cut(s)	471, 1851, 2019, 2250
Bpu10I	CCTNAGC	2 cut(s)	1815, 2499
BpuEI	CTTGAG	5 cut(s)	92, 388, 551, 1061, 2093
BsaBI	GATNNNNATC	1 cut(s)	2120
BsaI	GGTCTC	1 cut(s)	2616
BsaJI	CCNNGG	7 cut(s)	51, 57, 159, 348, 500, 1317, 2019
Bsc4I	CCNNNNNNNGG	8 cut(s)	420, 602, 813, 1045, 1318, 1952, 2365, 2544
Bse1I	ACTGG	4 cut(s)	194, 495, 2359, 2439
Bse3DI	GCAATG	2 cut(s)	437, 2036
Bse8I	GATNNNNATC	1 cut(s)	2120
BseBI	CCWGG	2 cut(s)	770, 1318
BseDI	CCNNGG	7 cut(s)	51, 57, 159, 348, 500, 1317, 2019
BseJI	GATNNNNATC	1 cut(s)	2120
BseLI	CCNNNNNNNGG	8 cut(s)	420, 602, 813, 1045, 1318, 1952, 2365, 2544
BseMI	GCAATG	2 cut(s)	437, 2036
BseMII	CTCAG	8 cut(s)	42, 657, 1248, 1806, 1926, 2366, 2490, 2608
BseNI	ACTGG	4 cut(s)	194, 495, 2359, 2439
BseRI	GAGGAG	1 cut(s)	1383
BseSI	GKGCMC	3 cut(s)	256, 867, 1153
BseXI	GCAGC	6 cut(s)	593, 841, 1153, 1301, 1309, 2280
BshFI	GGCC	8 cut(s)	56, 347, 563, 768, 1038, 1630, 1689, 2446
BsiHKAI	GWGCWC	3 cut(s)	1277, 2310, 2595
BslFI	GGGAC	1 cut(s)	1868
BslI	CCNNNNNNNGG	8 cut(s)	420, 602, 813, 1045, 1318, 1952, 2365, 2544
BsmAI	GTCTC	3 cut(s)	626, 2367, 2616
BsmFI	GGGAC	1 cut(s)	1868
BsmI	GAATGC	4 cut(s)	378, 658, 1482, 2472
BsnI	GGCC	8 cut(s)	56, 347, 563, 768, 1038, 1630, 1689, 2446
Bso31I	GGTCTC	1 cut(s)	2616
Bsp1286I	GDGCHC	6 cut(s)	256, 867, 1153, 1277, 2310, 2595
Bsp19I	CCATGG	3 cut(s)	51, 159, 348
BspANI	GGCC	8 cut(s)	56, 347, 563, 768, 1038, 1630, 1689, 2446
BspCNI	CTCAG	8 cut(s)	41, 656, 1249, 1807, 1925, 2365, 2491, 2607
BspHI	TCATGA	2 cut(s)	1054, 2215
BspLI	GGNNCC	6 cut(s)	82, 157, 346, 1821, 1996, 2496
BspMAI	CTGCAG	2 cut(s)	390, 2270
BspMI	ACCTGC	3 cut(s)	393, 1225, 1710
BspPI	GGATC	5 cut(s)	150, 163, 265, 1473, 2116
BspTNI	GGTCTC	1 cut(s)	2616
BsrDI	GCAATG	2 cut(s)	437, 2036
BsrI	ACTGG	4 cut(s)	194, 495, 2359, 2439
BssECI	CCNNGG	7 cut(s)	51, 57, 159, 348, 500, 1317, 2019
BssSI	CACGAG	1 cut(s)	1391
BssT1I	CCWWGG	6 cut(s)	51, 57, 159, 348, 500, 2019
Bst2BI	CACGAG	1 cut(s)	1391
Bst2UI	CCWGG	2 cut(s)	770, 1318
Bst4CI	ACNGT	7 cut(s)	336, 702, 1334, 1694, 1895, 2136, 2415
Bst6I	CTCTTC	4 cut(s)	354, 1543, 1570, 2445
BstAPI	GCANNNNNTGC	1 cut(s)	871
BstC8I	GCNNGC	5 cut(s)	283, 656, 1020, 1717, 2310
BstDSI	CCRYGG	3 cut(s)	51, 159, 348
BstENI	CCTNNNNNAGG	1 cut(s)	418
BstMAI	GTCTC	3 cut(s)	626, 2367, 2616
