Agamous-like MADS-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G24840 |
| fragaria_vesca | FvH4_2g03020 FvH4_6g32050 |
| malus_domestica | MD05G1108000.v1.1 MD10G1112400.v1.1 |
| prunus_persica | Prupe.2G047900_v2.0.a1 Prupe.8G152000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0139711 RchiOBHm_Chr2g0139721 RchiOBHm_Chr2g0139731 RchiOBHm_Chr6g0247811 |
| rosa_laevigata | RLG00000015177 RLG00000019567 RLG00000019828 |
| rosa_multiflora | Rmu_co8045644.1_g000001 Rmu_sc0000545.1_g000001 Rmu_sc0000545.1_g000002 Rmu_sc0001048.1_g000001 Rmu_sc0009714.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00105250 Rroxscaffold_2G00105260 Rroxscaffold_7G00213630 |
| rosa_rugosa | Rorug02G0359300 Rorug02G0359400 Rorug04G0364100 Rorug04G0364200 Rorug05G0529100 |
| rosa_samantha | Rh2AG409200 Rh2BG419600 Rh2CG395500 Rh2DG429200 Rh4CG452000 Rh6AG043900 Rh6CG037400 Rh6DG034500 |
| rosa_wichuraiana | Rw2G033440 Rw2G033450 Rw6G003810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 872, 1213 |
| AccI | GTMKAC | 1 cut(s) | 808 |
| AccII | CGCG | 1 cut(s) | 1221 |
| AciI | CCGC | 2 cut(s) | 750, 1221 |
| AclWI | GGATC | 4 cut(s) | 113, 692, 896, 1001 |
| AcsI | RAATTY | 3 cut(s) | 459, 972, 1098 |
| AcuI | CTGAAG | 2 cut(s) | 998, 1301 |
| AfaI | GTAC | 4 cut(s) | 41, 541, 602, 1085 |
| AfeI | AGCGCT | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 409, 872, 1213 |
| AflII | CTTAAG | 1 cut(s) | 446 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 732 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1110, 1142 |
| AluBI | AGCT | 9 cut(s) | 287, 350, 451, 628, 650, 770, 1150, 1210, 1279 |
| AluI | AGCT | 9 cut(s) | 287, 350, 451, 628, 650, 770, 1150, 1210, 1279 |
| Alw26I | GTCTC | 5 cut(s) | 107, 230, 371, 602, 1290 |
| AlwI | GGATC | 4 cut(s) | 113, 692, 896, 1001 |
| Aor51HI | AGCGCT | 1 cut(s) | 132 |
| AoxI | GGCC | 2 cut(s) | 399, 747 |
| ApeKI | GCWGC | 4 cut(s) | 935, 1063, 1147, 1253 |
| ApoI | RAATTY | 3 cut(s) | 459, 972, 1098 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 153, 972 |
| AspA2I | CCTAGG | 1 cut(s) | 680 |
| AspLEI | GCGC | 2 cut(s) | 133, 1221 |
| AspS9I | GGNCC | 1 cut(s) | 400 |
| AsuC2I | CCSGG | 1 cut(s) | 343 |
| AsuHPI | GGTGA | 2 cut(s) | 1213, 1235 |
| AsuII | TTCGAA | 2 cut(s) | 966, 1018 |
| AvrII | CCTAGG | 1 cut(s) | 680 |
| AxyI | CCTNAGG | 1 cut(s) | 57 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 203, 235 |
| BbsI | GAAGAC | 1 cut(s) | 998 |
| BbvI | GCAGC | 4 cut(s) | 947, 1050, 1159, 1240 |
| BccI | CCATC | 4 cut(s) | 241, 530, 866, 1178 |
| BceAI | ACGGC | 3 cut(s) | 874, 1066, 1241 |
| BclI | TGATCA | 2 cut(s) | 547, 1195 |
| BcnI | CCSGG | 1 cut(s) | 343 |
| BcoDI | GTCTC | 5 cut(s) | 107, 230, 371, 602, 1290 |
| BfaI | CTAG | 2 cut(s) | 351, 681 |
| BfoI | RGCGCY | 1 cut(s) | 134 |
