Rh1CG154900

isoform X1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
34210593 .. 34227562
16970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG154900.1

Sequence Viewer

Length: 6444 bp
ATGGAGGTAGAGTTCGAAGCGAGAGTGAAGCCTCTCGAGTACAAAGTGAAGGCAATGTCACGTGAGTCCCCGTCGCAGAAGGCCGGTCACGTGCTCGACGCCGACCTCCGCTCTCACTGGTCCACCGCCACCAACACCAAGGAGTGGATCCTCCTCGAACTCAACGAACCTTGCTTGTTATCTCACATCAGAATCTACAACAAGTCTGTCCTCGAATGGGAAATCTCTGTTGGCTTGCGTTACAAGCCAGAGACGTTTGTAAAGGTACGCCCGCGTTGTGAAGCGCCGCGGCGGGATATGGTGTATCCCACGAACTACACCCCGTGCCGCTATGTGCGAATATCTTGTTTGAGGGGGAATCCCATTGCCATTTTCTTCATACAGCTTATTGGGGTTTCAGTGACTGGACTGGAACCAGAATTTCAACCGGTTGTTAACCACTTGTTACCATCTATTATATCTCACAAACAAGATGCTCATGATATGCATCTTCAGTTGCTTAAAGACATGGCAAGTCGGTTGCTTGTGTTCCTTCCCCAACTTGAGGCAGATCTTAACAGCTTCGTGGATGCTCCTGAACCAAACTTACGTTTTCTTGCTATGCTTGCTGGCCCATTTTATCCAATACTTGATCTTGGCAAAGAAAGGGCAACTGCAAAGTCTTCAGGCAATATCTCAGACTTTGAAGTTTCTAAAAACAGTCAGCCATCATCATCCTTAACCGTGTCCTCTAACTTTGAGCCACGTAGATCACGCACCACAGCACCTTTTGTTCTGTCCACATCAAGTTCTATAGTATTTCGTGCAGATGCAATCTTTGTGCTGTTGAGAAAGGCATATAAAGATTCTGATCTGGGAATTGTTTGCAGAAAGGCTTCTAGGATTCTGCATAGGCTTATAGAGCCTGTTACAGTACGTGAAGGATCAGCATCTCCTGATGAAGTGACATCTGGAGATGAAGCATCAAAATCAGAGATAACAAATCCGGCTCCTTTAGTTGATTACTCAAACTTGTTTGGGGAAGACTTCCAGTTGCCTGATGATCACTGGGATTCAAGCTACCTTAACATCTTGGATATAGGAGCAGTGGAGGAAGGGATTTTACATGTACTTTATGCTTGTGCGTCACAGCCACTTCTCTGCAGCAAATTAGCAGATAGGACATCTGACCTTTGGTCCGCATTACCGCTACTTCAATCATTGCTACCAGCACTTCGTCCCTCGTCAAGCCGTCCTTCTGACATTGTTGATGATAGTTTCACTCAATGGAGACAACCAATTGTGCAACAAGCCCTATCTCAGATTGTAGCAACATCATCTTCATTATTATACCGTCCACTTCTCCATGCCTGTGCTGGCTATTTATCGTCATTTTCGCCTTCACATGCTAAGGCAGCATGTGTTTTGATCGATCTGTGTTGTAGTGCACTAGCACCCTGGCTTACTCAAGTGATTGCAAAGGTTGATCTGGCTGTAGAGCTTCTAGAGGATCTGTTGGGCGTAATTCAGGGTGCTCGACATTACCTGGCTCGTGCTCGTGCTGCAATAAAATACATCATTCTGGCTATCTCTGGTCATATGGATGATATCCTGGGAAAGTATAAGGAAGTTAAGCACAAGATACTGTTTCTTTTAGAGATGCTAGAGCCATTCCTTGATCCCGCTGTAGGCAGATTTAAGGGTAAAATAGCCTTTGGAGACCTATCTTCTGCATATCCAGAAAAACAGGAACGGAATTGTGCTATTGCTATTAATGTGATCCGTATGGCAGTGCAGAAACCAGCAGTTCTTCCTTCACTGGAATCTGAATGGAGGCGTGGATCAGTTGCTCCTAGCGTACTACTCTCGATATTGGAACCTCACATGCAGTTACCTCCTGAAATTGACCTTCGCATATCTCCTGTCCCCAGACCACTGGAACTTGAACCTTCATCTGGTTTATCTCCTCCTGCAGTTTCTCACCATGGGATAGCTTCTTCAAAATCAAACAGTCAGGATGAATCTGATGGGAAGACAGATGAAACATCTGTAAAAATGGACATTTTAGAAGATGCCAGTCTTCTATTTGCTCCTCCGGAACTGCATAATATAGTACTGACAAATATGTTTAGTGGTCCAAATGAGCATAATTCTGTTGCTAACCTTGGGGATGTTGGCTCTGAACAAAAACATGGGGTTAGGAAAAGTTTTCCATATCAGTTTCCTAGTGACTTCAAACTAGATTCTGGTTTTTCTGTGGAATACTTCAACTTGCAAGCAGATTATTTCCAACTTATAAGTTATCAAGACTGTGAGCTCAGGGCTTCTGAATTTCGCCGTTTGGCCTCAGATTTACATTCACAGAATGAGATCACTGTTGAGAGTCATGATGCTGCTATAGATGCTTTGCTCTTGGCTGCAGAGTGTTATGTAAATCCATTTTTTATGATGTCTTTCAGAGGCAGTCCAAAGTTGATGAACGATAGAAACACCGGTGGGATTAGGATCCCACCAAATCATGGAAGTTTGGAGCTGAAAATGGTCTCTGGAAAGTCTAAGAGTGACCTAGAAACAATAGCTGTTCTTGAAAGTAAAAGAGACAAAGTTGTTCTTCAAACTCTGCTTGAGGCTGCAGAGTTAGATAAGAAGTATCAAGAAAAGATATCAGATGGAAGTTGCAGTCCATACGACACTGTAGGATGTGATGAAGAAGTGATTAAGTTGTCTTCCTTTGATGTACAAGCTGCAGATGCCATCACCTTGGTTCGGCAAAATCAAGCTTTGTTGTGCAGCTTTCTGGTTCAAAGATTGCAAAGGGAGCAACACTCAATGCATGAAATTCTTATGCAGTGTTTGATATTTTTGTTGAACTCTGCTACAAAGTTATACTGTGTTCCAGAACATGTGATTGACATTGCATTAGGATCTGCTGAGTACTTAAATGGGATGCTAACATCCCTTTATTATCAGTTTAAAGAAAGCAATATGCAGTTGGAGCCAGAGACGGTACATGGGATACAACGTCGGTGGATACTGCTTCAAAGACTGGTAATATCTGCAAGTTCTGGCGATGAGGGGATGGATTTTGCAATCAATAAAAATGGTTTCCGTTATGGAAATTTGATTCCACCTTCAGCCTGGATGCAGAGAATATCAACATTTTCCAGATCCACATCCCCTCTTGTTCGATTTCTTGGTTGGATGGCAGTATCTCGTAATGCAAGACAATATATAAAGGACAGGCTTCTTCTTGCTTTGGATCTACCACAGCTGACTTGTCTTTTATCTATATTTGCAGATGAGCTCTCTGCAGTAGACAATGTTGTCAATCGAAAATATGAAGAATCAGGGGGAGGAACTGTTTCTTCTGTCAGTACAGGATTTGAAGTTGCTGATCAGGACCAATCTTTTCGTGTCATCTACCCTGATCTCTACAAGTTCTTTCCTAATATGAAGACACAATTTGAAGCTTTTGGAGAAACCATTTTGGAGGCTGTTGGGTTGCAGTTGAGGTTCATTTCTTCCAGTATGGTACCTGATATATTATGTTGGTTTTCTGAGTTGTGTTCATGGCCATTTCTCTATACAGAGCAGGTTTCTGCTCGAAATAGTTCTGATCATTTGAAAGGTTATGCTTTAAAAAATGCCAAAGCAATCATCCTTTATATACTTGAGGCCATTGTAACTGAGCACATGGAAGCAATGGTTCCTGAGATACCTAGAGTGGTGCAACTTCTGGCATCCCTTTGTAGAGCATCTTATTGTGATGTATCTTTTCTGGATTCTGTATTGTGTTTGTTGAAACCAATCATCTCATACTCTTTATGTAAGTTGTCCGACGAGGAAAGATTGTTGGTGGATGGTTCATGTGTTAATTTTGAGTCCTTATGCTTTGATGAGCTTTTCAGTAACATCAGACTGGTTATGAACCAGGATGAGTCTACAGCAAAAGAATACAACAGAGGACTGACAATTTTCATTTTGGCTTCTGTCTTTCCTGATATATCTGCTCAACGTAGGAAGGAAATATTGCAGTCCTTAATGCTTTGGGCTGATTTTACTGCATTTGAGCCTACTTCTTCTTTCCACAATTACCTTTGTGCATTCCAGAGTGTCATGGAGAGCTGCAAGCTTCTGTTAGTTCAGACTTTACAATTCTTTGGTGCCATCCCACTTCAGCTTCCCACTGATGGACCACATGACAGTAGTTTGGAGTCACATTCATGGTTCCTCAGCGATTTGCACCACACTTCACTTCCAGATATGGTCTCCGAGAAGTTAGAAAGTTCTGGTGGTAATATTGTGAATAATAAGGTTTATCTTTTATCTCACGAGGAGATAGAAGAATTCTCAAAACACTTGGGAGTTCTCATTGTTAAGCTTTATTCTACAGTTGAGCTTTGTTGGAATCTTCATCATCAACTAGCTAAGAAGATAACTATTACATCTACAGAGTGTTTTATGTACTCAAGATGCTTGGCATCAATAGCGGAAAGAGTTGATGGTGCTCAAGAAAATGACTCAGAAATCTCTTTTCCATCTAAGCCAGTTGATGAATTCCTTGTTCCTTGGATCTTTGGTCTAGAAGCAATTTCTGAAACCATTTTGACCCTTCAAGAAAACAGATGCTGGGAAGTTTCATCTGTTATGCTTGATTGTGTACTTGCAGTGCCTCATAAATTTGGCCTTACCAATGTGATTGGCATCGTTTGTTCTGCAATAAAAAATAGTTCTTTCAATGCACCAAAAATTGCTTGGCGTCTGCAGAGTCATAAATGGTTATCGATGTTACTCGACAGAGGCCTTCATTCCCTCAAGGAATGTGAGGTTCCTCTCGTTAATTTGTTCTGTACAATGCTGGGTCATCCTGAACCTGAGCAACGGACTATAGCACTACAGATTTTAGGCAAAGTTGTTGGCCAAGATTTGAGTGGAGGAGCAGAGCTACAGCCTTCCTTATTGCACAGACAATTAGTTTCACCTGGCTTAGTTATATCTGTTTCTGAGTCGACTATTACTAATTTGGTTTCAAGTACGTGGGATCTGGTTGTTGTGCTGGCATCATCCGATGCATCACTTCTTGTAAAGACTCGTGCAATGGCACTTCTTGTTGATTATATCCCATTTGCTGAACGACGTCTATTACAGTCTTTGCTTGGGGCAGCAGATAGTGTTCATGGATTGGGAATGCTTGCCCATCCAAACTGTGAGGGACCCTTGGTGAGGCTTTCATTAGCACTGATAGCTGGTGCTTGCCTCTACTGTCCAGATGAAGATATCTCTCTGATTCCTGAAAATGTTTGGAAGAATATTGAGACTCTAGCAATGTCGAAATCTGATGGCAGGCTTGGAGATGTTGAGAAAAGAGCTTGCCAAGTATTATGTAGGTTGAGAGCTGAAGGTGATGAAGCTAAACAGGTCCTGAGAGAAGTGCTCTCAACAAGTTCTTCGAAACAAGTTGACCCAGATTTTGAAAGTACTCGTGAATCTGTTCTTCAGGTCCTTGCCAGCTTAACTTCTGCAAAGTCATACTTTGATATTTTCTCGAATAAAATTGACCAAGAGGTTATGGAAGTGGAGGAGGCTGAATTAGAGTTGGACATTCTTCAGAAAGAAGATGCATTGCAAGAATCACCTAAAGATACCAAAGATAAAGACCAGATTCCTTCCCTAAGCTCTCCTCTGAAAGATAATGCGCGCCTGCAGCAAATCAAGGATTGCATTCATTCCTTAGAAATCTCCAAGCTCCGTGAAGACATCGTCACACGCAGGCAGAAAAAACTTCTTATGAGACGTGACCGTCAGAAATATTTGGAAGAAGCAGCTTTACGAGAAGCTCAACTACTTCAAGAACTTGATAGGGAGAGAGCAGCTGAAGTGGAAAAGGATATCGAGAGACAGCGATTGGTAGAACTTGAGCGTGCAAAAACCAGGGAGCTGCGACAAAACCTTGAAATGGAGAAGGAAAGGCTAGCACAGAGAGATCTTCAGCGTGAATTGGAGCAAGCTGAAGCAGGTGTGCGACCGTCACGACGCGACTTTTCTTCCACTTACAGTAGTCGGCCCCGAGATCGGTATCGTGAAAGAGAAAACGGAAGAGCAGGTAATGAAGGTAGTGCAAGATCAAGCAATGCGCAGCTTGAAAGTTCATCCATGGGGACAATACCAACTGTGGTTCTGTCTGGTTCTCGGACATTTTCTGGGCAGCTGCCTACCATTTTACAGTCACGTGATCGTCTGGATGATGCTGGCAGTGGTTATGAAGAAAATCTGGATGGAAGCAAGGACTCTGGTGATACGGGTAGTGTTGGAGATCCAGACTCTTTGTCAGCATTTGATGGACAGCCTGGTGGATTTGGCTCAGGCCAGAGGCATGGTTCTAGAGGGAGCAAATCCAGGCAGGTGGTGGAACGGAGGGAAAGGGACGGTAGACGAGAAGGAAAGTGGGAAAGAAAACATTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2147

Amino Acids

240.1

Weight (kDa)

5.44

Isoelectric Point (pI)

49.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2276
AarI CACCTGC 2 cut(s) 5984, 6370
AasI GACNNNNNNGTC 2 cut(s) 3302, 5778
AatII GACGTC 1 cut(s) 5119
Acc16I TGCGCA 1 cut(s) 6114
Acc36I ACCTGC 4 cut(s) 3562, 5984, 6071, 6370
Acc65I GGTACC 1 cut(s) 3511
AccB1I GGYRCC 2 cut(s) 3511, 4142
AccB7I CCANNNNNTGG 2 cut(s) 144, 2498
AccBSI CCGCTC 1 cut(s) 111
AccI GTMKAC 4 cut(s) 3294, 3920, 4988, 6409
AccII CGCG 4 cut(s) 274, 289, 5677, 6015
AccIII TCCGGA 1 cut(s) 2074
AcoI YGGCCR 2 cut(s) 3551, 4897
AcsI RAATTY 7 cut(s) 419, 2309, 2817, 3097, 4325, 4535, 4658
AcvI CACGTG 3 cut(s) 62, 91, 6209
AcyI GRCGYC 3 cut(s) 99, 4738, 5116
AdeI CACNNNGTG 1 cut(s) 324
AflIII ACRYGT 2 cut(s) 1105, 2881
AgeI ACCGGT 2 cut(s) 427, 2471
AhdI GACNNNNNGTC 2 cut(s) 1174, 6304
AjiI CACGTC 1 cut(s) 5774
AjnI CCWGG 9 cut(s) 1436, 1524, 1590, 3116, 3909, 4960, 5909, 6325, 6374
AjuI GAANNNNNNNTTGG 2 cut(s) 213, 245
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 9 cut(s) 96, 1429, 1516, 1537, 2298, 3285, 3672, 4489, 5415
