Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002082

Physical Location & Seq

Genomic Coordinates Forward (+)

45837632 .. 45841275

Gene Structure 3644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0307500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGAGTTCCTCAGAGACCAAAGAAGGTTCAGATCTGGCTCTGAAATTCAAATCGAAGAAACCCTTAACCCAAACGAAGCCCCAATCGGTGGAGAAAGACCCGATTTTGACCGCGCCGACGCCGGAGAAGACCCTGCAGCCGGCGCCGCCGCGAGCCCGGAACCGGAACTTCGCGCTGTCCATCGGAGAAATCAGGAGAGCCGCGGCGAAAAGCGTCGGCGAGAAGAAGGAGCAGATCGGATCTGCCAGACGGCAAATCGCGTGGCCGGAGGAGAATCCGAAGAAGGCCCGTGCCGGCGCACGGAAAAAGCTACCGGAGAAGTTTGAAATGTTGGGTGAGTTTTTCAATTGCTTGGATAGTTCGATTCGGTTGTTGAGGTCTAAGGGATTGAAGACGAGCTTCAGGAACATCTGCCCTGCGGTTGAGGATTTGACTGATAGGAGGTTTACATATAGTCACTTGGCTCAGATGAAGTTTATTTTGCCTGAGGTGATTGAGATAAAGAAAGTGCTTGTGTTGGATGAGCGAACCAGTTGTTTGAAACCGGATCTTCATGTTGCCTTGAATGTTCAAGCATTAGAGAACGATGGCAAGTCGAAATCTGAAGGTGGGGGGATTGTGCAGTTGAAGACGACACTGAATTTGAGAAGGGTGTTCCGTGATCGGCTTGTGGAGGTTTCAAGATCTTATCCTGAGGATTATGAAATTCCAGAAGAAACTCTGCCCCATCCATTCAACTGTGGCAAGCAAGATATACATTCAAATAGGGTCAAGTTTTCCTCCTCATCCTCTCCTGGGGAGGAGGTGTCAACCAGTGTAGACACAGTTGAGCAACCAGCAGTTTTTAAGACCTGCCTTCAGGGTGATGAAATTCCAGATGAAACACATCAAACGCCATCTAATCAATCAATGGAGGATTTGAATTTTAACATAATCAGAACCCCCAGTGTTCCATTGCCTATTAAGACATCATTTGAAGCACCTAAAAATCAGCAACCAGAAATAGCATCTCATCTTTCGCTATCTTTTCGAAGGCACTTTTCTCAGAAAGCTAAACACAGTGAGTCAGAGAACATACAGGATGATCCACCGAAGGCATCTCTCCGAGCTTCAAATCTTTCAGTTTCAGAGTCAAATCTCAATACAGTTTGCTCCATTAAGGAAGATAGTATTGCTGCTTCTTCCCATGGTCAAGTGCCTGCAACCCCAACCAAAAAGATAGACCCTGTAGAGGATGATGGTTTGCCTGGAAATAATACTGCCATCCAGTCTGCTCCAGGAAAGCTTGCTTCAACTCCAGCAAAGCTTGTTTCCACTCCAGCAAAGTTGATGTCCATCACACCTGCACCGCACGCACCAAAGCGATGTTTTATGAGCCCAGAGGATAGCTCACCGAACAAGTTGGTCAGGCGTCCTCCACGCACCAGGTCGTTGAAATTTGACACTCCTGTGAAGAGTAGAAATGCAGATGAAGTTCTTGATACGGATGACGCATCAATGGATAAAGACATTCTTGATATTCTTCCTAGGGATCTTTTGCAATCGCTTAGAGATAAGGAGAGGAAGGCAACAGAGGAGAGAAATCCAGCCATCTCACAAGCTAAGAGGCGGCAGAAAATGATTGCCAACCTGCCTAAACTCTTTAACATGATTCATTTCCTAGTTCAGTCAATGAACCGTTCTTTTATCACCAAACAGGAGCTTGTACACAAGATAATTTGGAACCATTGTGACATGATTGACAGAAAGGATGTTGAAGAGCAACTGAATTTACTGCTAGAATTGGTTCCAGACTGGATCTCTGAAAAGAAACTTGGAGGAGATTTGCTTTTCTACATTAATAAAAGATCATGTCCTGAGGCAATACGTTCCCGTCTTGAAGAAGCAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006605 GO:0006810 GO:0006886 GO:0006892 GO:0006895 GO:0006896 GO:0007034 GO:0007041 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016482 GO:0030117 GO:0030119 GO:0030124 GO:0031410 GO:0031982 GO:0031984 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0048475 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072657 GO:0090160 GO:0097708 GO:0098791 GO:0098796 GO:1903361 GO:1990778

