Prupe.1G374700_v2.0.a1

Belongs to the adaptor complexes medium subunit family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
34011771 .. 34015794
4024 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G374700.1

Sequence Viewer

Length: 1341 bp
ATGATCTCTCAGTTCTTCATTCTATCGCAGAGAGGCGACAGCATCGTCTTCCGCGACTATCGCGGTGAAGTACCGAAGGGAAGCGCGGAGATTTTCTTCCGCAAAGTGAAATTTTGGAAGGACGATGGGGAAGGGGATGCGCCACCTGTCTTTAATGCGGATGGTGTAAACTACTTTCACGTGAAGGATGCTGGGTTGCTATTTGTTGCGACAACAAGAGTGAATGTGTCACCCTCTCTTGTTTTGGAACTTCTGCGAAGGATTGCAAGAGTCGTTAAAGATTACCTTGGGGTTCTTAGTGAAGATGCATTGCGAAAAAACTTTGTGCTTGTGTATGAGTTGCTCGACCAAATTATTGACTTTGGTTATGTGCAGACAACTTCGACTGAGGTTTTGAAGTCATATGTGTTCAATGAGCCTGTTGTGGTTGATTCTTCACAGTTAGGCCCTGCTGGAATATTTATGGCCAAAAGAATGCCAGTGACAACAATTACAAAATCTGTTGTAGCAAATGAGCGTGGGGGAAGGAAAAGAGAGGAAATTTTTGTTGACATAATCGAGAAAATGAGTGTTACATTCAGTTCCAGTGGATATATACTTACTTCTGAGATTGATGGTACCATCCAATTGAAAAGTTATCTTACAGGCAACCCAGAAATTCGACTTGCTCTTAATGAGGAAGTGGGTATTGGAAGAGGTGGAGAATCAATTTATGATTATGGTAGTTCACTTGGATCAGGAGCTGTTATACTGGACGATTGTAATTTCCATGAATCTGTTCATCTTGATAGTTTCGATGTTGACAGAACACTGACATTGGTACCAACAGATGGTGAATTTCCTGTCATGAATTACCGCATCACTCAGGAATTCAAGCCTCCCTTTTGTATTAATGCGCTAATTGAAGAAGCAGGACCATTTAAGGCCGAAGTTACTATTAAAGTGCGTGCTGATTTCCCCTCGAGCATTATTGCAGATAAAATTCTTGTGCAGATTCCGCTGCCAACATATACAACTAGAGTTAGTTTTGAGTTGGAACCTGGAGCAGTTGGAAACACAACTGATTTTACTGAAGCAAACAAGAGAATGGAGTGGGGTTTAAAGAAGATTGTAGGTGGATCTGAACATACTTTACATGCAAAGCTGACATTTTCACAGGAATCACATGGAAATATTACCAAGGAAGCTGGACCTGTGAGCATGACCTTCACAATACCCATGTTTAACGCTTCAAGACTTCAGGTGAAATACTTGCATATAACAAAGAAGTCGAAGAGCTACAATCCATATCGATGGGTGAGATATGTCACACACTCAAATTCCTATGTTGCCCGGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

447

Amino Acids

49.92

Weight (kDa)

