Prupe.1G282800_v2.0.a1

heparanase-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
28525961 .. 28528673
2713 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G282800.1

Sequence Viewer

Length: 1581 bp
ATGTGGAAAAAGATGGTCAGACTCAGAGCACTTATATGCTGTATCTTTGTATCTTGGTTTTCATTATCTTTAGCTGAATATGTTGAAGTCAGCGTTGGAGGGGTTACTTCAATAGCCAGCACAGATGATAATTTCATATGTGCAACTCTGGACTGGTGGCCAACTAACAAATGTGACTACAATCAGTGTCCATGGGGAAAGGCTGGCATCTTCAATCTGGATTTGGATAACAAGATCTTGAACAATGCTATCAAGGCTTTCAATCCAATGAGAATCAGAGTTGGAGGCTCATTGCAAGATCAGGTGAATTATGGTGTTGGATATGGAGTTAAATCATGTGAAGGTTTCAAAAAACAAGAGTCTGGTTTGTTCGGGTTCAGTGATGCTTGCCTTGACCGGAAAAGATGGGATGAGCTCAATGACTTCTTTAACAATACAAAAGCTAAAATCACATTTGGGCTGAATGCCCTCCAAGGGAAGCAAGTGTCTCCCAAAGACAAAAGTCTCCGTATTGGTGACTGGAACCCGCAAAACTCTCGTGATCTCATGGAGTACACTATTGCAAAGGGATACCAGATTGATTCATATGAGCTTGGAAATGAGCTAGCCGGGAGTGGGGTTGCTGCAAGGATAGAAAGTGATCAATATGCAAAAGACATCAAAAAACTCAAAGAAGTTGTGACAGAATTGTACCCGGATGCCTCTAAACGACCAAAGATTATAGGCCCAGCAAGTTTTTATGACAAAAAATGGTATGAAAACTTCCTGCAGGCTACAGGACCCGGTGTCGTAGACGCGGTAACTCATCACCTCTACAATCTTGGTGCAGGTGTTGATCCCACCCTTATCGACAGGGTTCAAAACCCATTTTTCCTTTCAGAGATAGCTCAGACATTTTATGATCTGTCAAATACAATCAAGGAGTTTGGGCCATGGTCAGAAGCTTGGGTTGGGGAAGCAGGTGGAGCTTATAACAGTGGTGGCAAAGATGTGTCACATACCTTTGCTAATGGCTTCTGGTACTTGGACCAACTTGGCATGACATCAACCTACAGCCATAAGGTTTACTGCAGACAAGCCTTGATTGGAGGGAACTATGCTCTTCTTAATACCACAACATTCATCCCTAATCCGGACTATTATGGTGCTCTTTTGTGGCATCGACTAATGGGAAATAGGGTGCTCTCCACCACGCACCTTGGCTCCCCTTATTTGCGTGCATATTCCCATTGCTCAAAGAATCAGAAGGGTATCACTCTAGTCTTGATCAACATGTCCAACACAACCACTTTCGACGTTGCTGTCCTCCCCGACTACAATTTGTATCTGGGGCCAATACGGATGAGAAAGCATGGTCATATAGTTGGACGAGAAAGAGAAGAGTATCATTTGACACCAGAAGGTGGCAACATTCAAAGCGATGTGGTGCTGCTCAATGGAAATCCTTTGAAGCTCACAAATTCATCAGACATTCCTAAAATGGAACCAAAACTTGTGGATCCTACCTCTGCCATCAGTGTTGCAGCTGATTCAATTGTCTTTGTATCTATTAAAGACTTCCATGCCCCTGCTTGCGCTTAG

Protein Analysis

527

Amino Acids

58.65

Weight (kDa)

6.83

Isoelectric Point (pI)