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adap_comp_sub Clat_adaptor_s

Protein Analysis

630

Amino Acids

70.7

Weight (kDa)

9.01

Isoelectric Point (pI)

66.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CDT1	PF08839	104 - 226	4.1e-13	DNA replication factor CDT1 like
CDT1_C	PF16679	511 - 605	9.4e-23	DNA replication factor Cdt1 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24550 AT4G24550 AT4G24550
fragaria_vesca	FvH4_2g39370 FvH4_2g39370 FvH4_5g35480 FvH4_5g35480 FvH4_5g35480
malus_domestica	MD08G1026000.v1.1 MD08G1196400.v1.1 MD15G1022700.v1.1 MD15G1384200.v1.1
prunus_persica	Prupe.1G374700_v2.0.a1 Prupe.1G374700_v2.0.a1 Prupe.1G530400_v2.0.a1 Prupe.1G530400_v2.0.a1
pyrus_communis	pycom08g02000 pycom08g16880 pycom15g01900 pycom15g34390
rosa_chinensis	RchiOBHm_Chr6g0301631 RchiOBHm_Chr7g0236861
rosa_laevigata	RLG00000001055 RLG00000011237
rosa_multiflora	Rmu_sc0002867.1_g000012 Rmu_sc0040036.1_g000001 Rmu_ssc0000452.1_g000016
rosa_roxburghii	Rroxscaffold_2G00122930 Rroxscaffold_2G00122940 Rroxscaffold_3G00224750 Rroxscaffold_7G00166580
rosa_rugosa	Rorug06G0307500 Rorug07G0300200 Rorug07G0300200
rosa_samantha	Rh6AG420300 Rh6BG426500 Rh6CG433300 Rh6DG419800 Rh7AG455200 Rh7BG426400 Rh7CG473900 Rh7DG443200
rosa_wichuraiana	Rw6G036340 Rw7G037790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1351
Acc36I	ACCTGC	3 cut(s)	860, 1351, 1638
AccB1I	GGYRCC	1 cut(s)	142
AccB7I	CCANNNNNTGG	1 cut(s)	88
AccI	GTMKAC	1 cut(s)	819
AccII	CGCG	5 cut(s)	113, 151, 173, 203, 260
AciI	CCGC	8 cut(s)	111, 146, 149, 201, 203, 419, 1349, 1609
AclWI	GGATC	5 cut(s)	247, 555, 1079, 1539, 1805
AcoI	YGGCCR	1 cut(s)	263
AcsI	RAATTY	7 cut(s)	44, 640, 705, 870, 922, 1436, 1768
AcuI	CTGAAG	3 cut(s)	385, 624, 842
AcyI	GRCGYC	3 cut(s)	119, 143, 1411
AfaI	GTAC	1 cut(s)	1707
AfiI	CCNNNNNNNGG	6 cut(s)	88, 139, 162, 300, 795, 1231
AjnI	CCWGG	4 cut(s)	793, 1246, 1276, 1424
AjuI	GAANNNNNNNTTGG	2 cut(s)	1797, 1829
AleI	CACNNNNGTG	1 cut(s)	1448
AluBI	AGCT	9 cut(s)	310, 399, 1052, 1109, 1285, 1306, 1389, 1601, 1702
AluI	AGCT	9 cut(s)	310, 399, 1052, 1109, 1285, 1306, 1389, 1601, 1702
Alw26I	GTCTC	1 cut(s)	8
AlwI	GGATC	5 cut(s)	247, 555, 1079, 1539, 1805
AoxI	GGCC	2 cut(s)	263, 285
ApeKI	GCWGC	2 cut(s)	136, 1175