Alw44I GTGCAC 1 cut(s) 1425
AlwNI CAGNNNCTG 3 cut(s) 404, 4608, 5401
Ama87I CYCGRG 2 cut(s) 35, 6045
Aor13HI TCCGGA 1 cut(s) 2074
ApaLI GTGCAC 1 cut(s) 1425
ApoI RAATTY 7 cut(s) 419, 2309, 2817, 3097, 4325, 4535, 4658
ArsI GACNNNNNNTTYG 2 cut(s) 5432, 5464
AseI ATTAAT 1 cut(s) 1752
AsiGI ACCGGT 2 cut(s) 427, 2471
Asp700I GAANNNNTTC 4 cut(s) 874, 3340, 3589, 5469
Asp718I GGTACC 1 cut(s) 3511
AspLEI GCGC 4 cut(s) 286, 5677, 5679, 6115
AsuHPI GGTGA 7 cut(s) 1952, 2728, 4950, 5212, 5393, 5604, 6284
AsuII TTCGAA 2 cut(s) 15, 5429
AsuNHI GCTAGC 1 cut(s) 5950
AvaI CYCGRG 2 cut(s) 35, 6045
AvaII GGWCC 8 cut(s) 120, 1176, 2114, 3379, 4172, 5192, 5398, 5479
BaeGI GKGCMC 1 cut(s) 1429
BalI TGGCCA 2 cut(s) 3553, 4899
BamHI GGATCC 2 cut(s) 147, 2484
BanI GGYRCC 2 cut(s) 3511, 4142
BanII GRGCYC 2 cut(s) 2298, 3285
BarI GAAGNNNNNNTAC 6 cut(s) 1086, 1118, 5790, 5805, 5822, 5837
BauI CACGAG 5 cut(s) 1530, 1536, 4310, 5070, 5460
BbrPI CACGTG 3 cut(s) 62, 91, 6209
BbsI GAAGAC 7 cut(s) 654, 1029, 2018, 2051, 2697, 3440, 5739
Bbv12I GWGCWC 9 cut(s) 96, 1429, 1516, 1537, 2298, 3285, 3672, 4489, 5415
BbvCI CCTCAGC 1 cut(s) 4211
BceAI ACGGC 2 cut(s) 1215, 2301
BciT130I CCWGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
BciVI GTATCC 3 cut(s) 315, 2988, 3003
BclI TGATCA 3 cut(s) 1042, 3373, 3595
BfoI RGCGCY 1 cut(s) 287
BfuAI ACCTGC 4 cut(s) 3562, 5984, 6071, 6370
BfuI GTATCC 3 cut(s) 315, 2988, 3003
BglII AGATCT 2 cut(s) 550, 5962
BmcAI AGTACT 3 cut(s) 2094, 2915, 5458
Bme1390I CCNGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
Bme18I GGWCC 8 cut(s) 120, 1176, 2114, 3379, 4172, 5192, 5398, 5479
BmeRI GACNNNNNGTC 2 cut(s) 1174, 6304
BmeT110I CYCGRG 2 cut(s) 35, 6045
BmgBI CACGTC 1 cut(s) 5774
BmrFI CCNGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
BmrI ACTGGG 1 cut(s) 1057
BmtI GCTAGC 1 cut(s) 5954
BmuI ACTGGG 1 cut(s) 1057
BpiI GAAGAC 7 cut(s) 654, 1029, 2018, 2051, 2697, 3440, 5739
BplI GAGNNNNNCTC 4 cut(s) 2789, 2821, 5397, 5429
BpmI CTGGAG 1 cut(s) 972
Bpu10I CCTNAGC 6 cut(s) 1389, 2297, 4211, 4854, 5651, 6340
Bpu14I TTCGAA 2 cut(s) 15, 5429
BpuEI CTTGAG 8 cut(s) 563, 1431, 2624, 3671, 4432, 4473, 4778, 5915
Bsa29I ATCGAT 2 cut(s) 1410, 4763
BsaAI YACGTR 6 cut(s) 62, 91, 746, 917, 5016, 6209
BsaBI GATNNNNATC 7 cut(s) 486, 849, 928, 2483, 3151, 4682, 6054
BsaHI GRCGYC 3 cut(s) 99, 4738, 5116
BsaI GGTCTC 3 cut(s) 1692, 2527, 4252
BsaWI WCCGGW 3 cut(s) 427, 2074, 2471
BsaXI ACNNNNNCTCC 3 cut(s) 26, 3324, 3354
Bse118I RCCGGY 3 cut(s) 83, 427, 2471
Bse3DI GCAATG 9 cut(s) 60, 363, 1199, 2892, 3687, 5082, 5310, 5600, 6115
