Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0002606

Physical Location & Seq

Genomic Coordinates Reverse (-)

50779060 .. 50782410

Gene Structure 3351 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG279200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGCCAAATCGGAGAGAGGATTATGAAGAAGAAGAGGACAGCGAGATGCGGGAGGAGCGAAGGGCCAATTCGAAGCGGGGGAGATTGAATTCTGATGAGATTGAGATCCAGAAGCGGAGAGGGCGAGGGTCGAATTCGAAAAAGAGGAAATTGAAATCGGTTGCGGAGGAGGAGGAGGAAGAAGAAGAAGGCGGTGGTGGAAGGCCTTTTAAGTCGGTGTTTGTGGATGATGAGGCTATAGAGGATGAAGATGAAGATGAGGAGGAAGACGATGATGGTGAATTGGATGGGTTTATTGTTAATGAACCGGAGTTTGATAACGAACCTGATGAAGTTGAACATGATGGCGGCGGCGGGAGAAGGATGGGGTTTGTCTTGCCGGAGGAAGAAGAGGAGGAAGATATTGATGAGTTTGAAAGAAGGGTTCAAGACAGATTTAGGGATGTTCATGTGGAAGAATATGAGGATGATACGGAGGTTGGACAGCAAGCTCTCATACCCGGTGTGAAGGACCCGAAATTGTGGTTGGTGAAGTGTGCCATTGGTAAAGAGAGAGAGGTAGCGGCTTGTCTAATGCAGAAGTGTATTGATAGTCCTGGAGAATTGCAGATCATGTCTGCCATTGCTTTGGATCACTTGAAAAGTTTCATATATGTTGAAGCTTACAAAGAAGCCCATGTGAGGGAAGCTTGCAAAGGTCTGAGGTATGTAATTCTGCAGAAAATAATGCTTGTTCCTATTAAAGAGATGATTGATGTGCTATCATGTGAAAGCAAGAGCGTTGTAAATGATAAATGGGTTAGGATTAAGACGGGAGTATATAAAGGGGACCTTGCCAAGGTTGTGGGGCATGTCCCGGGGAGACAGCAAGTTAGAGTAAAGTTAATTCCAAGGGTTGATTTACAAGCTCTTGCAAAAGGTGCAGAATCATCGAAGAAGAAGGAATCTGGTGCACGTCCTGATCGTGTTCCTGCACTTCTTAGGAACATGAACCTAGTTAGACAGCTGGGTGTACGAGTACAGTCCATGCGAGATTCATTGGCACGTGGTTATATTGAGAAGATTGATGGCTTATCTGGGATGATCTTTAAAGATGGTTTCCATCTTAAAGTTGTTTCTGATAAAAGTATAAAAGAGGCAAAACCCTCCTTGCAAGAACTTGAAGAATTCCAGGAACTTGATGGTGATGGAGATCATACAATTCCAAATAGAAAGAAAGGCGAAAGCTTTATGAAGGGCGATGCAGTTATTGTTACGGAGGGAGATCTGAGAAACTTGGTGGGACGGGTTGAGAAAGTGGAGTTAGGGACTGTTCATATCAAAGCGGAAATGGATGGCCTCCCGGAAACTGTTGCCATCAATCAAACAGCACTTCAGAAATGCTTTAAAGAAGGGCAGCATGTGAAGGTTGTTAGTGGTAGTCAACAAGGAGCAACTGGCATGGTTGTTAAGGTTGATCAGCAGAAGCAGTTGATCACCATTTTATCTGATGCAGCCAATGAAGCTATCTGCGTGTTCTCTGATCATGTTGTGGAGAGTCCTGAAGTAAATAATGGTGATACAATGTGTGACTCCCACAACTTAAGGTATCACAAAACCCCTGGTCGAAGTCCGAGGTTTTCTGGAGGTGCAAGAAGGCATGATGGGCAGGATGGCTTTGGTAAAGGGAGCCGAGTAAAGTTCCGTCTAGGTCCCTATAAAGGCTGCAGGGGGCGTGTTGTGGAGGTTAGAGGATCAAATGTAAGGGTTGAACTAGAGTCCCAGATGAAAACTATTGTTGTTGATCGTCTGCATTGTATTTCAGAATCAGGTAATGTTGCTGCTGCAGTTACAACACCATATCGCTCTGGTTGTGAGACCCCAATGCCTTACATGAGGACTCCTATGAGAGATCCTGTAGCAACGTCAATGCCTTACATGACAACTCCCATGAGAGATCCTGGAGCATCCCCAATGCGTTATATGACGACTCCCTACATGATGACTCCCAGAAGAGATTCCCCCCGAGCAACACCAATACATGGTGGCATGAGAACTCCACCTATGACTCCCATGAGAGATCCCCGAGCAACACCGATACATGGTGGCATGAGGACCCCTCCTATATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032044 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KOW Spt5-NGN Spt5_N

