Prupe.1G490200_v2.0.a1

Amino-acid permease BAT1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001248
Physical Location & Seq
Reverse (-)
40798956 .. 40801759
2804 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G490200.1

Sequence Viewer

Length: 1557 bp
ATGACTACCTTGCAGGTTTTGGAAATGGATTCTGGAGAAAAACGTCTCAATGAGCTTGGATACAAGCAAGAACTGAGAAGGGAAATGACACTGTTCAAGACACTGGCAATAACATTTTCATGCATATCAGTGTTTAGTGGGACACCTCTGTATGGCCAAAGCTTGCATTATGCAGGTCCTGCAACCTTAATATGGGGATGGGTAGCTGTCACTTTCTTCACTTGGTTTGTTGCAATTGCCATGGCTGAGATTTGCTCCTCTTTCCCGACAACAGGTTCTCTTTATTTCTGGGCTGCCCAATTGGCTGGACCGAGGTGGGGGCCATTTGCATCATGGTGTTGTGCTTGGCTTGAGACCATTGGAGTGGTATCTGCAATAGGTGCTCAGGCATATTCTGGATCACAAGCATTGCAGATGATCATTCTTTTAGCCACAGGGACAAACAAGGGTGGAGGCTATTTTGCATCAAAGGGTGTGTTCTTGTGCATGTATATGGCTCTAATCATAATTTGGGCAGCACTAAACACATTTGCATTACAAGTGATAGCATATCTCAACATCATTTCCATATGGTGGCAGGTAATCGGTGGGTTGCTTGTGACTATACTGCTTCCGCTGGTGGCACAGTCAACACAACCAGCTTCTTATGTGTTCACTCACTTTGAAACATCTCCTGAGTCAACTGGAATATCTAGCGCACCTTACGCAGTGATTTTATCGGTGCTTCTGAGCATCTACTCTCTATACGGCTATGATGCTGCAGCTCATCTTACTGAGGAGACAAAAGACGCAGACAGAACTGGACCTGTAGCTATTCTATCTAGTCTTGGGATTATATCAGTTTTTGGTTGGGCTTACTACTTAGCCCTGACTTTCAGCATCAGGGATCTAGACTATTTATACAACACAGACAATGAGACTGCTGGTGCACTTGTACCAGCACAAATAATATATGATGCATTCTATGGGAAGTTTCACAATTCAACTGGAGCTGTGGTTTTCCTGTGTATCATCTGGGGTTCCTACTTCTTTTGTGGGCTGTCTGTTACCACCACTGCTGCCCGAGTGGTTTATGCTCTATCAAGGGATAAAGGTATCCCATTTTCACCAATCTGGAGGAAAGTACATCCAAGGAGCAAGGTTCCAACAAATGCCGTGTGGCTCTGCGCAGCCATTGGTTTGCTGCTTGGACTACCCATTTTGAAACTTGATGTAGTGTTCACAGCCATCATTTCAGTTAGTACAATTGGCTGGGTGGGCGGTTATGCAATTCCCATTTTGGCTAGGCTGGTGATGGCTGAAGAAAATTTCAAACCAGGACCCTTTTATTTGGGTAGAGCAAGCAGGACAGTTTGCTTGGTGGCCTTCCTGTGGATATGCTATGCCTGTTCAGCCTTCCTATTGCCAACTTTCTACCCTCTAAGATGGAAAACTTTCAATTATGCACCTGTTGCTCTCACTTTTGTTTTGACACTGATAATGCTTTGGTGGGTTTTGGATGCAAGGAAATGGTTCAAAGGACCTGTAAGAAACATTGATGTACAAGACGGAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AA_permease_2

Protein Analysis

519

Amino Acids

57.12

Weight (kDa)

8.38

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1168
Acc36I ACCTGC 3 cut(s) 4, 164, 568
AccB7I CCANNNNNTGG 1 cut(s) 573
AciI CCGC 2 cut(s) 614, 1260