ApoI	RAATTY	7 cut(s)	44, 640, 705, 870, 922, 1436, 1768
ArsI	GACNNNNNNTTYG	4 cut(s)	625, 657, 1316, 1348
AseI	ATTAAT	1 cut(s)	1839
Asp700I	GAANNNNTTC	1 cut(s)	1785
AspA2I	CCTAGG	1 cut(s)	1526
AspLEI	GCGC	4 cut(s)	115, 145, 175, 299
AspS9I	GGNCC	1 cut(s)	286
AsuC2I	CCSGG	1 cut(s)	157
AsuHPI	GGTGA	5 cut(s)	347, 502, 875, 1383, 1681
AsuII	TTCGAA	1 cut(s)	1030
AvrII	CCTAGG	1 cut(s)	1526
AxyI	CCTNAGG	3 cut(s)	486, 693, 1857
BanI	GGYRCC	1 cut(s)	142
BanII	GRGCYC	2 cut(s)	157, 1379
BarI	GAAGNNNNNNTAC	2 cut(s)	1162, 1194
BbsI	GAAGAC	3 cut(s)	134, 398, 635
BbvI	GCAGC	2 cut(s)	148, 1162
BccI	CCATC	8 cut(s)	188, 581, 735, 904, 1232, 1271, 1343, 1598
BceAI	ACGGC	1 cut(s)	266
BciT130I	CCWGG	4 cut(s)	795, 1248, 1278, 1426
BcnI	CCSGG	1 cut(s)	157
BcoDI	GTCTC	1 cut(s)	8
BfaI	CTAG	3 cut(s)	1527, 1661, 1778
BfmI	CTRYAG	2 cut(s)	134, 1227
BfoI	RGCGCY	1 cut(s)	146
BfuAI	ACCTGC	3 cut(s)	860, 1351, 1638
BglII	AGATCT	2 cut(s)	31, 683
BisI	GCNGC	7 cut(s)	137, 146, 149, 201, 204, 1176, 1610
BlnI	CCTAGG	1 cut(s)	1526
BlsI	GCNGC	7 cut(s)	138, 147, 150, 202, 205, 1177, 1611
Bme1390I	CCNGG	5 cut(s)	157, 795, 1248, 1278, 1426
BmgT120I	GGNCC	1 cut(s)	286
BmiI	GGNNCC	4 cut(s)	144, 161, 1724, 1788
BmrFI	CCNGG	5 cut(s)	157, 795, 1248, 1278, 1426
BmrI	ACTGGG	1 cut(s)	939
BmsI	GCATC	3 cut(s)	1016, 1106, 1502
BmuI	ACTGGG	1 cut(s)	939
BpiI	GAAGAC	3 cut(s)	134, 398, 635
BplI	GAGNNNNNCTC	2 cut(s)	1373, 1405
BpmI	CTGGAG	3 cut(s)	1260, 1281, 1302
Bpu14I	TTCGAA	1 cut(s)	1030
BpuMI	CCSGG	1 cut(s)	157
BsaBI	GATNNNNATC	1 cut(s)	1334
BsaHI	GRCGYC	3 cut(s)	119, 143, 1411
BsaI	GGTCTC	1 cut(s)	8
BsaJI	CCNNGG	4 cut(s)	201, 794, 1186, 1526
BsaWI	WCCGGW	3 cut(s)	162, 313, 544
BsaXI	ACNNNNNCTCC	2 cut(s)	791, 821
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 139, 162, 300, 795, 1231
Bse118I	RCCGGY	2 cut(s)	139, 293
Bse1I	ACTGG	5 cut(s)	531, 813, 945, 1267, 1799
Bse21I	CCTNAGG	3 cut(s)	486, 693, 1857
Bse3DI	GCAATG	1 cut(s)	953
Bse8I	GATNNNNATC	1 cut(s)	1334
BseBI	CCWGG	4 cut(s)	795, 1248, 1278, 1426
BseDI	CCNNGG	4 cut(s)	201, 794, 1186, 1526
BseGI	GGATG	8 cut(s)	526, 727, 785, 1087, 1240, 1263, 1492, 1756
BseJI	GATNNNNATC	1 cut(s)	1334
BseLI	CCNNNNNNNGG	6 cut(s)	88, 139, 162, 300, 795, 1231
BseMI	GCAATG	1 cut(s)	953