Protein Analysis

703

Amino Acids

78.94

Weight (kDa)

5.58

Isoelectric Point (pI)

51.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Spt5-NGN	PF03439	173 - 254	2.3e-24	Early transcription elongation factor of RNA pol II, NGN section
KOW1_SPT5	PF23042	262 - 390	7.9e-28	Transcription elongation factor SPT5, KOW1 domain
KOW2_Spt5	PF23284	412 - 461	5.1e-16	Transcription elongation factor SPT5, second KOW domain
KOW5_SPT5	PF23290	556 - 596	2.6e-12	Transcription elongation factor SPT5, fifth KOW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08350
fragaria_vesca	FvH4_2g14770 FvH4_2g14770 FvH4_2g14770 FvH4_7g15891 FvH4_7g15900
malus_domestica	MD01G1075900.v1.1 MD05G1013100.v1.1 MD10G1013600.v1.1
prunus_persica	Prupe.2G047200_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1
pyrus_communis	pycom01g10480 pycom05g00760 pycom10g00830
rosa_chinensis	RchiOBHm_Chr1g0358771 RchiOBHm_Chr6g0277331
rosa_laevigata	RLG00000013309 RLG00000015056 RLG00000027924 RLG00000027930 RLG00000027931
rosa_multiflora	Rmu_co8026512.1_g000001 Rmu_sc0000030.1_g000027 Rmu_sc0017529.1_g000003 Rmu_sc0031713.1_g000002
rosa_roxburghii	Rroxscaffold_4G00297640 Rroxscaffold_7G00191440
rosa_rugosa	Rorug01G0264800 Rorug01G0265100 Rorug06G0107200
rosa_samantha	Rh1AG279200 Rh1BG245800 Rh1CG263000 Rh1DG274100 Rh6BG222000 Rh6DG215000
rosa_wichuraiana	Rw1G024810 Rw6G019000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2021
AclWI	GGATC	6 cut(s)	100, 639, 1741, 1886, 1931, 2054
AcsI	RAATTY	3 cut(s)	88, 133, 1166
AcuI	CTGAAG	2 cut(s)	1358, 1563
AcvI	CACGTG	1 cut(s)	1046
AfaI	GTAC	2 cut(s)	1014, 1020
AfiI	CCNNNNNNNGG	6 cut(s)	681, 682, 838, 1700, 2021, 2081
AflII	CTTAAG	1 cut(s)	1582
AgsI	TTSAA	9 cut(s)	88, 154, 338, 416, 428, 640, 659, 1163, 1751
AjiI	CACGTC	1 cut(s)	956
AjnI	CCWGG	4 cut(s)	595, 1170, 1600, 1939
AjuI	GAANNNNNNNTTGG	2 cut(s)	509, 541
AluBI	AGCT	7 cut(s)	491, 662, 689, 908, 1006, 1227, 1505
AluI	AGCT	7 cut(s)	491, 662, 689, 908, 1006, 1227, 1505
Alw21I	GWGCWC	1 cut(s)	955
Alw26I	GTCTC	2 cut(s)	856, 1850
Alw44I	GTGCAC	1 cut(s)	951
AlwI	GGATC	6 cut(s)	100, 639, 1741, 1886, 1931, 2054
Ama87I	CYCGRG	3 cut(s)	856, 2004, 2064
AoxI	GGCC	3 cut(s)	63, 203, 1336
ApaLI	GTGCAC	1 cut(s)	951
ApeKI	GCWGC	5 cut(s)	1396, 1493, 1704, 1820, 1823
ApoI	RAATTY	3 cut(s)	88, 133, 1166
Asp700I	GAANNNNTTC	2 cut(s)	644, 1996
AspS9I	GGNCC	5 cut(s)	63, 511, 829, 1691, 2094
