Prupe.1G490100_v2.0.a1

Amino-acid permease BAT1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001248
Physical Location & Seq
Reverse (-)
40795461 .. 40798000
2540 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G490100.1

Sequence Viewer

Length: 1536 bp
ATGGATTCTGGAGAAAAACGTCTCAATGAGCTTGGATACAAGCAAGAACTCAGAAGGGAAATGACTCTGTTCAAGACAATGGCAATAACATTTTCATGCATATCTGCATTCAGTGGGACACCTCTGTATGGCCAAAGCTTGCGTTATGCAGGTCCTGCAACCTTAGTATGGGGATGGGTGGTTGTTAGTTTCTTCACTTGGTTTGTTGCAATCGCCATGGCGGAGATTTGCTCCTCTTTCCCGACCACAGGTTCTCTTTATTTCTGGGCTGCCCATTTGGCTGGACCCAGGTGGGGGCCATTTGCTTCATGGTGTTGTGCTTGGCTTGAGACTATTGGTGTGATATTTGCTATTGGTGCTCAGACATATTCTGGATCACAAGCATTGCAGATGATCATTCTTTTAGCCACAGGAACAAACAAGGGTGGAGGCTATTTTGCATCAAAGGGTGTGTTTTTGTGCTTGTATATGGCTCTAATCCTCATATGGGCAGTACTAAACACATTTAAATTACAAGTGATAGCATTTCTCAACATCATCTCCATATGGTGGCAGGTAGTTGGTGGCTTGCTTGTGATTGTTATGCTTCCTCTGGTGGCCCAGTCAACACAGCCAGCTTCTTATGTGTTCACTCACTTTGAAACATCTCCTGAGTCAACTGGAGTCTCTAGCATACCTTATGCAGTGATTTTATCAGTGCTTCTGAGCATATACTCTCTATTCGGCTACGACGCTGCAGCTCATCTTACTGAGGAGACAAAAGGCGCAGACAGAACTGGTCCTAAAGCTATTCTATCTAGTCTTGGTATCATATCAGTTTTTGGCTGGGCTTATTACTTGTCTCTAACTTTCAGCATCAGGGATCTGGAGTATTTATACAATGCAGACAATGAGACTGCTGGTGCACTTGTACCAGCACAGATTATATATGATGCATTCTATGGGAGGTTCCAAAATTCAACTGGAGCTGTGGTTTTCCTGTGTATCATCTGGGGTTCCTACTTCTTTTGTGGGTTGTCTACTACCACCACCGCTGCCCGAGTAGTTTATGCTCTATCAAGGGATAACGGTATCCCATTTTCACCAATCTGGAGGAAATTGCACCCGAGGACCAAGGTTCCAACAAATGCCGTGTGGCTCTGCGCAGCTATCGGTTTGCTGCTTGGACTGCCCATCTTGAAACTTGATGTAGTATTCACAGCCTTCATTTCAGTTAGTACAATTGGCTGGGTGGGTAGTTATGCAGTGCCAATTTTTGCTAGGCTGGTGATGGCTGAAGAGAACTTCAAACCAGGACCCTTTTATTTGGGTAGAGCAAGCAGGCCAGTTTGCTTGGTGGCCTTCCTGTGGATATGCTATGCCTGTTCAGCCTTCCTATTGCCAACTTTCTACCCTCTTGGATGGAAAACCTTCAATTATGCACCAGTAGCTGTCAGTGTTGTTTTGACAGTGGTAATGCTTTGGTGGGCTTTGGATGCAAGGAATTGGTTCAAGGGACCTGTAAGAAACATTGATGTACGAAACGAAAACTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AA_permease_2

Protein Analysis

512

Amino Acids

56.49

Weight (kDa)

8.75

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1144
Acc36I ACCTGC 2 cut(s) 140, 544
AccB7I CCANNNNNTGG 1 cut(s) 549
AccI GTMKAC 1 cut(s) 1019
AciI CCGC 2 cut(s) 221, 1032
AclWI GGATC 2 cut(s) 382, 870