BseMII	CTCAG	6 cut(s)	24, 477, 479, 684, 1058, 1848
BseNI	ACTGG	5 cut(s)	531, 813, 945, 1267, 1799
BseRI	GAGGAG	5 cut(s)	284, 772, 815, 1589, 1833
BseXI	GCAGC	2 cut(s)	148, 1162
BsgI	GTGCAG	2 cut(s)	641, 1329
Bsh1236I	CGCG	5 cut(s)	113, 151, 173, 203, 260
BshFI	GGCC	2 cut(s)	265, 287
BshNI	GGYRCC	1 cut(s)	142
BsiSI	CCGG	8 cut(s)	122, 140, 157, 163, 266, 294, 314, 545
BslI	CCNNNNNNNGG	6 cut(s)	88, 139, 162, 300, 795, 1231
BsmAI	GTCTC	1 cut(s)	8
BsnI	GGCC	2 cut(s)	265, 287
Bso31I	GGTCTC	1 cut(s)	8
Bsp119I	TTCGAA	1 cut(s)	1030
Bsp1286I	GDGCHC	2 cut(s)	157, 1379
Bsp1407I	TGTACA	1 cut(s)	1705
Bsp19I	CCATGG	1 cut(s)	1186
BspACI	CCGC	8 cut(s)	111, 146, 149, 201, 203, 419, 1349, 1609
BspANI	GGCC	2 cut(s)	265, 287
BspCNI	CTCAG	6 cut(s)	23, 478, 478, 685, 1057, 1849
BspFNI	CGCG	5 cut(s)	113, 151, 173, 203, 260
BspLI	GGNNCC	4 cut(s)	144, 161, 1724, 1788
BspMAI	CTGCAG	1 cut(s)	138
BspMI	ACCTGC	3 cut(s)	860, 1351, 1638
BspPI	GGATC	5 cut(s)	247, 555, 1079, 1539, 1805
BspQI	GCTCTTC	1 cut(s)	1752
BspT104I	TTCGAA	1 cut(s)	1030
BspT107I	GGYRCC	1 cut(s)	142
BspTNI	GGTCTC	1 cut(s)	8
BsrDI	GCAATG	1 cut(s)	953
BsrFI	RCCGGY	2 cut(s)	139, 293
BsrGI	TGTACA	1 cut(s)	1705
BsrI	ACTGG	5 cut(s)	531, 813, 945, 1267, 1799
BssAI	RCCGGY	2 cut(s)	139, 293
BssECI	CCNNGG	4 cut(s)	201, 794, 1186, 1526
BssNI	GRCGYC	3 cut(s)	119, 143, 1411
BssT1I	CCWWGG	2 cut(s)	1186, 1526
Bst2UI	CCWGG	4 cut(s)	795, 1248, 1278, 1426
Bst4CI	ACNGT	5 cut(s)	740, 826, 1061, 1147, 1679
Bst6I	CTCTTC	2 cut(s)	1448, 1752
BstACI	GRCGYC	3 cut(s)	119, 143, 1411
BstAUI	TGTACA	1 cut(s)	1705
BstBI	TTCGAA	1 cut(s)	1030
BstC8I	GCNNGC	7 cut(s)	141, 153, 295, 746, 1200, 1287, 1353
BstDEI	CTNAG	9 cut(s)	10, 381, 465, 486, 693, 1044, 1547, 1602, 1857
BstDSI	CCRYGG	2 cut(s)	201, 1186
BstF5I	GGATG	8 cut(s)	526, 727, 785, 1087, 1240, 1263, 1492, 1756
BstFNI	CGCG	5 cut(s)	113, 151, 173, 203, 260
BstH2I	RGCGCY	1 cut(s)	146
BstHHI	GCGC	4 cut(s)	115, 145, 175, 299
BstMAI	GTCTC	1 cut(s)	8
BstMWI	GCNNNNNNNGC	3 cut(s)	142, 145, 1352
BstNI	CCWGG	4 cut(s)	795, 1248, 1278, 1426
BstSCI	CCNGG	5 cut(s)	155, 793, 1246, 1276, 1424
BstSFI	CTRYAG	2 cut(s)	134, 1227
BstUI	CGCG	5 cut(s)	113, 151, 173, 203, 260
BstV1I	GCAGC	2 cut(s)	148, 1162
BstV2I	GAAGAC	3 cut(s)	134, 398, 635