AsuC2I	CCSGG	4 cut(s)	501, 857, 858, 1343
AsuHPI	GGTGA	5 cut(s)	290, 541, 1196, 1468, 1568
AsuII	TTCGAA	2 cut(s)	71, 137
AvaI	CYCGRG	3 cut(s)	856, 2004, 2064
AvaII	GGWCC	4 cut(s)	511, 829, 1691, 2094
BaeGI	GKGCMC	1 cut(s)	955
BaeI	ACNNNNGTAYC	2 cut(s)	462, 495
BbrPI	CACGTG	1 cut(s)	1046
BbsI	GAAGAC	1 cut(s)	273
Bbv12I	GWGCWC	1 cut(s)	955
BbvI	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
BcgI	CGANNNNNNTGC	2 cut(s)	912, 946
BciT130I	CCWGG	4 cut(s)	597, 1172, 1602, 1941
BclI	TGATCA	3 cut(s)	1456, 1473, 1522
BcnI	CCSGG	4 cut(s)	501, 857, 858, 1343
BcoDI	GTCTC	2 cut(s)	856, 1850
BfaI	CTAG	3 cut(s)	995, 1688, 1754
BfmI	CTRYAG	5 cut(s)	237, 716, 1705, 1824, 1896
BfrI	CTTAAG	1 cut(s)	1582
BglII	AGATCT	1 cut(s)	1264
BisI	GCNGC	8 cut(s)	349, 352, 564, 1397, 1494, 1705, 1821, 1824
BlsI	GCNGC	8 cut(s)	350, 353, 565, 1398, 1495, 1706, 1822, 1825
Bme1390I	CCNGG	8 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1941
Bme18I	GGWCC	4 cut(s)	511, 829, 1691, 2094
BmeT110I	CYCGRG	3 cut(s)	856, 2004, 2064
BmgBI	CACGTC	1 cut(s)	956
BmgT120I	GGNCC	5 cut(s)	63, 511, 829, 1691, 2094
BmiI	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
BmrFI	CCNGG	8 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1941
BmsI	GCATC	4 cut(s)	36, 1231, 1480, 1955
BpiI	GAAGAC	1 cut(s)	273
BplI	GAGNNNNNCTC	1 cut(s)	2083
BpmI	CTGGAG	3 cut(s)	618, 1644, 1962
Bpu14I	TTCGAA	2 cut(s)	71, 137
BpuMI	CCSGG	4 cut(s)	501, 857, 858, 1343
BsaAI	YACGTR	1 cut(s)	1046
BsaBI	GATNNNNATC	2 cut(s)	104, 1191
BsaI	GGTCTC	1 cut(s)	1850
BsaJI	CCNNGG	6 cut(s)	837, 856, 857, 890, 1600, 1613
BsaWI	WCCGGW	1 cut(s)	307
Bsc4I	CCNNNNNNNGG	6 cut(s)	681, 682, 838, 1700, 2021, 2081
Bse1I	ACTGG	1 cut(s)	1441
Bse3DI	GCAATG	1 cut(s)	621
Bse8I	GATNNNNATC	2 cut(s)	104, 1191
BseBI	CCWGG	4 cut(s)	597, 1172, 1602, 1941
BseDI	CCNNGG	6 cut(s)	837, 856, 857, 890, 1600, 1613
BseJI	GATNNNNATC	2 cut(s)	104, 1191
BseLI	CCNNNNNNNGG	6 cut(s)	681, 682, 838, 1700, 2021, 2081
BseMI	GCAATG	1 cut(s)	621
BseMII	CTCAG	2 cut(s)	692, 1259
BseNI	ACTGG	1 cut(s)	1441
BseRI	GAGGAG	6 cut(s)	68, 182, 185, 188, 275, 407
BseSI	GKGCMC	1 cut(s)	955
BseXI	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
BseYI	CCCAGC	1 cut(s)	1006
BsgI	GTGCAG	2 cut(s)	942, 957
BshFI	GGCC	3 cut(s)	65, 205, 1338
BsiHKAI	GWGCWC	1 cut(s)	955
BsiHKCI	CYCGRG	3 cut(s)	856, 2004, 2064
BsiSI	CCGG	5 cut(s)	308, 380, 501, 857, 1343
