Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0002606

Physical Location & Seq

Genomic Coordinates Reverse (-)

52765371 .. 52768147

Gene Structure 2777 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG263000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGGTTTTGTGTTGCCGGAGGAAGAAGAGGAGGAGGATATTGATGAGTTTGAAAGAAGGGTTCAAGACAGATTTAGGGATGTTCATGTCGAAGAATATGAGGATGATACGGAGGTTGGACAGCAAGCTCTTATACCCGGTGTGAAGGACCCGAAATTGTGGTTGGTCAAGTGTGCCATTGGTAGAGAGAGAGAGGTAGCGGCTTGTCTAATGCAGAAGTGCATTGATAATCCTGGAGAATTGCAGATCATGTCTGCAATTGCTTTGGATCACTTGAAAAGCTTCATATATGTTGAAGCTTACAAAGAAGCCCATGTGAGGGAAGCTTGCAGAGGTCTGAGGTATGTAATTCTGCAGAAAATAATGCTTGTTCCTATTAAAGAGATGATTGATGTGCTATCATGTGAAAGCAATAGCGTTGTAAATGATAAATGGGTTAGGATTAAGACGGGAGTATGTAAAGGGGACCTTGCCAAGATTGTGGGGCATGTCCCGGGGAGACAGCAAGTTAGAGTAAAGTTAATTCCAAGGGTTGATTTACAAGCTCTTGCAAAAGGTGTAGAATCATCGAAGAAGAAGGAATCTGGTGCACGTCCTGATCGTGTTCCTGCACTTCTTAGGAACATGAACCTAGTTAGACAGCTGGGTGTACGAGTACAGTCCATGCGAGATCCATTGGCACGTGGTTATATTGAGAAGATTGATGGCTTATCTGGGATGATCTTTAAAGATGGTTTCCATCTTAAAGTTGTTTCTGATAAAAGTATAAAAGAGGCAAAACCCTCCTTGCAAGAACTTGAAGAATTCCAGGAACTTGATGGTGATGGAGATCATACAATTCCAAATAGAAAGAAAGGCGAAAGCTTTATGAAGGGCGATGCAGTTATTGTTACGGAGGGAGATCTGAGAAACTTGGTGGGACGGGTTGAGAAAGTGGAGTTAGGGACTGTTCATATCAAAGCGGAAATGGATGGCCTCCCGGAAACTGTTGCCATCAATCAAACAGCACTTCAGAAATGCTTTAAAGAAGGGCAGCATGCGAAGGTTGTTAGTGGTAGTCAACAAGGAGCAACTGGCATGGTTGTTAAGGTTGATCAGCAGAAGCAGTTGATCACCATTTTATCTGATGCAGCCAATGAAGCTATCTGCGTGTTCTCTGATCATGTTGTGGAGAGTCCTGAAGTAAATAATGGTGATACAATGTGTGACTCCCACAACTTAAGGTATCACAAAACCCCTGGTCGAAGTCCGAGGTTTTCTGGAGGTGCAAGAAGGCATGATGGGCAGGATGGCTTTGGTAAAGGGAGCCGAGTAAAGTTCCGTCTAGGTCCCTATAAAGGCTGCAGGGGGCGTGTTGTGGAGGTTAAAGGACCAAATGTAAGGGTTGAACTAGAGTCCCAGATGAAAATTATTGTTGTTAATCGTCTGCATTGTATTTCAGAATCAGGTAATGTTGCTGCTGCAGTTACAACACCATATCGCTCTGGTTGTGAGACCCCAATGCCTTACATGAGGACTCCTATGAGAGATCCTGGAGCAACGTCAATGCCTTACATGACAACTCCCATGAGAGATCCTGGAGCATCCCCAATGCAACATGATGGAGTTCATAACAAAGCAGCTTTCTATTTTGTTTTTGTGTGGATTGCTAATAAACAGCAGGGGAGCAGGGCCATAGAAAGAACAAAACGGTGCATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032044 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KOW Spt5-NGN Spt5_N

Protein Analysis

566

Amino Acids

63.17

Weight (kDa)

8.42

Isoelectric Point (pI)