AclWI GGATC 2 cut(s) 406, 894
AcoI YGGCCR 1 cut(s) 154
AcsI RAATTY 1 cut(s) 1306
AcuI CTGAAG 1 cut(s) 1320
AfaI GTAC 4 cut(s) 936, 1125, 1243, 1542
AfiI CCNNNNNNNGG 6 cut(s) 152, 192, 272, 317, 573, 1371
AgsI TTSAA 7 cut(s) 97, 665, 984, 1204, 1312, 1438, 1516
AjnI CCWGG 1 cut(s) 1315
AluBI AGCT 7 cut(s) 55, 162, 206, 641, 764, 812, 992
AluI AGCT 7 cut(s) 55, 162, 206, 641, 764, 812, 992
Alw21I GWGCWC 2 cut(s) 385, 931
Alw26I GTCTC 4 cut(s) 50, 347, 773, 911
Alw44I GTGCAC 1 cut(s) 927
AlwI GGATC 2 cut(s) 406, 894
AlwNI CAGNNNCTG 1 cut(s) 179
Ama87I CYCGRG 1 cut(s) 1062
AoxI GGCC 3 cut(s) 154, 320, 1362
ApaLI GTGCAC 1 cut(s) 927
ApeKI GCWGC 7 cut(s) 293, 515, 758, 761, 1058, 1169, 1183
ApoI RAATTY 1 cut(s) 1306
Asp700I GAANNNNTTC 2 cut(s) 1433, 1511
AspLEI GCGC 2 cut(s) 698, 1169
AspS9I GGNCC 6 cut(s) 176, 308, 320, 803, 1319, 1520
AsuHPI GGTGA 2 cut(s) 1098, 1303
AvaI CYCGRG 1 cut(s) 1062
AvaII GGWCC 5 cut(s) 176, 308, 803, 1319, 1520
BaeGI GKGCMC 1 cut(s) 931
BalI TGGCCA 1 cut(s) 156
Bbv12I GWGCWC 2 cut(s) 385, 931
BbvI GCAGC 7 cut(s) 280, 527, 745, 773, 1045, 1170, 1181
BccI CCATC 4 cut(s) 192, 1235, 1288, 1419
BceAI ACGGC 2 cut(s) 763, 1139
BciT130I CCWGG 1 cut(s) 1317
BciVI GTATCC 2 cut(s) 53, 1106
BclI TGATCA 1 cut(s) 417
BcoDI GTCTC 4 cut(s) 50, 347, 773, 911
BfaI CTAG 4 cut(s) 693, 822, 890, 1284
BfmI CTRYAG 2 cut(s) 759, 807
BfuAI ACCTGC 3 cut(s) 4, 164, 568
BfuI GTATCC 2 cut(s) 53, 1106
BglI GCCNNNNNGGC 1 cut(s) 302
BisI GCNGC 7 cut(s) 294, 516, 759, 762, 1059, 1170, 1184
BlsI GCNGC 7 cut(s) 295, 517, 760, 763, 1060, 1171, 1185
Bme1390I CCNGG 1 cut(s) 1317
Bme18I GGWCC 5 cut(s) 176, 308, 803, 1319, 1520
BmeT110I CYCGRG 1 cut(s) 1062
BmgT120I GGNCC 6 cut(s) 176, 308, 320, 803, 1319, 1520
BmiI GGNNCC 4 cut(s) 321, 1021, 1143, 1321
BmrFI CCNGG 1 cut(s) 1317
BmsI GCATC 7 cut(s) 338, 473, 741, 745, 888, 946, 1489
BplI GAGNNNNNCTC 2 cut(s) 239, 271
BpmI CTGGAG 3 cut(s) 54, 1008, 1135
Bpu10I CCTNAGC 1 cut(s) 384
BpuEI CTTGAG 1 cut(s) 371
BsaI GGTCTC 1 cut(s) 347
BsaJI CCNNGG 3 cut(s) 240, 311, 1130
BsaXI ACNNNNNCTCC 2 cut(s) 981, 1011
Bsc4I CCNNNNNNNGG 6 cut(s) 152, 192, 272, 317, 573, 1371