BstX2I	RGATCY	6 cut(s)	31, 239, 547, 683, 1531, 1797
BstYI	RGATCY	6 cut(s)	31, 239, 547, 683, 1531, 1797
Bsu36I	CCTNAGG	3 cut(s)	486, 693, 1857
BsuRI	GGCC	2 cut(s)	265, 287
BtgI	CCRYGG	2 cut(s)	201, 1186
BtgZI	GCGATG	1 cut(s)	1378
BtsCI	GGATG	8 cut(s)	526, 727, 785, 1087, 1240, 1263, 1492, 1756
BtsIMutI	CAGTG	4 cut(s)	635, 820, 952, 1066
BveI	ACCTGC	3 cut(s)	860, 1351, 1638
Cac8I	GCNNGC	7 cut(s)	141, 153, 295, 746, 1200, 1287, 1353
CfoI	GCGC	4 cut(s)	115, 145, 175, 299
Cfr10I	RCCGGY	2 cut(s)	139, 293
Cfr13I	GGNCC	1 cut(s)	286
Cfr42I	CCGCGG	1 cut(s)	204
CseI	GACGC	4 cut(s)	127, 202, 1400, 1499
CsiI	ACCWGGT	1 cut(s)	1424
Csp6I	GTAC	1 cut(s)	1706
CspCI	CAANNNNNGTGG	2 cut(s)	242, 277
CviAII	CATG	5 cut(s)	554, 1187, 1648, 1735, 1851
CviQI	GTAC	1 cut(s)	1706
DdeI	CTNAG	9 cut(s)	10, 381, 465, 486, 693, 1044, 1547, 1602, 1857
DinI	GGCGCC	1 cut(s)	144
EaeI	YGGCCR	1 cut(s)	263
Eam1104I	CTCTTC	2 cut(s)	1448, 1752
EarI	CTCTTC	2 cut(s)	1448, 1752
Eco130I	CCWWGG	2 cut(s)	1186, 1526
Eco24I	GRGCYC	2 cut(s)	157, 1379
Eco31I	GGTCTC	1 cut(s)	8
Eco57I	CTGAAG	3 cut(s)	385, 624, 842
Eco81I	CCTNAGG	3 cut(s)	486, 693, 1857
EcoRII	CCWGG	4 cut(s)	793, 1246, 1276, 1424
EcoT14I	CCWWGG	2 cut(s)	1186, 1526
EcoT38I	GRGCYC	2 cut(s)	157, 1379
EgeI	GGCGCC	1 cut(s)	144
EheI	GGCGCC	1 cut(s)	144
ErhI	CCWWGG	2 cut(s)	1186, 1526
FaeI	CATG	5 cut(s)	557, 1190, 1651, 1738, 1854
FalI	AAGNNNNNCTT	6 cut(s)	47, 79, 383, 415, 1497, 1529
FatI	CATG	5 cut(s)	553, 1186, 1647, 1734, 1850
FblI	GTMKAC	1 cut(s)	819
Fnu4HI	GCNGC	7 cut(s)	137, 146, 149, 201, 204, 1176, 1610
FokI	GGATG	8 cut(s)	533, 714, 772, 1094, 1247, 1250, 1499, 1763
FriOI	GRGCYC	2 cut(s)	157, 1379
Fsp4HI	GCNGC	7 cut(s)	137, 146, 149, 201, 204, 1176, 1610
FspBI	CTAG	3 cut(s)	1527, 1661, 1778
GlaI	GCGC	4 cut(s)	114, 144, 174, 298
GluI	GCNGC	7 cut(s)	137, 146, 149, 201, 204, 1176, 1610
GsuI	CTGGAG	3 cut(s)	1260, 1281, 1302
HaeII	RGCGCY	1 cut(s)	146
HaeIII	GGCC	2 cut(s)	265, 287
HapII	CCGG	8 cut(s)	122, 140, 157, 163, 266, 294, 314, 545
HgaI	GACGC	4 cut(s)	127, 202, 1400, 1499
HhaI	GCGC	4 cut(s)	115, 145, 175, 299
Hin1I	GRCGYC	3 cut(s)	119, 143, 1411
Hin1II	CATG	5 cut(s)	557, 1190, 1651, 1738, 1854
Hin6I	GCGC	4 cut(s)	113, 143, 173, 297
HinP1I	GCGC	4 cut(s)	113, 143, 173, 297