40.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Spt5-NGN	PF03439	52 - 133	3.1e-24	Early transcription elongation factor of RNA pol II, NGN section
KOW1_SPT5	PF23042	141 - 269	4e-26	Transcription elongation factor SPT5, KOW1 domain
KOW2_Spt5	PF23284	291 - 340	3.9e-16	Transcription elongation factor SPT5, second KOW domain
KOW5_SPT5	PF23290	435 - 475	1.1e-11	Transcription elongation factor SPT5, fifth KOW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08350
fragaria_vesca	FvH4_2g14770 FvH4_2g14770 FvH4_2g14770 FvH4_7g15891 FvH4_7g15900
malus_domestica	MD01G1075900.v1.1 MD05G1013100.v1.1 MD10G1013600.v1.1
prunus_persica	Prupe.2G047200_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1
pyrus_communis	pycom01g10480 pycom05g00760 pycom10g00830
rosa_chinensis	RchiOBHm_Chr1g0358771 RchiOBHm_Chr6g0277331
rosa_laevigata	RLG00000013309 RLG00000015056 RLG00000027924 RLG00000027930 RLG00000027931
rosa_multiflora	Rmu_co8026512.1_g000001 Rmu_sc0000030.1_g000027 Rmu_sc0017529.1_g000003 Rmu_sc0031713.1_g000002
rosa_roxburghii	Rroxscaffold_4G00297640 Rroxscaffold_7G00191440
rosa_rugosa	Rorug01G0264800 Rorug01G0265100 Rorug06G0107200
rosa_samantha	Rh1AG279200 Rh1BG245800 Rh1CG263000 Rh1DG274100 Rh6BG222000 Rh6DG215000
rosa_wichuraiana	Rw1G024810 Rw6G019000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	200, 962
AclWI	GGATC	4 cut(s)	276, 665, 1523, 1568
AcsI	RAATTY	1 cut(s)	803
AcuI	CTGAAG	2 cut(s)	995, 1200
AcvI	CACGTG	1 cut(s)	683
AfaI	GTAC	2 cut(s)	651, 657
AfiI	CCNNNNNNNGG	3 cut(s)	318, 319, 1337
AflII	CTTAAG	1 cut(s)	1219
AgsI	TTSAA	6 cut(s)	53, 65, 277, 296, 800, 1388
AjiI	CACGTC	1 cut(s)	593
AjnI	CCWGG	5 cut(s)	232, 807, 1237, 1531, 1576
AjuI	GAANNNNNNNTTGG	2 cut(s)	146, 178
AluBI	AGCT	9 cut(s)	128, 282, 299, 326, 545, 643, 864, 1142, 1622
AluI	AGCT	9 cut(s)	128, 282, 299, 326, 545, 643, 864, 1142, 1622
Alw21I	GWGCWC	1 cut(s)	592
Alw26I	GTCTC	2 cut(s)	493, 1487
Alw44I	GTGCAC	1 cut(s)	588
AlwI	GGATC	4 cut(s)	276, 665, 1523, 1568
Ama87I	CYCGRG	1 cut(s)	493
AoxI	GGCC	2 cut(s)	973, 1671
ApaLI	GTGCAC	1 cut(s)	588
ApeKI	GCWGC	6 cut(s)	1033, 1130, 1341, 1457, 1460, 1619
ApoI	RAATTY	1 cut(s)	803
Asp700I	GAANNNNTTC	1 cut(s)	281
AspS9I	GGNCC	5 cut(s)	148, 466, 1328, 1370, 1671
AsuC2I	CCSGG	4 cut(s)	138, 494, 495, 980
AsuHPI	GGTGA	3 cut(s)	833, 1105, 1205
AvaI	CYCGRG	1 cut(s)	493
AvaII	GGWCC	4 cut(s)	148, 466, 1328, 1370
BaeGI	GKGCMC	1 cut(s)	592
BaeI	ACNNNNGTAYC	2 cut(s)	99, 132
BbrPI	CACGTG	1 cut(s)	683
Bbv12I	GWGCWC	1 cut(s)	592
BbvI	GCAGC	6 cut(s)	1045, 1142, 1328, 1444, 1447, 1631
BciT130I	CCWGG	5 cut(s)	234, 809, 1239, 1533, 1578
BclI	TGATCA	3 cut(s)	1093, 1110, 1159
BcnI	CCSGG	4 cut(s)	138, 494, 495, 980
BcoDI	GTCTC	2 cut(s)	493, 1487
BfaI	CTAG	3 cut(s)	632, 1325, 1391
BfmI	CTRYAG	3 cut(s)	353, 1342, 1461
BfrI	CTTAAG	1 cut(s)	1219
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	7 cut(s)	201, 1034, 1131, 1342, 1458, 1461, 1620
BlsI	GCNGC	7 cut(s)	202, 1035, 1132, 1343, 1459, 1462, 1621
Bme1390I	CCNGG	9 cut(s)	138, 234, 494, 495, 809, 980, 1239, 1533, 1578
Bme18I	GGWCC	4 cut(s)	148, 466, 1328, 1370
BmeT110I	CYCGRG	1 cut(s)	493
BmgBI	CACGTC	1 cut(s)	593
BmgT120I	GGNCC	5 cut(s)	148, 466, 1328, 1370, 1671
BmiI	GGNNCC	4 cut(s)	150, 467, 1307, 1330
BmrFI	CCNGG	9 cut(s)	138, 234, 494, 495, 809, 980, 1239, 1533, 1578
BmsI	GCATC	3 cut(s)	868, 1117, 1592
BpmI	CTGGAG	4 cut(s)	255, 1281, 1554, 1599
BpuMI	CCSGG	4 cut(s)	138, 494, 495, 980
BsaAI	YACGTR	1 cut(s)	683
BsaBI	GATNNNNATC	1 cut(s)	828
BsaI	GGTCTC	1 cut(s)	1487
BsaJI	CCNNGG	5 cut(s)	493, 494, 527, 1237, 1250
Bsc4I	CCNNNNNNNGG	3 cut(s)	318, 319, 1337
Bse1I	ACTGG	1 cut(s)	1078
Bse8I	GATNNNNATC	1 cut(s)	828
BseBI	CCWGG	5 cut(s)	234, 809, 1239, 1533, 1578
BseDI	CCNNGG	5 cut(s)	493, 494, 527, 1237, 1250
BseGI	GGATG	6 cut(s)	85, 109, 723, 976, 1294, 1583
BseJI	GATNNNNATC	1 cut(s)	828
BseLI	CCNNNNNNNGG	3 cut(s)	318, 319, 1337
BseMII	CTCAG	2 cut(s)	329, 896
BseNI	ACTGG	1 cut(s)	1078
BseRI	GAGGAG	2 cut(s)	44, 47
BseSI	GKGCMC	1 cut(s)	592
BseXI	GCAGC	6 cut(s)	1045, 1142, 1328, 1444, 1447, 1631
BseYI	CCCAGC	1 cut(s)	643
BsgI	GTGCAG	1 cut(s)	594
BshFI	GGCC	2 cut(s)	975, 1673
BsiHKAI	GWGCWC	1 cut(s)	592
BsiHKCI	CYCGRG	1 cut(s)	493
BsiSI	CCGG	4 cut(s)	17, 138, 494, 980
BslFI	GGGAC	6 cut(s)	476, 479, 933, 958, 1314, 1381
BslI	CCNNNNNNNGG	3 cut(s)	318, 319, 1337
BsmAI	GTCTC	2 cut(s)	493, 1487
BsmFI	GGGAC	6 cut(s)	476, 479, 933, 958, 1314, 1381
BsnI	GGCC	2 cut(s)	975, 1673
Bso31I	GGTCTC	1 cut(s)	1487