Bse1I ACTGG 4 cut(s) 108, 688, 805, 991
Bse3DI GCAATG 1 cut(s) 407
BseBI CCWGG 1 cut(s) 1317
BseDI CCNNGG 3 cut(s) 240, 311, 1130
BseGI GGATG 3 cut(s) 203, 1126, 1504
BseLI CCNNNNNNNGG 6 cut(s) 152, 192, 272, 317, 573, 1371
BseMI GCAATG 1 cut(s) 407
BseMII CTCAG 6 cut(s) 65, 237, 398, 666, 719, 765
BseNI ACTGG 4 cut(s) 108, 688, 805, 991
BseRI GAGGAG 2 cut(s) 247, 791
BseSI GKGCMC 1 cut(s) 931
BseXI GCAGC 7 cut(s) 280, 527, 745, 773, 1045, 1170, 1181
BseYI CCCAGC 1 cut(s) 1251
BshFI GGCC 3 cut(s) 156, 322, 1364
BsiHKAI GWGCWC 2 cut(s) 385, 931
BsiHKCI CYCGRG 1 cut(s) 1062
BslFI GGGAC 2 cut(s) 154, 451
BslI CCNNNNNNNGG 6 cut(s) 152, 192, 272, 317, 573, 1371
BsmAI GTCTC 4 cut(s) 50, 347, 773, 911
BsmBI CGTCTC 1 cut(s) 50
BsmFI GGGAC 2 cut(s) 154, 451
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 3 cut(s) 156, 322, 1364
Bso31I GGTCTC 1 cut(s) 347
BsoBI CYCGRG 1 cut(s) 1062
Bsp1286I GDGCHC 2 cut(s) 385, 931
Bsp1407I TGTACA 1 cut(s) 1540
Bsp143I GATC 3 cut(s) 398, 417, 886
Bsp19I CCATGG 1 cut(s) 240
BspACI CCGC 2 cut(s) 614, 1260
BspANI GGCC 3 cut(s) 156, 322, 1364
BspCNI CTCAG 6 cut(s) 66, 238, 397, 667, 720, 766
BspLI GGNNCC 4 cut(s) 321, 1021, 1143, 1321
BspMAI CTGCAG 1 cut(s) 763
BspMI ACCTGC 3 cut(s) 4, 164, 568
BspPI GGATC 2 cut(s) 406, 894
BspTNI GGTCTC 1 cut(s) 347
BsrDI GCAATG 1 cut(s) 407
BsrGI TGTACA 1 cut(s) 1540
BsrI ACTGG 4 cut(s) 108, 688, 805, 991
BssECI CCNNGG 3 cut(s) 240, 311, 1130
BssMI GATC 3 cut(s) 398, 417, 886
BssT1I CCWWGG 2 cut(s) 240, 1130
Bst2UI CCWGG 1 cut(s) 1317
Bst4CI ACNGT 3 cut(s) 93, 627, 1351
BstAPI GCANNNNNTGC 3 cut(s) 179, 380, 1451
BstAUI TGTACA 1 cut(s) 1540
BstC8I GCNNGC 2 cut(s) 164, 1342
BstDEI CTNAG 8 cut(s) 74, 246, 384, 675, 728, 774, 862, 1421
BstDSI CCRYGG 1 cut(s) 240
BstF5I GGATG 3 cut(s) 203, 1126, 1504
BstHHI GCGC 2 cut(s) 698, 1169
BstKTI GATC 3 cut(s) 401, 420, 889
BstMAI GTCTC 4 cut(s) 50, 347, 773, 911
BstMBI GATC 3 cut(s) 398, 417, 886
BstMWI GCNNNNNNNGC 7 cut(s) 179, 302, 380, 704, 1257, 1391, 1451
BstNI CCWGG 1 cut(s) 1317
BstNSI RCATGY 1 cut(s) 490
BstSCI CCNGG 1 cut(s) 1315
BstSFI CTRYAG 2 cut(s) 759, 807