BstMWI	GCNNNNNNNGC	5 cut(s)	871, 2047, 2314, 2380, 2467
BstNI	CCWGG	2 cut(s)	770, 1318
BstNSI	RCATGY	2 cut(s)	187, 533
BstPAI	GACNNNNGTC	1 cut(s)	1896
BstSCI	CCNGG	2 cut(s)	768, 1316
BstSFI	CTRYAG	3 cut(s)	386, 1802, 2266
BstSLI	GKGCMC	3 cut(s)	256, 867, 1153
BstV1I	GCAGC	6 cut(s)	593, 841, 1153, 1301, 1309, 2280
BstV2I	GAAGAC	4 cut(s)	471, 1851, 2019, 2250
BstX2I	RGATCY	3 cut(s)	43, 155, 270
BstXI	CCANNNNNNTGG	2 cut(s)	58, 355
BstYI	RGATCY	3 cut(s)	43, 155, 270
BsuI	GTATCC	3 cut(s)	937, 1198, 2347
BsuRI	GGCC	8 cut(s)	56, 347, 563, 768, 1038, 1630, 1689, 2446
BtgI	CCRYGG	3 cut(s)	51, 159, 348
BtrI	CACGTC	1 cut(s)	2482
BtsI	GCAGTG	1 cut(s)	984
BtsIMutI	CAGTG	5 cut(s)	129, 984, 1690, 1699, 2602
BveI	ACCTGC	3 cut(s)	393, 1225, 1710
Cac8I	GCNNGC	5 cut(s)	283, 656, 1020, 1717, 2310
CaiI	CAGNNNCTG	1 cut(s)	2365
CciI	TCATGA	2 cut(s)	1054, 2215
Cfr13I	GGNCC	6 cut(s)	345, 562, 766, 1012, 2356, 2444
Csp6I	GTAC	7 cut(s)	187, 609, 1793, 1919, 1943, 2221, 2227
CspCI	CAANNNNNGTGG	2 cut(s)	1770, 1805
CviQI	GTAC	7 cut(s)	187, 609, 1793, 1919, 1943, 2221, 2227
DraI	TTTAAA	1 cut(s)	340
EaeI	YGGCCR	1 cut(s)	1687
Eam1104I	CTCTTC	4 cut(s)	354, 1543, 1570, 2445
EarI	CTCTTC	4 cut(s)	354, 1543, 1570, 2445
Ecl136II	GAGCTC	1 cut(s)	2308
Eco130I	CCWWGG	6 cut(s)	51, 57, 159, 348, 500, 2019
Eco24I	GRGCYC	1 cut(s)	2310
Eco31I	GGTCTC	1 cut(s)	2616
Eco47I	GGWCC	2 cut(s)	1012, 2356
Eco53kI	GAGCTC	1 cut(s)	2308
Eco57I	CTGAAG	2 cut(s)	381, 2469
EcoICRI	GAGCTC	1 cut(s)	2308
EcoNI	CCTNNNNNAGG	1 cut(s)	418
EcoO109I	RGGNCCY	1 cut(s)	1012
EcoRI	GAATTC	3 cut(s)	1850, 2184, 2474
EcoRII	CCWGG	2 cut(s)	768, 1316
EcoT14I	CCWWGG	6 cut(s)	51, 57, 159, 348, 500, 2019
EcoT38I	GRGCYC	1 cut(s)	2310
ErhI	CCWWGG	6 cut(s)	51, 57, 159, 348, 500, 2019
FaqI	GGGAC	1 cut(s)	1868
FauNDI	CATATG	3 cut(s)	405, 1437, 2634
FbaI	TGATCA	1 cut(s)	1936
FblI	GTMKAC	1 cut(s)	937
Fnu4HI	GCNGC	6 cut(s)	582, 855, 1142, 1290, 1298, 2269
FriOI	GRGCYC	1 cut(s)	2310
Fsp4HI	GCNGC	6 cut(s)	582, 855, 1142, 1290, 1298, 2269
FspBI	CTAG	7 cut(s)	443, 1400, 1494, 1545, 1880, 2196, 2463
GluI	GCNGC	6 cut(s)	582, 855, 1142, 1290, 1298, 2269
HaeIII	GGCC	8 cut(s)	56, 347, 563, 768, 1038, 1630, 1689, 2446
HincII	GTYRAC	2 cut(s)	181, 1623
HindII	GTYRAC	2 cut(s)	181, 1623
HindIII	AAGCTT	2 cut(s)	393, 2344