BsoBI	CYCGRG	1 cut(s)	493
Bsp1286I	GDGCHC	1 cut(s)	592
BspACI	CCGC	2 cut(s)	200, 962
BspANI	GGCC	2 cut(s)	975, 1673
BspCNI	CTCAG	2 cut(s)	330, 897
BspLI	GGNNCC	4 cut(s)	150, 467, 1307, 1330
BspMAI	CTGCAG	3 cut(s)	357, 1346, 1465
BspPI	GGATC	4 cut(s)	276, 665, 1523, 1568
BspTI	CTTAAG	1 cut(s)	1219
BspTNI	GGTCTC	1 cut(s)	1487
BsrI	ACTGG	1 cut(s)	1078
BssECI	CCNNGG	5 cut(s)	493, 494, 527, 1237, 1250
BssT1I	CCWWGG	1 cut(s)	527
Bst2UI	CCWGG	5 cut(s)	234, 809, 1239, 1533, 1578
Bst4CI	ACNGT	4 cut(s)	660, 949, 988, 1692
Bst6I	CTCTTC	1 cut(s)	21
BstAFI	CTTAAG	1 cut(s)	1219
BstBAI	YACGTR	1 cut(s)	683
BstC8I	GCNNGC	3 cut(s)	126, 328, 1038
BstDEI	CTNAG	3 cut(s)	338, 617, 905
BstF5I	GGATG	6 cut(s)	85, 109, 723, 976, 1294, 1583
BstMAI	GTCTC	2 cut(s)	493, 1487
BstMWI	GCNNNNNNNGC	2 cut(s)	1139, 1282
BstNI	CCWGG	5 cut(s)	234, 809, 1239, 1533, 1578
BstNSI	RCATGY	2 cut(s)	491, 1040
BstSCI	CCNGG	9 cut(s)	136, 232, 492, 493, 807, 978, 1237, 1531, 1576
BstSFI	CTRYAG	3 cut(s)	353, 1342, 1461
BstSLI	GKGCMC	1 cut(s)	592
BstV1I	GCAGC	6 cut(s)	1045, 1142, 1328, 1444, 1447, 1631
BstX2I	RGATCY	4 cut(s)	670, 901, 1528, 1573
BstXI	CCANNNNNNTGG	1 cut(s)	481
BstYI	RGATCY	4 cut(s)	670, 901, 1528, 1573
BsuRI	GGCC	2 cut(s)	975, 1673
BtgZI	GCGATG	1 cut(s)	891
BtrI	CACGTC	1 cut(s)	593
BtsCI	GGATG	6 cut(s)	85, 109, 723, 976, 1294, 1583
Cac8I	GCNNGC	3 cut(s)	126, 328, 1038
Cfr13I	GGNCC	5 cut(s)	148, 466, 1328, 1370, 1671
Cfr9I	CCCGGG	1 cut(s)	493
Csp6I	GTAC	2 cut(s)	650, 656
CviQI	GTAC	2 cut(s)	650, 656
DdeI	CTNAG	3 cut(s)	338, 617, 905
DraI	TTTAAA	2 cut(s)	727, 1024
Eam1104I	CTCTTC	1 cut(s)	21
EarI	CTCTTC	1 cut(s)	21
Eco130I	CCWWGG	1 cut(s)	527
Eco31I	GGTCTC	1 cut(s)	1487
Eco47I	GGWCC	4 cut(s)	148, 466, 1328, 1370
Eco57I	CTGAAG	2 cut(s)	995, 1200
Eco72I	CACGTG	1 cut(s)	683
Eco88I	CYCGRG	1 cut(s)	493
EcoO109I	RGGNCCY	3 cut(s)	148, 466, 1328
EcoRI	GAATTC	1 cut(s)	803
EcoRII	CCWGG	5 cut(s)	232, 807, 1237, 1531, 1576
EcoT14I	CCWWGG	1 cut(s)	527
ErhI	CCWWGG	1 cut(s)	527
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	6 cut(s)	476, 479, 933, 958, 1314, 1381
FbaI	TGATCA	3 cut(s)	1093, 1110, 1159
Fnu4HI	GCNGC	7 cut(s)	201, 1034, 1131, 1342, 1458, 1461, 1620
FokI	GGATG	6 cut(s)	92, 116, 730, 983, 1301, 1570