BstSLI GKGCMC 1 cut(s) 931
BstV1I GCAGC 7 cut(s) 280, 527, 745, 773, 1045, 1170, 1181
BstX2I RGATCY 1 cut(s) 886
BstXI CCANNNNNNTGG 2 cut(s) 305, 364
BstYI RGATCY 1 cut(s) 886
BsuI GTATCC 2 cut(s) 53, 1106
BsuRI GGCC 3 cut(s) 156, 322, 1364
BtgI CCRYGG 1 cut(s) 240
BtsCI GGATG 3 cut(s) 203, 1126, 1504
BtsI GCAGTG 2 cut(s) 714, 1053
BtsIMutI CAGTG 6 cut(s) 89, 101, 135, 714, 1053, 1472
BveI ACCTGC 3 cut(s) 4, 164, 568
Cac8I GCNNGC 2 cut(s) 164, 1342
CaiI CAGNNNCTG 1 cut(s) 179
CfoI GCGC 2 cut(s) 698, 1169
Cfr13I GGNCC 6 cut(s) 176, 308, 320, 803, 1319, 1520
CseI GACGC 1 cut(s) 797
Csp6I GTAC 4 cut(s) 935, 1124, 1242, 1541
CviAII CATG 4 cut(s) 120, 241, 333, 487
CviQI GTAC 4 cut(s) 935, 1124, 1242, 1541
DdeI CTNAG 8 cut(s) 74, 246, 384, 675, 728, 774, 862, 1421
DpnI GATC 3 cut(s) 400, 419, 888
DpnII GATC 3 cut(s) 398, 417, 886
EaeI YGGCCR 1 cut(s) 154
Eco130I CCWWGG 2 cut(s) 240, 1130
Eco31I GGTCTC 1 cut(s) 347
Eco47I GGWCC 5 cut(s) 176, 308, 803, 1319, 1520
Eco57I CTGAAG 1 cut(s) 1320
Eco88I CYCGRG 1 cut(s) 1062
EcoO109I RGGNCCY 3 cut(s) 176, 1319, 1520
EcoRII CCWGG 1 cut(s) 1315
EcoT14I CCWWGG 2 cut(s) 240, 1130
EcoT22I ATGCAT 2 cut(s) 125, 961
ErhI CCWWGG 2 cut(s) 240, 1130
Esp3I CGTCTC 1 cut(s) 50
FaeI CATG 4 cut(s) 123, 244, 336, 490
FaqI GGGAC 2 cut(s) 154, 451
FatI CATG 4 cut(s) 119, 240, 332, 486
FauNDI CATATG 1 cut(s) 569
FbaI TGATCA 1 cut(s) 417
Fnu4HI GCNGC 7 cut(s) 294, 516, 759, 762, 1059, 1170, 1184
FokI GGATG 3 cut(s) 210, 1113, 1511
Fsp4HI GCNGC 7 cut(s) 294, 516, 759, 762, 1059, 1170, 1184
FspBI CTAG 4 cut(s) 693, 822, 890, 1284
FspI TGCGCA 1 cut(s) 1168
GlaI GCGC 2 cut(s) 697, 1168
GluI GCNGC 7 cut(s) 294, 516, 759, 762, 1059, 1170, 1184
GsaI CCCAGC 1 cut(s) 1255
GsuI CTGGAG 3 cut(s) 54, 1008, 1135
HaeIII GGCC 3 cut(s) 156, 322, 1364
HgaI GACGC 1 cut(s) 797
HhaI GCGC 2 cut(s) 698, 1169
Hin1II CATG 4 cut(s) 123, 244, 336, 490
Hin6I GCGC 2 cut(s) 696, 1167
HinP1I GCGC 2 cut(s) 696, 1167
HincII GTYRAC 2 cut(s) 630, 681
HindII GTYRAC 2 cut(s) 630, 681
HindIII AAGCTT 1 cut(s) 160
HinfI GANTC 2 cut(s) 29, 677
HphI GGTGA 2 cut(s) 1098, 1303
