Prupe.2G105000_v2.0.a1

isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
16184850 .. 16200289
15440 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G105000.1

Sequence Viewer

Length: 6465 bp
ATGGATATAGAGTTTGAGGCGAGGGTGAAACCTCTGGAATACAAAGTGAAGGCAATGTCACGTGAGTCGCCATCCCAGAAGGCGGGCCACGTGCTCGACGCCGACCTCCGCTCCCACTGGTCCACCGCTACCAACACCAAGGAGTGGATTCTTCTCGAGCTCAACGAACCTTGCTTGTTATCGCACATACGAATTTACAACAAGTCTGTGCTCGAATGGGAAATTTCAGTTGGCTTACGCTACAAGCCAGAGACATTTGTAAAAGTTCGCCCACGTTGTGAAGCACCGCGACGCGACATGATCTATCCCATGAACTATACTCCCTGTCGCTATGTGCGAATATCTTGTTTGAGGGGAAATCCCATAGCTATTTTCTTCATACAGCTTATCGGGGTTTCAGTGACTGGCCTGGAACCAGAGTTTCAACCAGTTGTTAACCACTTGTTGCCATCCATTATATCTCACAAACAAGATGCCCATGATTTGCATCTTCAGTTGCTTAAAGACATGACAAGTCGGTTGCTTGTGTTCCTTCCCCAACTTGAGGCAGACCTTAATAGCTTCTTGGATGCTGCTGAACCTAATTTACGTTTTCTTGCTATGCTTGCCGGTCCTTTTTATCCCATACTTAATCTTGGGAATGAAAGGACAGCTGCAAAGTCTTCAGGCAATATCTCAGACTCTGAAGTTTCTAAACATAGTCAGCTGTCATCAGCCTTAACCGTGTCTTCTAACTTTGAGCCACGAAGATCACGCGGCACTTCACCTTTCGTCCTGTCAACATCCAGTTCTATAGTATTCCGTGCAGATGCAATTTTTGTGCTGTTGAGGAAGGCATATAAAGATTCTGATTTAGGAATTGTTTGCAGAATGGCTGCTAGAGTTCTGCATAAGCTTATAGAGCCTGTGGCACATGAAGGATCAACACCTCCTGGTGAAGTGACATATGGAGATGAAGCAGTAAAATCAGAAATAACTAATCCGGCACCTTTAGTTGATTACTCAAACTTGTTTGGAGAAGAGTTCCAGTTGCCTGGTGATCACTGGGACTCAAGCTATCTTAACATCTTGGATATAGGAGCAGTGGAGGAAGGGATTTTACATGTTCTTTATGCTTGTGCGTCACAGCCTCAGCTCTGCAGCAAATTAGCAGATAGGACTTCTGACTTCTGGTCTGCGTTACCGCTAGTTCAAGCATTACTGCCAGCACTTCGTCCCTCTGTTAGCCGTCCGTCTGACATTGTTGATGATAGTTTCTCTCAATGGAAACAACCAATTGTTCAAGAAGCCCTCTCCCAGATTGTAGCAACATCGTGTTCACCATTATACCGTCCGCTGCTTCATGCTTGTGCTGGCTATTTATCATCATATTCACCATCACATGCTAAGGCTGCATGTGTTTTGATTGATCTCTGTTGTGGCGTGCTAGCACCTTGGCTAAGTCAAGTGATTGCAAAGGTTGATCTGGCTGTAGAGCTTCTAGAGGATCTTTTGGGTGTAATTCAGGGTGCTCGCCACTCGCTGCCTCGTGCTCGTGCTGCCTTAAAATACATTGTTCTGGCTCTCTCTGGTCACATGGATGATATGCTAGGAAAGTATAAGGAAGTTAAGCATAGGATACTCTTTCTTGTGGAGATGCTAGAGCCTTTCCTTGATCCTGCTGTAGGAAGATTGAAGGGAATAATAGCCTTTGGAGATCTGTCTTCTGCACATCCAGAAAAGCAGGAAGAGAATTGTGTTATTGCCCTCAATGTAATTCGCACGGCAGTGCAGAAACCTGCAGTTCTTCCTTCACTGGAATCTGAATGGAGGCGTGGATCAGTTGCTCCTAGTGTGCTACTCTCGATATTGGAACCTCACATGCAGCTACCTCCTGAAATTGACCTTCGAACATCTCCAGTCCCTAGACCACTGGAACCTGAATCTTTATCTGGTTTATCTCATTCTTCAGCTTCTCACCATGGGGTAGCTTCAAAATCAAACAGCCAGGATGAATTTGACGGGAAGATAGATGTTTCTGAAACAGCCGTAAAAATTGACATTTCGGAAGACGCCAGTCTTCTTTTTGCACCTCCAGAACTGCATAACATTGTATTGACAAGTATATCCAGTTGTCCCAACGAGAACAGCTCTGTCTCTAACCACGGGGATTCTGGCTCTGAACCAAAACATCTGGTCGGGAAACATTTTCCACACAGGTTTCAAATTGACTTAAAACTAGATGCTGGTTTCTCTGCGGAATATTTCAACTTGCAAGCAGATTATTTCCAACTTATAACCTATCAAGACTGCGAGCTCAGGGCTTCTGAATTTCGGCGATTGGCCTTAGATTTGCATTCACAGAATGAGATTACCATTGAGAGTCATGATGCTGCCATAGATGCTTTGCTCTTGGCTGCAGAGTGCTATGTCAATCCATTTTTTATGATGTCTTTTAGAGGAAATCCAAAGTTAATGAAGGAGATAAACGTCAGTGGGATTAGGACTCCACAAAATCATGAAATTGGGGCGCGAATGGTCTCTGGAAAGTCTAAGAATGACCTAGAAACAATATCTCTTCTTGAAAGGAAAAGAGACAAAATTGTTCTTCAAATTCTGCTCGAGGCTGCGGAGTTGGACAGAGAGTATCGAGAAAAGGTTTCAGATGGAGGACTTAGTCCGTACTACACCGTAGGATTTGATGAACAAGTCATTAGGTTGTCTCCGCTTGATGTACAATCTGCGGATGCCATCACCTTGGTTCGACAAAATCAAGCTTTGTTGTGCTGCTTTCTGATTCAACGATTGCGAAGGGAGCAGCACTCGATGCATGAAATTCTTATGCAGTGTATGATATTCTTGTTGAATTCAGCGACTAAGCTATACTGTGCTCCAGAACACGTGATTGACATTGCATTAGGATCCGCTGAGTACTTAAATGGGATGCTAACATCCCTGTATTATCAGTTCAAAGAAAATAATCTGCAGTTGGAGCCGGAAACAATACATGGGATACAACGACGGTGGATACTGCTTCAAAGATTGGTAATTTCTTCAAGCGGTGGCGATGAGGAAACGGGCTTTGCAATCAATAAAAATGGTTTCCGTTATGGAAATCTGATTCCACCTTCAGCCTGGATGCAGAGGATTTCAACTTTTTCTAGATGCACATCCCCTCTTGTTCGATTTCTTGGTTGGATGGCAGTATCTCGTAATGCAAGACAGTACATGAAGGACCAGCTTTTACTTGCTTCTGATCTACCACAGCTGACATCTCTATTGTCTACATTTGCAGACGAACTTTCTGTTGTAGATAATGTTGTGAGTCGAAAATATGAAGAATCAGGGGGCGAAATTGTTTCTGCATCCATTAAAGGATTTGAAGTTGCTGATCAGCAGCATCAGGACCAATCTTTTCGTGTCATTTACCCTGATCTCTTTAAGTTCTTTCCTAATATGAAAAAGCAATTTGAAGCTTTTGGAGAAACCATTTTGGAGGCTGTTGGGTTGCAGTTGAGGTCTCTTCCTTCCAGTATGGTGCCTGATATTTTGTGTTGGTTCTCTGATTTGTGTTCATGGCCATTTCTACATACAGAGCAGCTTTCTGCTGGAAATAGTTCTGACCATTTGAAAGGCTATGTTTCAAAGAATGCCAAAGCAATCATCCTCTATACACTTGAAGCCATTGTAACCGAGCACATGGAAGCAATGGTGCCTGAGATACCTAGAGTGGTGCAAGTGCTAGCATGTCTTTGTAGGGCATCTTACTGCGATGTGTCATTTCTTGATTCTGTATTGTCTTTGTTGAAACCAATCATTTCATATTCTTTGTGTAAGGTGTCTGATGAGGAAAGGTCATTGGTAGATGATTCATGTGTTAATTTTGAGTCATTATGCTTTGATGAGCTTTTCACTAACATCAGACAGGGTGCTAACCAAGATAATTCTACTGAAAAAGTATACAACAGAGGATTGACAATTTTCATTTTGGCGTCTGTCTTTCCTGATTTATCTGCTCAGAGGAGGAGGGAAATGCTGCAGTCCTTAGTTTTTTGGGCCGATTTTACTGCCTTTGAGCCAACTTCTTCTTTCCACAATTACCTTTGTGCATTCCAGAGTGTTATGGAGAGTTGCAAACTTCTGTTAGTTCAGACTTTGCAGTTCTTTGGTGCCATCCCATTGGAGCTGCCCACTGAGGGACAAAATGAAAGTGGACTGGAGTCACATTCATGGTTCCTCAGTGATGTCTACCGTAGTTCAAGTCAAGATAAGGCCTCCGAGAAGTTAGAAGGTAACAATGTTGGTGCTGATATTGTGAATAAAAAGGTTTATCATTTATTTCCTGAGGAAATAGAAGAATTCTCAAAACACTTGGAGGTTCTTATTGGTAAGCTTTACTCGACGACTGAGCTATGTTGGAATCTTCATCATCAACTATCTAAGAAGATGACTATTACATCAACAGAGTGTTTTATGTACTCAAGATTCTTGGCATCAATTGCACAAAGAGTTAATGACGCTCAAGAAAATGATGCTGAAATTTCTTTCCCATCTACATCAGTTGACCAGTTCCCTGATCATTGGAGGACTGGTTTAGAAGTAATTTCTGAGACCATTCTGACCCTTCAAGAAAACAGATGCTGGGAAGTTGCTTCTGTTGTGCTTGATTGTGTACTTGCTGTGCCCCCTAAGTTTGGCCTTAATAGTGTGATTGGCTCCATCTGCTCTGCAATAAAAAGTAGTTCTTGCAATGCACCAAAAATTGCTTGGCGCTTGCAGAGTGATAAATGGCTATTGATTTTGCTTACCAAGGGTGTCCATTCCCTCAAGGAATGTGAGGTTCCTCTTGCTAATTTGTTCTGTACAATGCTGGGTCATCCTGAACCTGAGCAACGATCTATAGCCCTTAAGCTCTTAGGAAAACTTGTTGGCCAAGATTTGAGTGGAGGAACTGCCCTTCAATCTTCCATGTTCTACAAAAATTTAGTTTCACCTGGATTTGTTACATCTGTTCCCGAGTCGATTATTTCTCATTTGGTTTCAAGCACATGGAATCTGGTGGTTGTCCTTGCTTCATCTGATGCATCATTACTTGTGAGGACTCGGGCAATGACACTTCTTGTAGATTGTATCCCATTTGCTGAGCGACGTCTGCTGCAGTCTTTTCTCGCCGCAGCGGATAGTGTTCTTGGCTTGGGAGAGCTTGCCCGTCCAAATTGTGAGGGCCAATTGCTGAGGCTTTCATTAGCACTGATTGCTGGTGCTTGTCTATACTGCCCGGATGAAGATATCTCTCTGATTCCTCAGAATGTTTGGAAGAATATTGAGACTCTGGCATCGTCAAAGCCTGATGGAAGGTCTGGGGATGTCGAGAAAAGGGCTTGCCAAGTCTTGTGTAGATTGAAAAGTGAAGGGGATGAAGCTAAAGAGGTCCTGAGAGAAGTGCTAACTTCAACCTCTTCAAAACAATCTGACCCAGATTTTGAAAGTACTCGCGAGTCCGTTCTTCAGGTCCTTGCCAGTTTAACTTCTGCAAAGTCGTACTTTGATATTTTCTCAAACAAAATTGACCAAGAGGTTATGGAACTAGAGGAGGCTGAATTAGAATGGGATATCCTTCAGAAAGAACATGCATTACATGAATCACCAACCAAAGATGGACATCAGATTCTTTCTCTAAGCTCTCCTGTGGAAGATGATGCACGCCTTAAGCAAATCAAGGATTGCATTCATTCCTTAGAAAAGTCCAAGCTCCATGAAGACATAGTCGCCCGCAGGCAGAAAAAACTTCTTATGAGACGTGCCCGCCAGAAATCTTTTGAAGAGGTAGCTTTACGAGAAGCTGAGCTACTTCAAGAACTTGATAGGGAGAGAGCAGCTGAAGTTGAAAAGGATATCGAGAGACAGAGATTGCTAGAACTTGAGCGTGCAAAAACCAGGGAGCTGCGACAAAACCTTGAGATGGAGAAGGAAAGACAAGCCCAGAGGGAGCTTCAGCGTGAATTGGAACAGGCTGAAGCAGGAGTACGACCATCACGACGTGACTTTTCCTCTACCTACAGCAGTCGGCCACGGGAAAGGTATCGTGAAAGAGAAAATGGAAGAGCAGGTAGTGAAGGTAGCACGAGATCAAGTTCTGGAAATTTGCAGCTTGAAACTTCTACTACCAGTTCTTCCATGGGGACCATGCCAACTGTGGTTCTGTCTGGGTCCCGGCAATTTTCCGGCCAGCCTACCATTTTACAATCTCGTGATCGTCTGGATGATGGTGGCAGTGGTTATGAAGAAAATCTGGATGGAAGCAAAGACTCAGGTGATACGGGTAGTGTTGGAGATCCAGACTCAGTTTCAGCATTTGATGGACAGCCTGGTGGATTTGGGTCAGGTCAGAGGCATGGTTCAAGAGGGAGCAAGTCCAGGCAGGTAGTGGAGCGGAGAGAACGGGATGGGAGGCGAGAAGGAAAGTGGGAAAGAAAACATTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2155

Amino Acids

240.85

Weight (kDa)

5.53

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2276
AatII GACGTC 1 cut(s) 5131
Acc36I ACCTGC 3 cut(s) 1786, 6077, 6391
AccB1I GGYRCC 4 cut(s) 985, 3517, 3691, 4148
AccB7I CCANNNNNTGG 1 cut(s) 144
AccBSI CCGCTC 2 cut(s) 111, 6412
AccI GTMKAC 3 cut(s) 3263, 3939, 4227
AccII CGCG 5 cut(s) 289, 294, 756, 2512, 5475
AclWI GGATC 7 cut(s) 928, 1494, 1649, 1825, 2895, 2908, 6308
AcoI YGGCCR 4 cut(s) 3557, 4909, 6047, 6205
AcvI CACGTG 3 cut(s) 62, 91, 2881
AcyI GRCGYC 4 cut(s) 99, 2052, 3971, 5128
AdeI CACNNNGTG 2 cut(s) 278, 6020
AfiI CCNNNNNNNGG 7 cut(s) 82, 144, 544, 1664, 4175, 4673, 5941
AflII CTTAAG 2 cut(s) 4886, 5687
AflIII ACRYGT 2 cut(s) 1102, 2878
AhdI GACNNNNNGTC 1 cut(s) 1171
AjiI CACGTC 2 cut(s) 5780, 6020
AjnI CCWGG 9 cut(s) 408, 931, 1033, 1986, 3113, 4972, 5915, 6346, 6395
AjuI GAANNNNNNNTTGG 2 cut(s) 213, 245
AleI CACNNNNGTG 1 cut(s) 1766
Alw21I GWGCWC 8 cut(s) 96, 162, 213, 1513, 1534, 2298, 2872, 3678