| BfrI | CTTAAG | 1 cut(s) | 446 |
| BglII | AGATCT | 3 cut(s) | 213, 909, 1033 |
| BisI | GCNGC | 5 cut(s) | 750, 936, 1064, 1148, 1254 |
| BlnI | CCTAGG | 1 cut(s) | 680 |
| BlsI | GCNGC | 5 cut(s) | 751, 937, 1065, 1149, 1255 |
| BmcAI | AGTACT | 1 cut(s) | 41 |
| Bme1390I | CCNGG | 1 cut(s) | 343 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 732 |
| BmgT120I | GGNCC | 1 cut(s) | 400 |
| BmiI | GGNNCC | 3 cut(s) | 7, 165, 797 |
| BmrFI | CCNGG | 1 cut(s) | 343 |
| BmsI | GCATC | 2 cut(s) | 708, 837 |
| BpiI | GAAGAC | 1 cut(s) | 998 |
| Bpu14I | TTCGAA | 2 cut(s) | 966, 1018 |
| BpuMI | CCSGG | 1 cut(s) | 343 |
| Bsa29I | ATCGAT | 1 cut(s) | 1182 |
| BsaBI | GATNNNNATC | 2 cut(s) | 190, 381 |
| BsaI | GGTCTC | 1 cut(s) | 371 |
| BsaJI | CCNNGG | 1 cut(s) | 680 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 409, 872, 1213 |
| Bse1I | ACTGG | 1 cut(s) | 85 |
| Bse21I | CCTNAGG | 1 cut(s) | 57 |
| Bse3DI | GCAATG | 1 cut(s) | 924 |
| Bse8I | GATNNNNATC | 2 cut(s) | 190, 381 |
| BseCI | ATCGAT | 1 cut(s) | 1182 |
| BseDI | CCNNGG | 1 cut(s) | 680 |
| BseGI | GGATG | 2 cut(s) | 676, 1009 |
| BseJI | GATNNNNATC | 2 cut(s) | 190, 381 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 409, 872, 1213 |
| BseMI | GCAATG | 1 cut(s) | 924 |
| BseMII | CTCAG | 7 cut(s) | 48, 168, 241, 597, 846, 897, 1122 |
| BseNI | ACTGG | 1 cut(s) | 85 |
| BseRI | GAGGAG | 1 cut(s) | 74 |
| BseXI | GCAGC | 4 cut(s) | 947, 1050, 1159, 1240 |
| Bsh1236I | CGCG | 1 cut(s) | 1221 |
| BshFI | GGCC | 2 cut(s) | 401, 749 |
| BshVI | ATCGAT | 1 cut(s) | 1182 |
| BsiSI | CCGG | 1 cut(s) | 342 |
| BslFI | GGGAC | 1 cut(s) | 1112 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 409, 872, 1213 |
| BsmAI | GTCTC | 5 cut(s) | 107, 230, 371, 602, 1290 |
| BsmBI | CGTCTC | 1 cut(s) | 230 |
| BsmFI | GGGAC | 1 cut(s) | 1112 |
| BsnI | GGCC | 2 cut(s) | 401, 749 |
| Bso31I | GGTCTC | 1 cut(s) | 371 |
| Bsp119I | TTCGAA | 2 cut(s) | 966, 1018 |
| Bsp1407I | TGTACA | 1 cut(s) | 600 |
| Bsp143I | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| BspACI | CCGC | 2 cut(s) | 750, 1221 |
| BspANI | GGCC | 2 cut(s) | 401, 749 |
| BspCNI | CTCAG | 7 cut(s) | 49, 169, 240, 598, 847, 898, 1123 |
| BspDI | ATCGAT | 1 cut(s) | 1182 |
| BspFNI | CGCG | 1 cut(s) | 1221 |
| BspLI | GGNNCC | 3 cut(s) | 7, 165, 797 |
| BspPI | GGATC | 4 cut(s) | 113, 692, 896, 1001 |
| BspQI | GCTCTTC | 1 cut(s) | 45 |
| BspT104I | TTCGAA | 2 cut(s) | 966, 1018 |
| BspTI | CTTAAG | 1 cut(s) | 446 |
| BspTNI | GGTCTC | 1 cut(s) | 371 |
| BsrDI | GCAATG | 1 cut(s) | 924 |
| BsrGI | TGTACA | 1 cut(s) | 600 |
| BsrI | ACTGG | 1 cut(s) | 85 |
| BssECI | CCNNGG | 1 cut(s) | 680 |
| BssMI | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| BssNAI | GTATAC | 1 cut(s) | 809 |
| BssT1I | CCWWGG | 1 cut(s) | 680 |
| Bst1107I | GTATAC | 1 cut(s) | 809 |
