Transcription elongation factor SPT5
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08350 |
| fragaria_vesca | FvH4_2g14770 FvH4_2g14770 FvH4_2g14770 FvH4_7g15891 FvH4_7g15900 |
| malus_domestica | MD01G1075900.v1.1 MD05G1013100.v1.1 MD10G1013600.v1.1 |
| prunus_persica | Prupe.2G047200_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1 |
| pyrus_communis | pycom01g10480 pycom05g00760 pycom10g00830 |
| rosa_chinensis | RchiOBHm_Chr1g0358771 RchiOBHm_Chr6g0277331 |
| rosa_laevigata | RLG00000013309 RLG00000015056 RLG00000027924 RLG00000027930 RLG00000027931 |
| rosa_multiflora | Rmu_co8026512.1_g000001 Rmu_sc0000030.1_g000027 Rmu_sc0017529.1_g000003 Rmu_sc0031713.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00297640 Rroxscaffold_7G00191440 |
| rosa_rugosa | Rorug01G0264800 Rorug01G0265100 Rorug06G0107200 |
| rosa_samantha | Rh1AG279200 Rh1BG245800 Rh1CG263000 Rh1DG274100 Rh6BG222000 Rh6DG215000 |
| rosa_wichuraiana | Rw1G024810 Rw6G019000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1520, 1569 |
| AciI | CCGC | 1 cut(s) | 824 |
| AcoI | YGGCCR | 2 cut(s) | 416, 1738 |
| AcsI | RAATTY | 4 cut(s) | 155, 365, 665, 1763 |
| AcuI | CTGAAG | 2 cut(s) | 857, 1062 |
| AcvI | CACGTG | 1 cut(s) | 545 |
| AfaI | GTAC | 4 cut(s) | 234, 398, 513, 519 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 322, 1199, 1520, 1569, 1629, 1909 |
| AgsI | TTSAA | 3 cut(s) | 662, 1250, 1671 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 311 |
| AjnI | CCWGG | 5 cut(s) | 52, 669, 1099, 1393, 1438 |
| Alw26I | GTCTC | 5 cut(s) | 48, 292, 437, 1349, 1725 |
| Ama87I | CYCGRG | 3 cut(s) | 1503, 1552, 1612 |
| AoxI | GGCC | 5 cut(s) | 317, 416, 835, 1738, 1812 |
| ApoI | RAATTY | 4 cut(s) | 155, 365, 665, 1763 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1495 |
| AspS9I | GGNCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| AsuC2I | CCSGG | 1 cut(s) | 842 |
| AsuHPI | GGTGA | 3 cut(s) | 695, 967, 1067 |
| AvaI | CYCGRG | 3 cut(s) | 1503, 1552, 1612 |
| AvaII | GGWCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| AxyI | CCTNAGG | 1 cut(s) | 321 |
| BalI | TGGCCA | 2 cut(s) | 418, 1740 |
| BamHI | GGATCC | 2 cut(s) | 29, 1852 |
| BanII | GRGCYC | 1 cut(s) | 1260 |
| BbrPI | CACGTG | 1 cut(s) | 545 |
| BciT130I | CCWGG | 5 cut(s) | 54, 671, 1101, 1395, 1440 |
| BclI | TGATCA | 3 cut(s) | 955, 972, 1021 |
| BcnI | CCSGG | 1 cut(s) | 842 |
| BcoDI | GTCTC | 5 cut(s) | 48, 292, 437, 1349, 1725 |
| BfaI | CTAG | 5 cut(s) | 291, 303, 1187, 1253, 1713 |
| BfmI | CTRYAG | 4 cut(s) | 81, 297, 1204, 1323 |
| BglII | AGATCT | 1 cut(s) | 763 |