29.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 972
AarI CACCTGC 2 cut(s) 818, 950
AasI GACNNNNNNGTC 1 cut(s) 1301
Acc36I ACCTGC 2 cut(s) 818, 950
AccB7I CCANNNNNTGG 1 cut(s) 1403
AccI GTMKAC 1 cut(s) 792
AccII CGCG 1 cut(s) 797
AccIII TCCGGA 1 cut(s) 1132
AciI CCGC 2 cut(s) 527, 797
AclWI GGATC 3 cut(s) 830, 1493, 1506
AcoI YGGCCR 1 cut(s) 158
AcsI RAATTY 1 cut(s) 1459
AfaI GTAC 3 cut(s) 554, 692, 1022
AfiI CCNNNNNNNGG 4 cut(s) 474, 615, 1132, 1403
AflIII ACRYGT 1 cut(s) 1272
AhdI GACNNNNNGTC 1 cut(s) 785
AjuI GAANNNNNNNTTGG 4 cut(s) 78, 110, 933, 965
Alw21I GWGCWC 4 cut(s) 31, 417, 1150, 1185
Alw26I GTCTC 2 cut(s) 492, 509
AlwI GGATC 3 cut(s) 830, 1493, 1506
Aor13HI TCCGGA 1 cut(s) 1132
AoxI GGCC 4 cut(s) 158, 724, 929, 1331
ApeKI GCWGC 3 cut(s) 623, 1429, 1523
ApoI RAATTY 1 cut(s) 1459
AspLEI GCGC 1 cut(s) 1577
AspS9I GGNCC 5 cut(s) 725, 779, 929, 1027, 1331
AsuC2I CCSGG 3 cut(s) 610, 695, 783
AsuHPI GGTGA 3 cut(s) 316, 527, 800
AsuNHI GCTAGC 1 cut(s) 604
AvaII GGWCC 2 cut(s) 779, 1027
BalI TGGCCA 1 cut(s) 160
BamHI GGATCC 1 cut(s) 1498
BanII GRGCYC 1 cut(s) 417
BarI GAAGNNNNNNTAC 2 cut(s) 746, 778
BauI CACGAG 1 cut(s) 537
Bbv12I GWGCWC 4 cut(s) 31, 417, 1150, 1185
BbvI GCAGC 3 cut(s) 610, 1416, 1535
BccI CCATC 3 cut(s) 7, 399, 1520
BcgI CGANNNNNNTGC 2 cut(s) 518, 552
BciVI GTATCC 1 cut(s) 563
BclI TGATCA 2 cut(s) 640, 1266
BcnI CCSGG 3 cut(s) 610, 695, 783
BcoDI GTCTC 2 cut(s) 492, 509
BfaI CTAG 2 cut(s) 605, 1259
BfmI CTRYAG 4 cut(s) 767, 774, 1051, 1069
BfuAI ACCTGC 2 cut(s) 818, 950
BfuI GTATCC 1 cut(s) 563
BglII AGATCT 1 cut(s) 234
BisI GCNGC 3 cut(s) 624, 1430, 1524
BlsI GCNGC 3 cut(s) 625, 1431, 1525
Bme1390I CCNGG 3 cut(s) 610, 695, 783
Bme18I GGWCC 2 cut(s) 779, 1027
BmeRI GACNNNNNGTC 1 cut(s) 785
BmgT120I GGNCC 5 cut(s) 725, 779, 929, 1027, 1331
BmiI GGNNCC 6 cut(s) 524, 781, 1204, 1332, 1485, 1500
BmrFI CCNGG 3 cut(s) 610, 695, 783
BmsI GCATC 4 cut(s) 216, 373, 688, 1168
BmtI GCTAGC 1 cut(s) 608
BoxI GACNNNNGTC 1 cut(s) 501
BpuMI CCSGG 3 cut(s) 610, 695, 783
BsaJI CCNNGG 4 cut(s) 191, 472, 932, 1198
BsaWI WCCGGW 2 cut(s) 396, 1132
BsaXI ACNNNNNCTCC 2 cut(s) 1187, 1217
Bsc4I CCNNNNNNNGG 4 cut(s) 474, 615, 1132, 1403
Bse1I ACTGG 2 cut(s) 158, 524