| Bst4CI | ACNGT | 2 cut(s) | 208, 224 |
| Bst6I | CTCTTC | 3 cut(s) | 45, 402, 974 |
| BstAFI | CTTAAG | 1 cut(s) | 446 |
| BstAUI | TGTACA | 1 cut(s) | 600 |
| BstBI | TTCGAA | 2 cut(s) | 966, 1018 |
| BstDEI | CTNAG | 7 cut(s) | 57, 177, 227, 606, 855, 906, 1131 |
| BstEII | GGTNACC | 1 cut(s) | 1304 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 407 |
| BstF5I | GGATG | 2 cut(s) | 676, 1009 |
| BstFNI | CGCG | 1 cut(s) | 1221 |
| BstH2I | RGCGCY | 1 cut(s) | 134 |
| BstHHI | GCGC | 2 cut(s) | 133, 1221 |
| BstKTI | GATC | 9 cut(s) | 121, 216, 550, 687, 904, 912, 1009, 1036, 1198 |
| BstMAI | GTCTC | 5 cut(s) | 107, 230, 371, 602, 1290 |
| BstMBI | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 61, 749, 1216 |
| BstPI | GGTNACC | 1 cut(s) | 1304 |
| BstSCI | CCNGG | 1 cut(s) | 341 |
| BstUI | CGCG | 1 cut(s) | 1221 |
| BstV1I | GCAGC | 4 cut(s) | 947, 1050, 1159, 1240 |
| BstV2I | GAAGAC | 1 cut(s) | 998 |
| BstX2I | RGATCY | 3 cut(s) | 213, 909, 1033 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 106 |
| BstYI | RGATCY | 3 cut(s) | 213, 909, 1033 |
| BstZ17I | GTATAC | 1 cut(s) | 809 |
| Bsu15I | ATCGAT | 1 cut(s) | 1182 |
| Bsu36I | CCTNAGG | 1 cut(s) | 57 |
| BsuRI | GGCC | 2 cut(s) | 401, 749 |
| BsuTUI | ATCGAT | 1 cut(s) | 1182 |
| BtsCI | GGATG | 2 cut(s) | 676, 1009 |
| BtsIMutI | CAGTG | 3 cut(s) | 603, 743, 753 |
| CfoI | GCGC | 2 cut(s) | 133, 1221 |
| Cfr13I | GGNCC | 1 cut(s) | 400 |
| ClaI | ATCGAT | 1 cut(s) | 1182 |
| CseI | GACGC | 1 cut(s) | 722 |
| Csp6I | GTAC | 4 cut(s) | 40, 540, 601, 1084 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 503, 538 |
| CviAII | CATG | 3 cut(s) | 160, 688, 1213 |
| CviQI | GTAC | 4 cut(s) | 40, 540, 601, 1084 |
| DdeI | CTNAG | 7 cut(s) | 57, 177, 227, 606, 855, 906, 1131 |
| DpnI | GATC | 9 cut(s) | 120, 215, 549, 686, 903, 911, 1008, 1035, 1197 |
| DpnII | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| DraI | TTTAAA | 1 cut(s) | 190 |
| DriI | GACNNNNNGTC | 1 cut(s) | 732 |
| Eam1104I | CTCTTC | 3 cut(s) | 45, 402, 974 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 732 |
| EarI | CTCTTC | 3 cut(s) | 45, 402, 974 |
| Eco130I | CCWWGG | 1 cut(s) | 680 |
| Eco31I | GGTCTC | 1 cut(s) | 371 |
| Eco47III | AGCGCT | 1 cut(s) | 132 |
| Eco57I | CTGAAG | 2 cut(s) | 998, 1301 |
| Eco81I | CCTNAGG | 1 cut(s) | 57 |
| Eco91I | GGTNACC | 1 cut(s) | 1304 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 407 |
| EcoO109I | RGGNCCY | 1 cut(s) | 400 |
| EcoO65I | GGTNACC | 1 cut(s) | 1304 |
| EcoRI | GAATTC | 1 cut(s) | 1098 |
| EcoT14I | CCWWGG | 1 cut(s) | 680 |
| EcoT22I | ATGCAT | 1 cut(s) | 723 |
| ErhI | CCWWGG | 1 cut(s) | 680 |
| Esp3I | CGTCTC | 1 cut(s) | 230 |
| FaeI | CATG | 3 cut(s) | 163, 691, 1216 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 117, 149, 1050, 1082 |