| Bme1390I | CCNGG | 6 cut(s) | 54, 671, 842, 1101, 1395, 1440 |
| Bme18I | GGWCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 311 |
| BmeT110I | CYCGRG | 3 cut(s) | 1503, 1552, 1612 |
| BmgT120I | GGNCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| BmiI | GGNNCC | 6 cut(s) | 31, 1169, 1192, 1644, 1854, 1902 |
| BmrFI | CCNGG | 6 cut(s) | 54, 671, 842, 1101, 1395, 1440 |
| BmsI | GCATC | 5 cut(s) | 57, 394, 730, 979, 1454 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 272, 304, 434, 466, 1631, 1663 |
| BpmI | CTGGAG | 4 cut(s) | 417, 1143, 1416, 1461 |
| BpuEI | CTTGAG | 1 cut(s) | 1808 |
| BpuMI | CCSGG | 1 cut(s) | 842 |
| BsaAI | YACGTR | 1 cut(s) | 545 |
| BsaBI | GATNNNNATC | 1 cut(s) | 690 |
| BsaI | GGTCTC | 3 cut(s) | 292, 437, 1349 |
| BsaJI | CCNNGG | 2 cut(s) | 1099, 1112 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 322, 1199, 1520, 1569, 1629, 1909 |
| Bse1I | ACTGG | 2 cut(s) | 940, 1741 |
| Bse21I | CCTNAGG | 1 cut(s) | 321 |
| Bse3DI | GCAATG | 2 cut(s) | 381, 1888 |
| Bse8I | GATNNNNATC | 1 cut(s) | 690 |
| BseBI | CCWGG | 5 cut(s) | 54, 671, 1101, 1395, 1440 |
| BseDI | CCNNGG | 2 cut(s) | 1099, 1112 |
| BseGI | GGATG | 4 cut(s) | 585, 838, 1156, 1445 |
| BseJI | GATNNNNATC | 1 cut(s) | 690 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 322, 1199, 1520, 1569, 1629, 1909 |
| BseMI | GCAATG | 2 cut(s) | 381, 1888 |
| BseMII | CTCAG | 6 cut(s) | 54, 141, 270, 336, 465, 758 |
| BseNI | ACTGG | 2 cut(s) | 940, 1741 |
| BseRI | GAGGAG | 2 cut(s) | 133, 144 |
| BseYI | CCCAGC | 1 cut(s) | 505 |
| BshFI | GGCC | 5 cut(s) | 319, 418, 837, 1740, 1814 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1503, 1552, 1612 |
| BsiSI | CCGG | 2 cut(s) | 316, 842 |
| BslFI | GGGAC | 4 cut(s) | 795, 820, 1176, 1807 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 322, 1199, 1520, 1569, 1629, 1909 |
| BsmAI | GTCTC | 5 cut(s) | 48, 292, 437, 1349, 1725 |
| BsmFI | GGGAC | 4 cut(s) | 795, 820, 1176, 1807 |
| BsnI | GGCC | 5 cut(s) | 319, 418, 837, 1740, 1814 |
| Bso31I | GGTCTC | 3 cut(s) | 292, 437, 1349 |
| BsoBI | CYCGRG | 3 cut(s) | 1503, 1552, 1612 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1260 |
| Bsp1407I | TGTACA | 1 cut(s) | 232 |
| BspACI | CCGC | 1 cut(s) | 824 |
| BspANI | GGCC | 5 cut(s) | 319, 418, 837, 1740, 1814 |
| BspCNI | CTCAG | 6 cut(s) | 55, 142, 271, 337, 464, 759 |
| BspLI | GGNNCC | 6 cut(s) | 31, 1169, 1192, 1644, 1854, 1902 |
| BspMAI | CTGCAG | 3 cut(s) | 301, 1208, 1327 |
| BspTNI | GGTCTC | 3 cut(s) | 292, 437, 1349 |
| BsrDI | GCAATG | 2 cut(s) | 381, 1888 |
| BsrGI | TGTACA | 1 cut(s) | 232 |
