Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002606

Physical Location & Seq

Genomic Coordinates Reverse (-)

5466375 .. 5468252

Gene Structure 1878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G047200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCTCGTCACAGAGATGAAGATGACTACGAACCAGACCAAGTTCTAGATGGGGATGAAGAAGAGGAACATGAGGAGGAGCAGGGAGGACAAATATCCAGACAGAAGCGGAGGAGATCGGATTTCAGAGACGATGATGAGGCTTATGGTGGTGGTGTGAGTCGTAAACGGAGGAATAAGAGGCCTATTGGGTCAAAGTTTTTTGATATCGAGGCCGAGGTCGATAACGATGAGGAGGAGGAAGAGGAAGATGAGGGCGAGGACGACTTCATTGTTGATACTGGAGCTGATCTCCCTGAAGAAGAACATGATGGTAGAAGGATGCATCGTCATCGTCCATTGCGGCCGCAAGAAGATGAGCAAGAAGAAGATGTTGAAGCGCTTGAGAGAAGAATTCAAGCGCGGTATGCAAGGTCATCACCTAGTCGTGCAGAATACGACGAGGAGGAGACAACTGATTTGGTGGTGAATCAGCAAGCTCTTTTACCTTGTGTTAGGGACCCAAAGTTGTGGATGGTGAAATGCGCGATCGGTCGTGAGCGAGAGGCAGTTGTTTGCTTAATGCAAAAGTATATTGATAAACCTAAACTGAACATCAAGTCTGCTGTTGCCCTAGACCACCTCAAAAGCTTTATATACATTGAAGCCGACAACGAAGCCCATGTGAGGGAGGCTTGCAAAGGTCTGCGCAATATACTTGCCCTACATAAGGTAAACCGTGTTCCGATCGGAGAAATGACTGACGTTCTTTCGGTTGAAAGCAAGGCAATTGATGTTTCTAGGGGCACATGGGTCAGAATGAAGATGGGGACCTATAAAGGAGACCTTGCCAAGGTTGTCGGTGTCGATGATGTGCGGCAGAGAGTCAGGGTAAAATTAATTCCAAGGATTGATTTACAAGCTATTGCAAATAAACTGGAGGGCAGACAAGTTGTGAAAAAGAAGGCATTTGTTCCTCCTCCACGCTTTATGAATATTGATGAAGCAAAACAACTGCATATTCGTGTAGAGCGTAGACGAGATCCGGTGACTGGTGATTACTTTGAGAGTATTGATGGCATGCTGTTTAAAGATGGTTTCCTGTACAAGGCAGTATCGATGAAATCAATTAGCTCTCAAAACATACGTCCCACTTTGGATGAACTTGAAAAATTCCGGAAACCCGGGGAGAATGGTGCCCGTTTGTCAACTTTATTTTCAAACAGAAAGAAGGGACCCTTTGTGAAGGGTGATACAGTTATTGTTGTCAAGGGAGATCTTAAAAATTTGAAAGGATGGGTTGAGAAAGTTGAGGGAGAGATTGTTCATATCAGGCCCGAAATTAAACAACTTCCAAAAACTCTTGCCTTAAACGAAAAAGAGCTTTGCAAATACTTCGAACCTGGGAATCATGTGAAAGTTGTATCTGGTACTCTGGAAGGTGCAACTGGTATGGTTGTTAAGGTTGAGCAGCATGTGCTCATCATTTTATCCGATATAACCAAGGAACATATCCCTGTGTTTGCTGATGATGTTGTGGAGAGTTCTGAGGTGACATCCGCTAGTTGCTATTCTGATGCAGGAGCATCTACAAGGCTCTCCAAGAGTACTTGGGCCCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032044 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KOW Spt5-NGN Spt5_N

Protein Analysis

534

Amino Acids

60.86

Weight (kDa)

5.56

Isoelectric Point (pI)

54.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08350
fragaria_vesca	FvH4_2g14770 FvH4_2g14770 FvH4_2g14770 FvH4_7g15891 FvH4_7g15900