Hpy166II GTNNAC 5 cut(s) 630, 654, 681, 929, 1221
Hpy188I TCNGA 1 cut(s) 729
Hpy188III TCNNGA 7 cut(s) 33, 97, 265, 396, 674, 890, 1114
Hpy8I GTNNAC 5 cut(s) 630, 654, 681, 929, 1221
HpyAV CCTTC 3 cut(s) 72, 1375, 1405
HpyCH4III ACNGT 3 cut(s) 93, 627, 1351
HpyCH4IV ACGT 1 cut(s) 43
HpyF10VI GCNNNNNNNGC 7 cut(s) 179, 302, 380, 704, 1257, 1391, 1451
HpyF3I CTNAG 8 cut(s) 74, 246, 384, 675, 728, 774, 862, 1421
HpySE526I ACGT 1 cut(s) 43
Hsp92II CATG 4 cut(s) 123, 244, 336, 490
HspAI GCGC 2 cut(s) 696, 1167
Ksp22I TGATCA 1 cut(s) 417
Kzo9I GATC 3 cut(s) 398, 417, 886
LmnI GCTCC 3 cut(s) 260, 989, 1134
Lsp1109I GCAGC 7 cut(s) 280, 527, 745, 773, 1045, 1170, 1181
LweI GCATC 7 cut(s) 338, 473, 741, 745, 888, 946, 1489
MaeI CTAG 4 cut(s) 693, 822, 890, 1284
MaeII ACGT 1 cut(s) 43
MaeIII GTNAC 3 cut(s) 208, 598, 1045
MalI GATC 3 cut(s) 400, 419, 888
MboI GATC 3 cut(s) 398, 417, 886
MboII GAAGA 2 cut(s) 208, 1313
MfeI CAATTG 3 cut(s) 234, 299, 1245
MflI RGATCY 1 cut(s) 886
MhlI GDGCHC 2 cut(s) 385, 931
MlsI TGGCCA 1 cut(s) 156
MluCI AATT 8 cut(s) 234, 299, 507, 979, 1245, 1269, 1306, 1438
MluNI TGGCCA 1 cut(s) 156
MlyI GAGTC 1 cut(s) 686
MmeI TCCRAC 1 cut(s) 1169
MnlI CCTC 7 cut(s) 156, 268, 306, 446, 769, 1110, 1428
Mox20I TGGCCA 1 cut(s) 156
Mph1103I ATGCAT 2 cut(s) 125, 961
MroXI GAANNNNTTC 2 cut(s) 1433, 1511
MscI TGGCCA 1 cut(s) 156
MseI TTAA 1 cut(s) 188
MslI CAYNNNNRTG 5 cut(s) 118, 128, 334, 362, 491
Msp20I TGGCCA 1 cut(s) 156
MspA1I CMGCKG 1 cut(s) 616
MspR9I CCNGG 1 cut(s) 1317
MunI CAATTG 3 cut(s) 234, 299, 1245
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 1 cut(s) 1317
MwoI GCNNNNNNNGC 7 cut(s) 179, 302, 380, 704, 1257, 1391, 1451
NcoI CCATGG 1 cut(s) 240
NdeI CATATG 1 cut(s) 569
NdeII GATC 3 cut(s) 398, 417, 886
NlaIII CATG 4 cut(s) 123, 244, 336, 490
NlaIV GGNNCC 4 cut(s) 321, 1021, 1143, 1321
NmuCI GTSAC 2 cut(s) 208, 598
NsbI TGCGCA 1 cut(s) 1168
NsiI ATGCAT 2 cut(s) 125, 961
NspI RCATGY 1 cut(s) 490
PctI GAATGC 1 cut(s) 959
PdmI GAANNNNTTC 2 cut(s) 1433, 1511
PfeI GAWTC 1 cut(s) 29
PflMI CCANNNNNTGG 1 cut(s) 573
PkrI GCNGC 7 cut(s) 295, 517, 760, 763, 1060, 1171, 1185
PleI GAGTC 1 cut(s) 685