Bse3DI GCAATG 2 cut(s) 290, 1228
BseAI TCCGGA 1 cut(s) 1132
BseDI CCNNGG 4 cut(s) 191, 472, 932, 1198
BseGI GGATG 4 cut(s) 415, 703, 1122, 1347
BseLI CCNNNNNNNGG 4 cut(s) 474, 615, 1132, 1403
BseMI GCAATG 2 cut(s) 290, 1228
BseMII CTCAG 2 cut(s) 37, 902
BseNI ACTGG 2 cut(s) 158, 524
BseXI GCAGC 3 cut(s) 610, 1416, 1535
BseYI CCCAGC 1 cut(s) 727
BsgI GTGCAG 1 cut(s) 846
Bsh1236I CGCG 1 cut(s) 797
BshFI GGCC 4 cut(s) 160, 726, 931, 1333
BsiHKAI GWGCWC 4 cut(s) 31, 417, 1150, 1185
BsiSI CCGG 5 cut(s) 397, 609, 695, 783, 1133
BslI CCNNNNNNNGG 4 cut(s) 474, 615, 1132, 1403
BsmAI GTCTC 2 cut(s) 492, 509
BsmI GAATGC 1 cut(s) 469
BsnI GGCC 4 cut(s) 160, 726, 931, 1333
Bsp1286I GDGCHC 4 cut(s) 31, 417, 1150, 1185
Bsp13I TCCGGA 1 cut(s) 1132
Bsp143I GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
Bsp19I CCATGG 2 cut(s) 191, 932
BspACI CCGC 2 cut(s) 527, 797
BspANI GGCC 4 cut(s) 160, 726, 931, 1333
BspCNI CTCAG 2 cut(s) 36, 901
BspEI TCCGGA 1 cut(s) 1132
BspFNI CGCG 1 cut(s) 797
BspLI GGNNCC 6 cut(s) 524, 781, 1204, 1332, 1485, 1500
BspMAI CTGCAG 2 cut(s) 771, 1073
BspMI ACCTGC 2 cut(s) 818, 950
BspOI GCTAGC 1 cut(s) 608
BspPI GGATC 3 cut(s) 830, 1493, 1506
BspQI GCTCTTC 1 cut(s) 1107
BsrDI GCAATG 2 cut(s) 290, 1228
BsrI ACTGG 2 cut(s) 158, 524
BssECI CCNNGG 4 cut(s) 191, 472, 932, 1198
BssMI GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
BssSI CACGAG 1 cut(s) 537
BssT1I CCWWGG 4 cut(s) 191, 472, 932, 1198
Bst2BI CACGAG 1 cut(s) 537
Bst4CI ACNGT 1 cut(s) 977
Bst6I CTCTTC 2 cut(s) 1107, 1374
BstC8I GCNNGC 7 cut(s) 118, 205, 388, 606, 771, 1218, 1573
BstDEI CTNAG 3 cut(s) 23, 888, 1578
BstDSI CCRYGG 2 cut(s) 191, 932
BstF5I GGATG 4 cut(s) 415, 703, 1122, 1347
BstFNI CGCG 1 cut(s) 797
BstHHI GCGC 1 cut(s) 1577
BstKTI GATC 8 cut(s) 237, 301, 544, 643, 838, 904, 1269, 1501
BstMAI GTCTC 2 cut(s) 492, 509
BstMBI GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
BstMWI GCNNNNNNNGC 2 cut(s) 254, 965
BstNSI RCATGY 1 cut(s) 1276
BstPAI GACNNNNGTC 1 cut(s) 501
BstSCI CCNGG 3 cut(s) 608, 693, 781
BstSFI CTRYAG 4 cut(s) 767, 774, 1051, 1069
BstUI CGCG 1 cut(s) 797
BstV1I GCAGC 3 cut(s) 610, 1416, 1535
BstX2I RGATCY 2 cut(s) 234, 1498
BstYI RGATCY 2 cut(s) 234, 1498
BsuI GTATCC 1 cut(s) 563