Bse8I GATNNNNATC 7 cut(s) 486, 849, 928, 2483, 3151, 4682, 6054
BseAI TCCGGA 1 cut(s) 2074
BseBI CCWGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
BseCI ATCGAT 2 cut(s) 1410, 4763
BseJI GATNNNNATC 7 cut(s) 486, 849, 928, 2483, 3151, 4682, 6054
BseMI GCAATG 9 cut(s) 60, 363, 1199, 2892, 3687, 5082, 5310, 5600, 6115
BsePI GCGCGC 1 cut(s) 5675
BseRI GAGGAG 7 cut(s) 143, 1935, 2061, 4328, 4929, 5573, 5649
BseSI GKGCMC 1 cut(s) 1429
BseYI CCCAGC 2 cut(s) 4608, 4837
BsgI GTGCAG 3 cut(s) 825, 1793, 2788
Bsh1236I CGCG 4 cut(s) 274, 289, 5677, 6015
Bsh1285I CGRYCG 1 cut(s) 6005
BshNI GGYRCC 2 cut(s) 3511, 4142
BshTI ACCGGT 2 cut(s) 427, 2471
BshVI ATCGAT 2 cut(s) 1410, 4763
BsiEI CGRYCG 1 cut(s) 6005
BsiHKAI GWGCWC 9 cut(s) 96, 1429, 1516, 1537, 2298, 3285, 3672, 4489, 5415
BsiHKCI CYCGRG 2 cut(s) 35, 6045
BsiSI CCGG 5 cut(s) 84, 428, 986, 2075, 2472
BslFI GGGAC 6 cut(s) 52, 1203, 1889, 5205, 6151, 6416
BsmBI CGTCTC 3 cut(s) 245, 2975, 5764
BsmFI GGGAC 6 cut(s) 52, 1203, 1889, 5205, 6151, 6416
BsmI GAATGC 3 cut(s) 4082, 5172, 5700
Bso31I GGTCTC 3 cut(s) 1692, 2527, 4252
BsoBI CYCGRG 2 cut(s) 35, 6045
Bsp119I TTCGAA 2 cut(s) 15, 5429
Bsp1286I GDGCHC 9 cut(s) 96, 1429, 1516, 1537, 2298, 3285, 3672, 4489, 5415
Bsp13I TCCGGA 1 cut(s) 2074
Bsp1407I TGTACA 2 cut(s) 2716, 4829
Bsp19I CCATGG 2 cut(s) 1963, 6132
BspDI ATCGAT 2 cut(s) 1410, 4763
BspEI TCCGGA 1 cut(s) 2074
BspFNI CGCG 4 cut(s) 274, 289, 5677, 6015
BspHI TCATGA 2 cut(s) 478, 2365
BspMAI CTGCAG 8 cut(s) 1145, 1954, 2401, 2614, 2728, 3292, 4746, 5685
BspMI ACCTGC 4 cut(s) 3562, 5984, 6071, 6370
BspOI GCTAGC 1 cut(s) 5954
BspQI GCTCTTC 1 cut(s) 6070
BspT104I TTCGAA 2 cut(s) 15, 5429
BspT107I GGYRCC 2 cut(s) 3511, 4142
BspTNI GGTCTC 3 cut(s) 1692, 2527, 4252
BsrBI CCGCTC 1 cut(s) 111
BsrDI GCAATG 9 cut(s) 60, 363, 1199, 2892, 3687, 5082, 5310, 5600, 6115
BsrFI RCCGGY 3 cut(s) 83, 427, 2471
BsrGI TGTACA 2 cut(s) 2716, 4829
BssAI RCCGGY 3 cut(s) 83, 427, 2471
BssHII GCGCGC 1 cut(s) 5675
BssNI GRCGYC 3 cut(s) 99, 4738, 5116
BssSI CACGAG 5 cut(s) 1530, 1536, 4310, 5070, 5460
BssT1I CCWWGG 7 cut(s) 138, 1963, 2143, 2739, 4547, 5196, 6132
Bst2BI CACGAG 5 cut(s) 1530, 1536, 4310, 5070, 5460
Bst2UI CCWGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
Bst6I CTCTTC 1 cut(s) 6070
BstACI GRCGYC 3 cut(s) 99, 4738, 5116
BstAUI TGTACA 2 cut(s) 2716, 4829
BstBAI YACGTR 6 cut(s) 62, 91, 746, 917, 5016, 6209
BstBI TTCGAA 2 cut(s) 15, 5429
BstDSI CCRYGG 3 cut(s) 287, 1963, 6132
BstENI CCTNNNNNAGG 1 cut(s) 5200
BstFNI CGCG 4 cut(s) 274, 289, 5677, 6015
BstH2I RGCGCY 1 cut(s) 287