| BsrI | ACTGG | 2 cut(s) | 940, 1741 |
| BssECI | CCNNGG | 2 cut(s) | 1099, 1112 |
| Bst2UI | CCWGG | 5 cut(s) | 54, 671, 1101, 1395, 1440 |
| Bst4CI | ACNGT | 6 cut(s) | 225, 522, 811, 850, 1086, 1897 |
| Bst6I | CTCTTC | 1 cut(s) | 1486 |
| BstAUI | TGTACA | 1 cut(s) | 232 |
| BstBAI | YACGTR | 1 cut(s) | 545 |
| BstC8I | GCNNGC | 1 cut(s) | 12 |
| BstDEI | CTNAG | 8 cut(s) | 63, 108, 150, 279, 321, 345, 451, 767 |
| BstF5I | GGATG | 4 cut(s) | 585, 838, 1156, 1445 |
| BstMAI | GTCTC | 5 cut(s) | 48, 292, 437, 1349, 1725 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1001, 1144 |
| BstNI | CCWGG | 5 cut(s) | 54, 671, 1101, 1395, 1440 |
| BstNSI | RCATGY | 1 cut(s) | 902 |
| BstSCI | CCNGG | 6 cut(s) | 52, 669, 840, 1099, 1393, 1438 |
| BstSFI | CTRYAG | 4 cut(s) | 81, 297, 1204, 1323 |
| BstX2I | RGATCY | 8 cut(s) | 29, 424, 532, 763, 1390, 1435, 1607, 1852 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 184 |
| BstYI | RGATCY | 8 cut(s) | 29, 424, 532, 763, 1390, 1435, 1607, 1852 |
| Bsu36I | CCTNAGG | 1 cut(s) | 321 |
| BsuRI | GGCC | 5 cut(s) | 319, 418, 837, 1740, 1814 |
| BtgZI | GCGATG | 1 cut(s) | 753 |
| BtsCI | GGATG | 4 cut(s) | 585, 838, 1156, 1445 |
| BtsI | GCAGTG | 3 cut(s) | 171, 294, 333 |
| BtsIMutI | CAGTG | 4 cut(s) | 171, 294, 333, 1902 |
| Cac8I | GCNNGC | 1 cut(s) | 12 |
| Cfr13I | GGNCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| Csp6I | GTAC | 4 cut(s) | 233, 397, 512, 518 |
| CviQI | GTAC | 4 cut(s) | 233, 397, 512, 518 |
| DdeI | CTNAG | 8 cut(s) | 63, 108, 150, 279, 321, 345, 451, 767 |
| DraI | TTTAAA | 2 cut(s) | 589, 886 |
| DriI | GACNNNNNGTC | 1 cut(s) | 311 |
| EaeI | YGGCCR | 2 cut(s) | 416, 1738 |
| Eam1104I | CTCTTC | 1 cut(s) | 1486 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 311 |
| EarI | CTCTTC | 1 cut(s) | 1486 |
| Eco147I | AGGCCT | 1 cut(s) | 1814 |
| Eco24I | GRGCYC | 1 cut(s) | 1260 |
| Eco31I | GGTCTC | 3 cut(s) | 292, 437, 1349 |
| Eco47I | GGWCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| Eco57I | CTGAAG | 2 cut(s) | 857, 1062 |
| Eco72I | CACGTG | 1 cut(s) | 545 |
| Eco81I | CCTNAGG | 1 cut(s) | 321 |
| Eco88I | CYCGRG | 3 cut(s) | 1503, 1552, 1612 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1190, 1642 |
| EcoRI | GAATTC | 1 cut(s) | 665 |
| EcoRII | CCWGG | 5 cut(s) | 52, 669, 1099, 1393, 1438 |
| EcoT38I | GRGCYC | 1 cut(s) | 1260 |
| FaqI | GGGAC | 4 cut(s) | 795, 820, 1176, 1807 |
| FauNDI | CATATG | 1 cut(s) | 1726 |
| FbaI | TGATCA | 3 cut(s) | 955, 972, 1021 |
| FokI | GGATG | 4 cut(s) | 592, 845, 1163, 1432 |
| FriOI | GRGCYC | 1 cut(s) | 1260 |