AlwI GGATC 7 cut(s) 928, 1494, 1649, 1825, 2895, 2908, 6308
AlwNI CAGNNNCTG 3 cut(s) 404, 683, 4620
Ama87I CYCGRG 4 cut(s) 155, 2600, 4994, 5082
ArsI GACNNNNNNTTYG 2 cut(s) 5444, 5476
Asp700I GAANNNNTTC 1 cut(s) 3595
AspLEI GCGC 2 cut(s) 2512, 4752
AsuC2I CCSGG 2 cut(s) 5258, 6193
AsuII TTCGAA 1 cut(s) 1888
AsuNHI GCTAGC 2 cut(s) 1426, 3721
AvaI CYCGRG 4 cut(s) 155, 2600, 4994, 5082
AvaII GGWCC 8 cut(s) 120, 611, 3214, 3385, 5410, 5491, 6162, 6189
AxyI CCTNAGG 1 cut(s) 4323
BaeGI GKGCMC 2 cut(s) 4665, 5785
BalI TGGCCA 2 cut(s) 3559, 4911
BamHI GGATCC 1 cut(s) 2900
BanI GGYRCC 4 cut(s) 985, 3517, 3691, 4148
BanII GRGCYC 2 cut(s) 162, 2298
BarI GAAGNNNNNNTAC 6 cut(s) 1083, 1115, 5811, 5843, 5988, 6020
BauI CACGAG 4 cut(s) 1527, 1533, 6103, 6228
BbrPI CACGTG 3 cut(s) 62, 91, 2881
BbsI GAAGAC 6 cut(s) 654, 720, 1695, 2051, 2055, 5745
Bbv12I GWGCWC 8 cut(s) 96, 162, 213, 1513, 1534, 2298, 2872, 3678
BbvCI CCTCAGC 2 cut(s) 1131, 5213
BceAI ACGGC 3 cut(s) 1212, 1779, 2012
BcgI CGANNNNNNTGC 2 cut(s) 4028, 4062
BciT130I CCWGG 9 cut(s) 410, 933, 1035, 1988, 3115, 4974, 5917, 6348, 6397
BciVI GTATCC 4 cut(s) 1611, 2985, 3000, 5120
BclI TGATCA 3 cut(s) 1039, 3370, 4555
BcnI CCSGG 2 cut(s) 5258, 6193
BfoI RGCGCY 1 cut(s) 4753
BfrI CTTAAG 2 cut(s) 4886, 5687
BfuAI ACCTGC 3 cut(s) 1786, 6077, 6391
BfuI GTATCC 4 cut(s) 1611, 2985, 3000, 5120
BglII AGATCT 1 cut(s) 1696
BlpI GCTNAGC 2 cut(s) 5121, 5823
BmcAI AGTACT 2 cut(s) 2912, 5470
Bme18I GGWCC 8 cut(s) 120, 611, 3214, 3385, 5410, 5491, 6162, 6189
BmeRI GACNNNNNGTC 1 cut(s) 1171
BmeT110I CYCGRG 4 cut(s) 155, 2600, 4994, 5082
BmgBI CACGTC 2 cut(s) 5780, 6020
BmrI ACTGGG 1 cut(s) 1054
BmtI GCTAGC 2 cut(s) 1430, 3725
BmuI ACTGGG 1 cut(s) 1054
BoxI GACNNNNGTC 2 cut(s) 2055, 4198
BpiI GAAGAC 6 cut(s) 654, 720, 1695, 2051, 2055, 5745
BplI GAGNNNNNCTC 4 cut(s) 2114, 2146, 2786, 2818
BpmI CTGGAG 4 cut(s) 1881, 2058, 2856, 4217
Bpu10I CCTNAGC 5 cut(s) 1131, 1386, 2297, 4866, 5213
Bpu1102I GCTNAGC 2 cut(s) 5121, 5823
Bpu14I TTCGAA 1 cut(s) 1888
BpuEI CTTGAG 7 cut(s) 563, 1036, 4444, 4485, 4790, 5921, 5957
BpuMI CCSGG 2 cut(s) 5258, 6193
BsaAI YACGTR 3 cut(s) 62, 91, 2881
BsaBI GATNNNNATC 3 cut(s) 486, 3148, 5640
BsaHI GRCGYC 4 cut(s) 99, 2052, 3971, 5128
BsaI GGTCTC 3 cut(s) 2524, 3504, 4583
BsaJI CCNNGG 9 cut(s) 138, 1433, 1960, 2143, 2736, 4788, 5916, 6050, 6156
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 4555, 4585
Bsc4I CCNNNNNNNGG 7 cut(s) 82, 144, 544, 1664, 4175, 4673, 5941
Bse118I RCCGGY 1 cut(s) 608
Bse21I CCTNAGG 1 cut(s) 4323
Bse3DI GCAATG 5 cut(s) 60, 2889, 3693, 4735, 5094