BsuRI GGCC 4 cut(s) 160, 726, 931, 1333
BtgI CCRYGG 2 cut(s) 191, 932
BtgZI GCGATG 1 cut(s) 1434
BtsCI GGATG 4 cut(s) 415, 703, 1122, 1347
BtsIMutI CAGTG 4 cut(s) 191, 385, 982, 1522
BveI ACCTGC 2 cut(s) 818, 950
Cac8I GCNNGC 7 cut(s) 118, 205, 388, 606, 771, 1218, 1573
CfoI GCGC 1 cut(s) 1577
Cfr13I GGNCC 5 cut(s) 725, 779, 929, 1027, 1331
CseI GACGC 1 cut(s) 803
Csp6I GTAC 3 cut(s) 553, 691, 1021
CspCI CAANNNNNGTGG 4 cut(s) 1180, 1215, 1476, 1511
CviAII CATG 8 cut(s) 192, 336, 547, 933, 1039, 1273, 1352, 1562
CviQI GTAC 3 cut(s) 553, 691, 1021
DdeI CTNAG 3 cut(s) 23, 888, 1578
DpnI GATC 8 cut(s) 236, 300, 543, 642, 837, 903, 1268, 1500
DpnII GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
DrdI GACNNNNNNGTC 1 cut(s) 1301
DriI GACNNNNNGTC 1 cut(s) 785
DseDI GACNNNNNNGTC 1 cut(s) 1301
EaeI YGGCCR 1 cut(s) 158
Eam1104I CTCTTC 2 cut(s) 1107, 1374
Eam1105I GACNNNNNGTC 1 cut(s) 785
EarI CTCTTC 2 cut(s) 1107, 1374
Ecl136II GAGCTC 1 cut(s) 415
Eco130I CCWWGG 4 cut(s) 191, 472, 932, 1198
Eco24I GRGCYC 1 cut(s) 417
Eco47I GGWCC 2 cut(s) 779, 1027
Eco53kI GAGCTC 1 cut(s) 415
EcoICRI GAGCTC 1 cut(s) 415
EcoO109I RGGNCCY 1 cut(s) 779
EcoT14I CCWWGG 4 cut(s) 191, 472, 932, 1198
EcoT38I GRGCYC 1 cut(s) 417
ErhI CCWWGG 4 cut(s) 191, 472, 932, 1198
FaeI CATG 8 cut(s) 195, 339, 550, 936, 1042, 1276, 1355, 1565
FatI CATG 8 cut(s) 191, 335, 546, 932, 1038, 1272, 1351, 1561
FauI CCCGC 1 cut(s) 534
FauNDI CATATG 2 cut(s) 137, 586
FbaI TGATCA 2 cut(s) 640, 1266
FblI GTMKAC 1 cut(s) 792
Fnu4HI GCNGC 3 cut(s) 624, 1430, 1524
FokI GGATG 4 cut(s) 422, 710, 1109, 1354
FriOI GRGCYC 1 cut(s) 417
Fsp4HI GCNGC 3 cut(s) 624, 1430, 1524
FspBI CTAG 2 cut(s) 605, 1259
GlaI GCGC 1 cut(s) 1576
GluI GCNGC 3 cut(s) 624, 1430, 1524
GsaI CCCAGC 1 cut(s) 731
HaeIII GGCC 4 cut(s) 160, 726, 931, 1333
HapII CCGG 5 cut(s) 397, 609, 695, 783, 1133
HgaI GACGC 1 cut(s) 803
HhaI GCGC 1 cut(s) 1577
Hin1II CATG 8 cut(s) 195, 339, 550, 936, 1042, 1276, 1355, 1565
Hin6I GCGC 1 cut(s) 1575
HinP1I GCGC 1 cut(s) 1575
HindIII AAGCTT 1 cut(s) 942
HinfI GANTC 6 cut(s) 21, 273, 359, 581, 1240, 1529
HpaII CCGG 5 cut(s) 397, 609, 695, 783, 1133
HphI GGTGA 3 cut(s) 316, 527, 800
Hpy166II GTNNAC 3 cut(s) 555, 793, 1066