PpsI GAGTC 1 cut(s) 685
PpuMI RGGWCCY 3 cut(s) 176, 1319, 1520
Psp5II RGGWCCY 3 cut(s) 176, 1319, 1520
Psp6I CCWGG 1 cut(s) 1315
PspFI CCCAGC 1 cut(s) 1251
PspGI CCWGG 1 cut(s) 1315
PspN4I GGNNCC 4 cut(s) 321, 1021, 1143, 1321
PspPI GGNCC 6 cut(s) 176, 308, 320, 803, 1319, 1520
PspPPI RGGWCCY 3 cut(s) 176, 1319, 1520
PstI CTGCAG 1 cut(s) 763
PstNI CAGNNNCTG 1 cut(s) 179
PsuI RGATCY 1 cut(s) 886
RsaI GTAC 4 cut(s) 936, 1125, 1243, 1542
RsaNI GTAC 4 cut(s) 935, 1124, 1242, 1541
RseI CAYNNNNRTG 5 cut(s) 118, 128, 334, 362, 491
SaqAI TTAA 1 cut(s) 188
SatI GCNGC 7 cut(s) 294, 516, 759, 762, 1059, 1170, 1184
Sau3AI GATC 3 cut(s) 398, 417, 886
Sau96I GGNCC 6 cut(s) 176, 308, 320, 803, 1319, 1520
SchI GAGTC 1 cut(s) 686
ScrFI CCNGG 1 cut(s) 1317
SduI GDGCHC 2 cut(s) 385, 931
SfaNI GCATC 7 cut(s) 338, 473, 741, 745, 888, 946, 1489
SfcI CTRYAG 2 cut(s) 759, 807
SinI GGWCC 5 cut(s) 176, 308, 803, 1319, 1520
SmiMI CAYNNNNRTG 5 cut(s) 118, 128, 334, 362, 491
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
Sse9I AATT 8 cut(s) 234, 299, 507, 979, 1245, 1269, 1306, 1438
SsiI CCGC 2 cut(s) 614, 1260
SspMI CTAG 4 cut(s) 693, 822, 890, 1284
StyD4I CCNGG 1 cut(s) 1315
StyI CCWWGG 2 cut(s) 240, 1130
TaaI ACNGT 3 cut(s) 93, 627, 1351
TaiI ACGT 1 cut(s) 46
TaqII GACCGA 1 cut(s) 325
TasI AATT 8 cut(s) 234, 299, 507, 979, 1245, 1269, 1306, 1438
TatI WGTACW 3 cut(s) 1123, 1241, 1540
TfiI GAWTC 1 cut(s) 29
Tru1I TTAA 1 cut(s) 188
Tru9I TTAA 1 cut(s) 188
TscAI CASTG 6 cut(s) 96, 108, 135, 714, 1060, 1479
TseFI GTSAC 2 cut(s) 208, 598
TseI GCWGC 7 cut(s) 293, 515, 758, 761, 1058, 1169, 1183
Tsp45I GTSAC 2 cut(s) 208, 598
TspDTI ATGAA 1 cut(s) 108
TspRI CASTG 6 cut(s) 96, 108, 135, 714, 1060, 1479
Van91I CCANNNNNTGG 1 cut(s) 573
VneI GTGCAC 1 cut(s) 927
VpaK11BI GGWCC 5 cut(s) 176, 308, 803, 1319, 1520
XapI RAATTY 1 cut(s) 1306
XbaI TCTAGA 1 cut(s) 889
XceI RCATGY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 1 cut(s) 330
XmnI GAANNNNTTC 2 cut(s) 1433, 1511
XspI CTAG 4 cut(s) 693, 822, 890, 1284
Zsp2I ATGCAT 2 cut(s) 125, 961
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.