BslFI	GGGAC	6 cut(s)	839, 842, 1296, 1321, 1677, 1744
BslI	CCNNNNNNNGG	6 cut(s)	681, 682, 838, 1700, 2021, 2081
BsmAI	GTCTC	2 cut(s)	856, 1850
BsmFI	GGGAC	6 cut(s)	839, 842, 1296, 1321, 1677, 1744
BsnI	GGCC	3 cut(s)	65, 205, 1338
Bso31I	GGTCTC	1 cut(s)	1850
BsoBI	CYCGRG	3 cut(s)	856, 2004, 2064
Bsp119I	TTCGAA	2 cut(s)	71, 137
Bsp1286I	GDGCHC	1 cut(s)	955
BspANI	GGCC	3 cut(s)	65, 205, 1338
BspCNI	CTCAG	2 cut(s)	693, 1260
BspLI	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
BspMAI	CTGCAG	3 cut(s)	720, 1709, 1828
BspPI	GGATC	6 cut(s)	100, 639, 1741, 1886, 1931, 2054
BspT104I	TTCGAA	2 cut(s)	71, 137
BspTI	CTTAAG	1 cut(s)	1582
BspTNI	GGTCTC	1 cut(s)	1850
BsrDI	GCAATG	1 cut(s)	621
BsrI	ACTGG	1 cut(s)	1441
BssECI	CCNNGG	6 cut(s)	837, 856, 857, 890, 1600, 1613
BssT1I	CCWWGG	2 cut(s)	837, 890
Bst2UI	CCWGG	4 cut(s)	597, 1172, 1602, 1941
Bst4CI	ACNGT	3 cut(s)	1023, 1312, 1351
Bst6I	CTCTTC	3 cut(s)	27, 384, 1987
BstAFI	CTTAAG	1 cut(s)	1582
BstAPI	GCANNNNNTGC	1 cut(s)	920
BstBAI	YACGTR	1 cut(s)	1046
BstBI	TTCGAA	2 cut(s)	71, 137
BstC8I	GCNNGC	2 cut(s)	489, 691
BstDEI	CTNAG	3 cut(s)	701, 980, 1268
BstENI	CCTNNNNNAGG	1 cut(s)	836
BstMAI	GTCTC	2 cut(s)	856, 1850
BstMWI	GCNNNNNNNGC	5 cut(s)	55, 121, 920, 1502, 1645
BstNI	CCWGG	4 cut(s)	597, 1172, 1602, 1941
BstNSI	RCATGY	2 cut(s)	854, 1403
BstSCI	CCNGG	8 cut(s)	499, 595, 855, 856, 1170, 1341, 1600, 1939
BstSFI	CTRYAG	5 cut(s)	237, 716, 1705, 1824, 1896
BstSLI	GKGCMC	1 cut(s)	955
BstV1I	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
BstV2I	GAAGAC	1 cut(s)	273
BstX2I	RGATCY	5 cut(s)	105, 1264, 1891, 1936, 2059
BstXI	CCANNNNNNTGG	2 cut(s)	628, 844
BstYI	RGATCY	5 cut(s)	105, 1264, 1891, 1936, 2059
BsuRI	GGCC	3 cut(s)	65, 205, 1338
BtgZI	GCGATG	1 cut(s)	1254
BtrI	CACGTC	1 cut(s)	956
Cac8I	GCNNGC	2 cut(s)	489, 691
Cfr13I	GGNCC	5 cut(s)	63, 511, 829, 1691, 2094
Cfr9I	CCCGGG	1 cut(s)	856
Csp6I	GTAC	2 cut(s)	1013, 1019
CviQI	GTAC	2 cut(s)	1013, 1019
DdeI	CTNAG	3 cut(s)	701, 980, 1268
DraI	TTTAAA	2 cut(s)	1090, 1387
Eam1104I	CTCTTC	3 cut(s)	27, 384, 1987
EarI	CTCTTC	3 cut(s)	27, 384, 1987
Eco130I	CCWWGG	2 cut(s)	837, 890
Eco147I	AGGCCT	1 cut(s)	205
Eco31I	GGTCTC	1 cut(s)	1850
Eco47I	GGWCC	4 cut(s)	511, 829, 1691, 2094
Eco57I	CTGAAG	2 cut(s)	1358, 1563
Eco72I	CACGTG	1 cut(s)	1046
Eco88I	CYCGRG	3 cut(s)	856, 2004, 2064
EcoNI	CCTNNNNNAGG	1 cut(s)	836
EcoO109I	RGGNCCY	4 cut(s)	511, 829, 1691, 2094
