Agamous-like MADS-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G24840 |
| fragaria_vesca | FvH4_2g03020 FvH4_6g32050 |
| malus_domestica | MD05G1108000.v1.1 MD10G1112400.v1.1 |
| prunus_persica | Prupe.2G047900_v2.0.a1 Prupe.8G152000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0139711 RchiOBHm_Chr2g0139721 RchiOBHm_Chr2g0139731 RchiOBHm_Chr6g0247811 |
| rosa_laevigata | RLG00000015177 RLG00000019567 RLG00000019828 |
| rosa_multiflora | Rmu_co8045644.1_g000001 Rmu_sc0000545.1_g000001 Rmu_sc0000545.1_g000002 Rmu_sc0001048.1_g000001 Rmu_sc0009714.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00105250 Rroxscaffold_2G00105260 Rroxscaffold_7G00213630 |
| rosa_rugosa | Rorug02G0359300 Rorug02G0359400 Rorug04G0364100 Rorug04G0364200 Rorug05G0529100 |
| rosa_samantha | Rh2AG409200 Rh2BG419600 Rh2CG395500 Rh2DG429200 Rh4CG452000 Rh6AG043900 Rh6CG037400 Rh6DG034500 |
| rosa_wichuraiana | Rw2G033440 Rw2G033450 Rw6G003810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 229 |
| AclWI | GGATC | 2 cut(s) | 433, 547 |
| AcoI | YGGCCR | 2 cut(s) | 199, 418 |
| AcuI | CTGAAG | 1 cut(s) | 512 |
| AcyI | GRCGYC | 1 cut(s) | 34 |
| AfaI | GTAC | 1 cut(s) | 584 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 29, 592 |
| AgsI | TTSAA | 3 cut(s) | 115, 530, 550 |
| AjnI | CCWGG | 3 cut(s) | 22, 27, 420 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 173, 205 |
| AluBI | AGCT | 3 cut(s) | 130, 334, 397 |
| AluI | AGCT | 3 cut(s) | 130, 334, 397 |
| Alw21I | GWGCWC | 1 cut(s) | 132 |
| Alw26I | GTCTC | 1 cut(s) | 427 |
| AlwI | GGATC | 2 cut(s) | 433, 547 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 263, 490 |
| AoxI | GGCC | 3 cut(s) | 25, 199, 418 |
| ApeKI | GCWGC | 2 cut(s) | 497, 566 |
| AseI | ATTAAT | 1 cut(s) | 347 |
| BalI | TGGCCA | 1 cut(s) | 201 |
| BanII | GRGCYC | 2 cut(s) | 111, 132 |
| BbsI | GAAGAC | 1 cut(s) | 160 |
| Bbv12I | GWGCWC | 1 cut(s) | 132 |
| BbvI | GCAGC | 2 cut(s) | 484, 553 |
| BccI | CCATC | 2 cut(s) | 227, 578 |
| BciT130I | CCWGG | 3 cut(s) | 24, 29, 422 |
| BclI | TGATCA | 1 cut(s) | 292 |
| BcoDI | GTCTC | 1 cut(s) | 427 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BisI | GCNGC | 2 cut(s) | 498, 567 |
| BlsI | GCNGC | 2 cut(s) | 499, 568 |
| Bme1390I | CCNGG | 3 cut(s) | 24, 29, 422 |
| BmrFI | CCNGG | 3 cut(s) | 24, 29, 422 |
| BpiI | GAAGAC | 1 cut(s) | 160 |
| Bpu10I | CCTNAGC | 1 cut(s) | 300 |
| BsaHI | GRCGYC | 1 cut(s) | 34 |
| BsaJI | CCNNGG | 2 cut(s) | 28, 421 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 29, 592 |
| Bse118I | RCCGGY | 1 cut(s) | 416 |
| Bse1I | ACTGG | 1 cut(s) | 556 |