Bse8I GATNNNNATC 3 cut(s) 486, 3148, 5640
BseBI CCWGG 9 cut(s) 410, 933, 1035, 1988, 3115, 4974, 5917, 6348, 6397
BseDI CCNNGG 9 cut(s) 138, 1433, 1960, 2143, 2736, 4788, 5916, 6050, 6156
BseJI GATNNNNATC 3 cut(s) 486, 3148, 5640
BseLI CCNNNNNNNGG 7 cut(s) 82, 144, 544, 1664, 4175, 4673, 5941
BseMI GCAATG 5 cut(s) 60, 2889, 3693, 4735, 5094
BseRI GAGGAG 3 cut(s) 4015, 4018, 5585
BseSI GKGCMC 2 cut(s) 4665, 5785
BseYI CCCAGC 2 cut(s) 4620, 4849
BsgI GTGCAG 3 cut(s) 825, 1692, 1790
Bsh1236I CGCG 5 cut(s) 289, 294, 756, 2512, 5475
BshNI GGYRCC 4 cut(s) 985, 3517, 3691, 4148
BsiHKAI GWGCWC 8 cut(s) 96, 162, 213, 1513, 1534, 2298, 2872, 3678
BsiHKCI CYCGRG 4 cut(s) 155, 2600, 4994, 5082
BsiSI CCGG 6 cut(s) 609, 983, 2975, 5258, 6193, 6204
BslFI GGGAC 7 cut(s) 1061, 1200, 1886, 2100, 4191, 6175, 6175
BslI CCNNNNNNNGG 7 cut(s) 82, 144, 544, 1664, 4175, 4673, 5941
BsmBI CGTCTC 1 cut(s) 5770
BsmFI GGGAC 7 cut(s) 1061, 1200, 1886, 2100, 4191, 6175, 6175
BsmI GAATGC 4 cut(s) 2335, 3634, 4088, 5706
Bso31I GGTCTC 3 cut(s) 2524, 3504, 4583
BsoBI CYCGRG 4 cut(s) 155, 2600, 4994, 5082
Bsp119I TTCGAA 1 cut(s) 1888
Bsp1407I TGTACA 2 cut(s) 2713, 4841
Bsp1720I GCTNAGC 2 cut(s) 5121, 5823
Bsp19I CCATGG 2 cut(s) 1960, 6156
Bsp68I TCGCGA 1 cut(s) 5475
BspFNI CGCG 5 cut(s) 289, 294, 756, 2512, 5475
BspHI TCATGA 2 cut(s) 2365, 2497
BspMAI CTGCAG 6 cut(s) 1142, 1783, 2401, 2967, 4020, 5139
BspMI ACCTGC 3 cut(s) 1786, 6077, 6391
BspOI GCTAGC 2 cut(s) 1430, 3725
BspPI GGATC 7 cut(s) 928, 1494, 1649, 1825, 2895, 2908, 6308
BspQI GCTCTTC 1 cut(s) 6076
BspT104I TTCGAA 1 cut(s) 1888
BspT107I GGYRCC 4 cut(s) 985, 3517, 3691, 4148
BspTI CTTAAG 2 cut(s) 4886, 5687
BspTNI GGTCTC 3 cut(s) 2524, 3504, 4583
BsrBI CCGCTC 2 cut(s) 111, 6412
BsrDI GCAATG 5 cut(s) 60, 2889, 3693, 4735, 5094
BsrFI RCCGGY 1 cut(s) 608
BsrGI TGTACA 2 cut(s) 2713, 4841
BssAI RCCGGY 1 cut(s) 608
BssECI CCNNGG 9 cut(s) 138, 1433, 1960, 2143, 2736, 4788, 5916, 6050, 6156
BssNAI GTATAC 1 cut(s) 3940
BssNI GRCGYC 4 cut(s) 99, 2052, 3971, 5128
BssSI CACGAG 4 cut(s) 1527, 1533, 6103, 6228
BssT1I CCWWGG 6 cut(s) 138, 1433, 1960, 2736, 4788, 6156
Bst1107I GTATAC 1 cut(s) 3940
Bst2BI CACGAG 4 cut(s) 1527, 1533, 6103, 6228
Bst2UI CCWGG 9 cut(s) 410, 933, 1035, 1988, 3115, 4974, 5917, 6348, 6397
Bst4CI ACNGT 8 cut(s) 724, 1331, 2671, 2867, 3003, 3204, 4232, 6175
Bst6I CTCTTC 7 cut(s) 1014, 1722, 2562, 3507, 5443, 5796, 6076
BstACI GRCGYC 4 cut(s) 99, 2052, 3971, 5128
BstAFI CTTAAG 2 cut(s) 4886, 5687
BstAPI GCANNNNNTGC 3 cut(s) 2806, 4478, 5234
BstAUI TGTACA 2 cut(s) 2713, 4841