Fsp4HI	GCNGC	7 cut(s)	201, 1034, 1131, 1342, 1458, 1461, 1620
FspBI	CTAG	3 cut(s)	632, 1325, 1391
GluI	GCNGC	7 cut(s)	201, 1034, 1131, 1342, 1458, 1461, 1620
GsaI	CCCAGC	1 cut(s)	647
GsuI	CTGGAG	4 cut(s)	255, 1281, 1554, 1599
HaeIII	GGCC	2 cut(s)	975, 1673
HapII	CCGG	4 cut(s)	17, 138, 494, 980
HincII	GTYRAC	1 cut(s)	1061
HindII	GTYRAC	1 cut(s)	1061
HindIII	AAGCTT	4 cut(s)	280, 297, 324, 862
HinfI	GANTC	7 cut(s)	563, 581, 1174, 1208, 1394, 1442, 1516
HpaII	CCGG	4 cut(s)	17, 138, 494, 980
HphI	GGTGA	3 cut(s)	833, 1105, 1205
Hpy166II	GTNNAC	3 cut(s)	590, 650, 1061
Hpy188I	TCNGA	8 cut(s)	339, 757, 906, 1014, 1126, 1159, 1251, 1441
Hpy188III	TCNNGA	4 cut(s)	65, 596, 1178, 1260
Hpy8I	GTNNAC	3 cut(s)	590, 650, 1061
HpyAV	CCTTC	7 cut(s)	51, 139, 571, 865, 1022, 1036, 1266
HpyCH4III	ACNGT	4 cut(s)	660, 949, 988, 1692
HpyCH4IV	ACGT	3 cut(s)	592, 682, 1541
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1139, 1282
HpyF3I	CTNAG	3 cut(s)	338, 617, 905
HpySE526I	ACGT	3 cut(s)	592, 682, 1541
Ksp22I	TGATCA	3 cut(s)	1093, 1110, 1159
LmnI	GCTCC	5 cut(s)	1067, 1305, 1535, 1580, 1665
Lsp1109I	GCAGC	6 cut(s)	1045, 1142, 1328, 1444, 1447, 1631
LweI	GCATC	3 cut(s)	868, 1117, 1592
MaeI	CTAG	3 cut(s)	632, 1325, 1391
MaeII	ACGT	3 cut(s)	592, 682, 1541
MaeIII	GTNAC	3 cut(s)	889, 1205, 1465
MboII	GAAGA	7 cut(s)	35, 38, 104, 583, 586, 709, 812
MfeI	CAATTG	1 cut(s)	258
MflI	RGATCY	4 cut(s)	670, 901, 1528, 1573
MhlI	GDGCHC	1 cut(s)	592
MluCI	AATT	8 cut(s)	155, 239, 258, 348, 522, 803, 837, 1407
MlyI	GAGTC	4 cut(s)	1183, 1202, 1403, 1510
MmeI	TCCRAC	1 cut(s)	97
MroXI	GAANNNNTTC	1 cut(s)	281
MspA1I	CMGCKG	1 cut(s)	643
MspCI	CTTAAG	1 cut(s)	1219
MspI	CCGG	4 cut(s)	17, 138, 494, 980
MspR9I	CCNGG	9 cut(s)	138, 234, 494, 495, 809, 980, 1239, 1533, 1578
MunI	CAATTG	1 cut(s)	258
MvaI	CCWGG	5 cut(s)	234, 809, 1239, 1533, 1578
MwoI	GCNNNNNNNGC	2 cut(s)	1139, 1282
NciI	CCSGG	4 cut(s)	138, 494, 495, 980
NlaIV	GGNNCC	4 cut(s)	150, 467, 1307, 1330
NmeAIII	GCCGAG	1 cut(s)	1334
NmuCI	GTSAC	1 cut(s)	1205
NspI	RCATGY	2 cut(s)	491, 1040
PaeI	GCATGC	1 cut(s)	1040
PcsI	WCGNNNNNNNCGW	1 cut(s)	598
PdmI	GAANNNNTTC	1 cut(s)	281
PfeI	GAWTC	3 cut(s)	563, 581, 1442
PfoI	TCCNGGA	5 cut(s)	232, 807, 978, 1531, 1576