6.13

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 44
Acc65I GGTACC 2 cut(s) 617, 820
AccB1I GGYRCC 2 cut(s) 617, 820
AccB7I CCANNNNNTGG 1 cut(s) 830
AccII CGCG 3 cut(s) 54, 63, 86
AciI CCGC 7 cut(s) 52, 63, 86, 100, 158, 856, 998
AclWI GGATC 2 cut(s) 742, 1126
AcoI YGGCCR 1 cut(s) 465
AcsI RAATTY 7 cut(s) 110, 540, 657, 836, 869, 981, 1318
AcuI CTGAAG 2 cut(s) 1092, 1223
AcvI CACGTG 1 cut(s) 181
AfaI GTAC 3 cut(s) 72, 619, 822
AfiI CCNNNNNNNGG 1 cut(s) 830
AgsI TTSAA 6 cut(s) 397, 412, 631, 874, 905, 1233
AjnI CCWGG 1 cut(s) 1039
AjuI GAANNNNNNNTTGG 2 cut(s) 672, 704
AluBI AGCT 4 cut(s) 743, 1144, 1187, 1278
AluI AGCT 4 cut(s) 743, 1144, 1187, 1278
AlwI GGATC 2 cut(s) 742, 1126
AlwNI CAGNNNCTG 1 cut(s) 743
Ama87I CYCGRG 1 cut(s) 961
AoxI GGCC 3 cut(s) 445, 465, 924
ApeKI GCWGC 1 cut(s) 1000
ApoI RAATTY 7 cut(s) 110, 540, 657, 836, 869, 981, 1318
ArsI GACNNNNNNTTYG 2 cut(s) 376, 408
AseI ATTAAT 1 cut(s) 891
Asp700I GAANNNNTTC 1 cut(s) 777
Asp718I GGTACC 2 cut(s) 617, 820
AspLEI GCGC 3 cut(s) 86, 142, 898
AspS9I GGNCC 3 cut(s) 446, 914, 1190
AsuC2I CCSGG 1 cut(s) 1333
AsuHPI GGTGA 5 cut(s) 77, 222, 845, 1255, 1309
AvaI CYCGRG 1 cut(s) 961
AvaII GGWCC 2 cut(s) 914, 1190
BaeI ACNNNNGTAYC 2 cut(s) 804, 837
BalI TGGCCA 1 cut(s) 467
BanI GGYRCC 2 cut(s) 617, 820
BbrPI CACGTG 1 cut(s) 181
BbsI GAAGAC 1 cut(s) 40
BbvI GCAGC 1 cut(s) 987
BccI CCATC 6 cut(s) 119, 155, 608, 629, 824, 1287
BciT130I CCWGG 1 cut(s) 1041
BcnI CCSGG 1 cut(s) 1333
BfaI CTAG 1 cut(s) 1017
BisI GCNGC 1 cut(s) 1001
BlsI GCNGC 1 cut(s) 1002
Bme1390I CCNGG 2 cut(s) 1041, 1333
Bme18I GGWCC 2 cut(s) 914, 1190
BmeT110I CYCGRG 1 cut(s) 961
BmgT120I GGNCC 3 cut(s) 446, 914, 1190
BmiI GGNNCC 3 cut(s) 619, 822, 1038
BmrFI CCNGG 2 cut(s) 1041, 1333
BmsI GCATC 5 cut(s) 51, 127, 178, 295, 867
BpiI GAAGAC 1 cut(s) 40
BpmI CTGGAG 1 cut(s) 1062
BpuMI CCSGG 1 cut(s) 1333
Bsa29I ATCGAT 1 cut(s) 1291
BsaAI YACGTR 1 cut(s) 181
BsaJI CCNNGG 2 cut(s) 286, 1179
Bsc4I CCNNNNNNNGG 1 cut(s) 830
Bse1I ACTGG 3 cut(s) 479, 585, 756
Bse3DI GCAATG 1 cut(s) 308
BseBI CCWGG 1 cut(s) 1041
BseCI ATCGAT 1 cut(s) 1291
BseDI CCNNGG 2 cut(s) 286, 1179
BseGI GGATG 4 cut(s) 142, 166, 193, 621
BseLI CCNNNNNNNGG 1 cut(s) 830
BseMI GCAATG 1 cut(s) 308
BseMII CTCAG 4 cut(s) 23, 378, 597, 878
BseNI ACTGG 3 cut(s) 479, 585, 756
BseXI GCAGC 1 cut(s) 987
BseYI CCCAGC 1 cut(s) 191
BsgI GTGCAG 2 cut(s) 392, 1010
Bsh1236I CGCG 3 cut(s) 54, 63, 86
BshFI GGCC 3 cut(s) 447, 467, 926
BshNI GGYRCC 2 cut(s) 617, 820
BshVI ATCGAT 1 cut(s) 1291