malus_domestica	MD01G1075900.v1.1 MD05G1013100.v1.1 MD10G1013600.v1.1
prunus_persica	Prupe.2G047200_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1
pyrus_communis	pycom01g10480 pycom05g00760 pycom10g00830
rosa_chinensis	RchiOBHm_Chr1g0358771 RchiOBHm_Chr6g0277331
rosa_laevigata	RLG00000013309 RLG00000015056 RLG00000027924 RLG00000027930 RLG00000027931
rosa_multiflora	Rmu_co8026512.1_g000001 Rmu_sc0000030.1_g000027 Rmu_sc0017529.1_g000003 Rmu_sc0031713.1_g000002
rosa_roxburghii	Rroxscaffold_4G00297640 Rroxscaffold_7G00191440
rosa_rugosa	Rorug01G0264800 Rorug01G0265100 Rorug06G0107200
rosa_samantha	Rh1AG279200 Rh1BG245800 Rh1CG263000 Rh1DG274100 Rh6BG222000 Rh6DG215000
rosa_wichuraiana	Rw1G024810 Rw6G019000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	689
AccB1I	GGYRCC	1 cut(s)	1175
AccI	GTMKAC	1 cut(s)	1015
AccII	CGCG	2 cut(s)	403, 527
AccIII	TCCGGA	1 cut(s)	1155
AciI	CCGC	6 cut(s)	109, 343, 347, 403, 856, 1539
AclWI	GGATC	1 cut(s)	1016
AcoI	YGGCCR	1 cut(s)	344
AcsI	RAATTY	3 cut(s)	393, 1151, 1264
AcuI	CTGAAG	1 cut(s)	318
AfaI	GTAC	3 cut(s)	1085, 1411, 1588
AfeI	AGCGCT	1 cut(s)	381
AfiI	CCNNNNNNNGG	6 cut(s)	666, 667, 709, 832, 1031, 1087
AgsI	TTSAA	7 cut(s)	377, 398, 644, 758, 1148, 1200, 1270
AjnI	CCWGG	1 cut(s)	1381
AloI	GAACNNNNNNTCC	2 cut(s)	1287, 1319
AluBI	AGCT	6 cut(s)	287, 479, 630, 902, 1113, 1363
AluI	AGCT	6 cut(s)	287, 479, 630, 902, 1113, 1363
Alw21I	GWGCWC	1 cut(s)	1461
Alw26I	GTCTC	3 cut(s)	123, 443, 816
AlwI	GGATC	1 cut(s)	1016
Ama87I	CYCGRG	1 cut(s)	1163
Aor13HI	TCCGGA	1 cut(s)	1155
Aor51HI	AGCGCT	1 cut(s)	381
AoxI	GGCC	5 cut(s)	182, 213, 344, 1313, 1593
ApaI	GGGCCC	1 cut(s)	1597
ApeKI	GCWGC	1 cut(s)	1450
ApoI	RAATTY	3 cut(s)	393, 1151, 1264
ArsI	GACNNNNNNTTYG	4 cut(s)	442, 474, 1111, 1143
AseI	ATTAAT	1 cut(s)	878
AspLEI	GCGC	4 cut(s)	382, 403, 527, 690
AspS9I	GGNCC	6 cut(s)	499, 810, 1214, 1314, 1593, 1594
AsuC2I	CCSGG	2 cut(s)	1164, 1165
AsuHPI	GGTGA	7 cut(s)	411, 478, 529, 1039, 1046, 1241, 1543
AsuII	TTCGAA	1 cut(s)	1377
AvaI	CYCGRG	1 cut(s)	1163
AvaII	GGWCC	3 cut(s)	499, 810, 1214
BaeGI	GKGCMC	3 cut(s)	788, 1180, 1597
BanI	GGYRCC	1 cut(s)	1175
BanII	GRGCYC	1 cut(s)	1597
Bbv12I	GWGCWC	1 cut(s)	1461
BbvI	GCAGC	1 cut(s)	1462
BccI	CCATC	7 cut(s)	44, 305, 508, 799, 1049, 1067, 1269