EcoRI	GAATTC	3 cut(s)	88, 133, 1166
EcoRII	CCWGG	4 cut(s)	595, 1170, 1600, 1939
EcoT14I	CCWWGG	2 cut(s)	837, 890
ErhI	CCWWGG	2 cut(s)	837, 890
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FaqI	GGGAC	6 cut(s)	839, 842, 1296, 1321, 1677, 1744
FauI	CCCGC	3 cut(s)	42, 69, 347
FbaI	TGATCA	3 cut(s)	1456, 1473, 1522
Fnu4HI	GCNGC	8 cut(s)	349, 352, 564, 1397, 1494, 1705, 1821, 1824
Fsp4HI	GCNGC	8 cut(s)	349, 352, 564, 1397, 1494, 1705, 1821, 1824
FspBI	CTAG	3 cut(s)	995, 1688, 1754
GluI	GCNGC	8 cut(s)	349, 352, 564, 1397, 1494, 1705, 1821, 1824
GsaI	CCCAGC	1 cut(s)	1010
GsuI	CTGGAG	3 cut(s)	618, 1644, 1962
HaeIII	GGCC	3 cut(s)	65, 205, 1338
HapII	CCGG	5 cut(s)	308, 380, 501, 857, 1343
HincII	GTYRAC	1 cut(s)	1424
HindII	GTYRAC	1 cut(s)	1424
HindIII	AAGCTT	3 cut(s)	660, 687, 1225
HpaII	CCGG	5 cut(s)	308, 380, 501, 857, 1343
HphI	GGTGA	5 cut(s)	290, 541, 1196, 1468, 1568
Hpy166II	GTNNAC	3 cut(s)	953, 1013, 1424
Hpy188III	TCNNGA	5 cut(s)	109, 428, 959, 1541, 1623
Hpy8I	GTNNAC	3 cut(s)	953, 1013, 1424
HpyCH4III	ACNGT	3 cut(s)	1023, 1312, 1351
HpyCH4IV	ACGT	3 cut(s)	955, 1045, 1904
HpyF10VI	GCNNNNNNNGC	5 cut(s)	55, 121, 920, 1502, 1645
HpyF3I	CTNAG	3 cut(s)	701, 980, 1268
HpySE526I	ACGT	3 cut(s)	955, 1045, 1904
Ksp22I	TGATCA	3 cut(s)	1456, 1473, 1522
LmnI	GCTCC	4 cut(s)	55, 1430, 1668, 1943
Lsp1109I	GCAGC	5 cut(s)	1408, 1505, 1691, 1807, 1810
LweI	GCATC	4 cut(s)	36, 1231, 1480, 1955
MaeI	CTAG	3 cut(s)	995, 1688, 1754
MaeII	ACGT	3 cut(s)	955, 1045, 1904
MaeIII	GTNAC	3 cut(s)	1252, 1568, 1828
MflI	RGATCY	5 cut(s)	105, 1264, 1891, 1936, 2059
MhlI	GDGCHC	1 cut(s)	955
MlyI	GAGTC	7 cut(s)	1546, 1565, 1766, 1873, 1963, 1978, 2041
MmeI	TCCRAC	1 cut(s)	460
MroXI	GAANNNNTTC	2 cut(s)	644, 1996
MspA1I	CMGCKG	1 cut(s)	1006
MspCI	CTTAAG	1 cut(s)	1582
MspI	CCGG	5 cut(s)	308, 380, 501, 857, 1343
MspR9I	CCNGG	8 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1941
MvaI	CCWGG	4 cut(s)	597, 1172, 1602, 1941
MwoI	GCNNNNNNNGC	5 cut(s)	55, 121, 920, 1502, 1645
NciI	CCSGG	4 cut(s)	501, 857, 858, 1343
NlaIV	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
NmeAIII	GCCGAG	1 cut(s)	1697
NmuCI	GTSAC	1 cut(s)	1568
NspI	RCATGY	2 cut(s)	854, 1403
NspV	TTCGAA	2 cut(s)	71, 137
PceI	AGGCCT	1 cut(s)	205
PcsI	WCGNNNNNNNCGW	1 cut(s)	961
PdmI	GAANNNNTTC	2 cut(s)	644, 1996
PfeI	GAWTC	5 cut(s)	926, 944, 1034, 1805, 1997
PflMI	CCANNNNNTGG	1 cut(s)	2021