Hpy188I TCNGA 8 cut(s) 20, 26, 278, 880, 891, 940, 1245, 1468
Hpy188III TCNNGA 6 cut(s) 149, 218, 238, 539, 1133, 1264
Hpy8I GTNNAC 3 cut(s) 555, 793, 1066
Hpy99I CGWCG 1 cut(s) 1298
HpyAV CCTTC 3 cut(s) 335, 1240, 1394
HpyCH4III ACNGT 1 cut(s) 977
HpyCH4IV ACGT 1 cut(s) 1296
HpyF10VI GCNNNNNNNGC 2 cut(s) 254, 965
HpyF3I CTNAG 3 cut(s) 23, 888, 1578
HpySE526I ACGT 1 cut(s) 1296
Hsp92II CATG 8 cut(s) 195, 339, 550, 936, 1042, 1276, 1355, 1565
HspAI GCGC 1 cut(s) 1575
Kpn2I TCCGGA 1 cut(s) 1132
Ksp22I TGATCA 2 cut(s) 640, 1266
Kzo9I GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
LguI GCTCTTC 1 cut(s) 1107
LmnI GCTCC 2 cut(s) 965, 1208
Lsp1109I GCAGC 3 cut(s) 610, 1416, 1535
LweI GCATC 4 cut(s) 216, 373, 688, 1168
MaeI CTAG 2 cut(s) 605, 1259
MaeII ACGT 1 cut(s) 1296
MaeIII GTNAC 6 cut(s) 103, 173, 515, 679, 799, 993
MalI GATC 8 cut(s) 236, 300, 543, 642, 837, 903, 1268, 1500
MboI GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
MboII GAAGA 3 cut(s) 202, 1094, 1391
MfeI CAATTG 1 cut(s) 1533
MflI RGATCY 2 cut(s) 234, 1498
MhlI GDGCHC 4 cut(s) 31, 417, 1150, 1185
MlsI TGGCCA 1 cut(s) 160
MluCI AATT 6 cut(s) 130, 307, 686, 1318, 1459, 1533
MluNI TGGCCA 1 cut(s) 160
MlyI GAGTC 2 cut(s) 15, 368
MmeI TCCRAC 5 cut(s) 76, 262, 298, 1302, 1345
MnlI CCTC 8 cut(s) 92, 278, 479, 712, 821, 1082, 1316, 1516
Mox20I TGGCCA 1 cut(s) 160
MroI TCCGGA 1 cut(s) 1132
MscI TGGCCA 1 cut(s) 160
MseI TTAA 4 cut(s) 330, 429, 1107, 1551
MslI CAYNNNNRTG 1 cut(s) 34
Msp20I TGGCCA 1 cut(s) 160
MspA1I CMGCKG 1 cut(s) 1526
MspI CCGG 5 cut(s) 397, 609, 695, 783, 1133
MspR9I CCNGG 3 cut(s) 610, 695, 783
MunI CAATTG 1 cut(s) 1533
Mva1269I GAATGC 1 cut(s) 469
MvnI CGCG 1 cut(s) 797
MwoI GCNNNNNNNGC 2 cut(s) 254, 965
NciI CCSGG 3 cut(s) 610, 695, 783
NcoI CCATGG 2 cut(s) 191, 932
NdeI CATATG 2 cut(s) 137, 586
NdeII GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
NheI GCTAGC 1 cut(s) 604
NlaIII CATG 8 cut(s) 195, 339, 550, 936, 1042, 1276, 1355, 1565
NlaIV GGNNCC 6 cut(s) 524, 781, 1204, 1332, 1485, 1500
NmuCI GTSAC 4 cut(s) 173, 515, 679, 993
NspI RCATGY 1 cut(s) 1276
PaqCI CACCTGC 2 cut(s) 818, 950
PciI ACATGT 1 cut(s) 1272
PciSI GCTCTTC 1 cut(s) 1107
PctI GAATGC 1 cut(s) 469
PfeI GAWTC 4 cut(s) 273, 581, 1240, 1529
