Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001091

Physical Location & Seq

Genomic Coordinates Forward (+)

22758645 .. 22761655

Gene Structure 3011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G186600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGAAAGTCCTATTTTGGGATGTGCAGAGCACTCAAGAAATCCAATCATCAAGTCAAGTTATACATGATTCACAAGGTGAAGTCAAAAACCAAACTACCGAGGCTCCTGCAACGGATTCAGCTTCTGTATCCACTTCAGGCAATGACAGTAAGAAAGTATCACGTCAAGATATCGAACTTGTCCAGAATCTAATAGAGCGGTGTTTACAATTATATATGAATAGAGATGAGGTAGTTAAAACCCTCTTGACTCGCGCAAGGATAGATCCTGGATTTACAACTTTGGTATGGCAGAAGTTGGAAGAAGAAAATGCGGACTTTTTCAGGGCTTATTACATAAGGCTAAAACTGAAAAAACAAATCCTCCTGTTCAATCATCTACTGGAGCATCATTATCATCTCTCAAAGTATAATCCCATGTCTCCAAAGGTTCCTTTGGCCCCTATACAAAATGGGATTCATCCAATGCCTGTTAACAACTTACCAATGGGATACCCTGTCCTTCAGCAACCTCCAATGCCAGCAGCAGGTCAACCCCATCTTGATTCCATGGGCTGTGGAATATCTACTGTCATTATGATGATGGACTGCAGCGGTGCTGATGTGGTTCCTGTCATTCCACCAAACAGTGCCATGTCATCCATGTCAGAGATTCCTGTAAGTCCTACATCAGTTGCATCCAGTGGTCACTTCCCATTCTCCGCGTCAGACATATCAGGAATTGGAGTAGACACATCAACACTTGATACAACATTTACATCTGATGTGGCAAGTTCTGTTGGGTTGCAACTTGCACCTGATGGCGGGGCTGGAAATTCTCGGGATTCTCTCAGATCACTGGACCAGATTCAGTGGAATTTCAGCCTATCAGATCTTACAGCAGATTTGTCAAACTTGGGAGATTTAGGAGCCTTAGGAAACTATCCTGGTTCCCCCTTTCTGCCGTCTGATTCGGAAATTTTACTCGACTCTCCAGAGCAAGAGGGTATAGTGGAGGAGTTCTTTGTTGATTCTGTCCCCGGGCCACCGTGCTCTCAATCAGACGAGGAGAAACCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

A_thal_3526

Protein Analysis

353

Amino Acids

38.25

Weight (kDa)

4.54

Isoelectric Point (pI)