HinfI	GANTC	9 cut(s)	139, 362, 432, 739, 919, 964, 1396, 1460, 2166
HphI	GGTGA	4 cut(s)	85, 473, 926, 1968
Hpy166II	GTNNAC	5 cut(s)	181, 382, 938, 1623, 2600
Hpy8I	GTNNAC	5 cut(s)	181, 382, 938, 1623, 2600
Hpy99I	CGWCG	1 cut(s)	2483
HpyAV	CCTTC	8 cut(s)	322, 549, 947, 1492, 1528, 2050, 2114, 2326
HpyCH4III	ACNGT	7 cut(s)	336, 702, 1334, 1694, 1895, 2136, 2415
HpyCH4IV	ACGT	1 cut(s)	2481
HpyF10VI	GCNNNNNNNGC	5 cut(s)	871, 2047, 2314, 2380, 2467
HpySE526I	ACGT	1 cut(s)	2481
Ksp22I	TGATCA	1 cut(s)	1936
LmnI	GCTCC	9 cut(s)	80, 290, 851, 1651, 1697, 1825, 1955, 2047, 2494
Lsp1109I	GCAGC	6 cut(s)	593, 841, 1153, 1301, 1309, 2280
LweI	GCATC	3 cut(s)	963, 1251, 2326
MaeI	CTAG	7 cut(s)	443, 1400, 1494, 1545, 1880, 2196, 2463
MaeII	ACGT	1 cut(s)	2481
MaeIII	GTNAC	4 cut(s)	1099, 1591, 1657, 2533
MfeI	CAATTG	1 cut(s)	2042
MflI	RGATCY	3 cut(s)	43, 155, 270
MhlI	GDGCHC	6 cut(s)	256, 867, 1153, 1277, 2310, 2595
MlsI	TGGCCA	1 cut(s)	1689
MluNI	TGGCCA	1 cut(s)	1689
MlyI	GAGTC	3 cut(s)	371, 1454, 2160
MmeI	TCCRAC	2 cut(s)	1305, 1779
Mox20I	TGGCCA	1 cut(s)	1689
MroXI	GAANNNNTTC	4 cut(s)	103, 1414, 2060, 2103
MscI	TGGCCA	1 cut(s)	1689
MseI	TTAA	7 cut(s)	297, 339, 900, 1350, 1989, 2250, 2379
MslI	CAYNNNNRTG	2 cut(s)	1436, 1440
Msp20I	TGGCCA	1 cut(s)	1689
MspA1I	CMGCKG	1 cut(s)	1421
MspR9I	CCNGG	2 cut(s)	770, 1318
MunI	CAATTG	1 cut(s)	2042
Mva1269I	GAATGC	4 cut(s)	378, 658, 1482, 2472
MvaI	CCWGG	2 cut(s)	770, 1318
MwoI	GCNNNNNNNGC	5 cut(s)	871, 2047, 2314, 2380, 2467
NcoI	CCATGG	3 cut(s)	51, 159, 348
NdeI	CATATG	3 cut(s)	405, 1437, 2634
NlaIV	GGNNCC	6 cut(s)	82, 157, 346, 1821, 1996, 2496
NmuCI	GTSAC	4 cut(s)	1099, 1591, 1657, 2533
NspI	RCATGY	2 cut(s)	187, 533
PagI	TCATGA	2 cut(s)	1054, 2215
PciI	ACATGT	1 cut(s)	183
PctI	GAATGC	4 cut(s)	378, 658, 1482, 2472
PdmI	GAANNNNTTC	4 cut(s)	103, 1414, 2060, 2103
PfeI	GAWTC	6 cut(s)	139, 432, 739, 919, 964, 1396
PflMI	CCANNNNNTGG	2 cut(s)	1952, 2365
PkrI	GCNGC	6 cut(s)	583, 856, 1143, 1291, 1299, 2270
PleI	GAGTC	3 cut(s)	370, 1454, 2160
PpsI	GAGTC	3 cut(s)	370, 1454, 2160
PpuMI	RGGWCCY	1 cut(s)	1012
PscI	ACATGT	1 cut(s)	183
PshAI	GACNNNNGTC	1 cut(s)	1896
Psp124BI	GAGCTC	1 cut(s)	2310
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	2 cut(s)	768, 1316
PspGI	CCWGG	2 cut(s)	768, 1316