BstBAI YACGTR 3 cut(s) 62, 91, 2881
BstBI TTCGAA 1 cut(s) 1888
BstDSI CCRYGG 4 cut(s) 1960, 2143, 6050, 6156
BstENI CCTNNNNNAGG 1 cut(s) 1662
BstFNI CGCG 5 cut(s) 289, 294, 756, 2512, 5475
BstH2I RGCGCY 1 cut(s) 4753
BstHHI GCGC 2 cut(s) 2512, 4752
BstNI CCWGG 9 cut(s) 410, 933, 1035, 1988, 3115, 4974, 5917, 6348, 6397
BstNSI RCATGY 6 cut(s) 1106, 1385, 1398, 1864, 3729, 5612
BstPAI GACNNNNGTC 2 cut(s) 2055, 4198
BstSLI GKGCMC 2 cut(s) 4665, 5785
BstUI CGCG 5 cut(s) 289, 294, 756, 2512, 5475
BstV2I GAAGAC 6 cut(s) 654, 720, 1695, 2051, 2055, 5745
BstX2I RGATCY 4 cut(s) 1486, 1696, 2900, 6313
BstXI CCANNNNNNTGG 3 cut(s) 1034, 2737, 4159
BstYI RGATCY 4 cut(s) 1486, 1696, 2900, 6313
BstZ17I GTATAC 1 cut(s) 3940
Bsu36I CCTNAGG 1 cut(s) 4323
BsuI GTATCC 4 cut(s) 1611, 2985, 3000, 5120
BtgI CCRYGG 4 cut(s) 1960, 2143, 6050, 6156
BtgZI GCGATG 2 cut(s) 3060, 3765
BtrI CACGTC 2 cut(s) 5780, 6020
BtsI GCAGTG 4 cut(s) 1089, 1773, 2831, 6259
BtuMI TCGCGA 1 cut(s) 5475
BveI ACCTGC 3 cut(s) 1786, 6077, 6391
CaiI CAGNNNCTG 3 cut(s) 404, 683, 4620
CciI TCATGA 2 cut(s) 2365, 2497
CfoI GCGC 2 cut(s) 2512, 4752
Cfr10I RCCGGY 1 cut(s) 608
CseI GACGC 6 cut(s) 107, 300, 1110, 2060, 3960, 4505
CspCI CAANNNNNGTGG 2 cut(s) 2984, 3019
DraIII CACNNNGTG 2 cut(s) 278, 6020
DriI GACNNNNNGTC 1 cut(s) 1171
EaeI YGGCCR 4 cut(s) 3557, 4909, 6047, 6205
Eam1104I CTCTTC 7 cut(s) 1014, 1722, 2562, 3507, 5443, 5796, 6076
Eam1105I GACNNNNNGTC 1 cut(s) 1171
EarI CTCTTC 7 cut(s) 1014, 1722, 2562, 3507, 5443, 5796, 6076
Ecl136II GAGCTC 2 cut(s) 160, 2296
Eco130I CCWWGG 6 cut(s) 138, 1433, 1960, 2736, 4788, 6156
Eco147I AGGCCT 1 cut(s) 4253
Eco24I GRGCYC 2 cut(s) 162, 2298
Eco31I GGTCTC 3 cut(s) 2524, 3504, 4583
Eco32I GATATC 3 cut(s) 5269, 5593, 5875
Eco47I GGWCC 8 cut(s) 120, 611, 3214, 3385, 5410, 5491, 6162, 6189
Eco53kI GAGCTC 2 cut(s) 160, 2296
Eco72I CACGTG 3 cut(s) 62, 91, 2881
Eco81I CCTNAGG 1 cut(s) 4323
Eco88I CYCGRG 4 cut(s) 155, 2600, 4994, 5082
EcoICRI GAGCTC 2 cut(s) 160, 2296
EcoNI CCTNNNNNAGG 1 cut(s) 1662
EcoO109I RGGNCCY 3 cut(s) 5410, 5491, 6189
EcoRI GAATTC 2 cut(s) 2845, 4337
EcoRII CCWGG 9 cut(s) 408, 931, 1033, 1986, 3113, 4972, 5915, 6346, 6395
EcoRV GATATC 3 cut(s) 5269, 5593, 5875
EcoT14I CCWWGG 6 cut(s) 138, 1433, 1960, 2736, 4788, 6156
EcoT22I ATGCAT 3 cut(s) 2811, 5065, 5614
EcoT38I GRGCYC 2 cut(s) 162, 2298
ErhI CCWWGG 6 cut(s) 138, 1433, 1960, 2736, 4788, 6156
Esp3I CGTCTC 1 cut(s) 5770
FalI AAGNNNNNCTT 4 cut(s) 4708, 4740, 5507, 5539
FaqI GGGAC 7 cut(s) 1061, 1200, 1886, 2100, 4191, 6175, 6175
FauI CCCGC 3 cut(s) 76, 5759, 5792