AcoI YGGCCR 1 cut(s) 130
AcsI RAATTY 1 cut(s) 955
AcuI CTGAAG 1 cut(s) 1296
AfaI GTAC 4 cut(s) 495, 912, 1219, 1518
AfiI CCNNNNNNNGG 8 cut(s) 128, 168, 248, 293, 294, 487, 549, 1347
AgsI TTSAA 7 cut(s) 73, 641, 960, 1180, 1288, 1414, 1492
AjnI CCWGG 2 cut(s) 287, 1291
AluBI AGCT 8 cut(s) 31, 138, 617, 740, 788, 968, 1148, 1430
AluI AGCT 8 cut(s) 31, 138, 617, 740, 788, 968, 1148, 1430
Alw21I GWGCWC 2 cut(s) 361, 907
Alw26I GTCTC 6 cut(s) 26, 323, 670, 749, 846, 887
Alw44I GTGCAC 1 cut(s) 903
AlwI GGATC 2 cut(s) 382, 870
AlwNI CAGNNNCTG 2 cut(s) 155, 1430
Ama87I CYCGRG 2 cut(s) 1038, 1105
AoxI GGCC 5 cut(s) 130, 296, 597, 1322, 1338
ApaLI GTGCAC 1 cut(s) 903
ApeKI GCWGC 6 cut(s) 269, 734, 737, 1034, 1145, 1159
ApoI RAATTY 1 cut(s) 955
Asp700I GAANNNNTTC 2 cut(s) 1409, 1487
AspLEI GCGC 2 cut(s) 767, 1145
AspS9I GGNCC 8 cut(s) 152, 284, 296, 598, 779, 1110, 1295, 1496
AsuHPI GGTGA 2 cut(s) 1074, 1279
AvaI CYCGRG 2 cut(s) 1038, 1105
AvaII GGWCC 6 cut(s) 152, 284, 779, 1110, 1295, 1496
BaeGI GKGCMC 1 cut(s) 907
BalI TGGCCA 1 cut(s) 132
Bbv12I GWGCWC 2 cut(s) 361, 907
BbvI GCAGC 6 cut(s) 256, 721, 749, 1021, 1146, 1157
BccI CCATC 4 cut(s) 168, 1181, 1264, 1395
BceAI ACGGC 1 cut(s) 1115
BciT130I CCWGG 2 cut(s) 289, 1293
BciVI GTATCC 2 cut(s) 29, 1082
BclI TGATCA 1 cut(s) 393
BcoDI GTCTC 6 cut(s) 26, 323, 670, 749, 846, 887
BfaI CTAG 3 cut(s) 669, 798, 1260
BfmI CTRYAG 1 cut(s) 735
BfuAI ACCTGC 2 cut(s) 140, 544
BfuI GTATCC 2 cut(s) 29, 1082
BglI GCCNNNNNGGC 1 cut(s) 278
BisI GCNGC 6 cut(s) 270, 735, 738, 1035, 1146, 1160
BlsI GCNGC 6 cut(s) 271, 736, 739, 1036, 1147, 1161
BmcAI AGTACT 1 cut(s) 495
Bme1390I CCNGG 2 cut(s) 289, 1293
Bme18I GGWCC 6 cut(s) 152, 284, 779, 1110, 1295, 1496
BmeT110I CYCGRG 2 cut(s) 1038, 1105
BmgT120I GGNCC 8 cut(s) 152, 284, 296, 598, 779, 1110, 1295, 1496
BmiI GGNNCC 7 cut(s) 286, 297, 950, 997, 1119, 1297, 1497
BmrFI CCNGG 2 cut(s) 289, 1293
BmrI ACTGGG 1 cut(s) 595
BmsI GCATC 4 cut(s) 449, 864, 922, 1465
BmuI ACTGGG 1 cut(s) 595
BplI GAGNNNNNCTC 2 cut(s) 215, 247
BpmI CTGGAG 5 cut(s) 30, 681, 887, 984, 1111
BpuEI CTTGAG 1 cut(s) 347
BsaJI CCNNGG 4 cut(s) 216, 287, 1106, 1113