| Bse3DI | GCAATG | 1 cut(s) | 507 |
| BseBI | CCWGG | 3 cut(s) | 24, 29, 422 |
| BseDI | CCNNGG | 2 cut(s) | 28, 421 |
| BseGI | GGATG | 2 cut(s) | 219, 601 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 29, 592 |
| BseMI | GCAATG | 1 cut(s) | 507 |
| BseMII | CTCAG | 3 cut(s) | 314, 366, 593 |
| BseNI | ACTGG | 1 cut(s) | 556 |
| BseXI | GCAGC | 2 cut(s) | 484, 553 |
| BsgI | GTGCAG | 1 cut(s) | 118 |
| BshFI | GGCC | 3 cut(s) | 27, 201, 420 |
| BsiHKAI | GWGCWC | 1 cut(s) | 132 |
| BsiSI | CCGG | 1 cut(s) | 417 |
| BslFI | GGGAC | 2 cut(s) | 45, 483 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 29, 592 |
| BsmAI | GTCTC | 1 cut(s) | 427 |
| BsmBI | CGTCTC | 1 cut(s) | 427 |
| BsmFI | GGGAC | 2 cut(s) | 45, 483 |
| BsnI | GGCC | 3 cut(s) | 27, 201, 420 |
| Bsp1286I | GDGCHC | 2 cut(s) | 111, 132 |
| Bsp143I | GATC | 3 cut(s) | 292, 425, 552 |
| BspACI | CCGC | 1 cut(s) | 229 |
| BspANI | GGCC | 3 cut(s) | 27, 201, 420 |
| BspCNI | CTCAG | 3 cut(s) | 313, 367, 592 |
| BspHI | TCATGA | 1 cut(s) | 328 |
| BspPI | GGATC | 2 cut(s) | 433, 547 |
| BspQI | GCTCTTC | 1 cut(s) | 116 |
| BsrDI | GCAATG | 1 cut(s) | 507 |
| BsrFI | RCCGGY | 1 cut(s) | 416 |
| BsrI | ACTGG | 1 cut(s) | 556 |
| BssAI | RCCGGY | 1 cut(s) | 416 |
| BssECI | CCNNGG | 2 cut(s) | 28, 421 |
| BssMI | GATC | 3 cut(s) | 292, 425, 552 |
| BssNI | GRCGYC | 1 cut(s) | 34 |
| Bst2UI | CCWGG | 3 cut(s) | 24, 29, 422 |
| Bst4CI | ACNGT | 3 cut(s) | 139, 320, 438 |
| Bst6I | CTCTTC | 2 cut(s) | 116, 595 |
| BstACI | GRCGYC | 1 cut(s) | 34 |
| BstC8I | GCNNGC | 1 cut(s) | 418 |
| BstDEI | CTNAG | 3 cut(s) | 300, 375, 579 |
| BstF5I | GGATG | 2 cut(s) | 219, 601 |
| BstKTI | GATC | 3 cut(s) | 295, 428, 555 |
| BstMAI | GTCTC | 1 cut(s) | 427 |
| BstMBI | GATC | 3 cut(s) | 292, 425, 552 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 33, 59, 237, 417 |
| BstNI | CCWGG | 3 cut(s) | 24, 29, 422 |
| BstSCI | CCNGG | 3 cut(s) | 22, 27, 420 |
| BstV1I | GCAGC | 2 cut(s) | 484, 553 |
| BstV2I | GAAGAC | 1 cut(s) | 160 |
| BstX2I | RGATCY | 1 cut(s) | 552 |
| BstYI | RGATCY | 1 cut(s) | 552 |
| BsuRI | GGCC | 3 cut(s) | 27, 201, 420 |
| BtsCI | GGATG | 2 cut(s) | 219, 601 |
| BtsIMutI | CAGTG | 1 cut(s) | 325 |
| Cac8I | GCNNGC | 1 cut(s) | 418 |
| CaiI | CAGNNNCTG | 2 cut(s) | 263, 490 |
| CciI | TCATGA | 1 cut(s) | 328 |
| Cfr10I | RCCGGY | 1 cut(s) | 416 |
| CseI | GACGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 583 |
| CviAII | CATG | 4 cut(s) | 209, 310, 329, 476 |
| CviQI | GTAC | 1 cut(s) | 583 |
| DdeI | CTNAG | 3 cut(s) | 300, 375, 579 |
| DpnI | GATC | 3 cut(s) | 294, 427, 554 |
| DpnII | GATC | 3 cut(s) | 292, 425, 552 |