BcgI	CGANNNNNNTGC	4 cut(s)	314, 348, 1357, 1391
BciT130I	CCWGG	1 cut(s)	1383
BcnI	CCSGG	2 cut(s)	1164, 1165
BcoDI	GTCTC	3 cut(s)	123, 443, 816
BfaI	CTAG	5 cut(s)	47, 423, 614, 780, 1542
BfoI	RGCGCY	1 cut(s)	383
BglII	AGATCT	1 cut(s)	1255
BisI	GCNGC	4 cut(s)	344, 347, 857, 1451
BlsI	GCNGC	4 cut(s)	345, 348, 858, 1452
BmcAI	AGTACT	1 cut(s)	1588
Bme1390I	CCNGG	3 cut(s)	1164, 1165, 1383
Bme18I	GGWCC	3 cut(s)	499, 810, 1214
BmeT110I	CYCGRG	1 cut(s)	1163
BmgT120I	GGNCC	6 cut(s)	499, 810, 1214, 1314, 1593, 1594
BmiI	GGNNCC	7 cut(s)	500, 501, 811, 1177, 1215, 1216, 1595
BmrFI	CCNGG	3 cut(s)	1164, 1165, 1383
BmsI	GCATC	4 cut(s)	312, 334, 1546, 1574
BplI	GAGNNNNNCTC	2 cut(s)	276, 308
BpmI	CTGGAG	2 cut(s)	303, 938
Bpu14I	TTCGAA	1 cut(s)	1377
BpuEI	CTTGAG	1 cut(s)	404
BpuMI	CCSGG	2 cut(s)	1164, 1165
Bsa29I	ATCGAT	1 cut(s)	1097
BsaI	GGTCTC	1 cut(s)	816
BsaJI	CCNNGG	7 cut(s)	216, 831, 884, 1163, 1164, 1382, 1482
BsaWI	WCCGGW	2 cut(s)	1024, 1155
BsaXI	ACNNNNNCTCC	2 cut(s)	1287, 1317
Bsc4I	CCNNNNNNNGG	6 cut(s)	666, 667, 709, 832, 1031, 1087
Bse1I	ACTGG	4 cut(s)	286, 921, 1036, 1432
Bse3DI	GCAATG	1 cut(s)	338
BseAI	TCCGGA	1 cut(s)	1155
BseBI	CCWGG	1 cut(s)	1383
BseCI	ATCGAT	1 cut(s)	1097
BseDI	CCNNGG	7 cut(s)	216, 831, 884, 1163, 1164, 1382, 1482
BseGI	GGATG	6 cut(s)	61, 327, 519, 1144, 1280, 1535
BseLI	CCNNNNNNNGG	6 cut(s)	666, 667, 709, 832, 1031, 1087
BseMI	GCAATG	1 cut(s)	338
BseMII	CTCAG	1 cut(s)	1518
BseNI	ACTGG	4 cut(s)	286, 921, 1036, 1432
BseRI	GAGGAG	8 cut(s)	89, 92, 127, 248, 251, 458, 461, 948
BseSI	GKGCMC	3 cut(s)	788, 1180, 1597
BseX3I	CGGCCG	1 cut(s)	344
BseXI	GCAGC	1 cut(s)	1462
BsgI	GTGCAG	1 cut(s)	450
Bsh1236I	CGCG	2 cut(s)	403, 527
Bsh1285I	CGRYCG	4 cut(s)	347, 531, 535, 729
BshFI	GGCC	5 cut(s)	184, 215, 346, 1315, 1595
BshNI	GGYRCC	1 cut(s)	1175
BshVI	ATCGAT	1 cut(s)	1097
BsiEI	CGRYCG	4 cut(s)	347, 531, 535, 729
BsiHKAI	GWGCWC	1 cut(s)	1461
BsiHKCI	CYCGRG	1 cut(s)	1163
BsiSI	CCGG	3 cut(s)	1025, 1156, 1164
BslFI	GGGAC	4 cut(s)	512, 823, 1113, 1227
BslI	CCNNNNNNNGG	6 cut(s)	666, 667, 709, 832, 1031, 1087
BsmAI	GTCTC	3 cut(s)	123, 443, 816
BsmBI	CGTCTC	1 cut(s)	123
BsmFI	GGGAC	4 cut(s)	512, 823, 1113, 1227
BsnI	GGCC	5 cut(s)	184, 215, 346, 1315, 1595
Bso31I	GGTCTC	1 cut(s)	816
BsoBI	CYCGRG	1 cut(s)	1163