BsiHKCI CYCGRG 1 cut(s) 961
BsiSI CCGG 1 cut(s) 1333
BslI CCNNNNNNNGG 1 cut(s) 830
BsmI GAATGC 1 cut(s) 480
BsnI GGCC 3 cut(s) 447, 467, 926
BsoBI CYCGRG 1 cut(s) 961
Bsp143I GATC 3 cut(s) 3, 734, 1118
BspACI CCGC 7 cut(s) 52, 63, 86, 100, 158, 856, 998
BspANI GGCC 3 cut(s) 447, 467, 926
BspCNI CTCAG 4 cut(s) 22, 379, 598, 877
BspDI ATCGAT 1 cut(s) 1291
BspFNI CGCG 3 cut(s) 54, 63, 86
BspHI TCATGA 1 cut(s) 846
BspLI GGNNCC 3 cut(s) 619, 822, 1038
BspPI GGATC 2 cut(s) 742, 1126
BspQI GCTCTTC 1 cut(s) 1268
BspT107I GGYRCC 2 cut(s) 617, 820
BsrDI GCAATG 1 cut(s) 308
BsrI ACTGG 3 cut(s) 479, 585, 756
BssECI CCNNGG 2 cut(s) 286, 1179
BssMI GATC 3 cut(s) 3, 734, 1118
BssT1I CCWWGG 2 cut(s) 286, 1179
Bst2UI CCWGG 1 cut(s) 1041
Bst4CI ACNGT 1 cut(s) 441
Bst6I CTCTTC 2 cut(s) 688, 1268
BstBAI YACGTR 1 cut(s) 181
BstC8I GCNNGC 1 cut(s) 948
BstDEI CTNAG 5 cut(s) 9, 296, 387, 606, 864
BstF5I GGATG 4 cut(s) 142, 166, 193, 621
BstFNI CGCG 3 cut(s) 54, 63, 86
BstHHI GCGC 3 cut(s) 86, 142, 898
BstKTI GATC 3 cut(s) 6, 737, 1121
BstMBI GATC 3 cut(s) 3, 734, 1118
BstMWI GCNNNNNNNGC 2 cut(s) 60, 997
BstNI CCWGG 1 cut(s) 1041
BstNSI RCATGY 1 cut(s) 1139
BstSCI CCNGG 2 cut(s) 1039, 1331
BstUI CGCG 3 cut(s) 54, 63, 86
BstV1I GCAGC 1 cut(s) 987
BstV2I GAAGAC 1 cut(s) 40
BstX2I RGATCY 1 cut(s) 1118
BstXI CCANNNNNNTGG 1 cut(s) 1293
BstYI RGATCY 1 cut(s) 1118
Bsu15I ATCGAT 1 cut(s) 1291
BsuRI GGCC 3 cut(s) 447, 467, 926
BsuTUI ATCGAT 1 cut(s) 1291
BtsCI GGATG 4 cut(s) 142, 166, 193, 621
BtsIMutI CAGTG 3 cut(s) 486, 592, 809
Cac8I GCNNGC 1 cut(s) 948
CaiI CAGNNNCTG 1 cut(s) 743
CciI TCATGA 1 cut(s) 846
CfoI GCGC 3 cut(s) 86, 142, 898
Cfr13I GGNCC 3 cut(s) 446, 914, 1190
ClaI ATCGAT 1 cut(s) 1291
Csp6I GTAC 3 cut(s) 71, 618, 821
CviAII CATG 6 cut(s) 770, 847, 1136, 1166, 1201, 1219
CviJI RGCY 9 cut(s) 418, 447, 467, 743, 877, 926, 1144, 1187, 1278
CviKI_1 RGCY 9 cut(s) 418, 447, 467, 743, 877, 926, 1144, 1187, 1278
CviQI GTAC 3 cut(s) 71, 618, 821
DdeI CTNAG 5 cut(s) 9, 296, 387, 606, 864
DpnI GATC 3 cut(s) 5, 736, 1120
DpnII GATC 3 cut(s) 3, 734, 1118
DraI TTTAAA 1 cut(s) 1101
DrdI GACNNNNNNGTC 1 cut(s) 44
DseDI GACNNNNNNGTC 1 cut(s) 44
EaeI YGGCCR 1 cut(s) 465
Eam1104I CTCTTC 2 cut(s) 688, 1268
EarI CTCTTC 2 cut(s) 688, 1268
Eco130I CCWWGG 2 cut(s) 286, 1179
Eco47I GGWCC 2 cut(s) 914, 1190
Eco57I CTGAAG 2 cut(s) 1092, 1223
Eco72I CACGTG 1 cut(s) 181
Eco88I CYCGRG 1 cut(s) 961
EcoO109I RGGNCCY 1 cut(s) 446
EcoRI GAATTC 1 cut(s) 869
EcoRII CCWGG 1 cut(s) 1039
EcoT14I CCWWGG 2 cut(s) 286, 1179
EcoT22I ATGCAT 1 cut(s) 310