PkrI	GCNGC	7 cut(s)	202, 1035, 1132, 1343, 1459, 1462, 1621
PleI	GAGTC	4 cut(s)	1182, 1202, 1402, 1510
PmaCI	CACGTG	1 cut(s)	683
PmlI	CACGTG	1 cut(s)	683
PpsI	GAGTC	4 cut(s)	1182, 1202, 1402, 1510
Ppu21I	YACGTR	1 cut(s)	683
PpuMI	RGGWCCY	3 cut(s)	148, 466, 1328
Psp5II	RGGWCCY	3 cut(s)	148, 466, 1328
Psp6I	CCWGG	5 cut(s)	232, 807, 1237, 1531, 1576
PspCI	CACGTG	1 cut(s)	683
PspFI	CCCAGC	1 cut(s)	643
PspGI	CCWGG	5 cut(s)	232, 807, 1237, 1531, 1576
PspN4I	GGNNCC	4 cut(s)	150, 467, 1307, 1330
PspPI	GGNCC	5 cut(s)	148, 466, 1328, 1370, 1671
PspPPI	RGGWCCY	3 cut(s)	148, 466, 1328
PstI	CTGCAG	3 cut(s)	357, 1346, 1465
PsuI	RGATCY	4 cut(s)	670, 901, 1528, 1573
PvuII	CAGCTG	1 cut(s)	643
RsaI	GTAC	2 cut(s)	651, 657
RsaNI	GTAC	2 cut(s)	650, 656
SatI	GCNGC	7 cut(s)	201, 1034, 1131, 1342, 1458, 1461, 1620
Sau96I	GGNCC	5 cut(s)	148, 466, 1328, 1370, 1671
SchI	GAGTC	4 cut(s)	1183, 1202, 1403, 1510
ScrFI	CCNGG	9 cut(s)	138, 234, 494, 495, 809, 980, 1239, 1533, 1578
SduI	GDGCHC	1 cut(s)	592
SfaNI	GCATC	3 cut(s)	868, 1117, 1592
SfcI	CTRYAG	3 cut(s)	353, 1342, 1461
SinI	GGWCC	4 cut(s)	148, 466, 1328, 1370
SmaI	CCCGGG	1 cut(s)	495
SmlI	CTYRAG	1 cut(s)	1219
SmoI	CTYRAG	1 cut(s)	1219
SphI	GCATGC	1 cut(s)	1040
Sse9I	AATT	8 cut(s)	155, 239, 258, 348, 522, 803, 837, 1407
SsiI	CCGC	2 cut(s)	200, 962
SspMI	CTAG	3 cut(s)	632, 1325, 1391
StyD4I	CCNGG	9 cut(s)	136, 232, 492, 493, 807, 978, 1237, 1531, 1576
StyI	CCWWGG	1 cut(s)	527
TaaI	ACNGT	4 cut(s)	660, 949, 988, 1692
TaiI	ACGT	3 cut(s)	595, 685, 1544
TaqI	TCGA	3 cut(s)	90, 569, 1243
TasI	AATT	8 cut(s)	155, 239, 258, 348, 522, 803, 837, 1407
TatI	WGTACW	1 cut(s)	655
TauI	GCSGC	1 cut(s)	203
TfiI	GAWTC	3 cut(s)	563, 581, 1442
TseFI	GTSAC	1 cut(s)	1205
TseI	GCWGC	6 cut(s)	1033, 1130, 1341, 1457, 1460, 1619
Tsp45I	GTSAC	1 cut(s)	1205
TspDTI	ATGAA	8 cut(s)	74, 274, 641, 884, 941, 1152, 1418, 1598
TspGWI	ACGGA	3 cut(s)	125, 908, 1310
TspMI	CCCGGG	1 cut(s)	493
Vha464I	CTTAAG	1 cut(s)	1219
VneI	GTGCAC	1 cut(s)	588
VpaK11BI	GGWCC	4 cut(s)	148, 466, 1328, 1370
XapI	RAATTY	1 cut(s)	803
XceI	RCATGY	2 cut(s)	491, 1040
XcmI	CCANNNNNNNNNTGG	1 cut(s)	815
XmaI	CCCGGG	1 cut(s)	493
XmnI	GAANNNNTTC	1 cut(s)	281
XspI	CTAG	3 cut(s)	632, 1325, 1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.