Bsp119I	TTCGAA	1 cut(s)	1377
Bsp120I	GGGCCC	1 cut(s)	1593
Bsp1286I	GDGCHC	4 cut(s)	788, 1180, 1461, 1597
Bsp13I	TCCGGA	1 cut(s)	1155
Bsp1407I	TGTACA	1 cut(s)	1083
Bsp143I	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
BspACI	CCGC	6 cut(s)	109, 343, 347, 403, 856, 1539
BspANI	GGCC	5 cut(s)	184, 215, 346, 1315, 1595
BspCNI	CTCAG	1 cut(s)	1519
BspDI	ATCGAT	1 cut(s)	1097
BspEI	TCCGGA	1 cut(s)	1155
BspFNI	CGCG	2 cut(s)	403, 527
BspLI	GGNNCC	7 cut(s)	500, 501, 811, 1177, 1215, 1216, 1595
BspPI	GGATC	1 cut(s)	1016
BspT104I	TTCGAA	1 cut(s)	1377
BspT107I	GGYRCC	1 cut(s)	1175
BspTNI	GGTCTC	1 cut(s)	816
BsrDI	GCAATG	1 cut(s)	338
BsrGI	TGTACA	1 cut(s)	1083
BsrI	ACTGG	4 cut(s)	286, 921, 1036, 1432
BssECI	CCNNGG	7 cut(s)	216, 831, 884, 1163, 1164, 1382, 1482
BssMI	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
BssT1I	CCWWGG	3 cut(s)	831, 884, 1482
Bst2UI	CCWGG	1 cut(s)	1383
Bst4CI	ACNGT	2 cut(s)	719, 1237
Bst6I	CTCTTC	2 cut(s)	57, 237
BstAPI	GCANNNNNTGC	1 cut(s)	1456
BstAUI	TGTACA	1 cut(s)	1083
BstBI	TTCGAA	1 cut(s)	1377
BstC8I	GCNNGC	3 cut(s)	477, 676, 1061
BstDEI	CTNAG	1 cut(s)	1527
BstENI	CCTNNNNNAGG	3 cut(s)	707, 830, 1085
BstF5I	GGATG	6 cut(s)	61, 327, 519, 1144, 1280, 1535
BstFNI	CGCG	2 cut(s)	403, 527
BstH2I	RGCGCY	1 cut(s)	383
BstHHI	GCGC	4 cut(s)	382, 403, 527, 690
BstKTI	GATC	6 cut(s)	119, 292, 531, 729, 1024, 1258
BstMAI	GTCTC	3 cut(s)	123, 443, 816
BstMBI	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
BstMCI	CGRYCG	4 cut(s)	347, 531, 535, 729
BstMWI	GCNNNNNNNGC	2 cut(s)	407, 1456
BstNI	CCWGG	1 cut(s)	1383
BstNSI	RCATGY	2 cut(s)	1063, 1457
BstSCI	CCNGG	3 cut(s)	1162, 1163, 1381
BstSLI	GKGCMC	3 cut(s)	788, 1180, 1597
BstUI	CGCG	2 cut(s)	403, 527
BstV1I	GCAGC	1 cut(s)	1462
BstX2I	RGATCY	2 cut(s)	1021, 1255
BstXI	CCANNNNNNTGG	1 cut(s)	510
BstYI	RGATCY	2 cut(s)	1021, 1255
BstZI	CGGCCG	1 cut(s)	344
Bsu15I	ATCGAT	1 cut(s)	1097
BsuRI	GGCC	5 cut(s)	184, 215, 346, 1315, 1595
BsuTUI	ATCGAT	1 cut(s)	1097
BtsCI	GGATG	6 cut(s)	61, 327, 519, 1144, 1280, 1535
Cac8I	GCNNGC	3 cut(s)	477, 676, 1061
CciNI	GCGGCCGC	1 cut(s)	344
CfoI	GCGC	4 cut(s)	382, 403, 527, 690
Cfr13I	GGNCC	6 cut(s)	499, 810, 1214, 1314, 1593, 1594
Cfr9I	CCCGGG	1 cut(s)	1163
ClaI	ATCGAT	1 cut(s)	1097
Csp6I	GTAC	3 cut(s)	1084, 1410, 1587