PspN4I	GGNNCC	6 cut(s)	82, 157, 346, 1821, 1996, 2496
PspPI	GGNCC	6 cut(s)	345, 562, 766, 1012, 2356, 2444
PspPPI	RGGWCCY	1 cut(s)	1012
PstI	CTGCAG	2 cut(s)	390, 2270
PstNI	CAGNNNCTG	1 cut(s)	2365
PsuI	RGATCY	3 cut(s)	43, 155, 270
PvuII	CAGCTG	1 cut(s)	1421
RsaI	GTAC	7 cut(s)	188, 610, 1794, 1920, 1944, 2222, 2228
RsaNI	GTAC	7 cut(s)	187, 609, 1793, 1919, 1943, 2221, 2227
RseI	CAYNNNNRTG	2 cut(s)	1436, 1440
SacI	GAGCTC	1 cut(s)	2310
SaqAI	TTAA	7 cut(s)	297, 339, 900, 1350, 1989, 2250, 2379
SatI	GCNGC	6 cut(s)	582, 855, 1142, 1290, 1298, 2269
Sau96I	GGNCC	6 cut(s)	345, 562, 766, 1012, 2356, 2444
SbfI	CCTGCAGG	1 cut(s)	390
SchI	GAGTC	3 cut(s)	371, 1454, 2160
ScrFI	CCNGG	2 cut(s)	770, 1318
SdaI	CCTGCAGG	1 cut(s)	390
SduI	GDGCHC	6 cut(s)	256, 867, 1153, 1277, 2310, 2595
SfaNI	GCATC	3 cut(s)	963, 1251, 2326
SfcI	CTRYAG	3 cut(s)	386, 1802, 2266
SinI	GGWCC	2 cut(s)	1012, 2356
SmiMI	CAYNNNNRTG	2 cut(s)	1436, 1440
SmlI	CTYRAG	5 cut(s)	71, 367, 566, 1040, 2108
SmoI	CTYRAG	5 cut(s)	71, 367, 566, 1040, 2108
Sse8387I	CCTGCAGG	1 cut(s)	390
SspMI	CTAG	7 cut(s)	443, 1400, 1494, 1545, 1880, 2196, 2463
SstI	GAGCTC	1 cut(s)	2310
StyD4I	CCNGG	2 cut(s)	768, 1316
StyI	CCWWGG	6 cut(s)	51, 57, 159, 348, 500, 2019
TaaI	ACNGT	7 cut(s)	336, 702, 1334, 1694, 1895, 2136, 2415
TaiI	ACGT	1 cut(s)	2484
TaqI	TCGA	5 cut(s)	430, 1573, 1777, 2169, 2478
TatI	WGTACW	4 cut(s)	186, 1918, 2220, 2226
TfiI	GAWTC	6 cut(s)	139, 432, 739, 919, 964, 1396
Tru1I	TTAA	7 cut(s)	297, 339, 900, 1350, 1989, 2250, 2379
Tru9I	TTAA	7 cut(s)	297, 339, 900, 1350, 1989, 2250, 2379
TscAI	CASTG	5 cut(s)	129, 991, 1690, 1699, 2602
TseFI	GTSAC	4 cut(s)	1099, 1591, 1657, 2533
TseI	GCWGC	6 cut(s)	581, 854, 1141, 1289, 1297, 2268
Tsp45I	GTSAC	4 cut(s)	1099, 1591, 1657, 2533
TspGWI	ACGGA	2 cut(s)	626, 829
TspRI	CASTG	5 cut(s)	129, 991, 1690, 1699, 2602
Van91I	CCANNNNNTGG	2 cut(s)	1952, 2365
VpaK11BI	GGWCC	2 cut(s)	1012, 2356
XagI	CCTNNNNNAGG	1 cut(s)	418
XapI	RAATTY	7 cut(s)	223, 1474, 1566, 1850, 1903, 2184, 2474
XceI	RCATGY	2 cut(s)	187, 533
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2041
XmiI	GTMKAC	1 cut(s)	937
XmnI	GAANNNNTTC	4 cut(s)	103, 1414, 2060, 2103
XspI	CTAG	7 cut(s)	443, 1400, 1494, 1545, 1880, 2196, 2463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.