BstHHI GCGC 4 cut(s) 286, 5677, 5679, 6115
BstMCI CGRYCG 1 cut(s) 6005
BstNI CCWGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
BstNSI RCATGY 5 cut(s) 1109, 1388, 1401, 1867, 2885
BstSCI CCNGG 9 cut(s) 1436, 1524, 1590, 3116, 3909, 4960, 5909, 6325, 6374
BstSLI GKGCMC 1 cut(s) 1429
BstUI CGCG 4 cut(s) 274, 289, 5677, 6015
BstV2I GAAGAC 7 cut(s) 654, 1029, 2018, 2051, 2697, 3440, 5739
BstXI CCANNNNNNTGG 4 cut(s) 1915, 2740, 6353, 6382
Bsu15I ATCGAT 2 cut(s) 1410, 4763
BsuI GTATCC 3 cut(s) 315, 2988, 3003
BsuTUI ATCGAT 2 cut(s) 1410, 4763
BtgI CCRYGG 3 cut(s) 287, 1963, 6132
BtgZI GCGATG 1 cut(s) 3063
BtrI CACGTC 1 cut(s) 5774
BtsI GCAGTG 5 cut(s) 1092, 1776, 2834, 4653, 6238
BveI ACCTGC 4 cut(s) 3562, 5984, 6071, 6370
CaiI CAGNNNCTG 3 cut(s) 404, 4608, 5401
CciI TCATGA 2 cut(s) 478, 2365
CfoI GCGC 4 cut(s) 286, 5677, 5679, 6115
Cfr10I RCCGGY 3 cut(s) 83, 427, 2471
Cfr42I CCGCGG 1 cut(s) 290
ClaI ATCGAT 2 cut(s) 1410, 4763
CseI GACGC 4 cut(s) 107, 1113, 4727, 6021
CspAI ACCGGT 2 cut(s) 427, 2471
CspCI CAANNNNNGTGG 2 cut(s) 2987, 3022
DraI TTTAAA 2 cut(s) 2953, 3618
DraIII CACNNNGTG 1 cut(s) 324
DrdI GACNNNNNNGTC 2 cut(s) 3302, 5778
DriI GACNNNNNGTC 2 cut(s) 1174, 6304
DseDI GACNNNNNNGTC 2 cut(s) 3302, 5778
EaeI YGGCCR 2 cut(s) 3551, 4897
Eam1104I CTCTTC 1 cut(s) 6070
Eam1105I GACNNNNNGTC 2 cut(s) 1174, 6304
EarI CTCTTC 1 cut(s) 6070
Ecl136II GAGCTC 2 cut(s) 2296, 3283
Eco130I CCWWGG 7 cut(s) 138, 1963, 2143, 2739, 4547, 5196, 6132
Eco147I AGGCCT 1 cut(s) 4782
Eco24I GRGCYC 2 cut(s) 2298, 3285
Eco31I GGTCTC 3 cut(s) 1692, 2527, 4252
Eco32I GATATC 4 cut(s) 1588, 2643, 5257, 5869
Eco47I GGWCC 8 cut(s) 120, 1176, 2114, 3379, 4172, 5192, 5398, 5479
Eco53kI GAGCTC 2 cut(s) 2296, 3283
Eco72I CACGTG 3 cut(s) 62, 91, 6209
Eco88I CYCGRG 2 cut(s) 35, 6045
EcoICRI GAGCTC 2 cut(s) 2296, 3283
EcoNI CCTNNNNNAGG 1 cut(s) 5200
EcoO109I RGGNCCY 3 cut(s) 5192, 5398, 5479
EcoRI GAATTC 2 cut(s) 4325, 4535
EcoRII CCWGG 9 cut(s) 1436, 1524, 1590, 3116, 3909, 4960, 5909, 6325, 6374
EcoRV GATATC 4 cut(s) 1588, 2643, 5257, 5869
EcoT14I CCWWGG 7 cut(s) 138, 1963, 2143, 2739, 4547, 5196, 6132
EcoT22I ATGCAT 4 cut(s) 489, 2814, 5053, 5602
EcoT38I GRGCYC 2 cut(s) 2298, 3285
ErhI CCWWGG 7 cut(s) 138, 1963, 2143, 2739, 4547, 5196, 6132
Esp3I CGTCTC 3 cut(s) 245, 2975, 5764
FalI AAGNNNNNCTT 6 cut(s) 1219, 1251, 2574, 2606, 5495, 5527
FaqI GGGAC 6 cut(s) 52, 1203, 1889, 5205, 6151, 6416
FauI CCCGC 3 cut(s) 279, 285, 1669
FauNDI CATATG 1 cut(s) 1578
FbaI TGATCA 3 cut(s) 1042, 3373, 3595
FblI GTMKAC 4 cut(s) 3294, 3920, 4988, 6409
FriOI GRGCYC 2 cut(s) 2298, 3285