CviAII	CATG	7 cut(s)	71, 308, 662, 789, 1060, 1391, 1454
CviQI	GTAC	3 cut(s)	1084, 1410, 1587
DdeI	CTNAG	1 cut(s)	1527
DpnI	GATC	6 cut(s)	118, 291, 530, 728, 1023, 1257
DpnII	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
DraI	TTTAAA	1 cut(s)	1069
EaeI	YGGCCR	1 cut(s)	344
EagI	CGGCCG	1 cut(s)	344
Eam1104I	CTCTTC	2 cut(s)	57, 237
EarI	CTCTTC	2 cut(s)	57, 237
EclXI	CGGCCG	1 cut(s)	344
Eco130I	CCWWGG	3 cut(s)	831, 884, 1482
Eco147I	AGGCCT	1 cut(s)	184
Eco24I	GRGCYC	1 cut(s)	1597
Eco31I	GGTCTC	1 cut(s)	816
Eco32I	GATATC	1 cut(s)	208
Eco47I	GGWCC	3 cut(s)	499, 810, 1214
Eco47III	AGCGCT	1 cut(s)	381
Eco52I	CGGCCG	1 cut(s)	344
Eco57I	CTGAAG	1 cut(s)	318
Eco88I	CYCGRG	1 cut(s)	1163
EcoNI	CCTNNNNNAGG	3 cut(s)	707, 830, 1085
EcoO109I	RGGNCCY	3 cut(s)	499, 810, 1214
EcoRI	GAATTC	1 cut(s)	393
EcoRII	CCWGG	1 cut(s)	1381
EcoRV	GATATC	1 cut(s)	208
EcoT14I	CCWWGG	3 cut(s)	831, 884, 1482
EcoT22I	ATGCAT	1 cut(s)	327
EcoT38I	GRGCYC	1 cut(s)	1597
ErhI	CCWWGG	3 cut(s)	831, 884, 1482
Esp3I	CGTCTC	1 cut(s)	123
FaeI	CATG	7 cut(s)	74, 311, 665, 792, 1063, 1394, 1457
FalI	AAGNNNNNCTT	4 cut(s)	810, 842, 1202, 1234
FaqI	GGGAC	4 cut(s)	512, 823, 1113, 1227
FatI	CATG	7 cut(s)	70, 307, 661, 788, 1059, 1390, 1453
FblI	GTMKAC	1 cut(s)	1015
Fnu4HI	GCNGC	4 cut(s)	344, 347, 857, 1451
FokI	GGATG	6 cut(s)	68, 334, 526, 1151, 1287, 1522
FriOI	GRGCYC	1 cut(s)	1597
Fsp4HI	GCNGC	4 cut(s)	344, 347, 857, 1451
FspBI	CTAG	5 cut(s)	47, 423, 614, 780, 1542
FspI	TGCGCA	1 cut(s)	689
GlaI	GCGC	4 cut(s)	381, 402, 526, 689
GluI	GCNGC	4 cut(s)	344, 347, 857, 1451
GsuI	CTGGAG	2 cut(s)	303, 938
HaeII	RGCGCY	1 cut(s)	383
HaeIII	GGCC	5 cut(s)	184, 215, 346, 1315, 1595
HapII	CCGG	3 cut(s)	1025, 1156, 1164
HhaI	GCGC	4 cut(s)	382, 403, 527, 690
Hin1II	CATG	7 cut(s)	74, 311, 665, 792, 1063, 1394, 1457
Hin6I	GCGC	4 cut(s)	380, 401, 525, 688
HinP1I	GCGC	4 cut(s)	380, 401, 525, 688
HincII	GTYRAC	1 cut(s)	1188
HindII	GTYRAC	1 cut(s)	1188
HindIII	AAGCTT	1 cut(s)	628
HinfI	GANTC	4 cut(s)	160, 469, 864, 1387
HpaII	CCGG	3 cut(s)	1025, 1156, 1164
HphI	GGTGA	7 cut(s)	411, 478, 529, 1039, 1046, 1241, 1543
Hpy166II	GTNNAC	4 cut(s)	167, 715, 1016, 1188
Hpy188I	TCNGA	8 cut(s)	121, 128, 726, 731, 797, 1474, 1528, 1555
Hpy188III	TCNNGA	5 cut(s)	47, 99, 536, 1156, 1415