BsaXI ACNNNNNCTCC 4 cut(s) 524, 554, 957, 987
Bsc4I CCNNNNNNNGG 8 cut(s) 128, 168, 248, 293, 294, 487, 549, 1347
Bse1I ACTGG 6 cut(s) 601, 664, 781, 967, 1325, 1424
Bse3DI GCAATG 1 cut(s) 383
BseBI CCWGG 2 cut(s) 289, 1293
BseDI CCNNGG 4 cut(s) 216, 287, 1106, 1113
BseGI GGATG 3 cut(s) 179, 1406, 1480
BseLI CCNNNNNNNGG 8 cut(s) 128, 168, 248, 293, 294, 487, 549, 1347
BseMI GCAATG 1 cut(s) 383
BseMII CTCAG 5 cut(s) 64, 374, 642, 695, 741
BseNI ACTGG 6 cut(s) 601, 664, 781, 967, 1325, 1424
BseRI GAGGAG 2 cut(s) 223, 767
BseSI GKGCMC 1 cut(s) 907
BseXI GCAGC 6 cut(s) 256, 721, 749, 1021, 1146, 1157
BseYI CCCAGC 2 cut(s) 825, 1227
BshFI GGCC 5 cut(s) 132, 298, 599, 1324, 1340
BsiHKAI GWGCWC 2 cut(s) 361, 907
BsiHKCI CYCGRG 2 cut(s) 1038, 1105
BslFI GGGAC 2 cut(s) 130, 1509
BslI CCNNNNNNNGG 8 cut(s) 128, 168, 248, 293, 294, 487, 549, 1347
BsmAI GTCTC 6 cut(s) 26, 323, 670, 749, 846, 887
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 2 cut(s) 130, 1509
BsmI GAATGC 2 cut(s) 107, 935
BsnI GGCC 5 cut(s) 132, 298, 599, 1324, 1340
BsoBI CYCGRG 2 cut(s) 1038, 1105
Bsp1286I GDGCHC 2 cut(s) 361, 907
Bsp143I GATC 3 cut(s) 374, 393, 862
Bsp19I CCATGG 1 cut(s) 216
BspACI CCGC 2 cut(s) 221, 1032
BspANI GGCC 5 cut(s) 132, 298, 599, 1324, 1340
BspCNI CTCAG 5 cut(s) 63, 373, 643, 696, 742
BspLI GGNNCC 7 cut(s) 286, 297, 950, 997, 1119, 1297, 1497
BspMAI CTGCAG 1 cut(s) 739
BspMI ACCTGC 2 cut(s) 140, 544
BspPI GGATC 2 cut(s) 382, 870
BsrDI GCAATG 1 cut(s) 383
BsrI ACTGG 6 cut(s) 601, 664, 781, 967, 1325, 1424
BssECI CCNNGG 4 cut(s) 216, 287, 1106, 1113
BssMI GATC 3 cut(s) 374, 393, 862
BssT1I CCWWGG 2 cut(s) 216, 1113
Bst2UI CCWGG 2 cut(s) 289, 1293
Bst4CI ACNGT 2 cut(s) 1070, 1450
Bst6I CTCTTC 1 cut(s) 1272
BstAPI GCANNNNNTGC 1 cut(s) 155
BstC8I GCNNGC 5 cut(s) 140, 569, 615, 1318, 1322
BstDEI CTNAG 6 cut(s) 50, 163, 360, 651, 704, 750
BstDSI CCRYGG 1 cut(s) 216
BstF5I GGATG 3 cut(s) 179, 1406, 1480
BstHHI GCGC 2 cut(s) 767, 1145
BstKTI GATC 3 cut(s) 377, 396, 865
BstMAI GTCTC 6 cut(s) 26, 323, 670, 749, 846, 887
BstMBI GATC 3 cut(s) 374, 393, 862
BstMWI GCNNNNNNNGC 7 cut(s) 155, 278, 356, 1168, 1367, 1427, 1475