| FspBI | CTAG | 5 cut(s) | 291, 303, 1187, 1253, 1713 |
| GsaI | CCCAGC | 1 cut(s) | 509 |
| GsuI | CTGGAG | 4 cut(s) | 417, 1143, 1416, 1461 |
| HaeIII | GGCC | 5 cut(s) | 319, 418, 837, 1740, 1814 |
| HapII | CCGG | 2 cut(s) | 316, 842 |
| HincII | GTYRAC | 1 cut(s) | 923 |
| HindII | GTYRAC | 1 cut(s) | 923 |
| HindIII | AAGCTT | 1 cut(s) | 724 |
| HpaII | CCGG | 2 cut(s) | 316, 842 |
| HphI | GGTGA | 3 cut(s) | 695, 967, 1067 |
| Hpy166II | GTNNAC | 4 cut(s) | 397, 512, 923, 1900 |
| Hpy188III | TCNNGA | 6 cut(s) | 258, 434, 1040, 1122, 1776, 1856 |
| Hpy8I | GTNNAC | 4 cut(s) | 397, 512, 923, 1900 |
| HpyAV | CCTTC | 7 cut(s) | 318, 388, 727, 884, 898, 1128, 1871 |
| HpyCH4III | ACNGT | 6 cut(s) | 225, 522, 811, 850, 1086, 1897 |
| HpyCH4IV | ACGT | 3 cut(s) | 544, 1403, 1863 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1001, 1144 |
| HpyF3I | CTNAG | 8 cut(s) | 63, 108, 150, 279, 321, 345, 451, 767 |
| HpySE526I | ACGT | 3 cut(s) | 544, 1403, 1863 |
| Ksp22I | TGATCA | 3 cut(s) | 955, 972, 1021 |
| LmnI | GCTCC | 4 cut(s) | 929, 1167, 1397, 1442 |
| LweI | GCATC | 5 cut(s) | 57, 394, 730, 979, 1454 |
| MaeI | CTAG | 5 cut(s) | 291, 303, 1187, 1253, 1713 |
| MaeII | ACGT | 3 cut(s) | 544, 1403, 1863 |
| MaeIII | GTNAC | 3 cut(s) | 751, 1067, 1327 |
| MboII | GAAGA | 5 cut(s) | 113, 434, 571, 674, 1503 |
| MflI | RGATCY | 8 cut(s) | 29, 424, 532, 763, 1390, 1435, 1607, 1852 |
| MhlI | GDGCHC | 1 cut(s) | 1260 |
| MlsI | TGGCCA | 2 cut(s) | 418, 1740 |
| MluCI | AATT | 8 cut(s) | 38, 155, 178, 365, 665, 699, 1763, 1907 |
| MluNI | TGGCCA | 2 cut(s) | 418, 1740 |
| Mox20I | TGGCCA | 2 cut(s) | 418, 1740 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1495 |
| MscI | TGGCCA | 2 cut(s) | 418, 1740 |
| MseI | TTAA | 4 cut(s) | 588, 606, 885, 948 |
| Msp20I | TGGCCA | 2 cut(s) | 418, 1740 |
| MspA1I | CMGCKG | 1 cut(s) | 505 |
| MspI | CCGG | 2 cut(s) | 316, 842 |
| MspR9I | CCNGG | 6 cut(s) | 54, 671, 842, 1101, 1395, 1440 |
| MvaI | CCWGG | 5 cut(s) | 54, 671, 1101, 1395, 1440 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1001, 1144 |
| NciI | CCSGG | 1 cut(s) | 842 |
| NdeI | CATATG | 1 cut(s) | 1726 |
| NlaIV | GGNNCC | 6 cut(s) | 31, 1169, 1192, 1644, 1854, 1902 |
| NmeAIII | GCCGAG | 1 cut(s) | 1196 |
| NmuCI | GTSAC | 1 cut(s) | 1067 |
| NspI | RCATGY | 1 cut(s) | 902 |
| PceI | AGGCCT | 1 cut(s) | 1814 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1495 |
| PfeI | GAWTC | 8 cut(s) | 104, 192, 244, 374, 1304, 1496, 1667, 1772 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1520, 1569 |
| PfoI | TCCNGGA | 5 cut(s) | 52, 669, 840, 1393, 1438 |