61.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46420 AT2G46420 AT2G46420 AT3G61700 AT3G61700 AT3G61700 AT3G61700
fragaria_vesca	FvH4_7g16290 FvH4_7g16290 FvH4_7g16290 FvH4_7g31180 FvH4_7g31180 FvH4_7g31180 FvH4_7g31180
malus_domestica	MD01G1079500.v1.1 MD01G1216500.v1.1 MD07G1148300.v1.1 MD07G1286500.v1.1 MD12G1148300.v1.1
prunus_persica	Prupe.2G186600_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1 Prupe.2G308500_v2.0.a1
pyrus_communis	pycom01g10780 pycom01g22720 pycom07g14730 pycom07g25960
rosa_chinensis	RchiOBHm_Chr1g0359301 RchiOBHm_Chr1g0380221
rosa_laevigata	RLG00000026317 RLG00000027882
rosa_multiflora	Rmu_co8458617.1_g000001 Rmu_sc0001232.1_g000028 Rmu_sc0002689.1_g000001 Rmu_ssc0000135.1_g000052
rosa_roxburghii	Rroxscaffold_4G00279550 Rroxscaffold_4G00297130
rosa_rugosa	Rorug01G0269300 Rorug01G0269400 Rorug01G0419200
rosa_samantha	Rh1AG283300 Rh1AG444000 Rh1BG249500 Rh1BG399100 Rh1CG267400 Rh1CG412500 Rh1DG278400 Rh1DG429600
rosa_wichuraiana	Rw1G025150 Rw1G038560 Rw1G038630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	518
AccBSI	CCGCTC	1 cut(s)	199
AccI	GTMKAC	1 cut(s)	729
AccII	CGCG	2 cut(s)	255, 704
AciI	CCGC	5 cut(s)	199, 314, 594, 702, 804
AclWI	GGATC	1 cut(s)	260
AcsI	RAATTY	3 cut(s)	814, 856, 957
AcuI	CTGAAG	2 cut(s)	120, 488
AdeI	CACNNNGTG	1 cut(s)	77
AfiI	CCNNNNNNNGG	3 cut(s)	16, 527, 803
AgsI	TTSAA	1 cut(s)	373
AjiI	CACGTC	1 cut(s)	164
AjnI	CCWGG	2 cut(s)	268, 925
AluBI	AGCT	1 cut(s)	122
AluI	AGCT	1 cut(s)	122
Alw21I	GWGCWC	2 cut(s)	32, 1034
Alw26I	GTCTC	1 cut(s)	426
AlwI	GGATC	1 cut(s)	260
AlwNI	CAGNNNCTG	1 cut(s)	125
Ama87I	CYCGRG	2 cut(s)	819, 1019
AoxI	GGCC	2 cut(s)	438, 1022
ApeKI	GCWGC	2 cut(s)	524, 591
ApoI	RAATTY	3 cut(s)	814, 856, 957
AspLEI	GCGC	1 cut(s)	257
AspS9I	GGNCC	3 cut(s)	439, 841, 1022
AsuC2I	CCSGG	2 cut(s)	1020, 1021
AsuHPI	GGTGA	1 cut(s)	89
AvaI	CYCGRG	2 cut(s)	819, 1019
AvaII	GGWCC	1 cut(s)	841
AxyI	CCTNAGG	1 cut(s)	913
Bbv12I	GWGCWC	2 cut(s)	32, 1034
BbvI	GCAGC	2 cut(s)	536, 603
BccI	CCATC	3 cut(s)	546, 577, 794
BceAI	ACGGC	1 cut(s)	928
BcgI	CGANNNNNNTGC	2 cut(s)	89, 123
BciT130I	CCWGG	2 cut(s)	270, 927
BciVI	GTATCC	2 cut(s)	139, 485
BcnI	CCSGG	2 cut(s)	1020, 1021
BcoDI	GTCTC	1 cut(s)	426
BfaI	CTAG	1 cut(s)	1057
BfmI	CTRYAG	1 cut(s)	589
BfuAI	ACCTGC	1 cut(s)	518
BfuI	GTATCC	2 cut(s)	139, 485
BglII	AGATCT	1 cut(s)	871
BisI	GCNGC	2 cut(s)	525, 592