BstNI CCWGG 2 cut(s) 289, 1293
BstSCI CCNGG 2 cut(s) 287, 1291
BstSFI CTRYAG 1 cut(s) 735
BstSLI GKGCMC 1 cut(s) 907
BstV1I GCAGC 6 cut(s) 256, 721, 749, 1021, 1146, 1157
BstX2I RGATCY 1 cut(s) 862
BstXI CCANNNNNNTGG 1 cut(s) 281
BstYI RGATCY 1 cut(s) 862
BsuI GTATCC 2 cut(s) 29, 1082
BsuRI GGCC 5 cut(s) 132, 298, 599, 1324, 1340
BtgI CCRYGG 1 cut(s) 216
BtsCI GGATG 3 cut(s) 179, 1406, 1480
BtsI GCAGTG 2 cut(s) 690, 1251
BtsIMutI CAGTG 6 cut(s) 118, 690, 702, 1251, 1441, 1455
BveI ACCTGC 2 cut(s) 140, 544
Cac8I GCNNGC 5 cut(s) 140, 569, 615, 1318, 1322
CaiI CAGNNNCTG 2 cut(s) 155, 1430
CfoI GCGC 2 cut(s) 767, 1145
Cfr13I GGNCC 8 cut(s) 152, 284, 296, 598, 779, 1110, 1295, 1496
CseI GACGC 1 cut(s) 740
Csp6I GTAC 4 cut(s) 494, 911, 1218, 1517
CviAII CATG 3 cut(s) 96, 217, 309
CviQI GTAC 4 cut(s) 494, 911, 1218, 1517
DdeI CTNAG 6 cut(s) 50, 163, 360, 651, 704, 750
DpnI GATC 3 cut(s) 376, 395, 864
DpnII GATC 3 cut(s) 374, 393, 862
DraI TTTAAA 1 cut(s) 508
EaeI YGGCCR 1 cut(s) 130
Eam1104I CTCTTC 1 cut(s) 1272
EarI CTCTTC 1 cut(s) 1272
EciI GGCGGA 1 cut(s) 236
Eco130I CCWWGG 2 cut(s) 216, 1113
Eco47I GGWCC 6 cut(s) 152, 284, 779, 1110, 1295, 1496
Eco57I CTGAAG 1 cut(s) 1296
Eco88I CYCGRG 2 cut(s) 1038, 1105
EcoO109I RGGNCCY 3 cut(s) 152, 1295, 1496
EcoRII CCWGG 2 cut(s) 287, 1291
EcoT14I CCWWGG 2 cut(s) 216, 1113
EcoT22I ATGCAT 2 cut(s) 101, 937
ErhI CCWWGG 2 cut(s) 216, 1113
Esp3I CGTCTC 1 cut(s) 26
FaeI CATG 3 cut(s) 99, 220, 312
FaqI GGGAC 2 cut(s) 130, 1509
FatI CATG 3 cut(s) 95, 216, 308
FauNDI CATATG 2 cut(s) 485, 545
FbaI TGATCA 1 cut(s) 393
FblI GTMKAC 1 cut(s) 1019
Fnu4HI GCNGC 6 cut(s) 270, 735, 738, 1035, 1146, 1160
FokI GGATG 3 cut(s) 186, 1413, 1487
Fsp4HI GCNGC 6 cut(s) 270, 735, 738, 1035, 1146, 1160
FspBI CTAG 3 cut(s) 669, 798, 1260
FspI TGCGCA 1 cut(s) 1144
GlaI GCGC 2 cut(s) 766, 1144
GluI GCNGC 6 cut(s) 270, 735, 738, 1035, 1146, 1160
GsaI CCCAGC 2 cut(s) 829, 1231
GsuI CTGGAG 5 cut(s) 30, 681, 887, 984, 1111
HaeIII GGCC 5 cut(s) 132, 298, 599, 1324, 1340
HgaI GACGC 1 cut(s) 740
HhaI GCGC 2 cut(s) 767, 1145
Hin1II CATG 3 cut(s) 99, 220, 312
Hin6I GCGC 2 cut(s) 765, 1143