FauNDI CATATG 1 cut(s) 946
FbaI TGATCA 3 cut(s) 1039, 3370, 4555
FblI GTMKAC 3 cut(s) 3263, 3939, 4227
FriOI GRGCYC 2 cut(s) 162, 2298
GlaI GCGC 2 cut(s) 2511, 4751
GsaI CCCAGC 2 cut(s) 4624, 4853
GsuI CTGGAG 4 cut(s) 1881, 2058, 2856, 4217
HaeII RGCGCY 1 cut(s) 4753
HapII CCGG 6 cut(s) 609, 983, 2975, 5258, 6193, 6204
HgaI GACGC 6 cut(s) 107, 300, 1110, 2060, 3960, 4505
HhaI GCGC 2 cut(s) 2512, 4752
Hin1I GRCGYC 4 cut(s) 99, 2052, 3971, 5128
Hin6I GCGC 2 cut(s) 2510, 4750
HinP1I GCGC 2 cut(s) 2510, 4750
HincII GTYRAC 3 cut(s) 436, 780, 4543
HindII GTYRAC 3 cut(s) 436, 780, 4543
HindIII AAGCTT 4 cut(s) 893, 2754, 3453, 4370
HpaI GTTAAC 1 cut(s) 436
HpaII CCGG 6 cut(s) 609, 983, 2975, 5258, 6193, 6204
Hpy99I CGWCG 6 cut(s) 101, 294, 3003, 4384, 5130, 6021
HpyCH4III ACNGT 8 cut(s) 724, 1331, 2671, 2867, 3003, 3204, 4232, 6175
HpyCH4IV ACGT 9 cut(s) 61, 90, 274, 589, 2469, 2880, 5128, 5779, 6019
HpySE526I ACGT 9 cut(s) 61, 90, 274, 589, 2469, 2880, 5128, 5779, 6019
Hsp92I GRCGYC 4 cut(s) 99, 2052, 3971, 5128
HspAI GCGC 2 cut(s) 2510, 4750
KflI GGGWCCC 1 cut(s) 6189
Ksp22I TGATCA 3 cut(s) 1039, 3370, 4555
KspAI GTTAAC 1 cut(s) 436
LguI GCTCTTC 1 cut(s) 6076
MaeII ACGT 9 cut(s) 61, 90, 274, 589, 2469, 2880, 5128, 5779, 6019
MbiI CCGCTC 2 cut(s) 111, 6412
MfeI CAATTG 3 cut(s) 1275, 4476, 5207
MflI RGATCY 4 cut(s) 1486, 1696, 2900, 6313
MlsI TGGCCA 2 cut(s) 3559, 4911
MluNI TGGCCA 2 cut(s) 3559, 4911
MmeI TCCRAC 6 cut(s) 2293, 2595, 2949, 3155, 4376, 6289
Mox20I TGGCCA 2 cut(s) 3559, 4911
Mph1103I ATGCAT 3 cut(s) 2811, 5065, 5614
MroXI GAANNNNTTC 1 cut(s) 3595
MscI TGGCCA 2 cut(s) 3559, 4911
MslI CAYNNNNRTG 4 cut(s) 1347, 1578, 1766, 4207
Msp20I TGGCCA 2 cut(s) 3559, 4911
MspA1I CMGCKG 7 cut(s) 653, 706, 1336, 2906, 3247, 5156, 5858
MspCI CTTAAG 2 cut(s) 4886, 5687
MspI CCGG 6 cut(s) 609, 983, 2975, 5258, 6193, 6204
MunI CAATTG 3 cut(s) 1275, 4476, 5207
Mva1269I GAATGC 4 cut(s) 2335, 3634, 4088, 5706
MvaI CCWGG 9 cut(s) 410, 933, 1035, 1988, 3115, 4974, 5917, 6348, 6397
MvnI CGCG 5 cut(s) 289, 294, 756, 2512, 5475
NciI CCSGG 2 cut(s) 5258, 6193
NcoI CCATGG 2 cut(s) 1960, 6156
NdeI CATATG 1 cut(s) 946
NheI GCTAGC 2 cut(s) 1426, 3721
NmuCI GTSAC 7 cut(s) 57, 400, 940, 1122, 1571, 4200, 6020
NruI TCGCGA 1 cut(s) 5475
NsiI ATGCAT 3 cut(s) 2811, 5065, 5614
NspI RCATGY 6 cut(s) 1106, 1385, 1398, 1864, 3729, 5612
NspV TTCGAA 1 cut(s) 1888
OliI CACNNNNGTG 1 cut(s) 1766
PaeR7I CTCGAG 2 cut(s) 155, 2600
PagI TCATGA 2 cut(s) 2365, 2497
PceI AGGCCT 1 cut(s) 4253
PciI ACATGT 1 cut(s) 1102
PciSI GCTCTTC 1 cut(s) 6076
PcsI WCGNNNNNNNCGW 3 cut(s) 162, 334, 6013