FspI TGCGCA 1 cut(s) 6114
GlaI GCGC 4 cut(s) 285, 5676, 5678, 6114
GsaI CCCAGC 2 cut(s) 4612, 4841
GsuI CTGGAG 1 cut(s) 972
HaeII RGCGCY 1 cut(s) 287
HapII CCGG 5 cut(s) 84, 428, 986, 2075, 2472
HgaI GACGC 4 cut(s) 107, 1113, 4727, 6021
HhaI GCGC 4 cut(s) 286, 5677, 5679, 6115
Hin1I GRCGYC 3 cut(s) 99, 4738, 5116
Hin6I GCGC 4 cut(s) 284, 5675, 5677, 6113
HinP1I GCGC 4 cut(s) 284, 5675, 5677, 6113
HincII GTYRAC 3 cut(s) 436, 4989, 5440
HindII GTYRAC 3 cut(s) 436, 4989, 5440
HindIII AAGCTT 4 cut(s) 2757, 3447, 4109, 4358
HpaI GTTAAC 1 cut(s) 436
HpaII CCGG 5 cut(s) 84, 428, 986, 2075, 2472
HphI GGTGA 7 cut(s) 1952, 2728, 4950, 5212, 5393, 5604, 6284
Hpy99I CGWCG 6 cut(s) 76, 101, 3006, 3821, 5118, 6015
Hsp92I GRCGYC 3 cut(s) 99, 4738, 5116
HspAI GCGC 4 cut(s) 284, 5675, 5677, 6113
KflI GGGWCCC 1 cut(s) 5192
Kpn2I TCCGGA 1 cut(s) 2074
KpnI GGTACC 1 cut(s) 3515
Ksp22I TGATCA 3 cut(s) 1042, 3373, 3595
KspAI GTTAAC 1 cut(s) 436
KspI CCGCGG 1 cut(s) 290
LguI GCTCTTC 1 cut(s) 6070
MbiI CCGCTC 1 cut(s) 111
MfeI CAATTG 1 cut(s) 1278
MhlI GDGCHC 9 cut(s) 96, 1429, 1516, 1537, 2298, 3285, 3672, 4489, 5415
MlsI TGGCCA 2 cut(s) 3553, 4899
MluNI TGGCCA 2 cut(s) 3553, 4899
MmeI TCCRAC 7 cut(s) 2293, 2952, 3158, 3840, 4364, 5556, 6268
Mox20I TGGCCA 2 cut(s) 3553, 4899
Mph1103I ATGCAT 4 cut(s) 489, 2814, 5053, 5602
MroI TCCGGA 1 cut(s) 2074
MroXI GAANNNNTTC 4 cut(s) 874, 3340, 3589, 5469
MscI TGGCCA 2 cut(s) 3553, 4899
MslI CAYNNNNRTG 3 cut(s) 1350, 1581, 4201
Msp20I TGGCCA 2 cut(s) 3553, 4899
MspA1I CMGCKG 5 cut(s) 289, 1664, 3250, 5852, 6187
MspI CCGG 5 cut(s) 84, 428, 986, 2075, 2472
MspR9I CCNGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
MunI CAATTG 1 cut(s) 1278
Mva1269I GAATGC 3 cut(s) 4082, 5172, 5700
MvaI CCWGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
MvnI CGCG 4 cut(s) 274, 289, 5677, 6015
NcoI CCATGG 2 cut(s) 1963, 6132
NdeI CATATG 1 cut(s) 1578
NheI GCTAGC 1 cut(s) 5950
NsbI TGCGCA 1 cut(s) 6114
NsiI ATGCAT 4 cut(s) 489, 2814, 5053, 5602
NspI RCATGY 5 cut(s) 1109, 1388, 1401, 1867, 2885
NspV TTCGAA 2 cut(s) 15, 5429
PaeR7I CTCGAG 1 cut(s) 35
PagI TCATGA 2 cut(s) 478, 2365
PaqCI CACCTGC 2 cut(s) 5984, 6370
PauI GCGCGC 1 cut(s) 5675
PceI AGGCCT 1 cut(s) 4782
PciI ACATGT 2 cut(s) 1105, 2881
PciSI GCTCTTC 1 cut(s) 6070
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PctI GAATGC 3 cut(s) 4082, 5172, 5700
PdmI GAANNNNTTC 4 cut(s) 874, 3340, 3589, 5469
PflFI GACNNNGTC 1 cut(s) 5738
PflMI CCANNNNNTGG 2 cut(s) 144, 2498
PinAI ACCGGT 2 cut(s) 427, 2471
PmaCI CACGTG 3 cut(s) 62, 91, 6209
PmlI CACGTG 3 cut(s) 62, 91, 6209