ErhI CCWWGG 2 cut(s) 286, 1179
FaeI CATG 6 cut(s) 773, 850, 1139, 1169, 1204, 1222
FalI AAGNNNNNCTT 4 cut(s) 270, 302, 866, 898
FatI CATG 6 cut(s) 769, 846, 1135, 1165, 1200, 1218
FauNDI CATATG 1 cut(s) 403
Fnu4HI GCNGC 1 cut(s) 1001
FokI GGATG 4 cut(s) 149, 173, 200, 608
Fsp4HI GCNGC 1 cut(s) 1001
FspBI CTAG 1 cut(s) 1017
GlaI GCGC 3 cut(s) 85, 141, 897
GluI GCNGC 1 cut(s) 1001
GsaI CCCAGC 1 cut(s) 195
GsuI CTGGAG 1 cut(s) 1062
HaeIII GGCC 3 cut(s) 447, 467, 926
HapII CCGG 1 cut(s) 1333
HhaI GCGC 3 cut(s) 86, 142, 898
Hin1II CATG 6 cut(s) 773, 850, 1139, 1169, 1204, 1222
Hin6I GCGC 3 cut(s) 84, 140, 896
HinP1I GCGC 3 cut(s) 84, 140, 896
HincII GTYRAC 2 cut(s) 550, 802
HindII GTYRAC 2 cut(s) 550, 802
HinfI GANTC 6 cut(s) 270, 431, 704, 773, 994, 1160
HpaII CCGG 1 cut(s) 1333
HphI GGTGA 5 cut(s) 77, 222, 845, 1255, 1309
Hpy166II GTNNAC 4 cut(s) 169, 550, 728, 802
Hpy188I TCNGA 2 cut(s) 607, 1123
Hpy188III TCNNGA 6 cut(s) 559, 738, 785, 847, 866, 1233
Hpy8I GTNNAC 4 cut(s) 169, 550, 728, 802
HpyAV CCTTC 7 cut(s) 70, 112, 125, 178, 252, 519, 1216
HpyCH4III ACNGT 1 cut(s) 441
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 7 cut(s) 266, 308, 373, 974, 991, 1139, 1255
HpyF10VI GCNNNNNNNGC 2 cut(s) 60, 997
HpyF3I CTNAG 5 cut(s) 9, 296, 387, 606, 864
HpySE526I ACGT 1 cut(s) 180
Hsp92II CATG 6 cut(s) 773, 850, 1139, 1169, 1204, 1222
HspAI GCGC 3 cut(s) 84, 140, 896
KpnI GGTACC 2 cut(s) 621, 824
Kzo9I GATC 3 cut(s) 3, 734, 1118
LguI GCTCTTC 1 cut(s) 1268
LmnI GCTCC 2 cut(s) 740, 1043
Lsp1109I GCAGC 1 cut(s) 987
LweI GCATC 5 cut(s) 51, 127, 178, 295, 867
MaeI CTAG 1 cut(s) 1017
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 5 cut(s) 228, 481, 571, 931, 1306
MalI GATC 3 cut(s) 5, 736, 1120
MboI GATC 3 cut(s) 3, 734, 1118
MboII GAAGA 9 cut(s) 7, 40, 88, 314, 426, 705, 917, 1117, 1285
MfeI CAATTG 1 cut(s) 626
MflI RGATCY 1 cut(s) 1118
MlsI TGGCCA 1 cut(s) 467
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 1 cut(s) 279
MmeI TCCRAC 2 cut(s) 1014, 1030
MnlI CCTC 8 cut(s) 26, 244, 382, 529, 670, 689, 888, 970
Mox20I TGGCCA 1 cut(s) 467
Mph1103I ATGCAT 1 cut(s) 310
MroXI GAANNNNTTC 1 cut(s) 777
MscI TGGCCA 1 cut(s) 467
MseI TTAA 8 cut(s) 153, 276, 672, 891, 921, 939, 1100, 1224
MslI CAYNNNNRTG 1 cut(s) 1291
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 1 cut(s) 1000
MspI CCGG 1 cut(s) 1333
MspR9I CCNGG 2 cut(s) 1041, 1333
MunI CAATTG 1 cut(s) 626
Mva1269I GAATGC 1 cut(s) 480
MvaI CCWGG 1 cut(s) 1041
MvnI CGCG 3 cut(s) 54, 63, 86
MwoI GCNNNNNNNGC 2 cut(s) 60, 997