Hpy8I	GTNNAC	4 cut(s)	167, 715, 1016, 1188
Hpy99I	CGWCG	1 cut(s)	443
HpyAV	CCTTC	5 cut(s)	312, 937, 1204, 1219, 1412
HpyCH4III	ACNGT	2 cut(s)	719, 1237
HpyCH4IV	ACGT	2 cut(s)	744, 1126
HpyF10VI	GCNNNNNNNGC	2 cut(s)	407, 1456
HpyF3I	CTNAG	1 cut(s)	1527
HpySE526I	ACGT	2 cut(s)	744, 1126
Hsp92II	CATG	7 cut(s)	74, 311, 665, 792, 1063, 1394, 1457
HspAI	GCGC	4 cut(s)	380, 401, 525, 688
KflI	GGGWCCC	2 cut(s)	499, 1214
Kpn2I	TCCGGA	1 cut(s)	1155
Kzo9I	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
LmnI	GCTCC	3 cut(s)	79, 284, 1562
Lsp1109I	GCAGC	1 cut(s)	1462
LweI	GCATC	4 cut(s)	312, 334, 1546, 1574
MaeI	CTAG	5 cut(s)	47, 423, 614, 780, 1542
MaeII	ACGT	2 cut(s)	744, 1126
MaeIII	GTNAC	3 cut(s)	8, 1027, 1531
MalI	GATC	6 cut(s)	118, 291, 530, 728, 1023, 1257
MboI	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
MfeI	CAATTG	1 cut(s)	768
MflI	RGATCY	2 cut(s)	1021, 1255
MhlI	GDGCHC	4 cut(s)	788, 1180, 1461, 1597
MluCI	AATT	8 cut(s)	393, 768, 875, 879, 1107, 1151, 1264, 1320
MlyI	GAGTC	2 cut(s)	169, 873
Mph1103I	ATGCAT	1 cut(s)	327
MroI	TCCGGA	1 cut(s)	1155
MseI	TTAA	7 cut(s)	560, 878, 1068, 1260, 1323, 1349, 1440
MslI	CAYNNNNRTG	2 cut(s)	15, 1002
MspI	CCGG	3 cut(s)	1025, 1156, 1164
MspR9I	CCNGG	3 cut(s)	1164, 1165, 1383
MunI	CAATTG	1 cut(s)	768
MvaI	CCWGG	1 cut(s)	1383
MvnI	CGCG	2 cut(s)	403, 527
MwoI	GCNNNNNNNGC	2 cut(s)	407, 1456
NciI	CCSGG	2 cut(s)	1164, 1165
NdeII	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
NlaIII	CATG	7 cut(s)	74, 311, 665, 792, 1063, 1394, 1457
NlaIV	GGNNCC	7 cut(s)	500, 501, 811, 1177, 1215, 1216, 1595
NmeAIII	GCCGAG	1 cut(s)	241
NmuCI	GTSAC	3 cut(s)	8, 1027, 1531
NotI	GCGGCCGC	1 cut(s)	344
NsbI	TGCGCA	1 cut(s)	689
NsiI	ATGCAT	1 cut(s)	327
NspI	RCATGY	2 cut(s)	1063, 1457
NspV	TTCGAA	1 cut(s)	1377
PaeI	GCATGC	1 cut(s)	1063
PceI	AGGCCT	1 cut(s)	184
PcsI	WCGNNNNNNNCGW	1 cut(s)	1009
PfeI	GAWTC	2 cut(s)	469, 1387
PkrI	GCNGC	4 cut(s)	345, 348, 858, 1452
Ple19I	CGATCG	2 cut(s)	531, 729
PleI	GAGTC	2 cut(s)	168, 872
PpsI	GAGTC	2 cut(s)	168, 872
PpuMI	RGGWCCY	3 cut(s)	499, 810, 1214
PshBI	ATTAAT	1 cut(s)	878
Psp5II	RGGWCCY	3 cut(s)	499, 810, 1214
Psp6I	CCWGG	1 cut(s)	1381
PspGI	CCWGG	1 cut(s)	1381
PspN4I	GGNNCC	7 cut(s)	500, 501, 811, 1177, 1215, 1216, 1595
PspOMI	GGGCCC	1 cut(s)	1593