HincII	GTYRAC	1 cut(s)	810
HindII	GTYRAC	1 cut(s)	810
HindIII	AAGCTT	2 cut(s)	1283, 1304
HinfI	GANTC	5 cut(s)	274, 364, 1064, 1130, 1651
HpaII	CCGG	8 cut(s)	122, 140, 157, 163, 266, 294, 314, 545
HphI	GGTGA	5 cut(s)	347, 502, 875, 1383, 1681
Hpy166II	GTNNAC	4 cut(s)	447, 810, 820, 1708
Hpy8I	GTNNAC	4 cut(s)	447, 810, 820, 1708
Hpy99I	CGWCG	2 cut(s)	121, 218
HpyAV	CCTTC	9 cut(s)	17, 220, 277, 599, 642, 866, 1026, 1087, 1558
HpyCH4III	ACNGT	5 cut(s)	740, 826, 1061, 1147, 1679
HpyCH4IV	ACGT	1 cut(s)	1867
HpyCH4V	TGCA	6 cut(s)	136, 622, 1202, 1346, 1466, 1540
HpyF10VI	GCNNNNNNNGC	3 cut(s)	142, 145, 1352
HpyF3I	CTNAG	9 cut(s)	10, 381, 465, 486, 693, 1044, 1547, 1602, 1857
HpySE526I	ACGT	1 cut(s)	1867
Hsp92I	GRCGYC	3 cut(s)	119, 143, 1411
Hsp92II	CATG	5 cut(s)	557, 1190, 1651, 1738, 1854
HspAI	GCGC	4 cut(s)	113, 143, 173, 297
KasI	GGCGCC	1 cut(s)	142
KroI	GCCGGC	2 cut(s)	139, 293
KroNI	GCCGGC	2 cut(s)	141, 295
KspI	CCGCGG	1 cut(s)	204
LguI	GCTCTTC	1 cut(s)	1752
LmnI	GCTCC	4 cut(s)	229, 1157, 1279, 1699
Lsp1109I	GCAGC	2 cut(s)	148, 1162
LweI	GCATC	3 cut(s)	1016, 1106, 1502
MabI	ACCWGGT	1 cut(s)	1424
MaeI	CTAG	3 cut(s)	1527, 1661, 1778
MaeII	ACGT	1 cut(s)	1867
MaeIII	GTNAC	2 cut(s)	455, 1730
MfeI	CAATTG	1 cut(s)	346
MflI	RGATCY	6 cut(s)	31, 239, 547, 683, 1531, 1797
MhlI	GDGCHC	2 cut(s)	157, 1379
Mly113I	GGCGCC	1 cut(s)	143
MlyI	GAGTC	2 cut(s)	1073, 1139
MmeI	TCCRAC	1 cut(s)	498
MroNI	GCCGGC	2 cut(s)	139, 293
MroXI	GAANNNNTTC	1 cut(s)	1785
MseI	TTAA	7 cut(s)	65, 846, 927, 963, 1158, 1644, 1839
MslI	CAYNNNNRTG	1 cut(s)	1448
MspA1I	CMGCKG	1 cut(s)	203
MspI	CCGG	8 cut(s)	122, 140, 157, 163, 266, 294, 314, 545
MspR9I	CCNGG	5 cut(s)	157, 795, 1248, 1278, 1426
MunI	CAATTG	1 cut(s)	346
MvaI	CCWGG	4 cut(s)	795, 1248, 1278, 1426
MvnI	CGCG	5 cut(s)	113, 151, 173, 203, 260
MwoI	GCNNNNNNNGC	3 cut(s)	142, 145, 1352
NaeI	GCCGGC	2 cut(s)	141, 295
NarI	GGCGCC	1 cut(s)	143
NciI	CCSGG	1 cut(s)	157
NcoI	CCATGG	1 cut(s)	1186
NgoMIV	GCCGGC	2 cut(s)	139, 293
NlaIII	CATG	5 cut(s)	557, 1190, 1651, 1738, 1854
NlaIV	GGNNCC	4 cut(s)	144, 161, 1724, 1788
NmuCI	GTSAC	2 cut(s)	455, 1730
NspV	TTCGAA	1 cut(s)	1030
OliI	CACNNNNGTG	1 cut(s)	1448
PaqCI	CACCTGC	1 cut(s)	1351
PciSI	GCTCTTC	1 cut(s)	1752
PdiI	GCCGGC	2 cut(s)	141, 295