NciI CCSGG 1 cut(s) 1333
NdeI CATATG 1 cut(s) 403
NdeII GATC 3 cut(s) 3, 734, 1118
NlaIII CATG 6 cut(s) 773, 850, 1139, 1169, 1204, 1222
NlaIV GGNNCC 3 cut(s) 619, 822, 1038
NmuCI GTSAC 3 cut(s) 228, 481, 1306
NsiI ATGCAT 1 cut(s) 310
NspI RCATGY 1 cut(s) 1139
PaeR7I CTCGAG 1 cut(s) 961
PagI TCATGA 1 cut(s) 846
PciSI GCTCTTC 1 cut(s) 1268
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PctI GAATGC 1 cut(s) 480
PdmI GAANNNNTTC 1 cut(s) 777
PfeI GAWTC 5 cut(s) 431, 704, 773, 994, 1160
PflMI CCANNNNNTGG 1 cut(s) 830
PkrI GCNGC 1 cut(s) 1002
PleI GAGTC 1 cut(s) 278
PmaCI CACGTG 1 cut(s) 181
PmlI CACGTG 1 cut(s) 181
PpsI GAGTC 1 cut(s) 278
Ppu21I YACGTR 1 cut(s) 181
PshBI ATTAAT 1 cut(s) 891
Psp6I CCWGG 1 cut(s) 1039
PspCI CACGTG 1 cut(s) 181
PspFI CCCAGC 1 cut(s) 191
PspGI CCWGG 1 cut(s) 1039
PspN4I GGNNCC 3 cut(s) 619, 822, 1038
PspPI GGNCC 3 cut(s) 446, 914, 1190
PspXI VCTCGAGB 1 cut(s) 961
PsrI GAACNNNNNNTAC 2 cut(s) 1116, 1148
PstNI CAGNNNCTG 1 cut(s) 743
PsuI RGATCY 1 cut(s) 1118
RsaI GTAC 3 cut(s) 72, 619, 822
RsaNI GTAC 3 cut(s) 71, 618, 821
RseI CAYNNNNRTG 1 cut(s) 1291
SapI GCTCTTC 1 cut(s) 1268
SaqAI TTAA 8 cut(s) 153, 276, 672, 891, 921, 939, 1100, 1224
SatI GCNGC 1 cut(s) 1001
Sau3AI GATC 3 cut(s) 3, 734, 1118
Sau96I GGNCC 3 cut(s) 446, 914, 1190
SchI GAGTC 1 cut(s) 279
ScrFI CCNGG 2 cut(s) 1041, 1333
SfaNI GCATC 5 cut(s) 51, 127, 178, 295, 867
Sfr274I CTCGAG 1 cut(s) 961
SinI GGWCC 2 cut(s) 914, 1190
SlaI CTCGAG 1 cut(s) 961
SmiMI CAYNNNNRTG 1 cut(s) 1291
SmlI CTYRAG 1 cut(s) 961
SmoI CTYRAG 1 cut(s) 961
SsiI CCGC 7 cut(s) 52, 63, 86, 100, 158, 856, 998
SspI AATATT 2 cut(s) 459, 1174
SspMI CTAG 1 cut(s) 1017
StyD4I CCNGG 2 cut(s) 1039, 1331
StyI CCWWGG 2 cut(s) 286, 1179
TaaI ACNGT 1 cut(s) 441
TaiI ACGT 1 cut(s) 183
TaqI TCGA 8 cut(s) 345, 383, 558, 661, 795, 962, 1271, 1291
TfiI GAWTC 5 cut(s) 431, 704, 773, 994, 1160
Tru1I TTAA 8 cut(s) 153, 276, 672, 891, 921, 939, 1100, 1224
Tru9I TTAA 8 cut(s) 153, 276, 672, 891, 921, 939, 1100, 1224
TscAI CASTG 3 cut(s) 486, 592, 816
TseFI GTSAC 3 cut(s) 228, 481, 1306
TseI GCWGC 1 cut(s) 1000
Tsp45I GTSAC 3 cut(s) 228, 481, 1306
TspDTI ATGAA 4 cut(s) 7, 770, 786, 863
TspRI CASTG 3 cut(s) 486, 592, 816
Van91I CCANNNNNTGG 1 cut(s) 830
VpaK11BI GGWCC 2 cut(s) 914, 1190
VspI ATTAAT 1 cut(s) 891
XapI RAATTY 7 cut(s) 110, 540, 657, 836, 869, 981, 1318
XceI RCATGY 1 cut(s) 1139
XhoI CTCGAG 1 cut(s) 961
XmnI GAANNNNTTC 1 cut(s) 777
XspI CTAG 1 cut(s) 1017
Zsp2I ATGCAT 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.