| PmaCI | CACGTG | 1 cut(s) | 545 |
| PmlI | CACGTG | 1 cut(s) | 545 |
| Ppu21I | YACGTR | 1 cut(s) | 545 |
| PpuMI | RGGWCCY | 2 cut(s) | 1190, 1642 |
| Psp5II | RGGWCCY | 2 cut(s) | 1190, 1642 |
| Psp6I | CCWGG | 5 cut(s) | 52, 669, 1099, 1393, 1438 |
| PspCI | CACGTG | 1 cut(s) | 545 |
| PspFI | CCCAGC | 1 cut(s) | 505 |
| PspGI | CCWGG | 5 cut(s) | 52, 669, 1099, 1393, 1438 |
| PspN4I | GGNNCC | 6 cut(s) | 31, 1169, 1192, 1644, 1854, 1902 |
| PspPI | GGNCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| PspPPI | RGGWCCY | 2 cut(s) | 1190, 1642 |
| PstI | CTGCAG | 3 cut(s) | 301, 1208, 1327 |
| PsuI | RGATCY | 8 cut(s) | 29, 424, 532, 763, 1390, 1435, 1607, 1852 |
| PvuII | CAGCTG | 1 cut(s) | 505 |
| RsaI | GTAC | 4 cut(s) | 234, 398, 513, 519 |
| RsaNI | GTAC | 4 cut(s) | 233, 397, 512, 518 |
| SaqAI | TTAA | 4 cut(s) | 588, 606, 885, 948 |
| Sau96I | GGNCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| ScrFI | CCNGG | 6 cut(s) | 54, 671, 842, 1101, 1395, 1440 |
| SduI | GDGCHC | 1 cut(s) | 1260 |
| SfaNI | GCATC | 5 cut(s) | 57, 394, 730, 979, 1454 |
| SfcI | CTRYAG | 4 cut(s) | 81, 297, 1204, 1323 |
| SinI | GGWCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| SmlI | CTYRAG | 1 cut(s) | 1787 |
| SmoI | CTYRAG | 1 cut(s) | 1787 |
| Sse9I | AATT | 8 cut(s) | 38, 155, 178, 365, 665, 699, 1763, 1907 |
| SseBI | AGGCCT | 1 cut(s) | 1814 |
| SsiI | CCGC | 1 cut(s) | 824 |
| SspMI | CTAG | 5 cut(s) | 291, 303, 1187, 1253, 1713 |
| StuI | AGGCCT | 1 cut(s) | 1814 |
| StyD4I | CCNGG | 6 cut(s) | 52, 669, 840, 1099, 1393, 1438 |
| TaaI | ACNGT | 6 cut(s) | 225, 522, 811, 850, 1086, 1897 |
| TaiI | ACGT | 3 cut(s) | 547, 1406, 1866 |
| TaqI | TCGA | 3 cut(s) | 271, 402, 1105 |
| TasI | AATT | 8 cut(s) | 38, 155, 178, 365, 665, 699, 1763, 1907 |
| TatI | WGTACW | 2 cut(s) | 232, 517 |
| TfiI | GAWTC | 8 cut(s) | 104, 192, 244, 374, 1304, 1496, 1667, 1772 |
| Tru1I | TTAA | 4 cut(s) | 588, 606, 885, 948 |
| Tru9I | TTAA | 4 cut(s) | 588, 606, 885, 948 |
| TscAI | CASTG | 4 cut(s) | 178, 301, 333, 1902 |
| TseFI | GTSAC | 1 cut(s) | 1067 |
| Tsp45I | GTSAC | 1 cut(s) | 1067 |
| TspGWI | ACGGA | 1 cut(s) | 1172 |
| TspRI | CASTG | 4 cut(s) | 178, 301, 333, 1902 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1520, 1569 |
| VpaK11BI | GGWCC | 5 cut(s) | 458, 1190, 1232, 1642, 1900 |
| XapI | RAATTY | 4 cut(s) | 155, 365, 665, 1763 |
| XceI | RCATGY | 1 cut(s) | 902 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 677 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1495 |
| XspI | CTAG | 5 cut(s) | 291, 303, 1187, 1253, 1713 |