| EaeI | YGGCCR | 2 cut(s) | 199, 418 |
| Eam1104I | CTCTTC | 2 cut(s) | 116, 595 |
| EarI | CTCTTC | 2 cut(s) | 116, 595 |
| Ecl136II | GAGCTC | 1 cut(s) | 130 |
| Eco24I | GRGCYC | 2 cut(s) | 111, 132 |
| Eco53kI | GAGCTC | 1 cut(s) | 130 |
| Eco57I | CTGAAG | 1 cut(s) | 512 |
| EcoICRI | GAGCTC | 1 cut(s) | 130 |
| EcoRII | CCWGG | 3 cut(s) | 22, 27, 420 |
| EcoT38I | GRGCYC | 2 cut(s) | 111, 132 |
| Esp3I | CGTCTC | 1 cut(s) | 427 |
| FaeI | CATG | 4 cut(s) | 212, 313, 332, 479 |
| FaiI | YATR | 6 cut(s) | 8, 210, 311, 330, 341, 477 |
| FaqI | GGGAC | 2 cut(s) | 45, 483 |
| FatI | CATG | 4 cut(s) | 208, 309, 328, 475 |
| FbaI | TGATCA | 1 cut(s) | 292 |
| Fnu4HI | GCNGC | 2 cut(s) | 498, 567 |
| FokI | GGATG | 1 cut(s) | 206 |
| FriOI | GRGCYC | 2 cut(s) | 111, 132 |
| Fsp4HI | GCNGC | 2 cut(s) | 498, 567 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GluI | GCNGC | 2 cut(s) | 498, 567 |
| HaeIII | GGCC | 3 cut(s) | 27, 201, 420 |
| HapII | CCGG | 1 cut(s) | 417 |
| HgaI | GACGC | 1 cut(s) | 42 |
| Hin1I | GRCGYC | 1 cut(s) | 34 |
| Hin1II | CATG | 4 cut(s) | 212, 313, 332, 479 |
| HinfI | GANTC | 4 cut(s) | 43, 215, 260, 355 |
| HpaII | CCGG | 1 cut(s) | 417 |
| Hpy166II | GTNNAC | 2 cut(s) | 95, 538 |
| Hpy188I | TCNGA | 3 cut(s) | 265, 354, 595 |
| Hpy188III | TCNNGA | 4 cut(s) | 115, 329, 432, 514 |
| Hpy8I | GTNNAC | 2 cut(s) | 95, 538 |
| Hpy99I | CGWCG | 1 cut(s) | 102 |
| HpyAV | CCTTC | 5 cut(s) | 112, 199, 261, 487, 499 |
| HpyCH4III | ACNGT | 3 cut(s) | 139, 320, 438 |
| HpyCH4IV | ACGT | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 5 cut(s) | 135, 158, 240, 475, 500 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 33, 59, 237, 417 |
| HpyF3I | CTNAG | 3 cut(s) | 300, 375, 579 |
| HpySE526I | ACGT | 1 cut(s) | 97 |
| Hsp92I | GRCGYC | 1 cut(s) | 34 |
| Hsp92II | CATG | 4 cut(s) | 212, 313, 332, 479 |
| KroI | GCCGGC | 1 cut(s) | 416 |
| KroNI | GCCGGC | 1 cut(s) | 418 |
| Ksp22I | TGATCA | 1 cut(s) | 292 |
| Kzo9I | GATC | 3 cut(s) | 292, 425, 552 |
| LguI | GCTCTTC | 1 cut(s) | 116 |
| Lsp1109I | GCAGC | 2 cut(s) | 484, 553 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MaeII | ACGT | 1 cut(s) | 97 |
| MaeIII | GTNAC | 2 cut(s) | 82, 314 |
| MalI | GATC | 3 cut(s) | 294, 427, 554 |
| MboI | GATC | 3 cut(s) | 292, 425, 552 |
| MboII | GAAGA | 7 cut(s) | 25, 28, 103, 160, 529, 562, 582 |
| MfeI | CAATTG | 2 cut(s) | 48, 456 |
| MflI | RGATCY | 1 cut(s) | 552 |
| MhlI | GDGCHC | 2 cut(s) | 111, 132 |
| MlsI | TGGCCA | 1 cut(s) | 201 |
| MluCI | AATT | 5 cut(s) | 48, 73, 348, 456, 574 |
| MluNI | TGGCCA | 1 cut(s) | 201 |