PdmI	GAANNNNTTC	1 cut(s)	1785
PfeI	GAWTC	3 cut(s)	274, 364, 1651
PflMI	CCANNNNNTGG	1 cut(s)	88
PfoI	TCCNGGA	1 cut(s)	1276
PkrI	GCNGC	7 cut(s)	138, 147, 150, 202, 205, 1177, 1611
PleI	GAGTC	2 cut(s)	1072, 1138
PluTI	GGCGCC	1 cut(s)	146
PpsI	GAGTC	2 cut(s)	1072, 1138
PshBI	ATTAAT	1 cut(s)	1839
Psp6I	CCWGG	4 cut(s)	793, 1246, 1276, 1424
PspGI	CCWGG	4 cut(s)	793, 1246, 1276, 1424
PspN4I	GGNNCC	4 cut(s)	144, 161, 1724, 1788
PspPI	GGNCC	1 cut(s)	286
PstI	CTGCAG	1 cut(s)	138
PsuI	RGATCY	6 cut(s)	31, 239, 547, 683, 1531, 1797
RsaI	GTAC	1 cut(s)	1707
RsaNI	GTAC	1 cut(s)	1706
RseI	CAYNNNNRTG	1 cut(s)	1448
SacII	CCGCGG	1 cut(s)	204
SapI	GCTCTTC	1 cut(s)	1752
SaqAI	TTAA	7 cut(s)	65, 846, 927, 963, 1158, 1644, 1839
SatI	GCNGC	7 cut(s)	137, 146, 149, 201, 204, 1176, 1610
Sau96I	GGNCC	1 cut(s)	286
SchI	GAGTC	2 cut(s)	1073, 1139
ScrFI	CCNGG	5 cut(s)	157, 795, 1248, 1278, 1426
SduI	GDGCHC	2 cut(s)	157, 1379
SexAI	ACCWGGT	1 cut(s)	1424
SfaNI	GCATC	3 cut(s)	1016, 1106, 1502
SfcI	CTRYAG	2 cut(s)	134, 1227
SfoI	GGCGCC	1 cut(s)	144
Sfr303I	CCGCGG	1 cut(s)	204
SfuI	TTCGAA	1 cut(s)	1030
SgrBI	CCGCGG	1 cut(s)	204
SmiMI	CAYNNNNRTG	1 cut(s)	1448
SsiI	CCGC	8 cut(s)	111, 146, 149, 201, 203, 419, 1349, 1609
SspDI	GGCGCC	1 cut(s)	142
SspMI	CTAG	3 cut(s)	1527, 1661, 1778
StyD4I	CCNGG	5 cut(s)	155, 793, 1246, 1276, 1424
StyI	CCWWGG	2 cut(s)	1186, 1526
TaaI	ACNGT	5 cut(s)	740, 826, 1061, 1147, 1679
TaiI	ACGT	1 cut(s)	1870
TaqI	TCGA	4 cut(s)	53, 362, 596, 1030
TatI	WGTACW	1 cut(s)	1705
TauI	GCSGC	5 cut(s)	148, 151, 203, 206, 1612
TfiI	GAWTC	3 cut(s)	274, 364, 1651
Tru1I	TTAA	7 cut(s)	65, 846, 927, 963, 1158, 1644, 1839
Tru9I	TTAA	7 cut(s)	65, 846, 927, 963, 1158, 1644, 1839
TscAI	CASTG	4 cut(s)	642, 820, 952, 1066
TseFI	GTSAC	2 cut(s)	455, 1730
TseI	GCWGC	2 cut(s)	136, 1175
Tsp45I	GTSAC	2 cut(s)	455, 1730
TspDTI	ATGAA	8 cut(s)	485, 542, 717, 882, 894, 1485, 1643, 1688
TspGWI	ACGGA	3 cut(s)	316, 647, 1499
TspRI	CASTG	4 cut(s)	642, 820, 952, 1066
Van91I	CCANNNNNTGG	1 cut(s)	88
VspI	ATTAAT	1 cut(s)	1839
XapI	RAATTY	7 cut(s)	44, 640, 705, 870, 922, 1436, 1768
XmaJI	CCTAGG	1 cut(s)	1526
XmiI	GTMKAC	1 cut(s)	819
XmnI	GAANNNNTTC	1 cut(s)	1785
XspI	CTAG	3 cut(s)	1527, 1661, 1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.