BlsI	GCNGC	2 cut(s)	526, 593
Bme1390I	CCNGG	4 cut(s)	270, 927, 1020, 1021
Bme18I	GGWCC	1 cut(s)	841
BmeT110I	CYCGRG	2 cut(s)	819, 1019
BmgBI	CACGTC	1 cut(s)	164
BmgT120I	GGNCC	3 cut(s)	439, 841, 1022
BmiI	GGNNCC	6 cut(s)	105, 432, 441, 609, 910, 931
BmrFI	CCNGG	4 cut(s)	270, 927, 1020, 1021
BmsI	GCATC	2 cut(s)	397, 686
BpmI	CTGGAG	2 cut(s)	404, 957
BpuEI	CTTGAG	1 cut(s)	18
BpuMI	CCSGG	2 cut(s)	1020, 1021
BsaJI	CCNNGG	4 cut(s)	99, 549, 1018, 1019
BsaXI	ACNNNNNCTCC	4 cut(s)	88, 118, 348, 378
Bsc4I	CCNNNNNNNGG	3 cut(s)	16, 527, 803
Bse1I	ACTGG	3 cut(s)	387, 681, 843
Bse21I	CCTNAGG	1 cut(s)	913
Bse3DI	GCAATG	1 cut(s)	148
BseBI	CCWGG	2 cut(s)	270, 927
BseDI	CCNNGG	4 cut(s)	99, 549, 1018, 1019
BseGI	GGATG	4 cut(s)	25, 460, 638, 677
BseLI	CCNNNNNNNGG	3 cut(s)	16, 527, 803
BseMI	GCAATG	1 cut(s)	148
BseMII	CTCAG	1 cut(s)	844
BseNI	ACTGG	3 cut(s)	387, 681, 843
BseRI	GAGGAG	1 cut(s)	1010
BseXI	GCAGC	2 cut(s)	536, 603
BsgI	GTGCAG	1 cut(s)	44
Bsh1236I	CGCG	2 cut(s)	255, 704
BshFI	GGCC	2 cut(s)	440, 1024
BsiHKAI	GWGCWC	2 cut(s)	32, 1034
BsiHKCI	CYCGRG	2 cut(s)	819, 1019
BsiSI	CCGG	1 cut(s)	1020
BslFI	GGGAC	1 cut(s)	1001
BslI	CCNNNNNNNGG	3 cut(s)	16, 527, 803
BsmAI	GTCTC	1 cut(s)	426
BsmFI	GGGAC	1 cut(s)	1001
BsnI	GGCC	2 cut(s)	440, 1024
BsoBI	CYCGRG	2 cut(s)	819, 1019
Bsp1286I	GDGCHC	2 cut(s)	32, 1034
Bsp143I	GATC	3 cut(s)	265, 833, 871
Bsp19I	CCATGG	1 cut(s)	549
BspACI	CCGC	5 cut(s)	199, 314, 594, 702, 804
BspANI	GGCC	2 cut(s)	440, 1024
BspCNI	CTCAG	1 cut(s)	843
BspFNI	CGCG	2 cut(s)	255, 704
BspLI	GGNNCC	6 cut(s)	105, 432, 441, 609, 910, 931
BspMAI	CTGCAG	1 cut(s)	593
BspMI	ACCTGC	1 cut(s)	518
BspPI	GGATC	1 cut(s)	260
BsrBI	CCGCTC	1 cut(s)	199
BsrDI	GCAATG	1 cut(s)	148
BsrI	ACTGG	3 cut(s)	387, 681, 843
BssECI	CCNNGG	4 cut(s)	99, 549, 1018, 1019
BssMI	GATC	3 cut(s)	265, 833, 871
BssT1I	CCWWGG	1 cut(s)	549
Bst2UI	CCWGG	2 cut(s)	270, 927
Bst4CI	ACNGT	4 cut(s)	149, 571, 629, 1029
BstC8I	GCNNGC	1 cut(s)	522
BstDEI	CTNAG	2 cut(s)	830, 913
BstDSI	CCRYGG	1 cut(s)	549
BstF5I	GGATG	4 cut(s)	25, 460, 638, 677
BstFNI	CGCG	2 cut(s)	255, 704
BstHHI	GCGC	1 cut(s)	257
BstKTI	GATC	3 cut(s)	268, 836, 874
BstMAI	GTCTC	1 cut(s)	426
BstMBI	GATC	3 cut(s)	265, 833, 871
BstNI	CCWGG	2 cut(s)	270, 927
BstSCI	CCNGG	4 cut(s)	268, 925, 1018, 1019
BstSFI	CTRYAG	1 cut(s)	589
BstUI	CGCG	2 cut(s)	255, 704
BstV1I	GCAGC	2 cut(s)	536, 603
BstX2I	RGATCY	2 cut(s)	265, 871