PflMI CCANNNNNTGG 1 cut(s) 1403
PkrI GCNGC 3 cut(s) 625, 1431, 1525
PleI GAGTC 2 cut(s) 15, 367
PpsI GAGTC 2 cut(s) 15, 367
PpuMI RGGWCCY 1 cut(s) 779
PscI ACATGT 1 cut(s) 1272
PshAI GACNNNNGTC 1 cut(s) 501
PsiI TTATAA 1 cut(s) 972
Psp124BI GAGCTC 1 cut(s) 417
Psp5II RGGWCCY 1 cut(s) 779
PspFI CCCAGC 1 cut(s) 727
PspN4I GGNNCC 6 cut(s) 524, 781, 1204, 1332, 1485, 1500
PspPI GGNCC 5 cut(s) 725, 779, 929, 1027, 1331
PspPPI RGGWCCY 1 cut(s) 779
PstI CTGCAG 2 cut(s) 771, 1073
PsuI RGATCY 2 cut(s) 234, 1498
PvuII CAGCTG 1 cut(s) 1526
RsaI GTAC 3 cut(s) 554, 692, 1022
RsaNI GTAC 3 cut(s) 553, 691, 1021
RseI CAYNNNNRTG 1 cut(s) 34
SacI GAGCTC 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 1107
SaqAI TTAA 4 cut(s) 330, 429, 1107, 1551
SatI GCNGC 3 cut(s) 624, 1430, 1524
Sau3AI GATC 8 cut(s) 234, 298, 541, 640, 835, 901, 1266, 1498
Sau96I GGNCC 5 cut(s) 725, 779, 929, 1027, 1331
SbfI CCTGCAGG 1 cut(s) 771
SchI GAGTC 2 cut(s) 15, 368
ScrFI CCNGG 3 cut(s) 610, 695, 783
SdaI CCTGCAGG 1 cut(s) 771
SduI GDGCHC 4 cut(s) 31, 417, 1150, 1185
SfaNI GCATC 4 cut(s) 216, 373, 688, 1168
SfcI CTRYAG 4 cut(s) 767, 774, 1051, 1069
SinI GGWCC 2 cut(s) 779, 1027
SmiMI CAYNNNNRTG 1 cut(s) 34
Sse8387I CCTGCAGG 1 cut(s) 771
Sse9I AATT 6 cut(s) 130, 307, 686, 1318, 1459, 1533
SsiI CCGC 2 cut(s) 527, 797
SspMI CTAG 2 cut(s) 605, 1259
SstI GAGCTC 1 cut(s) 417
StyD4I CCNGG 3 cut(s) 608, 693, 781
StyI CCWWGG 4 cut(s) 191, 472, 932, 1198
TaaI ACNGT 1 cut(s) 977
TaiI ACGT 1 cut(s) 1299
TaqI TCGA 3 cut(s) 849, 1162, 1293
TasI AATT 6 cut(s) 130, 307, 686, 1318, 1459, 1533
TatI WGTACW 1 cut(s) 552
TfiI GAWTC 4 cut(s) 273, 581, 1240, 1529
Tru1I TTAA 4 cut(s) 330, 429, 1107, 1551
Tru9I TTAA 4 cut(s) 330, 429, 1107, 1551
TscAI CASTG 4 cut(s) 191, 385, 982, 1522
TseFI GTSAC 4 cut(s) 173, 515, 679, 993
TseI GCWGC 3 cut(s) 623, 1429, 1523
Tsp45I GTSAC 4 cut(s) 173, 515, 679, 993
TspDTI ATGAA 6 cut(s) 51, 124, 573, 771, 1111, 1452
TspGWI ACGGA 2 cut(s) 497, 1354
TspRI CASTG 4 cut(s) 191, 385, 982, 1522
Van91I CCANNNNNTGG 1 cut(s) 1403
VpaK11BI GGWCC 2 cut(s) 779, 1027
XapI RAATTY 1 cut(s) 1459
XceI RCATGY 1 cut(s) 1276
XmiI GTMKAC 1 cut(s) 792
XspI CTAG 2 cut(s) 605, 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.