| FaqI | GGGAC | 1 cut(s) | 1112 |
| FatI | CATG | 3 cut(s) | 159, 687, 1212 |
| FauNDI | CATATG | 1 cut(s) | 723 |
| FbaI | TGATCA | 2 cut(s) | 547, 1195 |
| FblI | GTMKAC | 1 cut(s) | 808 |
| Fnu4HI | GCNGC | 5 cut(s) | 750, 936, 1064, 1148, 1254 |
| FokI | GGATG | 2 cut(s) | 663, 1016 |
| Fsp4HI | GCNGC | 5 cut(s) | 750, 936, 1064, 1148, 1254 |
| FspBI | CTAG | 2 cut(s) | 351, 681 |
| GlaI | GCGC | 2 cut(s) | 132, 1220 |
| GluI | GCNGC | 5 cut(s) | 750, 936, 1064, 1148, 1254 |
| HaeII | RGCGCY | 1 cut(s) | 134 |
| HaeIII | GGCC | 2 cut(s) | 401, 749 |
| HapII | CCGG | 1 cut(s) | 342 |
| HgaI | GACGC | 1 cut(s) | 722 |
| HhaI | GCGC | 2 cut(s) | 133, 1221 |
| Hin1II | CATG | 3 cut(s) | 163, 691, 1216 |
| Hin6I | GCGC | 2 cut(s) | 131, 1219 |
| HinP1I | GCGC | 2 cut(s) | 131, 1219 |
| HincII | GTYRAC | 2 cut(s) | 270, 566 |
| HindII | GTYRAC | 2 cut(s) | 270, 566 |
| HindIII | AAGCTT | 2 cut(s) | 449, 768 |
| HinfI | GANTC | 4 cut(s) | 33, 251, 592, 1092 |
| HpaII | CCGG | 1 cut(s) | 342 |
| HphI | GGTGA | 2 cut(s) | 1213, 1235 |
| Hpy166II | GTNNAC | 6 cut(s) | 270, 566, 603, 809, 1086, 1204 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 46, 357, 387, 856, 978, 1097 |
| Hpy188III | TCNNGA | 8 cut(s) | 122, 138, 229, 436, 701, 775, 878, 905 |
| Hpy8I | GTNNAC | 6 cut(s) | 270, 566, 603, 809, 1086, 1204 |
| HpyAV | CCTTC | 5 cut(s) | 119, 499, 1114, 1228, 1233 |
| HpyCH4III | ACNGT | 2 cut(s) | 208, 224 |
| HpyCH4IV | ACGT | 1 cut(s) | 69 |
| HpyCH4V | TGCA | 6 cut(s) | 373, 456, 584, 656, 721, 850 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 61, 749, 1216 |
| HpyF3I | CTNAG | 7 cut(s) | 57, 177, 227, 606, 855, 906, 1131 |
| HpySE526I | ACGT | 1 cut(s) | 69 |
| Hsp92II | CATG | 3 cut(s) | 163, 691, 1216 |
| HspAI | GCGC | 2 cut(s) | 131, 1219 |
| Ksp22I | TGATCA | 2 cut(s) | 547, 1195 |
| Kzo9I | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| LguI | GCTCTTC | 1 cut(s) | 45 |
| LmnI | GCTCC | 4 cut(s) | 61, 128, 163, 1216 |
| Lsp1109I | GCAGC | 4 cut(s) | 947, 1050, 1159, 1240 |
| LweI | GCATC | 2 cut(s) | 708, 837 |
| MaeI | CTAG | 2 cut(s) | 351, 681 |
| MaeII | ACGT | 1 cut(s) | 69 |
| MaeIII | GTNAC | 3 cut(s) | 289, 1223, 1304 |
| MalI | GATC | 9 cut(s) | 120, 215, 549, 686, 903, 911, 1008, 1035, 1197 |
| MboI | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| MfeI | CAATTG | 1 cut(s) | 585 |
| MflI | RGATCY | 3 cut(s) | 213, 909, 1033 |
| Mph1103I | ATGCAT | 1 cut(s) | 723 |
| MroXI | GAANNNNTTC | 2 cut(s) | 153, 972 |
| MseI | TTAA | 5 cut(s) | 189, 447, 861, 1068, 1122 |
| MspA1I | CMGCKG | 2 cut(s) | 287, 1279 |
| MspCI | CTTAAG | 1 cut(s) | 446 |
| MspI | CCGG | 1 cut(s) | 342 |
| MspR9I | CCNGG | 1 cut(s) | 343 |
| MunI | CAATTG | 1 cut(s) | 585 |
| MvnI | CGCG | 1 cut(s) | 1221 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 61, 749, 1216 |