BstYI	RGATCY	2 cut(s)	265, 871
Bsu36I	CCTNAGG	1 cut(s)	913
BsuI	GTATCC	2 cut(s)	139, 485
BsuRI	GGCC	2 cut(s)	440, 1024
BtgI	CCRYGG	1 cut(s)	549
BtrI	CACGTC	1 cut(s)	164
BtsCI	GGATG	4 cut(s)	25, 460, 638, 677
BtsIMutI	CAGTG	4 cut(s)	634, 688, 836, 857
BveI	ACCTGC	1 cut(s)	518
Cac8I	GCNNGC	1 cut(s)	522
CaiI	CAGNNNCTG	1 cut(s)	125
CfoI	GCGC	1 cut(s)	257
Cfr13I	GGNCC	3 cut(s)	439, 841, 1022
Cfr9I	CCCGGG	1 cut(s)	1019
CseI	GACGC	1 cut(s)	693
CviAII	CATG	5 cut(s)	65, 418, 550, 634, 643
DdeI	CTNAG	2 cut(s)	830, 913
DpnI	GATC	3 cut(s)	267, 835, 873
DpnII	GATC	3 cut(s)	265, 833, 871
DraIII	CACNNNGTG	1 cut(s)	77
Eco130I	CCWWGG	1 cut(s)	549
Eco32I	GATATC	1 cut(s)	172
Eco47I	GGWCC	1 cut(s)	841
Eco57I	CTGAAG	2 cut(s)	120, 488
Eco81I	CCTNAGG	1 cut(s)	913
Eco88I	CYCGRG	2 cut(s)	819, 1019
EcoRII	CCWGG	2 cut(s)	268, 925
EcoRV	GATATC	1 cut(s)	172
EcoT14I	CCWWGG	1 cut(s)	549
ErhI	CCWWGG	1 cut(s)	549
FaeI	CATG	5 cut(s)	68, 421, 553, 637, 646
FaqI	GGGAC	1 cut(s)	1001
FatI	CATG	5 cut(s)	64, 417, 549, 633, 642
FauI	CCCGC	1 cut(s)	797
FblI	GTMKAC	1 cut(s)	729
Fnu4HI	GCNGC	2 cut(s)	525, 592
FokI	GGATG	4 cut(s)	32, 447, 625, 664
Fsp4HI	GCNGC	2 cut(s)	525, 592
FspBI	CTAG	1 cut(s)	1057
GlaI	GCGC	1 cut(s)	256
GluI	GCNGC	2 cut(s)	525, 592
GsuI	CTGGAG	2 cut(s)	404, 957
HaeIII	GGCC	2 cut(s)	440, 1024
HapII	CCGG	1 cut(s)	1020
HgaI	GACGC	1 cut(s)	693
HhaI	GCGC	1 cut(s)	257
Hin1II	CATG	5 cut(s)	68, 421, 553, 637, 646
Hin6I	GCGC	1 cut(s)	255
HinP1I	GCGC	1 cut(s)	255
HincII	GTYRAC	2 cut(s)	475, 533
HindII	GTYRAC	2 cut(s)	475, 533
HpaI	GTTAAC	1 cut(s)	475
HpaII	CCGG	1 cut(s)	1020
HphI	GGTGA	1 cut(s)	89
Hpy166II	GTNNAC	4 cut(s)	206, 475, 533, 730
Hpy188I	TCNGA	8 cut(s)	649, 709, 763, 833, 871, 949, 955, 1042
Hpy188III	TCNNGA	8 cut(s)	35, 167, 184, 247, 542, 717, 821, 974
Hpy8I	GTNNAC	4 cut(s)	206, 475, 533, 730
HpyAV	CCTTC	1 cut(s)	512
HpyCH4III	ACNGT	4 cut(s)	149, 571, 629, 1029
HpyCH4IV	ACGT	1 cut(s)	163
HpyCH4V	TGCA	6 cut(s)	25, 110, 591, 677, 787, 794
HpyF3I	CTNAG	2 cut(s)	830, 913
HpySE526I	ACGT	1 cut(s)	163
Hsp92II	CATG	5 cut(s)	68, 421, 553, 637, 646
HspAI	GCGC	1 cut(s)	255
KspAI	GTTAAC	1 cut(s)	475
Kzo9I	GATC	3 cut(s)	265, 833, 871
LmnI	GCTCC	3 cut(s)	109, 385, 908
Lsp1109I	GCAGC	2 cut(s)	536, 603
LweI	GCATC	2 cut(s)	397, 686
MaeI	CTAG	1 cut(s)	1057
MaeII	ACGT	1 cut(s)	163
MaeIII	GTNAC	1 cut(s)	686
MalI	GATC	3 cut(s)	267, 835, 873
MbiI	CCGCTC	1 cut(s)	199