PspPI	GGNCC	6 cut(s)	499, 810, 1214, 1314, 1593, 1594
PspPPI	RGGWCCY	3 cut(s)	499, 810, 1214
PsrI	GAACNNNNNNTAC	2 cut(s)	705, 737
PsuI	RGATCY	2 cut(s)	1021, 1255
PvuI	CGATCG	2 cut(s)	531, 729
RsaI	GTAC	3 cut(s)	1085, 1411, 1588
RsaNI	GTAC	3 cut(s)	1084, 1410, 1587
RseI	CAYNNNNRTG	2 cut(s)	15, 1002
SaqAI	TTAA	7 cut(s)	560, 878, 1068, 1260, 1323, 1349, 1440
SatI	GCNGC	4 cut(s)	344, 347, 857, 1451
Sau3AI	GATC	6 cut(s)	116, 289, 528, 726, 1021, 1255
Sau96I	GGNCC	6 cut(s)	499, 810, 1214, 1314, 1593, 1594
ScaI	AGTACT	1 cut(s)	1588
SchI	GAGTC	2 cut(s)	169, 873
ScrFI	CCNGG	3 cut(s)	1164, 1165, 1383
SduI	GDGCHC	4 cut(s)	788, 1180, 1461, 1597
SfaNI	GCATC	4 cut(s)	312, 334, 1546, 1574
SfuI	TTCGAA	1 cut(s)	1377
SinI	GGWCC	3 cut(s)	499, 810, 1214
SmaI	CCCGGG	1 cut(s)	1165
SmiMI	CAYNNNNRTG	2 cut(s)	15, 1002
SmlI	CTYRAG	1 cut(s)	383
SmoI	CTYRAG	1 cut(s)	383
SphI	GCATGC	1 cut(s)	1063
Sse9I	AATT	8 cut(s)	393, 768, 875, 879, 1107, 1151, 1264, 1320
SseBI	AGGCCT	1 cut(s)	184
SsiI	CCGC	6 cut(s)	109, 343, 347, 403, 856, 1539
SspI	AATATT	1 cut(s)	976
SspMI	CTAG	5 cut(s)	47, 423, 614, 780, 1542
StuI	AGGCCT	1 cut(s)	184
StyD4I	CCNGG	3 cut(s)	1162, 1163, 1381
StyI	CCWWGG	3 cut(s)	831, 884, 1482
TaaI	ACNGT	2 cut(s)	719, 1237
TaiI	ACGT	2 cut(s)	747, 1129
TaqI	TCGA	5 cut(s)	210, 222, 846, 1097, 1377
TaqII	GACCGA	1 cut(s)	521
TasI	AATT	8 cut(s)	393, 768, 875, 879, 1107, 1151, 1264, 1320
TatI	WGTACW	2 cut(s)	1083, 1586
TauI	GCSGC	3 cut(s)	346, 349, 859
TfiI	GAWTC	2 cut(s)	469, 1387
Tru1I	TTAA	7 cut(s)	560, 878, 1068, 1260, 1323, 1349, 1440
Tru9I	TTAA	7 cut(s)	560, 878, 1068, 1260, 1323, 1349, 1440
TseFI	GTSAC	3 cut(s)	8, 1027, 1531
TseI	GCWGC	1 cut(s)	1450
Tsp45I	GTSAC	3 cut(s)	8, 1027, 1531
TspDTI	ATGAA	9 cut(s)	33, 72, 259, 815, 986, 996, 1115, 1155, 1295
TspGWI	ACGGA	1 cut(s)	184
TspMI	CCCGGG	1 cut(s)	1163
VpaK11BI	GGWCC	3 cut(s)	499, 810, 1214
VspI	ATTAAT	1 cut(s)	878
XagI	CCTNNNNNAGG	3 cut(s)	707, 830, 1085
XapI	RAATTY	3 cut(s)	393, 1151, 1264
XbaI	TCTAGA	1 cut(s)	46
XceI	RCATGY	2 cut(s)	1063, 1457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	47
XmaI	CCCGGG	1 cut(s)	1163
XmiI	GTMKAC	1 cut(s)	1015
XspI	CTAG	5 cut(s)	47, 423, 614, 780, 1542
ZrmI	AGTACT	1 cut(s)	1588
Zsp2I	ATGCAT	1 cut(s)	327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.