PctI GAATGC 4 cut(s) 2335, 3634, 4088, 5706
PdmI GAANNNNTTC 1 cut(s) 3595
PflFI GACNNNGTC 2 cut(s) 2655, 5744
PflMI CCANNNNNTGG 1 cut(s) 144
PmaCI CACGTG 3 cut(s) 62, 91, 2881
PmlI CACGTG 3 cut(s) 62, 91, 2881
Ppu21I YACGTR 3 cut(s) 62, 91, 2881
PpuMI RGGWCCY 3 cut(s) 5410, 5491, 6189
PscI ACATGT 1 cut(s) 1102
PshAI GACNNNNGTC 2 cut(s) 2055, 4198
PsiI TTATAA 1 cut(s) 2276
Psp124BI GAGCTC 2 cut(s) 162, 2298
Psp5II RGGWCCY 3 cut(s) 5410, 5491, 6189
Psp6I CCWGG 9 cut(s) 408, 931, 1033, 1986, 3113, 4972, 5915, 6346, 6395
PspCI CACGTG 3 cut(s) 62, 91, 2881
PspFI CCCAGC 2 cut(s) 4620, 4849
PspGI CCWGG 9 cut(s) 408, 931, 1033, 1986, 3113, 4972, 5915, 6346, 6395
PspPPI RGGWCCY 3 cut(s) 5410, 5491, 6189
PspXI VCTCGAGB 1 cut(s) 2600
PsrI GAACNNNNNNTAC 6 cut(s) 570, 602, 2930, 2962, 5598, 5630
PstI CTGCAG 6 cut(s) 1142, 1783, 2401, 2967, 4020, 5139
PstNI CAGNNNCTG 3 cut(s) 404, 683, 4620
PsuI RGATCY 4 cut(s) 1486, 1696, 2900, 6313
PsyI GACNNNGTC 2 cut(s) 2655, 5744
PvuII CAGCTG 4 cut(s) 653, 706, 3247, 5858
RruI TCGCGA 1 cut(s) 5475
RseI CAYNNNNRTG 4 cut(s) 1347, 1578, 1766, 4207
SacI GAGCTC 2 cut(s) 162, 2298
SapI GCTCTTC 1 cut(s) 6076
ScaI AGTACT 2 cut(s) 2912, 5470
Sfr274I CTCGAG 2 cut(s) 155, 2600
SfuI TTCGAA 1 cut(s) 1888
SinI GGWCC 8 cut(s) 120, 611, 3214, 3385, 5410, 5491, 6162, 6189
SlaI CTCGAG 2 cut(s) 155, 2600
SmiMI CAYNNNNRTG 4 cut(s) 1347, 1578, 1766, 4207
SseBI AGGCCT 1 cut(s) 4253
SspI AATATT 2 cut(s) 2243, 5302
SstI GAGCTC 2 cut(s) 162, 2298
StuI AGGCCT 1 cut(s) 4253
StyI CCWWGG 6 cut(s) 138, 1433, 1960, 2736, 4788, 6156
TaaI ACNGT 8 cut(s) 724, 1331, 2671, 2867, 3003, 3204, 4232, 6175
TaiI ACGT 9 cut(s) 64, 93, 277, 592, 2472, 2883, 5131, 5782, 6022
TatI WGTACW 7 cut(s) 2713, 2910, 3204, 4455, 4651, 4841, 5468
TauI GCSGC 2 cut(s) 759, 5153
TseFI GTSAC 7 cut(s) 57, 400, 940, 1122, 1571, 4200, 6020
Tsp45I GTSAC 7 cut(s) 57, 400, 940, 1122, 1571, 4200, 6020
TspGWI ACGGA 5 cut(s) 791, 1221, 2649, 3074, 5470
Tth111I GACNNNGTC 2 cut(s) 2655, 5744
Van91I CCANNNNNTGG 1 cut(s) 144
Vha464I CTTAAG 2 cut(s) 4886, 5687
VpaK11BI GGWCC 8 cut(s) 120, 611, 3214, 3385, 5410, 5491, 6162, 6189
XagI CCTNNNNNAGG 1 cut(s) 1662
XbaI TCTAGA 2 cut(s) 1480, 3140
XceI RCATGY 6 cut(s) 1106, 1385, 1398, 1864, 3729, 5612
XcmI CCANNNNNNNNNTGG 7 cut(s) 2150, 3111, 4743, 4919, 6154, 6172, 6403
XhoI CTCGAG 2 cut(s) 155, 2600
XmiI GTMKAC 3 cut(s) 3263, 3939, 4227
XmnI GAANNNNTTC 1 cut(s) 3595
ZraI GACGTC 1 cut(s) 5129
ZrmI AGTACT 2 cut(s) 2912, 5470
Zsp2I ATGCAT 3 cut(s) 2811, 5065, 5614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.