MboI	GATC	3 cut(s)	265, 833, 871
MboII	GAAGA	2 cut(s)	314, 317
MflI	RGATCY	2 cut(s)	265, 871
MhlI	GDGCHC	2 cut(s)	32, 1034
MluCI	AATT	5 cut(s)	209, 720, 814, 856, 957
MlyI	GAGTC	2 cut(s)	244, 962
MmeI	TCCRAC	1 cut(s)	279
MnlI	CCTC	8 cut(s)	94, 223, 254, 374, 522, 976, 988, 1039
MseI	TTAA	2 cut(s)	237, 474
MslI	CAYNNNNRTG	1 cut(s)	578
MspA1I	CMGCKG	1 cut(s)	594
MspI	CCGG	1 cut(s)	1020
MspR9I	CCNGG	4 cut(s)	270, 927, 1020, 1021
MvaI	CCWGG	2 cut(s)	270, 927
MvnI	CGCG	2 cut(s)	255, 704
NciI	CCSGG	2 cut(s)	1020, 1021
NcoI	CCATGG	1 cut(s)	549
NdeII	GATC	3 cut(s)	265, 833, 871
NlaIII	CATG	5 cut(s)	68, 421, 553, 637, 646
NlaIV	GGNNCC	6 cut(s)	105, 432, 441, 609, 910, 931
NmuCI	GTSAC	1 cut(s)	686
PfoI	TCCNGGA	1 cut(s)	268
PkrI	GCNGC	2 cut(s)	526, 593
PleI	GAGTC	2 cut(s)	244, 962
PpsI	GAGTC	2 cut(s)	244, 962
Psp6I	CCWGG	2 cut(s)	268, 925
PspGI	CCWGG	2 cut(s)	268, 925
PspN4I	GGNNCC	6 cut(s)	105, 432, 441, 609, 910, 931
PspPI	GGNCC	3 cut(s)	439, 841, 1022
PstI	CTGCAG	1 cut(s)	593
PstNI	CAGNNNCTG	1 cut(s)	125
PsuI	RGATCY	2 cut(s)	265, 871
RseI	CAYNNNNRTG	1 cut(s)	578
SaqAI	TTAA	2 cut(s)	237, 474
SatI	GCNGC	2 cut(s)	525, 592
Sau3AI	GATC	3 cut(s)	265, 833, 871
Sau96I	GGNCC	3 cut(s)	439, 841, 1022
SchI	GAGTC	2 cut(s)	244, 962
ScrFI	CCNGG	4 cut(s)	270, 927, 1020, 1021
SduI	GDGCHC	2 cut(s)	32, 1034
SetI	ASST	8 cut(s)	79, 124, 166, 234, 432, 514, 532, 799
SfaNI	GCATC	2 cut(s)	397, 686
SfcI	CTRYAG	1 cut(s)	589
SinI	GGWCC	1 cut(s)	841
SmaI	CCCGGG	1 cut(s)	1021
SmiMI	CAYNNNNRTG	1 cut(s)	578
SmlI	CTYRAG	1 cut(s)	33
SmoI	CTYRAG	1 cut(s)	33
Sse9I	AATT	5 cut(s)	209, 720, 814, 856, 957
SsiI	CCGC	5 cut(s)	199, 314, 594, 702, 804
SspMI	CTAG	1 cut(s)	1057
StyD4I	CCNGG	4 cut(s)	268, 925, 1018, 1019
StyI	CCWWGG	1 cut(s)	549
TaaI	ACNGT	4 cut(s)	149, 571, 629, 1029
TaiI	ACGT	1 cut(s)	166
TaqI	TCGA	2 cut(s)	174, 966
TasI	AATT	5 cut(s)	209, 720, 814, 856, 957
Tru1I	TTAA	2 cut(s)	237, 474
Tru9I	TTAA	2 cut(s)	237, 474
TscAI	CASTG	4 cut(s)	634, 688, 843, 857
TseFI	GTSAC	1 cut(s)	686
TseI	GCWGC	2 cut(s)	524, 591
Tsp45I	GTSAC	1 cut(s)	686
TspDTI	ATGAA	3 cut(s)	17, 233, 449
TspGWI	ACGGA	1 cut(s)	128
TspMI	CCCGGG	1 cut(s)	1019
TspRI	CASTG	4 cut(s)	634, 688, 843, 857
VpaK11BI	GGWCC	1 cut(s)	841
XapI	RAATTY	3 cut(s)	814, 856, 957
XmaI	CCCGGG	1 cut(s)	1019
XmiI	GTMKAC	1 cut(s)	729
XspI	CTAG	1 cut(s)	1057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.