| MlyI | GAGTC | 3 cut(s) | 224, 254, 349 |
| MnlI | CCTC | 4 cut(s) | 216, 364, 380, 502 |
| Mox20I | TGGCCA | 1 cut(s) | 201 |
| MroNI | GCCGGC | 1 cut(s) | 416 |
| MscI | TGGCCA | 1 cut(s) | 201 |
| MseI | TTAA | 2 cut(s) | 336, 347 |
| MslI | CAYNNNNRTG | 1 cut(s) | 207 |
| Msp20I | TGGCCA | 1 cut(s) | 201 |
| MspI | CCGG | 1 cut(s) | 417 |
| MspR9I | CCNGG | 3 cut(s) | 24, 29, 422 |
| MunI | CAATTG | 2 cut(s) | 48, 456 |
| MvaI | CCWGG | 3 cut(s) | 24, 29, 422 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 33, 59, 237, 417 |
| NaeI | GCCGGC | 1 cut(s) | 418 |
| NdeII | GATC | 3 cut(s) | 292, 425, 552 |
| NgoMIV | GCCGGC | 1 cut(s) | 416 |
| NlaIII | CATG | 4 cut(s) | 212, 313, 332, 479 |
| NmuCI | GTSAC | 2 cut(s) | 82, 314 |
| PagI | TCATGA | 1 cut(s) | 328 |
| PciSI | GCTCTTC | 1 cut(s) | 116 |
| PdiI | GCCGGC | 1 cut(s) | 418 |
| PfeI | GAWTC | 1 cut(s) | 43 |
| PkrI | GCNGC | 2 cut(s) | 499, 568 |
| PleI | GAGTC | 3 cut(s) | 223, 254, 349 |
| PpsI | GAGTC | 3 cut(s) | 223, 254, 349 |
| PshBI | ATTAAT | 1 cut(s) | 347 |
| Psp124BI | GAGCTC | 1 cut(s) | 132 |
| Psp6I | CCWGG | 3 cut(s) | 22, 27, 420 |
| PspGI | CCWGG | 3 cut(s) | 22, 27, 420 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 85, 117 |
| PstNI | CAGNNNCTG | 2 cut(s) | 263, 490 |
| PsuI | RGATCY | 1 cut(s) | 552 |
| RsaI | GTAC | 1 cut(s) | 584 |
| RsaNI | GTAC | 1 cut(s) | 583 |
| RseI | CAYNNNNRTG | 1 cut(s) | 207 |
| SacI | GAGCTC | 1 cut(s) | 132 |
| SapI | GCTCTTC | 1 cut(s) | 116 |
| SaqAI | TTAA | 2 cut(s) | 336, 347 |
| SatI | GCNGC | 2 cut(s) | 498, 567 |
| Sau3AI | GATC | 3 cut(s) | 292, 425, 552 |
| SchI | GAGTC | 3 cut(s) | 224, 254, 349 |
| ScrFI | CCNGG | 3 cut(s) | 24, 29, 422 |
| SduI | GDGCHC | 2 cut(s) | 111, 132 |
| SetI | ASST | 6 cut(s) | 100, 132, 253, 336, 399, 513 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 207 |
| Sse9I | AATT | 5 cut(s) | 48, 73, 348, 456, 574 |
| SsiI | CCGC | 1 cut(s) | 229 |
| SspMI | CTAG | 1 cut(s) | 123 |
| SstI | GAGCTC | 1 cut(s) | 132 |
| StyD4I | CCNGG | 3 cut(s) | 22, 27, 420 |
| TaaI | ACNGT | 3 cut(s) | 139, 320, 438 |
| TaiI | ACGT | 1 cut(s) | 100 |
| TaqI | TCGA | 1 cut(s) | 431 |
| TasI | AATT | 5 cut(s) | 48, 73, 348, 456, 574 |
| TfiI | GAWTC | 1 cut(s) | 43 |
| Tru1I | TTAA | 2 cut(s) | 336, 347 |
| Tru9I | TTAA | 2 cut(s) | 336, 347 |
| TscAI | CASTG | 1 cut(s) | 325 |
| TseFI | GTSAC | 2 cut(s) | 82, 314 |
| TseI | GCWGC | 2 cut(s) | 497, 566 |
| Tsp45I | GTSAC | 2 cut(s) | 82, 314 |
| TspDTI | ATGAA | 4 cut(s) | 26, 317, 477, 518 |
| TspRI | CASTG | 1 cut(s) | 325 |
| VspI | ATTAAT | 1 cut(s) | 347 |
| XspI | CTAG | 1 cut(s) | 123 |