| NciI | CCSGG | 1 cut(s) | 343 |
| NdeI | CATATG | 1 cut(s) | 723 |
| NdeII | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| NlaIII | CATG | 3 cut(s) | 163, 691, 1216 |
| NlaIV | GGNNCC | 3 cut(s) | 7, 165, 797 |
| NmuCI | GTSAC | 1 cut(s) | 1223 |
| NsiI | ATGCAT | 1 cut(s) | 723 |
| NspV | TTCGAA | 2 cut(s) | 966, 1018 |
| PciSI | GCTCTTC | 1 cut(s) | 45 |
| PdmI | GAANNNNTTC | 2 cut(s) | 153, 972 |
| PfeI | GAWTC | 4 cut(s) | 33, 251, 592, 1092 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 872, 1213 |
| PkrI | GCNGC | 5 cut(s) | 751, 937, 1065, 1149, 1255 |
| PspEI | GGTNACC | 1 cut(s) | 1304 |
| PspN4I | GGNNCC | 3 cut(s) | 7, 165, 797 |
| PspPI | GGNCC | 1 cut(s) | 400 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 74, 106 |
| PsuI | RGATCY | 3 cut(s) | 213, 909, 1033 |
| PvuII | CAGCTG | 2 cut(s) | 287, 1279 |
| RsaI | GTAC | 4 cut(s) | 41, 541, 602, 1085 |
| RsaNI | GTAC | 4 cut(s) | 40, 540, 601, 1084 |
| SapI | GCTCTTC | 1 cut(s) | 45 |
| SaqAI | TTAA | 5 cut(s) | 189, 447, 861, 1068, 1122 |
| SatI | GCNGC | 5 cut(s) | 750, 936, 1064, 1148, 1254 |
| Sau3AI | GATC | 9 cut(s) | 118, 213, 547, 684, 901, 909, 1006, 1033, 1195 |
| Sau96I | GGNCC | 1 cut(s) | 400 |
| ScaI | AGTACT | 1 cut(s) | 41 |
| ScrFI | CCNGG | 1 cut(s) | 343 |
| SfaNI | GCATC | 2 cut(s) | 708, 837 |
| SfuI | TTCGAA | 2 cut(s) | 966, 1018 |
| SmiI | ATTTAAAT | 1 cut(s) | 190 |
| SmlI | CTYRAG | 1 cut(s) | 446 |
| SmoI | CTYRAG | 1 cut(s) | 446 |
| SsiI | CCGC | 2 cut(s) | 750, 1221 |
| SspI | AATATT | 2 cut(s) | 824, 1048 |
| SspMI | CTAG | 2 cut(s) | 351, 681 |
| StyD4I | CCNGG | 1 cut(s) | 341 |
| StyI | CCWWGG | 1 cut(s) | 680 |
| SwaI | ATTTAAAT | 1 cut(s) | 190 |
| TaaI | ACNGT | 2 cut(s) | 208, 224 |
| TaiI | ACGT | 1 cut(s) | 72 |
| TaqI | TCGA | 5 cut(s) | 36, 966, 1018, 1182, 1232 |
| TatI | WGTACW | 2 cut(s) | 39, 600 |
| TauI | GCSGC | 1 cut(s) | 752 |
| TfiI | GAWTC | 4 cut(s) | 33, 251, 592, 1092 |
| Tru1I | TTAA | 5 cut(s) | 189, 447, 861, 1068, 1122 |
| Tru9I | TTAA | 5 cut(s) | 189, 447, 861, 1068, 1122 |
| TscAI | CASTG | 3 cut(s) | 610, 743, 760 |
| TseFI | GTSAC | 1 cut(s) | 1223 |
| TseI | GCWGC | 4 cut(s) | 935, 1063, 1147, 1253 |
| Tsp45I | GTSAC | 1 cut(s) | 1223 |
| TspDTI | ATGAA | 4 cut(s) | 243, 801, 1003, 1096 |
| TspGWI | ACGGA | 2 cut(s) | 45, 310 |
| TspRI | CASTG | 3 cut(s) | 610, 743, 760 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 872, 1213 |
| Vha464I | CTTAAG | 1 cut(s) | 446 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 407 |
| XapI | RAATTY | 3 cut(s) | 459, 972, 1098 |
| XmaJI | CCTAGG | 1 cut(s) | 680 |
| XmiI | GTMKAC | 1 cut(s) | 808 |
| XmnI | GAANNNNTTC | 2 cut(s) | 153, 972 |
| XspI | CTAG | 2 cut(s) | 351, 681 |
| ZrmI | AGTACT | 1 cut(s) | 41 |
| Zsp2I | ATGCAT | 1 cut(s) | 723 |