Ppu21I YACGTR 6 cut(s) 62, 91, 746, 917, 5016, 6209
PpuMI RGGWCCY 3 cut(s) 5192, 5398, 5479
PscI ACATGT 2 cut(s) 1105, 2881
PshBI ATTAAT 1 cut(s) 1752
PsiI TTATAA 1 cut(s) 2276
Psp124BI GAGCTC 2 cut(s) 2298, 3285
Psp5II RGGWCCY 3 cut(s) 5192, 5398, 5479
Psp6I CCWGG 9 cut(s) 1436, 1524, 1590, 3116, 3909, 4960, 5909, 6325, 6374
PspCI CACGTG 3 cut(s) 62, 91, 6209
PspFI CCCAGC 2 cut(s) 4608, 4837
PspGI CCWGG 9 cut(s) 1436, 1524, 1590, 3116, 3909, 4960, 5909, 6325, 6374
PspPPI RGGWCCY 3 cut(s) 5192, 5398, 5479
PsrI GAACNNNNNNTAC 2 cut(s) 570, 602
PstI CTGCAG 8 cut(s) 1145, 1954, 2401, 2614, 2728, 3292, 4746, 5685
PstNI CAGNNNCTG 3 cut(s) 404, 4608, 5401
PsyI GACNNNGTC 1 cut(s) 5738
PteI GCGCGC 1 cut(s) 5675
PvuII CAGCTG 3 cut(s) 3250, 5852, 6187
RseI CAYNNNNRTG 3 cut(s) 1350, 1581, 4201
SacI GAGCTC 2 cut(s) 2298, 3285
SacII CCGCGG 1 cut(s) 290
SalI GTCGAC 1 cut(s) 4987
SapI GCTCTTC 1 cut(s) 6070
ScaI AGTACT 3 cut(s) 2094, 2915, 5458
ScrFI CCNGG 9 cut(s) 1438, 1526, 1592, 3118, 3911, 4962, 5911, 6327, 6376
SduI GDGCHC 9 cut(s) 96, 1429, 1516, 1537, 2298, 3285, 3672, 4489, 5415
Sfr274I CTCGAG 1 cut(s) 35
Sfr303I CCGCGG 1 cut(s) 290
SfuI TTCGAA 2 cut(s) 15, 5429
SgrAI CRCCGGYG 1 cut(s) 2471
SgrBI CCGCGG 1 cut(s) 290
SinI GGWCC 8 cut(s) 120, 1176, 2114, 3379, 4172, 5192, 5398, 5479
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 3 cut(s) 1350, 1581, 4201
SmlI CTYRAG 9 cut(s) 35, 542, 1446, 2603, 3650, 4447, 4488, 4793, 5894
SmoI CTYRAG 9 cut(s) 35, 542, 1446, 2603, 3650, 4447, 4488, 4793, 5894
SseBI AGGCCT 1 cut(s) 4782
SspI AATATT 4 cut(s) 4008, 4279, 5290, 5789
SstI GAGCTC 2 cut(s) 2298, 3285
StuI AGGCCT 1 cut(s) 4782
StyD4I CCNGG 9 cut(s) 1436, 1524, 1590, 3116, 3909, 4960, 5909, 6325, 6374
StyI CCWWGG 7 cut(s) 138, 1963, 2143, 2739, 4547, 5196, 6132
TauI GCSGC 3 cut(s) 289, 292, 330
TspGWI ACGGA 7 cut(s) 1747, 1751, 3077, 4876, 5717, 6087, 6406
Tth111I GACNNNGTC 1 cut(s) 5738
Van91I CCANNNNNTGG 2 cut(s) 144, 2498
VneI GTGCAC 1 cut(s) 1425
VpaK11BI GGWCC 8 cut(s) 120, 1176, 2114, 3379, 4172, 5192, 5398, 5479
VspI ATTAAT 1 cut(s) 1752
XagI CCTNNNNNAGG 1 cut(s) 5200
XapI RAATTY 7 cut(s) 419, 2309, 2817, 3097, 4325, 4535, 4658
XbaI TCTAGA 3 cut(s) 1483, 4561, 6359
XceI RCATGY 5 cut(s) 1109, 1388, 1401, 1867, 2885
XcmI CCANNNNNNNNNTGG 5 cut(s) 1352, 3114, 4731, 4907, 6382
XhoI CTCGAG 1 cut(s) 35
XmiI GTMKAC 4 cut(s) 3294, 3920, 4988, 6409
XmnI GAANNNNTTC 4 cut(s) 874, 3340, 3589, 5469
ZraI GACGTC 1 cut(s) 5117
ZrmI AGTACT 3 cut(s) 2094, 2915, 5458
Zsp2I ATGCAT 4 cut(s) 489, 2814, 5053, 5602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.