HinP1I GCGC 2 cut(s) 765, 1143
HincII GTYRAC 2 cut(s) 606, 657
HindII GTYRAC 2 cut(s) 606, 657
HindIII AAGCTT 1 cut(s) 136
HinfI GANTC 4 cut(s) 5, 64, 653, 663
HphI GGTGA 2 cut(s) 1074, 1279
Hpy166II GTNNAC 5 cut(s) 606, 630, 657, 905, 1020
Hpy188I TCNGA 3 cut(s) 53, 363, 705
Hpy188III TCNNGA 8 cut(s) 9, 73, 241, 372, 650, 866, 1090, 1177
Hpy8I GTNNAC 5 cut(s) 606, 630, 657, 905, 1020
Hpy99I CGWCG 1 cut(s) 734
HpyAV CCTTC 5 cut(s) 48, 1213, 1351, 1381, 1420
HpyCH4III ACNGT 2 cut(s) 1070, 1450
HpyCH4IV ACGT 1 cut(s) 19
HpyF10VI GCNNNNNNNGC 7 cut(s) 155, 278, 356, 1168, 1367, 1427, 1475
HpyF3I CTNAG 6 cut(s) 50, 163, 360, 651, 704, 750
HpySE526I ACGT 1 cut(s) 19
Hsp92II CATG 3 cut(s) 99, 220, 312
HspAI GCGC 2 cut(s) 765, 1143
Ksp22I TGATCA 1 cut(s) 393
Kzo9I GATC 3 cut(s) 374, 393, 862
LmnI GCTCC 2 cut(s) 236, 965
Lsp1109I GCAGC 6 cut(s) 256, 721, 749, 1021, 1146, 1157
LweI GCATC 4 cut(s) 449, 864, 922, 1465
MaeI CTAG 3 cut(s) 669, 798, 1260
MaeII ACGT 1 cut(s) 19
MalI GATC 3 cut(s) 376, 395, 864
MboI GATC 3 cut(s) 374, 393, 862
MboII GAAGA 2 cut(s) 184, 1289
MfeI CAATTG 1 cut(s) 1221
MflI RGATCY 1 cut(s) 862
MhlI GDGCHC 2 cut(s) 361, 907
MlsI TGGCCA 1 cut(s) 132
MluCI AATT 7 cut(s) 509, 955, 1097, 1221, 1251, 1414, 1483
MluNI TGGCCA 1 cut(s) 132
MlyI GAGTC 3 cut(s) 58, 662, 672
MmeI TCCRAC 1 cut(s) 1145
Mox20I TGGCCA 1 cut(s) 132
Mph1103I ATGCAT 2 cut(s) 101, 937
MroXI GAANNNNTTC 2 cut(s) 1409, 1487
MscI TGGCCA 1 cut(s) 132
MseI TTAA 1 cut(s) 507
MslI CAYNNNNRTG 1 cut(s) 94
Msp20I TGGCCA 1 cut(s) 132
MspA1I CMGCKG 1 cut(s) 1034
MspR9I CCNGG 2 cut(s) 289, 1293
MunI CAATTG 1 cut(s) 1221
Mva1269I GAATGC 2 cut(s) 107, 935
MvaI CCWGG 2 cut(s) 289, 1293
MwoI GCNNNNNNNGC 7 cut(s) 155, 278, 356, 1168, 1367, 1427, 1475
NcoI CCATGG 1 cut(s) 216
NdeI CATATG 2 cut(s) 485, 545
NdeII GATC 3 cut(s) 374, 393, 862
NlaIII CATG 3 cut(s) 99, 220, 312
NlaIV GGNNCC 7 cut(s) 286, 297, 950, 997, 1119, 1297, 1497
NsbI TGCGCA 1 cut(s) 1144
NsiI ATGCAT 2 cut(s) 101, 937
PctI GAATGC 2 cut(s) 107, 935
PdmI GAANNNNTTC 2 cut(s) 1409, 1487
PfeI GAWTC 1 cut(s) 5
PflMI CCANNNNNTGG 1 cut(s) 549
PkrI GCNGC 6 cut(s) 271, 736, 739, 1036, 1147, 1161