PfoI	TCCNGGA	4 cut(s)	595, 1170, 1341, 1939
PkrI	GCNGC	8 cut(s)	350, 353, 565, 1398, 1495, 1706, 1822, 1825
PleI	GAGTC	7 cut(s)	1545, 1565, 1765, 1873, 1963, 1978, 2041
PmaCI	CACGTG	1 cut(s)	1046
PmlI	CACGTG	1 cut(s)	1046
PpsI	GAGTC	7 cut(s)	1545, 1565, 1765, 1873, 1963, 1978, 2041
Ppu21I	YACGTR	1 cut(s)	1046
PpuMI	RGGWCCY	4 cut(s)	511, 829, 1691, 2094
Psp5II	RGGWCCY	4 cut(s)	511, 829, 1691, 2094
Psp6I	CCWGG	4 cut(s)	595, 1170, 1600, 1939
PspCI	CACGTG	1 cut(s)	1046
PspFI	CCCAGC	1 cut(s)	1006
PspGI	CCWGG	4 cut(s)	595, 1170, 1600, 1939
PspN4I	GGNNCC	5 cut(s)	513, 830, 1670, 1693, 2096
PspPI	GGNCC	5 cut(s)	63, 511, 829, 1691, 2094
PspPPI	RGGWCCY	4 cut(s)	511, 829, 1691, 2094
PstI	CTGCAG	3 cut(s)	720, 1709, 1828
PsuI	RGATCY	5 cut(s)	105, 1264, 1891, 1936, 2059
PvuII	CAGCTG	1 cut(s)	1006
RsaI	GTAC	2 cut(s)	1014, 1020
RsaNI	GTAC	2 cut(s)	1013, 1019
SatI	GCNGC	8 cut(s)	349, 352, 564, 1397, 1494, 1705, 1821, 1824
Sau96I	GGNCC	5 cut(s)	63, 511, 829, 1691, 2094
SchI	GAGTC	7 cut(s)	1546, 1565, 1766, 1873, 1963, 1978, 2041
ScrFI	CCNGG	8 cut(s)	501, 597, 857, 858, 1172, 1343, 1602, 1941
SduI	GDGCHC	1 cut(s)	955
SfaNI	GCATC	4 cut(s)	36, 1231, 1480, 1955
SfcI	CTRYAG	5 cut(s)	237, 716, 1705, 1824, 1896
SfuI	TTCGAA	2 cut(s)	71, 137
SinI	GGWCC	4 cut(s)	511, 829, 1691, 2094
SmaI	CCCGGG	1 cut(s)	858
SmlI	CTYRAG	1 cut(s)	1582
SmoI	CTYRAG	1 cut(s)	1582
SseBI	AGGCCT	1 cut(s)	205
SspMI	CTAG	3 cut(s)	995, 1688, 1754
StuI	AGGCCT	1 cut(s)	205
StyD4I	CCNGG	8 cut(s)	499, 595, 855, 856, 1170, 1341, 1600, 1939
StyI	CCWWGG	2 cut(s)	837, 890
TaaI	ACNGT	3 cut(s)	1023, 1312, 1351
TaiI	ACGT	3 cut(s)	958, 1048, 1907
TaqI	TCGA	5 cut(s)	71, 131, 137, 932, 1606
TatI	WGTACW	1 cut(s)	1018
TauI	GCSGC	3 cut(s)	351, 354, 566
TfiI	GAWTC	5 cut(s)	926, 944, 1034, 1805, 1997
TseFI	GTSAC	1 cut(s)	1568
TseI	GCWGC	5 cut(s)	1396, 1493, 1704, 1820, 1823
Tsp45I	GTSAC	1 cut(s)	1568
TspGWI	ACGGA	3 cut(s)	488, 1271, 1673
TspMI	CCCGGG	1 cut(s)	856
Van91I	CCANNNNNTGG	1 cut(s)	2021
Vha464I	CTTAAG	1 cut(s)	1582
VneI	GTGCAC	1 cut(s)	951
VpaK11BI	GGWCC	4 cut(s)	511, 829, 1691, 2094
XagI	CCTNNNNNAGG	1 cut(s)	836
XapI	RAATTY	3 cut(s)	88, 133, 1166
XceI	RCATGY	2 cut(s)	854, 1403
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1178
XmaI	CCCGGG	1 cut(s)	856
XmnI	GAANNNNTTC	2 cut(s)	644, 1996
XspI	CTAG	3 cut(s)	995, 1688, 1754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.