PleI GAGTC 3 cut(s) 58, 661, 671
PpsI GAGTC 3 cut(s) 58, 661, 671
PpuMI RGGWCCY 3 cut(s) 152, 1295, 1496
Psp5II RGGWCCY 3 cut(s) 152, 1295, 1496
Psp6I CCWGG 2 cut(s) 287, 1291
PspFI CCCAGC 2 cut(s) 825, 1227
PspGI CCWGG 2 cut(s) 287, 1291
PspN4I GGNNCC 7 cut(s) 286, 297, 950, 997, 1119, 1297, 1497
PspPI GGNCC 8 cut(s) 152, 284, 296, 598, 779, 1110, 1295, 1496
PspPPI RGGWCCY 3 cut(s) 152, 1295, 1496
PstI CTGCAG 1 cut(s) 739
PstNI CAGNNNCTG 2 cut(s) 155, 1430
PsuI RGATCY 1 cut(s) 862
RsaI GTAC 4 cut(s) 495, 912, 1219, 1518
RsaNI GTAC 4 cut(s) 494, 911, 1218, 1517
RseI CAYNNNNRTG 1 cut(s) 94
SaqAI TTAA 1 cut(s) 507
SatI GCNGC 6 cut(s) 270, 735, 738, 1035, 1146, 1160
Sau3AI GATC 3 cut(s) 374, 393, 862
Sau96I GGNCC 8 cut(s) 152, 284, 296, 598, 779, 1110, 1295, 1496
ScaI AGTACT 1 cut(s) 495
SchI GAGTC 3 cut(s) 58, 662, 672
ScrFI CCNGG 2 cut(s) 289, 1293
SduI GDGCHC 2 cut(s) 361, 907
SfaNI GCATC 4 cut(s) 449, 864, 922, 1465
SfcI CTRYAG 1 cut(s) 735
SinI GGWCC 6 cut(s) 152, 284, 779, 1110, 1295, 1496
SmiI ATTTAAAT 1 cut(s) 508
SmiMI CAYNNNNRTG 1 cut(s) 94
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
Sse9I AATT 7 cut(s) 509, 955, 1097, 1221, 1251, 1414, 1483
SsiI CCGC 2 cut(s) 221, 1032
SspMI CTAG 3 cut(s) 669, 798, 1260
StyD4I CCNGG 2 cut(s) 287, 1291
StyI CCWWGG 2 cut(s) 216, 1113
SwaI ATTTAAAT 1 cut(s) 508
TaaI ACNGT 2 cut(s) 1070, 1450
TaiI ACGT 1 cut(s) 22
TasI AATT 7 cut(s) 509, 955, 1097, 1221, 1251, 1414, 1483
TatI WGTACW 2 cut(s) 493, 1217
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 1 cut(s) 507
Tru9I TTAA 1 cut(s) 507
TscAI CASTG 6 cut(s) 118, 690, 702, 1251, 1441, 1455
TseI GCWGC 6 cut(s) 269, 734, 737, 1034, 1145, 1159
TspDTI ATGAA 3 cut(s) 84, 297, 1195
TspRI CASTG 6 cut(s) 118, 690, 702, 1251, 1441, 1455
Van91I CCANNNNNTGG 1 cut(s) 549
VneI GTGCAC 1 cut(s) 903
VpaK11BI GGWCC 6 cut(s) 152, 284, 779, 1110, 1295, 1496
XapI RAATTY 1 cut(s) 955
XcmI CCANNNNNNNNNTGG 2 cut(s) 306, 959
XmiI GTMKAC 1 cut(s) 1019
XmnI GAANNNNTTC 2 cut(s) 1409, 1487
XspI CTAG 3 cut(s) 669, 798, 1260
ZrmI AGTACT 1 cut(s) 495
Zsp2I ATGCAT 2 cut(s) 101, 937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.